Rw0G008530

oligopeptide transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00323
OG0003716
Physical Location & Seq
Reverse (-)
55810 .. 59308
3499 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G008530.1

Sequence Viewer

Length: 1950 bp
ATGTGGACCCTAGGGATCCTCTCCTGCGTCCTCCTCTCCTTCCTCAACACCTTCTTCTCCTACCGCACCGAGCCCCTGATCATCACCATGATCACCGTACAGGTGGCGACATGCCCATCGGACGGTTCATGGCTAGGGTTACTGCCCACTAGGAAGTTTTCGATCGGGTCGATGGAGTTCTCGCTCAACCCGGGTCCCGGAACGGCTTATGCTGTTGGCATTGTCGATATAATTAAGGCATTTTATCACAGGAAGATATCGTTCTTGGCCAGTTGGCTTCTTGTCAATACCACACAGGCATTGGGGTATGGGTGGGCTGGAATTCTCCGAAAGTACGTGGTGGATCCGGAGAGATGTGTGGCCCTCTATGCCCTACACGAGAAAGACAACAAGCGAATGTCCAGAGCGAAATTCTTCTTAATTGCATTCATATGCAGCTTCTCTTGGTATGTTGTCCCAGGCTACCTTTTCCCAACTATGTCAACCATTTCATGGATTTGTTGGATATACCCCAAGTCAGTAACAGTGCACAAATTGCATCGGCATGCGTGGACTTGGTCCTCGTACCTTCAAAGCCCTTTGATTAGCCCTTTCTTTGCTACTGTCAATGTTGCAGTTGGCTATGTTGCTTTCATGTTTGTGATACTGCCAATTGCCTACTGGGGAGTCAATTTATACAATGCCAAGAACTTCCCAATCTTCTCTTCCCATTTGTTTGATGCCCAAGGTCAAGTATATAACACTTCAGCAATTGTGAATGACAAATTTCAAATTTACATGCCGGCGTATGAAAAACAAGGACGTGTAAACTTAAGTGTGTTTTTTGCTCTGACATATGGTATTGGTTTTGCGGCCATTATATCAACCCTCACTCACGTGGCCCTCTTCAATGGAAGGGAGATATATGAACAATTTCGAGCATCGAAGAAGGATGGAAAGGTAGACATACACACCAAATTGATGAGGAAATACAAGGACATACCTAACTGGTGGTTTCACCTTACTCTTTTGGTGTCATTTGGAATCGCTCTGGCACTATGCATTTTCATGAAAGATGAGATTCCAATGCCGTGGTGGGCACTCATTTTCGCTGCAGTCCTTGCATTAATTTTCACTCTTCCGGTCAGCATTATTACCGCCACAACAAATCAGACGCCGGGACTAAACATTATCACAGAGTACATCATGGGATTGATTTTACCCGGAAAACCGATTCTTAATGTATGCTTCAAAACCTATGGTTATATTAGCATGAGTCAGGCAATTTCCTTTCTCAATGATTTCAAGCTTGGCCATTACATGAAGATTCCGCCCAGATCAATGTTTTTAGTTCAGTTGATAGGAACTATTATAGCTGGAACAGTCAATATCGGGGTTGCGTGGTGGCTGTTATCTACTGTGGAAAACATATGTCAAGATCAATTACTCCCTCCTAATAGTCCTTGGACTTGTCCTGGTGATCGCGTCTTCTTTGATGCATCTGTCGTTTGGGGTCTTGTCGGTCCAAAGCGGATATTTGGTCCTCTTGGAAACTACCAAGCACTCAACTGGTTCTTCCTTATAGGTGCATTTGGACCACTCTTGGTATGGTTGTTGCACAGAGCTTTTCCCAGTTATAAATGGATTGGACTTATCAACCTTCCAGTGCTTTTAAATGCAACAGCTGCAATGCCACCGGCTACATCAGTAAACTTCAATTGCTGGATTGTTATTGGAACTATTTTCGGCTACTACATCTTTAGATATAGAACGGCATGGTGGCAGAGGTACAATTATGTTCTTTCGGCTGCCTTAGACGCTGGATTGGCTTGCATGGCGGTGCTCTTATACTTCACATTAACCATGAACGGGAAGAGCATATCTTGGTGGGGTGCGGATGGTGAACACTGTGAATTGGCTTCATGTCCCACAGCCAAAGGAATCGTTGTTGATGGTTGTCCTGTCTTCTAA

Protein Analysis

649

Amino Acids

73.21

Weight (kDa)

9.18

Isoelectric Point (pI)

29.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
OPT PF03169 1 - 612 2.6e-146 OPT oligopeptide transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1617
AccB7I CCANNNNNTGG 1 cut(s) 492
AccI GTMKAC 1 cut(s) 942
AccII CGCG 1 cut(s) 1464
AccIII TCCGGA 1 cut(s) 346
AciI CCGC 7 cut(s) 64, 851, 1137, 1310, 1510, 1817, 1874
AclWI GGATC 4 cut(s) 10, 23, 338, 351
AcoI YGGCCR 3 cut(s) 267, 852, 1291
AcsI RAATTY 4 cut(s) 321, 410, 764, 771
AcuI CTGAAG 1 cut(s) 729
AcvI CACGTG 1 cut(s) 877
AcyI GRCGYC 1 cut(s) 1154
AfaI GTAC 5 cut(s) 99, 335, 566, 1181, 1769
AfiI CCNNNNNNNGG 4 cut(s) 122, 197, 492, 1848
AflII CTTAAG 1 cut(s) 811
AflIII ACRYGT 1 cut(s) 802
AgsI TTSAA 6 cut(s) 572, 770, 889, 1231, 1285, 1696
AjiI CACGTC 1 cut(s) 803
AjnI CCWGG 2 cut(s) 457, 1453
AjuI GAANNNNNNNTTGG 2 cut(s) 688, 720
AleI CACNNNNGTG 1 cut(s) 875
AluBI AGCT 5 cut(s) 438, 1288, 1355, 1604, 1664
AluI AGCT 5 cut(s) 438, 1288, 1355, 1604, 1664
Alw21I GWGCWC 2 cut(s) 531, 1824
Alw44I GTGCAC 1 cut(s) 527
AlwI GGATC 4 cut(s) 10, 23, 338, 351
Ama87I CYCGRG 1 cut(s) 190
Aor13HI TCCGGA 1 cut(s) 346
AoxI GGCC 5 cut(s) 267, 360, 852, 879, 1291
ApaLI GTGCAC 1 cut(s) 527
ApeKI GCWGC 4 cut(s) 435, 1091, 1664, 1787
ApoI RAATTY 4 cut(s) 321, 410, 764, 771
AseI ATTAAT 1 cut(s) 1106
Asp700I GAANNNNTTC 2 cut(s) 413, 912
AspA2I CCTAGG 1 cut(s) 10
AspS9I GGNCC 8 cut(s) 6, 194, 361, 558, 880, 1502, 1520, 1574
AsuC2I CCSGG 5 cut(s) 191, 192, 198, 1158, 1203
AsuHPI GGTGA 5 cut(s) 76, 85, 989, 1469, 1892
AvaI CYCGRG 1 cut(s) 190
AvaII GGWCC 6 cut(s) 6, 194, 558, 1502, 1520, 1574
AvrII CCTAGG 1 cut(s) 10
BaeGI GKGCMC 2 cut(s) 531, 1081
BalI TGGCCA 2 cut(s) 269, 1293
BamHI GGATCC 2 cut(s) 15, 343
BanII GRGCYC 1 cut(s) 75
BauI CACGAG 1 cut(s) 377
BbrPI CACGTG 1 cut(s) 877
BbsI GAAGAC 2 cut(s) 1459, 1936
Bbv12I GWGCWC 2 cut(s) 531, 1824
BbvI GCAGC 4 cut(s) 447, 1078, 1651, 1774
BccI CCATC 5 cut(s) 124, 166, 926, 1871, 1925
BceAI ACGGC 3 cut(s) 219, 1054, 1767
BciT130I CCWGG 2 cut(s) 459, 1455
BclI TGATCA 2 cut(s) 78, 90
BcnI CCSGG 5 cut(s) 191, 192, 198, 1158, 1203
BfaI CTAG 3 cut(s) 11, 134, 150
BfmI CTRYAG 1 cut(s) 1092
BfrI CTTAAG 1 cut(s) 811
BisI GCNGC 5 cut(s) 436, 852, 1092, 1665, 1788
BlnI CCTAGG 1 cut(s) 10
BlsI GCNGC 5 cut(s) 437, 853, 1093, 1666, 1789
Bme1390I CCNGG 7 cut(s) 191, 192, 198, 459, 1158, 1203, 1455
Bme18I GGWCC 6 cut(s) 6, 194, 558, 1502, 1520, 1574
BmeT110I CYCGRG 1 cut(s) 190
BmgBI CACGTC 1 cut(s) 803
BmgT120I GGNCC 8 cut(s) 6, 194, 361, 558, 880, 1502, 1520, 1574
BmiI GGNNCC 5 cut(s) 8, 17, 195, 196, 345
BmrFI CCNGG 7 cut(s) 191, 192, 198, 459, 1158, 1203, 1455
BmrI ACTGGG 2 cut(s) 670, 1605
BmsI GCATC 5 cut(s) 547, 709, 929, 1465, 1487
BmuI ACTGGG 2 cut(s) 670, 1605
BpiI GAAGAC 2 cut(s) 1459, 1936
BpuMI CCSGG 5 cut(s) 191, 192, 198, 1158, 1203
BsaAI YACGTR 2 cut(s) 337, 877
BsaHI GRCGYC 1 cut(s) 1154
BsaJI CCNNGG 6 cut(s) 10, 190, 457, 724, 1070, 1442
BsaWI WCCGGW 2 cut(s) 346, 1120
Bsc4I CCNNNNNNNGG 4 cut(s) 122, 197, 492, 1848
Bse118I RCCGGY 2 cut(s) 781, 1675
Bse1I ACTGG 6 cut(s) 270, 665, 992, 1553, 1611, 1643
Bse3DI GCAATG 1 cut(s) 1674
BseAI TCCGGA 1 cut(s) 346
BseBI CCWGG 2 cut(s) 459, 1455
BseDI CCNNGG 6 cut(s) 10, 190, 457, 724, 1070, 1442
BseGI GGATG 2 cut(s) 937, 1882
BseLI CCNNNNNNNGG 4 cut(s) 122, 197, 492, 1848
BseMI GCAATG 1 cut(s) 1674
BseNI ACTGG 6 cut(s) 270, 665, 992, 1553, 1611, 1643
BseRI GAGGAG 1 cut(s) 23
BseSI GKGCMC 2 cut(s) 531, 1081
BseXI GCAGC 4 cut(s) 447, 1078, 1651, 1774
Bsh1236I CGCG 1 cut(s) 1464
Bsh1285I CGRYCG 1 cut(s) 165
BshFI GGCC 5 cut(s) 269, 362, 854, 881, 1293
BsiEI CGRYCG 1 cut(s) 165
BsiHKAI GWGCWC 2 cut(s) 531, 1824
BsiHKCI CYCGRG 1 cut(s) 190
BsiSI CCGG 8 cut(s) 191, 198, 347, 782, 1121, 1157, 1203, 1676
BslFI GGGAC 4 cut(s) 180, 440, 1173, 1890
BslI CCNNNNNNNGG 4 cut(s) 122, 197, 492, 1848
BsmFI GGGAC 4 cut(s) 180, 440, 1173, 1890
BsmI GAATGC 1 cut(s) 425
BsnI GGCC 5 cut(s) 269, 362, 854, 881, 1293
BsoBI CYCGRG 1 cut(s) 190
Bsp1286I GDGCHC 4 cut(s) 75, 531, 1081, 1824
Bsp13I TCCGGA 1 cut(s) 346
Bsp143I GATC 8 cut(s) 15, 78, 90, 162, 343, 1316, 1417, 1459
BspACI CCGC 7 cut(s) 64, 851, 1137, 1310, 1510, 1817, 1874
BspANI GGCC 5 cut(s) 269, 362, 854, 881, 1293
BspEI TCCGGA 1 cut(s) 346
BspFNI CGCG 1 cut(s) 1464
BspHI TCATGA 1 cut(s) 1047
BspLI GGNNCC 5 cut(s) 8, 17, 195, 196, 345
BspMAI CTGCAG 1 cut(s) 1096
BspPI GGATC 4 cut(s) 10, 23, 338, 351
BspQI GCTCTTC 1 cut(s) 1847
BspTI CTTAAG 1 cut(s) 811
BsrDI GCAATG 1 cut(s) 1674
BsrFI RCCGGY 2 cut(s) 781, 1675
BsrI ACTGG 6 cut(s) 270, 665, 992, 1553, 1611, 1643
BssAI RCCGGY 2 cut(s) 781, 1675
BssECI CCNNGG 6 cut(s) 10, 190, 457, 724, 1070, 1442
BssMI GATC 8 cut(s) 15, 78, 90, 162, 343, 1316, 1417, 1459
BssNI GRCGYC 1 cut(s) 1154
BssSI CACGAG 1 cut(s) 377
BssT1I CCWWGG 3 cut(s) 10, 724, 1442
Bst2BI CACGAG 1 cut(s) 377
Bst2UI CCWGG 2 cut(s) 459, 1455
Bst4CI ACNGT 7 cut(s) 97, 125, 526, 604, 1363, 1399, 1889
Bst6I CTCTTC 4 cut(s) 709, 890, 1122, 1847
BstACI GRCGYC 1 cut(s) 1154
BstAFI CTTAAG 1 cut(s) 811
BstAPI GCANNNNNTGC 3 cut(s) 535, 1100, 1664
BstBAI YACGTR 2 cut(s) 337, 877
BstC8I GCNNGC 3 cut(s) 546, 783, 1810
BstDEI CTNAG 1 cut(s) 1792
BstDSI CCRYGG 1 cut(s) 1070
BstF5I GGATG 2 cut(s) 937, 1882
BstFNI CGCG 1 cut(s) 1464
BstKTI GATC 8 cut(s) 18, 81, 93, 165, 346, 1319, 1420, 1462
BstMBI GATC 8 cut(s) 15, 78, 90, 162, 343, 1316, 1417, 1459
BstMCI CGRYCG 1 cut(s) 165
BstMWI GCNNNNNNNGC 7 cut(s) 368, 535, 1100, 1664, 1796, 1805, 1814
BstNI CCWGG 2 cut(s) 459, 1455
BstNSI RCATGY 3 cut(s) 114, 548, 781
BstSCI CCNGG 7 cut(s) 189, 190, 196, 457, 1156, 1201, 1453
BstSFI CTRYAG 1 cut(s) 1092
BstSLI GKGCMC 2 cut(s) 531, 1081
BstUI CGCG 1 cut(s) 1464
BstV1I GCAGC 4 cut(s) 447, 1078, 1651, 1774
BstV2I GAAGAC 2 cut(s) 1459, 1936
BstX2I RGATCY 2 cut(s) 15, 343
BstXI CCANNNNNNTGG 1 cut(s) 1071
BstYI RGATCY 2 cut(s) 15, 343
BsuRI GGCC 5 cut(s) 269, 362, 854, 881, 1293
BtgI CCRYGG 1 cut(s) 1070
BtrI CACGTC 1 cut(s) 803
BtsCI GGATG 2 cut(s) 937, 1882
BtsIMutI CAGTG 3 cut(s) 531, 1650, 1885
Cac8I GCNNGC 3 cut(s) 546, 783, 1810
CciI TCATGA 1 cut(s) 1047
Cfr10I RCCGGY 2 cut(s) 781, 1675
Cfr13I GGNCC 8 cut(s) 6, 194, 361, 558, 880, 1502, 1520, 1574
Cfr9I CCCGGG 1 cut(s) 190
CseI GACGC 4 cut(s) 16, 1162, 1453, 1805
Csp6I GTAC 5 cut(s) 98, 334, 565, 1180, 1768
CviQI GTAC 5 cut(s) 98, 334, 565, 1180, 1768
DdeI CTNAG 1 cut(s) 1792
DpnI GATC 8 cut(s) 17, 80, 92, 164, 345, 1318, 1419, 1461
DpnII GATC 8 cut(s) 15, 78, 90, 162, 343, 1316, 1417, 1459
DraI TTTAAA 1 cut(s) 1653
EaeI YGGCCR 3 cut(s) 267, 852, 1291
Eam1104I CTCTTC 4 cut(s) 709, 890, 1122, 1847
EarI CTCTTC 4 cut(s) 709, 890, 1122, 1847
EciI GGCGGA 1 cut(s) 1299
Eco130I CCWWGG 3 cut(s) 10, 724, 1442
Eco24I GRGCYC 1 cut(s) 75
Eco32I GATATC 1 cut(s) 258
Eco47I GGWCC 6 cut(s) 6, 194, 558, 1502, 1520, 1574
Eco57I CTGAAG 1 cut(s) 729
Eco72I CACGTG 1 cut(s) 877
Eco88I CYCGRG 1 cut(s) 190
EcoO109I RGGNCCY 1 cut(s) 194
EcoRI GAATTC 1 cut(s) 321
EcoRII CCWGG 2 cut(s) 457, 1453
EcoRV GATATC 1 cut(s) 258
EcoT14I CCWWGG 3 cut(s) 10, 724, 1442
EcoT22I ATGCAT 2 cut(s) 1043, 1480
EcoT38I GRGCYC 1 cut(s) 75
ErhI CCWWGG 3 cut(s) 10, 724, 1442
FaqI GGGAC 4 cut(s) 180, 440, 1173, 1890
FauNDI CATATG 3 cut(s) 431, 835, 1409
FbaI TGATCA 2 cut(s) 78, 90
FblI GTMKAC 1 cut(s) 942
Fnu4HI GCNGC 5 cut(s) 436, 852, 1092, 1665, 1788
FokI GGATG 2 cut(s) 944, 1889
FriOI GRGCYC 1 cut(s) 75
Fsp4HI GCNGC 5 cut(s) 436, 852, 1092, 1665, 1788
FspBI CTAG 3 cut(s) 11, 134, 150
GluI GCNGC 5 cut(s) 436, 852, 1092, 1665, 1788
HaeIII GGCC 5 cut(s) 269, 362, 854, 881, 1293
HapII CCGG 8 cut(s) 191, 198, 347, 782, 1121, 1157, 1203, 1676
HgaI GACGC 4 cut(s) 16, 1162, 1453, 1805
Hin1I GRCGYC 1 cut(s) 1154
HincII GTYRAC 1 cut(s) 483
HindII GTYRAC 1 cut(s) 483
HindIII AAGCTT 1 cut(s) 1286
HinfI GANTC 7 cut(s) 666, 1023, 1060, 1213, 1255, 1306, 1920
HpaII CCGG 8 cut(s) 191, 198, 347, 782, 1121, 1157, 1203, 1676
HphI GGTGA 5 cut(s) 76, 85, 989, 1469, 1892
Hpy166II GTNNAC 8 cut(s) 6, 483, 529, 552, 808, 943, 1690, 1883
Hpy188I TCNGA 4 cut(s) 121, 329, 831, 1152
Hpy188III TCNNGA 4 cut(s) 347, 402, 1048, 1415
Hpy8I GTNNAC 8 cut(s) 6, 483, 529, 552, 808, 943, 1690, 1883
HpyAV CCTTC 6 cut(s) 49, 61, 578, 888, 922, 1649
HpyCH4III ACNGT 7 cut(s) 97, 125, 526, 604, 1363, 1399, 1889
HpyCH4IV ACGT 3 cut(s) 336, 802, 876
HpyF10VI GCNNNNNNNGC 7 cut(s) 368, 535, 1100, 1664, 1796, 1805, 1814
HpyF3I CTNAG 1 cut(s) 1792
HpySE526I ACGT 3 cut(s) 336, 802, 876
Hsp92I GRCGYC 1 cut(s) 1154
KflI GGGWCCC 1 cut(s) 194
Kpn2I TCCGGA 1 cut(s) 346
KroI GCCGGC 1 cut(s) 781
KroNI GCCGGC 1 cut(s) 783
Ksp22I TGATCA 2 cut(s) 78, 90
Kzo9I GATC 8 cut(s) 15, 78, 90, 162, 343, 1316, 1417, 1459
LguI GCTCTTC 1 cut(s) 1847
Lsp1109I GCAGC 4 cut(s) 447, 1078, 1651, 1774
LweI GCATC 5 cut(s) 547, 709, 929, 1465, 1487
MaeI CTAG 3 cut(s) 11, 134, 150
MaeII ACGT 3 cut(s) 336, 802, 876
MaeIII GTNAC 2 cut(s) 138, 520
MalI GATC 8 cut(s) 17, 80, 92, 164, 345, 1318, 1419, 1461
MboI GATC 8 cut(s) 15, 78, 90, 162, 343, 1316, 1417, 1459
MfeI CAATTG 3 cut(s) 651, 750, 1696
MflI RGATCY 2 cut(s) 15, 343
MhlI GDGCHC 4 cut(s) 75, 531, 1081, 1824
MlsI TGGCCA 2 cut(s) 269, 1293
MluNI TGGCCA 2 cut(s) 269, 1293
MlyI GAGTC 2 cut(s) 675, 1264
MmeI TCCRAC 1 cut(s) 482
Mox20I TGGCCA 2 cut(s) 269, 1293
Mph1103I ATGCAT 2 cut(s) 1043, 1480
MroI TCCGGA 1 cut(s) 346
MroNI GCCGGC 1 cut(s) 781
MroXI GAANNNNTTC 2 cut(s) 413, 912
MscI TGGCCA 2 cut(s) 269, 1293
MseI TTAA 7 cut(s) 234, 419, 812, 1106, 1218, 1652, 1838
MslI CAYNNNNRTG 7 cut(s) 86, 430, 543, 638, 875, 1046, 1817
Msp20I TGGCCA 2 cut(s) 269, 1293
MspA1I CMGCKG 1 cut(s) 1664
MspCI CTTAAG 1 cut(s) 811
MspI CCGG 8 cut(s) 191, 198, 347, 782, 1121, 1157, 1203, 1676
MspR9I CCNGG 7 cut(s) 191, 192, 198, 459, 1158, 1203, 1455
MunI CAATTG 3 cut(s) 651, 750, 1696
Mva1269I GAATGC 1 cut(s) 425
MvaI CCWGG 2 cut(s) 459, 1455
MvnI CGCG 1 cut(s) 1464
MwoI GCNNNNNNNGC 7 cut(s) 368, 535, 1100, 1664, 1796, 1805, 1814
NaeI GCCGGC 1 cut(s) 783
NciI CCSGG 5 cut(s) 191, 192, 198, 1158, 1203
NdeI CATATG 3 cut(s) 431, 835, 1409
NdeII GATC 8 cut(s) 15, 78, 90, 162, 343, 1316, 1417, 1459
NgoMIV GCCGGC 1 cut(s) 781
NlaIV GGNNCC 5 cut(s) 8, 17, 195, 196, 345
NsiI ATGCAT 2 cut(s) 1043, 1480
NspI RCATGY 3 cut(s) 114, 548, 781
OliI CACNNNNGTG 1 cut(s) 875
PaeI GCATGC 1 cut(s) 548
PagI TCATGA 1 cut(s) 1047
PciSI GCTCTTC 1 cut(s) 1847
PcsI WCGNNNNNNNCGW 1 cut(s) 167
PctI GAATGC 1 cut(s) 425
PdiI GCCGGC 1 cut(s) 783
PdmI GAANNNNTTC 2 cut(s) 413, 912
PfeI GAWTC 5 cut(s) 1023, 1060, 1213, 1306, 1920
PflFI GACNNNGTC 1 cut(s) 556
PflMI CCANNNNNTGG 1 cut(s) 492
PfoI TCCNGGA 1 cut(s) 196
PkrI GCNGC 5 cut(s) 437, 853, 1093, 1666, 1789
Ple19I CGATCG 1 cut(s) 165
PleI GAGTC 2 cut(s) 674, 1263
PmaCI CACGTG 1 cut(s) 877
PmlI CACGTG 1 cut(s) 877
PpsI GAGTC 2 cut(s) 674, 1263
Ppu21I YACGTR 2 cut(s) 337, 877
PpuMI RGGWCCY 1 cut(s) 194
PshBI ATTAAT 1 cut(s) 1106
PsiI TTATAA 1 cut(s) 1617
Psp5II RGGWCCY 1 cut(s) 194
Psp6I CCWGG 2 cut(s) 457, 1453
PspCI CACGTG 1 cut(s) 877
PspGI CCWGG 2 cut(s) 457, 1453
PspN4I GGNNCC 5 cut(s) 8, 17, 195, 196, 345
PspPI GGNCC 8 cut(s) 6, 194, 361, 558, 880, 1502, 1520, 1574
PspPPI RGGWCCY 1 cut(s) 194
PstI CTGCAG 1 cut(s) 1096
PsuI RGATCY 2 cut(s) 15, 343
PsyI GACNNNGTC 1 cut(s) 556
PvuI CGATCG 1 cut(s) 165
PvuII CAGCTG 1 cut(s) 1664
RsaI GTAC 5 cut(s) 99, 335, 566, 1181, 1769
RsaNI GTAC 5 cut(s) 98, 334, 565, 1180, 1768
RseI CAYNNNNRTG 7 cut(s) 86, 430, 543, 638, 875, 1046, 1817
SapI GCTCTTC 1 cut(s) 1847
SaqAI TTAA 7 cut(s) 234, 419, 812, 1106, 1218, 1652, 1838
SatI GCNGC 5 cut(s) 436, 852, 1092, 1665, 1788
Sau3AI GATC 8 cut(s) 15, 78, 90, 162, 343, 1316, 1417, 1459
Sau96I GGNCC 8 cut(s) 6, 194, 361, 558, 880, 1502, 1520, 1574
SchI GAGTC 2 cut(s) 675, 1264
ScrFI CCNGG 7 cut(s) 191, 192, 198, 459, 1158, 1203, 1455
SduI GDGCHC 4 cut(s) 75, 531, 1081, 1824
SfaNI GCATC 5 cut(s) 547, 709, 929, 1465, 1487
SfcI CTRYAG 1 cut(s) 1092
SinI GGWCC 6 cut(s) 6, 194, 558, 1502, 1520, 1574
SmaI CCCGGG 1 cut(s) 192
SmiMI CAYNNNNRTG 7 cut(s) 86, 430, 543, 638, 875, 1046, 1817
SmlI CTYRAG 1 cut(s) 811
SmoI CTYRAG 1 cut(s) 811
SphI GCATGC 1 cut(s) 548
SsiI CCGC 7 cut(s) 64, 851, 1137, 1310, 1510, 1817, 1874
SspMI CTAG 3 cut(s) 11, 134, 150
StyD4I CCNGG 7 cut(s) 189, 190, 196, 457, 1156, 1201, 1453
StyI CCWWGG 3 cut(s) 10, 724, 1442
TaaI ACNGT 7 cut(s) 97, 125, 526, 604, 1363, 1399, 1889
TaiI ACGT 3 cut(s) 339, 805, 879
TaqI TCGA 5 cut(s) 161, 170, 225, 916, 923
TaqII GACCGA 1 cut(s) 1490
TatI WGTACW 1 cut(s) 1179
TauI GCSGC 1 cut(s) 854
TfiI GAWTC 5 cut(s) 1023, 1060, 1213, 1306, 1920
Tru1I TTAA 7 cut(s) 234, 419, 812, 1106, 1218, 1652, 1838
Tru9I TTAA 7 cut(s) 234, 419, 812, 1106, 1218, 1652, 1838
TscAI CASTG 3 cut(s) 531, 1650, 1892
TseI GCWGC 4 cut(s) 435, 1091, 1664, 1787
TspMI CCCGGG 1 cut(s) 190
TspRI CASTG 3 cut(s) 531, 1650, 1892
Tth111I GACNNNGTC 1 cut(s) 556
Van91I CCANNNNNTGG 1 cut(s) 492
Vha464I CTTAAG 1 cut(s) 811
VneI GTGCAC 1 cut(s) 527
VpaK11BI GGWCC 6 cut(s) 6, 194, 558, 1502, 1520, 1574
VspI ATTAAT 1 cut(s) 1106
XapI RAATTY 4 cut(s) 321, 410, 764, 771
XceI RCATGY 3 cut(s) 114, 548, 781
XcmI CCANNNNNNNNNTGG 4 cut(s) 298, 657, 1071, 1584
XmaI CCCGGG 1 cut(s) 190
XmaJI CCTAGG 1 cut(s) 10
XmiI GTMKAC 1 cut(s) 942
XmnI GAANNNNTTC 2 cut(s) 413, 912
XspI CTAG 3 cut(s) 11, 134, 150
Zsp2I ATGCAT 2 cut(s) 1043, 1480
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.