Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003716

Physical Location & Seq

Genomic Coordinates Forward (+)

57839015 .. 57844135

Gene Structure 5121 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ20926

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2166 bp

ATGGCTACCATACCTCTGGAAACCGAGCTTGTCGAGGCCAAACACGGTGGCAAAGAAGTTATCGACATTGACGATGAAGACGATGAGTTGTCACCGATCGAGGAGGTTCGTCTAACAGTGTCAAACGAAGACGACCCGACGCTTCCAGTATGGACATTCCGCATGTGGTCCATAGGCCTCTTCTCGTGCGCCCTCCTCTCCTTCCTCAACACCTTCTTCTCCTACCGCACCGAGCCCCTCGTCATCTCCGTGATCTCCGTCCAGGTGGCGAGTCTCCCCCTCGGAAAGTTCATGGCGAGGACCCTGCCCACGAGGAAGTTCCGAATTGGCTCGAAAGAGTTTTCACTTAATCCTGGTGAGTTCAACATCAAGGAGCACGTGTTGATATCGATTTTTGCAAATGCCGGAGCAGGGTTTGGGAGCGGTCCGGCTTATGCAGTTGGGATTGTGACTATCGTAAAGGCGTTTTATGTGAGGAACATATCTTTCTTGGCGAGTTGGATACTTGTTATTACCACGCAGGTTTTGGGGTATGGATGGGCGGGTATTCTCCGGAAGTACGTGGTGGATCCGGCTACAATGTGGTGGCCTAGTAGTCTGGTTCAGGTCTCTTTGTTTAGGGCTCTACACGAGAAAGACAACAACCGCATGTCCAGAGGAAAATTCTTTCTGATTGCGCTGGTATGCAGCTTCTCTTGGTATGTTGTCCCAGACTACCTTTTCACAACTATATCAACCATTTCATGGGTTTGCTGGCTTTTCCCCAAGTCAATAACAGCACATCAAATCGGGTCGGGCATGCGTGGACTTGGTATTGGGTCACTTACATTGGATTGGTCTGTCATAGCCTCGTACTTAGGCAGCCCACTGATCAGCCCATTTTTTGCCATTGTCAATATCACTGTTGGCTATATTCTCACCATGTATGTGGTATTACCGACTGCCTATTGGGGATTCAACTTATACAATGCCAAGAACTTCGCAATCTTCTCTAAAAACTTGTTTGATGACCATGGTGAAATATATAATGTCACGGCCATTGTCAATGACAAGTTCGAAATTGACATGCCTGCCTACAAAAAACAAGGACATATAAACCTCAGTGTGTTCTTTTCTCTGACCTACGGGATTGGCTTCGCTGGTGTTATATCGACCATCACACATGTGGCTCTATTCAATGGAAGGGAGATGTATGAGAAATACAAAGCTGCACATACTGGAAAGGTGGACATCCACACCAGATTGATGAGAAATTACAGAGACATACCTACCTGGTGGTTTCATATTCTGCTTTTGTTGTCGCTTGCACTGTCTCTGGCGTTATGCATTTTCATGAAAGATGAGGTACAACTGCCTTGGTGGGGACTCCTTTTTGCAGCTGCAATTGCATCGGTTTTCACTCTTCCGATTAGCTCACCAGGACTAAACGTAATCACAGAGTATATAATGGGTTTGATATTACCTGGAGAACCAATAGCCAATGTATGCTTCAAAACCTATGGGTATATAAGCATGGCGCAGGCAATTTCCTTTCTGAGTGATTTCAAGTTAGGTCACTACATGAAGATCCCACCCATATCGATGTTCATAGTTCAGTGCATAGGAACTGTGATAGCCGGAACAGTCAATATTGGGGTGGCATGGTGGCTGCTAACTACTGTGGAAAACATATGTCAAGAAAGTTTACTCCCTCCTGATAGTCCTTGGACTTGTCGAATATTTGGCTCCCTTGGATACTACTCAGCACTTAACTGGTTCTTCCTATTCGGTGCAATTGGACCTCTCATAGTATGGTTGTTGCATAAAGCTTTTCCAAGTCAAAAATGGATCGCGCTGATCAACCTTCCCGTGCTTTTGGGAGCAACGGCTGTAATGCCACCGGCTTCAACTGTGAACTTCAATTGCTGGATTATTGTTGGACTTGTTTTCAGTTACTATGTATTCAGATACAGAAAGACATGGTGGCAAAGGTACAATTATGTTCTTTCAGCTGCCTTAGATGCTGGAGTAGCTTTCATGGCGGTGCTTGTATATTTATCAATGAATGGTAAGGGCATATCTTGGTGGGGAACAGATGGGGAACACTGTGAGCTGGCTACCTGTCCAACAGCTGAAGGCTTGGATCTTGGTCATGCTTGTGTTTCATCTAAAAGAAAGGCATTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006857 GO:0008150 GO:0015833 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

721

Amino Acids

80.63

Weight (kDa)

7.55

Isoelectric Point (pI)

28.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	50 - 680	9.2e-165	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003716)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09930
fragaria_vesca	FvH4_5g34010 FvH4_5g34011
malus_domestica	MD08G1206700.v1.1 MD15G1390200.v1.1 MD15G1390400.v1.1
prunus_persica	Prupe.1G539200_v2.0.a1 Prupe.1G539300_v2.0.a1
pyrus_communis	pycom15g34950 pycom15g34960
rosa_chinensis	RchiOBHm_Chr7g0233451 RchiOBHm_Chr7g0233471
rosa_laevigata	RLG00000001268 RLG00000001269
rosa_multiflora	Rmu_sc0000029.1_g000038 Rmu_sc0000029.1_g000051
rosa_roxburghii	Rroxscaffold_3G00227270 Rroxscaffold_3G00227290
rosa_rugosa	Rorug07G0280800 Rorug07G0280800
rosa_samantha	Rh7AG436600 Rh7AG436700 Rh7BG409700 Rh7BG409800 Rh7CG456500 Rh7CG456700 Rh7DG425800 Rh7DG425900
rosa_wichuraiana	Rw0G008530 Rw0G022500 Rw7G036000 Rw7G036010 Rw7G036030 Rw7G036040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	511
AccB7I	CCANNNNNTGG	1 cut(s)	744
AccBSI	CCGCTC	1 cut(s)	423
AccII	CGCG	1 cut(s)	1832
AccIII	TCCGGA	1 cut(s)	552
AciI	CCGC	6 cut(s)	160, 226, 423, 542, 646, 2021
AclWI	GGATC	5 cut(s)	563, 576, 1561, 1835, 2130
AcoI	YGGCCR	1 cut(s)	1035
AcsI	RAATTY	1 cut(s)	662
AcuI	CTGAAG	1 cut(s)	2133
AcvI	CACGTG	1 cut(s)	379
AfaI	GTAC	4 cut(s)	560, 854, 1347, 1973
AfiI	CCNNNNNNNGG	3 cut(s)	411, 744, 1361
AflIII	ACRYGT	2 cut(s)	378, 1162
AgsI	TTSAA	7 cut(s)	364, 958, 1177, 1492, 1546, 1887, 1900
AjnI	CCWGG	5 cut(s)	261, 352, 1271, 1417, 1462
AjuI	GAANNNNNNNTTGG	2 cut(s)	1472, 1504
AleI	CACNNNNGTG	1 cut(s)	1163
Alw21I	GWGCWC	1 cut(s)	378
Alw26I	GTCTC	4 cut(s)	278, 613, 1254, 1317
AlwI	GGATC	5 cut(s)	563, 576, 1561, 1835, 2130
Aor13HI	TCCGGA	1 cut(s)	552
AoxI	GGCC	4 cut(s)	36, 175, 587, 1035
ApeKI	GCWGC	7 cut(s)	687, 861, 1208, 1376, 1379, 1648, 1991
ApoI	RAATTY	1 cut(s)	662
AspLEI	GCGC	4 cut(s)	191, 679, 1519, 1834
AspS9I	GGNCC	4 cut(s)	168, 300, 425, 1778
AsuHPI	GGTGA	5 cut(s)	84, 368, 910, 1028, 1407
AsuII	TTCGAA	1 cut(s)	1056
AvaII	GGWCC	4 cut(s)	168, 300, 425, 1778
BamHI	GGATCC	1 cut(s)	568
BanII	GRGCYC	2 cut(s)	237, 625
BauI	CACGAG	3 cut(s)	184, 310, 629
BbrPI	CACGTG	1 cut(s)	379
BbsI	GAAGAC	2 cut(s)	84, 135
Bbv12I	GWGCWC	1 cut(s)	378
BbvI	GCAGC	7 cut(s)	699, 873, 1195, 1366, 1388, 1635, 1978
BccI	CCATC	3 cut(s)	531, 1163, 2069
BceAI	ACGGC	2 cut(s)	1050, 1881
BcgI	CGANNNNNNTGC	4 cut(s)	286, 320, 1371, 1405
BciT130I	CCWGG	5 cut(s)	263, 354, 1273, 1419, 1464
BciVI	GTATCC	2 cut(s)	495, 1727
BclI	TGATCA	2 cut(s)	870, 1836
BcoDI	GTCTC	4 cut(s)	278, 613, 1254, 1317
BfaI	CTAG	1 cut(s)	591
BfuAI	ACCTGC	1 cut(s)	511
BfuI	GTATCC	2 cut(s)	495, 1727
BisI	GCNGC	7 cut(s)	688, 862, 1209, 1377, 1380, 1649, 1992
BlsI	GCNGC	7 cut(s)	689, 863, 1210, 1378, 1381, 1650, 1993
Bme1390I	CCNGG	5 cut(s)	263, 354, 1273, 1419, 1464
Bme18I	GGWCC	4 cut(s)	168, 300, 425, 1778
BmgT120I	GGNCC	4 cut(s)	168, 300, 425, 1778
BmiI	GGNNCC	3 cut(s)	302, 570, 1726
BmrFI	CCNGG	5 cut(s)	263, 354, 1273, 1419, 1464
BmsI	GCATC	2 cut(s)	1397, 1990
BpiI	GAAGAC	2 cut(s)	84, 135
BpmI	CTGGAG	2 cut(s)	1485, 2025
Bpu14I	TTCGAA	1 cut(s)	1056
Bsa29I	ATCGAT	2 cut(s)	389, 1580
BsaAI	YACGTR	2 cut(s)	379, 562
BsaI	GGTCTC	1 cut(s)	613
BsaJI	CCNNGG	5 cut(s)	280, 1012, 1355, 1703, 1729
BsaWI	WCCGGW	1 cut(s)	552
BsaXI	ACNNNNNCTCC	2 cut(s)	365, 395
Bsc4I	CCNNNNNNNGG	3 cut(s)	411, 744, 1361
Bse118I	RCCGGY	1 cut(s)	1879
Bse1I	ACTGG	3 cut(s)	146, 1222, 1757
BseAI	TCCGGA	1 cut(s)	552
BseBI	CCWGG	5 cut(s)	263, 354, 1273, 1419, 1464
BseCI	ATCGAT	2 cut(s)	389, 1580
BseDI	CCNNGG	5 cut(s)	280, 1012, 1355, 1703, 1729
BseGI	GGATG	2 cut(s)	542, 1230
BseLI	CCNNNNNNNGG	3 cut(s)	411, 744, 1361
BseMII	CTCAG	3 cut(s)	1114, 1526, 1755
BseNI	ACTGG	3 cut(s)	146, 1222, 1757
BseRI	GAGGAG	2 cut(s)	116, 185
BseXI	GCAGC	7 cut(s)	699, 873, 1195, 1366, 1388, 1635, 1978
BsgI	GTGCAG	1 cut(s)	1194
Bsh1236I	CGCG	1 cut(s)	1832
Bsh1285I	CGRYCG	1 cut(s)	99
BshFI	GGCC	4 cut(s)	38, 177, 589, 1037
BshVI	ATCGAT	2 cut(s)	389, 1580
BsiEI	CGRYCG	1 cut(s)	99
BsiHKAI	GWGCWC	1 cut(s)	378
BsiSI	CCGG	6 cut(s)	405, 428, 553, 572, 1617, 1880
BslFI	GGGAC	2 cut(s)	692, 1377
BslI	CCNNNNNNNGG	3 cut(s)	411, 744, 1361
BsmAI	GTCTC	4 cut(s)	278, 613, 1254, 1317
BsmFI	GGGAC	2 cut(s)	692, 1377
BsnI	GGCC	4 cut(s)	38, 177, 589, 1037
Bso31I	GGTCTC	1 cut(s)	613
Bsp119I	TTCGAA	1 cut(s)	1056
Bsp1286I	GDGCHC	3 cut(s)	237, 378, 625
Bsp13I	TCCGGA	1 cut(s)	552
Bsp143I	GATC	8 cut(s)	96, 252, 568, 870, 1566, 1827, 1836, 2122
Bsp19I	CCATGG	1 cut(s)	1012
BspACI	CCGC	6 cut(s)	160, 226, 423, 542, 646, 2021
BspANI	GGCC	4 cut(s)	38, 177, 589, 1037
BspCNI	CTCAG	3 cut(s)	1113, 1527, 1754
BspDI	ATCGAT	2 cut(s)	389, 1580
BspEI	TCCGGA	1 cut(s)	552
BspFNI	CGCG	1 cut(s)	1832
BspHI	TCATGA	1 cut(s)	1332
BspLI	GGNNCC	3 cut(s)	302, 570, 1726
BspMI	ACCTGC	1 cut(s)	511
BspPI	GGATC	5 cut(s)	563, 576, 1561, 1835, 2130
BspT104I	TTCGAA	1 cut(s)	1056
BspTNI	GGTCTC	1 cut(s)	613
BsrBI	CCGCTC	1 cut(s)	423
BsrFI	RCCGGY	1 cut(s)	1879
BsrI	ACTGG	3 cut(s)	146, 1222, 1757
BssAI	RCCGGY	1 cut(s)	1879
BssECI	CCNNGG	5 cut(s)	280, 1012, 1355, 1703, 1729
BssMI	GATC	8 cut(s)	96, 252, 568, 870, 1566, 1827, 1836, 2122
BssSI	CACGAG	3 cut(s)	184, 310, 629
BssT1I	CCWWGG	4 cut(s)	1012, 1355, 1703, 1729
Bst2BI	CACGAG	3 cut(s)	184, 310, 629
Bst2UI	CCWGG	5 cut(s)	263, 354, 1273, 1419, 1464
Bst4CI	ACNGT	9 cut(s)	47, 118, 904, 1311, 1609, 1624, 1660, 1891, 2087
Bst6I	CTCTTC	2 cut(s)	185, 1407
BstBAI	YACGTR	2 cut(s)	379, 562
BstBI	TTCGAA	1 cut(s)	1056
BstC8I	GCNNGC	6 cut(s)	755, 800, 1071, 1305, 1521, 2094
BstDEI	CTNAG	5 cut(s)	856, 1100, 1535, 1741, 1996
BstDSI	CCRYGG	1 cut(s)	1012
BstF5I	GGATG	2 cut(s)	542, 1230
BstFNI	CGCG	1 cut(s)	1832
BstHHI	GCGC	4 cut(s)	191, 679, 1519, 1834
BstKTI	GATC	8 cut(s)	99, 255, 571, 873, 1569, 1830, 1839, 2125
BstMAI	GTCTC	4 cut(s)	278, 613, 1254, 1317
BstMBI	GATC	8 cut(s)	96, 252, 568, 870, 1566, 1827, 1836, 2122
BstMCI	CGRYCG	1 cut(s)	99
BstMWI	GCNNNNNNNGC	4 cut(s)	1385, 2000, 2009, 2018
BstNI	CCWGG	5 cut(s)	263, 354, 1273, 1419, 1464
BstNSI	RCATGY	5 cut(s)	166, 652, 802, 1069, 1166
BstSCI	CCNGG	5 cut(s)	261, 352, 1271, 1417, 1462
BstUI	CGCG	1 cut(s)	1832
BstV1I	GCAGC	7 cut(s)	699, 873, 1195, 1366, 1388, 1635, 1978
BstV2I	GAAGAC	2 cut(s)	84, 135
BstX2I	RGATCY	3 cut(s)	568, 1566, 2122
BstXI	CCANNNNNNTGG	2 cut(s)	16, 928
BstYI	RGATCY	3 cut(s)	568, 1566, 2122
Bsu15I	ATCGAT	2 cut(s)	389, 1580
BsuI	GTATCC	2 cut(s)	495, 1727
BsuRI	GGCC	4 cut(s)	38, 177, 589, 1037
BsuTUI	ATCGAT	2 cut(s)	389, 1580
BtgI	CCRYGG	1 cut(s)	1012
BtsCI	GGATG	2 cut(s)	542, 1230
BtsIMutI	CAGTG	7 cut(s)	123, 866, 900, 1108, 1307, 1601, 2083
BveI	ACCTGC	1 cut(s)	511
Cac8I	GCNNGC	6 cut(s)	755, 800, 1071, 1305, 1521, 2094
CciI	TCATGA	1 cut(s)	1332
CfoI	GCGC	4 cut(s)	191, 679, 1519, 1834
Cfr10I	RCCGGY	1 cut(s)	1879
Cfr13I	GGNCC	4 cut(s)	168, 300, 425, 1778
ClaI	ATCGAT	2 cut(s)	389, 1580
CpoI	CGGWCCG	1 cut(s)	425
CseI	GACGC	1 cut(s)	148
CsiI	ACCWGGT	1 cut(s)	1271
Csp6I	GTAC	4 cut(s)	559, 853, 1346, 1972
CspCI	CAANNNNNGTGG	2 cut(s)	28, 63
CspI	CGGWCCG	1 cut(s)	425
CviQI	GTAC	4 cut(s)	559, 853, 1346, 1972
DdeI	CTNAG	5 cut(s)	856, 1100, 1535, 1741, 1996
DpnI	GATC	8 cut(s)	98, 254, 570, 872, 1568, 1829, 1838, 2124
DpnII	GATC	8 cut(s)	96, 252, 568, 870, 1566, 1827, 1836, 2122
EaeI	YGGCCR	1 cut(s)	1035
Eam1104I	CTCTTC	2 cut(s)	185, 1407
EarI	CTCTTC	2 cut(s)	185, 1407
Eco130I	CCWWGG	4 cut(s)	1012, 1355, 1703, 1729
Eco147I	AGGCCT	1 cut(s)	177
Eco24I	GRGCYC	2 cut(s)	237, 625
Eco31I	GGTCTC	1 cut(s)	613
Eco32I	GATATC	1 cut(s)	387
Eco47I	GGWCC	4 cut(s)	168, 300, 425, 1778
Eco57I	CTGAAG	1 cut(s)	2133
Eco72I	CACGTG	1 cut(s)	379
EcoO109I	RGGNCCY	1 cut(s)	300
EcoRII	CCWGG	5 cut(s)	261, 352, 1271, 1417, 1462
EcoRV	GATATC	1 cut(s)	387
EcoT14I	CCWWGG	4 cut(s)	1012, 1355, 1703, 1729
EcoT22I	ATGCAT	1 cut(s)	1328
EcoT38I	GRGCYC	2 cut(s)	237, 625
ErhI	CCWWGG	4 cut(s)	1012, 1355, 1703, 1729
FaqI	GGGAC	2 cut(s)	692, 1377
FauI	CCCGC	1 cut(s)	535
FauNDI	CATATG	1 cut(s)	1670
FbaI	TGATCA	2 cut(s)	870, 1836
Fnu4HI	GCNGC	7 cut(s)	688, 862, 1209, 1377, 1380, 1649, 1992
FokI	GGATG	2 cut(s)	549, 1217
FriOI	GRGCYC	2 cut(s)	237, 625
Fsp4HI	GCNGC	7 cut(s)	688, 862, 1209, 1377, 1380, 1649, 1992
FspBI	CTAG	1 cut(s)	591
GlaI	GCGC	4 cut(s)	190, 678, 1518, 1833
GluI	GCNGC	7 cut(s)	688, 862, 1209, 1377, 1380, 1649, 1992
GsuI	CTGGAG	2 cut(s)	1485, 2025
HaeIII	GGCC	4 cut(s)	38, 177, 589, 1037
HapII	CCGG	6 cut(s)	405, 428, 553, 572, 1617, 1880
HgaI	GACGC	1 cut(s)	148
HhaI	GCGC	4 cut(s)	191, 679, 1519, 1834
Hin6I	GCGC	4 cut(s)	189, 677, 1517, 1832
HinP1I	GCGC	4 cut(s)	189, 677, 1517, 1832
HindIII	AAGCTT	1 cut(s)	1806
HinfI	GANTC	3 cut(s)	271, 954, 1365
HpaII	CCGG	6 cut(s)	405, 428, 553, 572, 1617, 1880
HphI	GGTGA	5 cut(s)	84, 368, 910, 1028, 1407
Hpy166II	GTNNAC	4 cut(s)	806, 1228, 1685, 1894
Hpy188I	TCNGA	7 cut(s)	284, 323, 672, 1119, 1407, 1536, 1946
Hpy188III	TCNNGA	6 cut(s)	17, 553, 654, 1333, 1676, 1694
Hpy8I	GTNNAC	4 cut(s)	806, 1228, 1685, 1894
Hpy99I	CGWCG	1 cut(s)	142
HpyAV	CCTTC	5 cut(s)	211, 223, 1176, 1853, 2108
HpyCH4III	ACNGT	9 cut(s)	47, 118, 904, 1311, 1609, 1624, 1660, 1891, 2087
HpyCH4IV	ACGT	3 cut(s)	378, 561, 1428
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1385, 2000, 2009, 2018
HpyF3I	CTNAG	5 cut(s)	856, 1100, 1535, 1741, 1996
HpySE526I	ACGT	3 cut(s)	378, 561, 1428
HspAI	GCGC	4 cut(s)	189, 677, 1517, 1832
Kpn2I	TCCGGA	1 cut(s)	552
Ksp22I	TGATCA	2 cut(s)	870, 1836
Kzo9I	GATC	8 cut(s)	96, 252, 568, 870, 1566, 1827, 1836, 2122
LmnI	GCTCC	5 cut(s)	373, 407, 420, 1730, 1859
Lsp1109I	GCAGC	7 cut(s)	699, 873, 1195, 1366, 1388, 1635, 1978
LweI	GCATC	2 cut(s)	1397, 1990
MabI	ACCWGGT	1 cut(s)	1271
MaeI	CTAG	1 cut(s)	591
MaeII	ACGT	3 cut(s)	378, 561, 1428
MaeIII	GTNAC	6 cut(s)	90, 448, 819, 1030, 1553, 1931
MalI	GATC	8 cut(s)	98, 254, 570, 872, 1568, 1829, 1838, 2124
MbiI	CCGCTC	1 cut(s)	423
MboI	GATC	8 cut(s)	96, 252, 568, 870, 1566, 1827, 1836, 2122
MboII	GAAGA	8 cut(s)	89, 140, 172, 208, 979, 1394, 1576, 1750
MfeI	CAATTG	3 cut(s)	1383, 1773, 1900
MflI	RGATCY	3 cut(s)	568, 1566, 2122
MhlI	GDGCHC	3 cut(s)	237, 378, 625
MluCI	AATT	9 cut(s)	324, 662, 1059, 1252, 1383, 1524, 1773, 1900, 1975
MlyI	GAGTC	2 cut(s)	280, 1359
MmeI	TCCRAC	3 cut(s)	479, 1897, 2129
Mph1103I	ATGCAT	1 cut(s)	1328
MroI	TCCGGA	1 cut(s)	552
MseI	TTAA	2 cut(s)	348, 1749
MslI	CAYNNNNRTG	7 cut(s)	248, 926, 1163, 1331, 1580, 2021, 2136
MspA1I	CMGCKG	3 cut(s)	1379, 1991, 2111
MspI	CCGG	6 cut(s)	405, 428, 553, 572, 1617, 1880
MspR9I	CCNGG	5 cut(s)	263, 354, 1273, 1419, 1464
MunI	CAATTG	3 cut(s)	1383, 1773, 1900
MvaI	CCWGG	5 cut(s)	263, 354, 1273, 1419, 1464
MvnI	CGCG	1 cut(s)	1832
MwoI	GCNNNNNNNGC	4 cut(s)	1385, 2000, 2009, 2018
NcoI	CCATGG	1 cut(s)	1012
NdeI	CATATG	1 cut(s)	1670
NdeII	GATC	8 cut(s)	96, 252, 568, 870, 1566, 1827, 1836, 2122
NlaIV	GGNNCC	3 cut(s)	302, 570, 1726
NmuCI	GTSAC	5 cut(s)	90, 448, 819, 1030, 1553
NsiI	ATGCAT	1 cut(s)	1328
NspI	RCATGY	5 cut(s)	166, 652, 802, 1069, 1166
NspV	TTCGAA	1 cut(s)	1056
OliI	CACNNNNGTG	1 cut(s)	1163
PaeI	GCATGC	1 cut(s)	802
PagI	TCATGA	1 cut(s)	1332
PceI	AGGCCT	1 cut(s)	177
PciI	ACATGT	1 cut(s)	1162
PcsI	WCGNNNNNNNCGW	3 cut(s)	69, 78, 246
PfeI	GAWTC	1 cut(s)	954
PflMI	CCANNNNNTGG	1 cut(s)	744
PkrI	GCNGC	7 cut(s)	689, 863, 1210, 1378, 1381, 1650, 1993
Ple19I	CGATCG	1 cut(s)	99
PleI	GAGTC	2 cut(s)	279, 1359
PmaCI	CACGTG	1 cut(s)	379
PmlI	CACGTG	1 cut(s)	379
PpsI	GAGTC	2 cut(s)	279, 1359
Ppu21I	YACGTR	2 cut(s)	379, 562
PpuMI	RGGWCCY	1 cut(s)	300
PscI	ACATGT	1 cut(s)	1162
Psp5II	RGGWCCY	1 cut(s)	300
Psp6I	CCWGG	5 cut(s)	261, 352, 1271, 1417, 1462
PspCI	CACGTG	1 cut(s)	379
PspGI	CCWGG	5 cut(s)	261, 352, 1271, 1417, 1462
PspN4I	GGNNCC	3 cut(s)	302, 570, 1726
PspPI	GGNCC	4 cut(s)	168, 300, 425, 1778
PspPPI	RGGWCCY	1 cut(s)	300
PsuI	RGATCY	3 cut(s)	568, 1566, 2122
PvuI	CGATCG	1 cut(s)	99
PvuII	CAGCTG	3 cut(s)	1379, 1991, 2111
RsaI	GTAC	4 cut(s)	560, 854, 1347, 1973
RsaNI	GTAC	4 cut(s)	559, 853, 1346, 1972
RseI	CAYNNNNRTG	7 cut(s)	248, 926, 1163, 1331, 1580, 2021, 2136
Rsr2I	CGGWCCG	1 cut(s)	425
RsrII	CGGWCCG	1 cut(s)	425
SaqAI	TTAA	2 cut(s)	348, 1749
SatI	GCNGC	7 cut(s)	688, 862, 1209, 1377, 1380, 1649, 1992
Sau3AI	GATC	8 cut(s)	96, 252, 568, 870, 1566, 1827, 1836, 2122
Sau96I	GGNCC	4 cut(s)	168, 300, 425, 1778
SchI	GAGTC	2 cut(s)	280, 1359
ScrFI	CCNGG	5 cut(s)	263, 354, 1273, 1419, 1464
SduI	GDGCHC	3 cut(s)	237, 378, 625
SexAI	ACCWGGT	1 cut(s)	1271
SfaNI	GCATC	2 cut(s)	1397, 1990
SfuI	TTCGAA	1 cut(s)	1056
SinI	GGWCC	4 cut(s)	168, 300, 425, 1778
SmiMI	CAYNNNNRTG	7 cut(s)	248, 926, 1163, 1331, 1580, 2021, 2136
SphI	GCATGC	1 cut(s)	802
Sse9I	AATT	9 cut(s)	324, 662, 1059, 1252, 1383, 1524, 1773, 1900, 1975
SseBI	AGGCCT	1 cut(s)	177
SsiI	CCGC	6 cut(s)	160, 226, 423, 542, 646, 2021
SspI	AATATT	2 cut(s)	1630, 1719
SspMI	CTAG	1 cut(s)	591
StuI	AGGCCT	1 cut(s)	177
StyD4I	CCNGG	5 cut(s)	261, 352, 1271, 1417, 1462
StyI	CCWWGG	4 cut(s)	1012, 1355, 1703, 1729
TaaI	ACNGT	9 cut(s)	47, 118, 904, 1311, 1609, 1624, 1660, 1891, 2087
TaiI	ACGT	3 cut(s)	381, 564, 1431
TaqI	TCGA	9 cut(s)	33, 63, 99, 332, 389, 1056, 1151, 1580, 1714
TasI	AATT	9 cut(s)	324, 662, 1059, 1252, 1383, 1524, 1773, 1900, 1975
TfiI	GAWTC	1 cut(s)	954
Tru1I	TTAA	2 cut(s)	348, 1749
Tru9I	TTAA	2 cut(s)	348, 1749
TscAI	CASTG	7 cut(s)	123, 873, 907, 1108, 1314, 1601, 2090
TseFI	GTSAC	5 cut(s)	90, 448, 819, 1030, 1553
TseI	GCWGC	7 cut(s)	687, 861, 1208, 1376, 1379, 1648, 1991
Tsp45I	GTSAC	5 cut(s)	90, 448, 819, 1030, 1553
TspGWI	ACGGA	2 cut(s)	238, 247
TspRI	CASTG	7 cut(s)	123, 873, 907, 1108, 1314, 1601, 2090
Van91I	CCANNNNNTGG	1 cut(s)	744
VpaK11BI	GGWCC	4 cut(s)	168, 300, 425, 1778
XapI	RAATTY	1 cut(s)	662
XceI	RCATGY	5 cut(s)	166, 652, 802, 1069, 1166
XcmI	CCANNNNNNNNNTGG	3 cut(s)	523, 1162, 1821
XspI	CTAG	1 cut(s)	591
Zsp2I	ATGCAT	1 cut(s)	1328

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.