Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0003716

Physical Location & Seq

Genomic Coordinates Forward (+)

24667950 .. 24670800

Gene Structure 2851 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g34011.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1971 bp

ATGGACATAGAGATCAGCAAACTCGAGGTGGAAGACGACTTGTCACCCGTCGAACAGGTCCGCTTGACGGTCTCGAACGAAGACGACCTGACCCTTCCAATATGGACCTTCCGGATGTGGACCCTAGGGCTCCTCTCCTGCGTCCTCCTCTCCTTCCTCAACACCTTCTTCTCCTACCGCACCGAGCCCTTCGTCATCACCATGATCACCATACAGGTGATCACTCTGCCCATCGGACGCTTCATGGCTAGAACATTGCCCACTCGGAAGTTCTCCATCGGGTCGATGGAGTTCTCCCTCAACCCGGGTCCCTTTAACAAGAAGGAGCACGTCCTGATCTCCATATTTGCCAACGCCGGCACCGGGTTCGGAAGTGGAACGGCTTATGCTATTGGTATTGTTGATATAATTAAGGTGTTTTATCACTGGAAGATATCGTTCTTGGCTAGTTGGATTCTTGTCAATACCACACAGGTATTGGGTTATGGGTGGGCTGGAATTCTCCGAAAGTACGTGGTGGATCCGGGGGAGATGTGGTGGCCGGCTAGTCTAAGTCAGGTGAACTTTGCTCTACACGAGAAAGATAACAAGGGAATGTCCAGAGTGAAATTCTTCTTGATTGCATTCATATGTAGCTTCTCCTGGGGTTTTGTCCCGGGTTATCTTTTCCCAACTATCGCAACTATTTCATGGATTTGTTGGATATACCCAAAGTCAGTAACAGCTCAACAAATTGGATCCGGTATGAATGGACTTGGTGTGGCTGCATTTTCTCTTGACTGGACTTCTATAGCTTCGTTCCTTGGTAGTCCTTTGGTTAGCCCTTTCTTTGCCACTGTTAATGTTGCAGTTGGCTATGTTGCTTTCATGTATTTGATCATGCCAACTGTCTACTGGGGTTTCAACTTATTCAACGCCAAGAACTTCCCTATCTTCTCTTCGGATTTGTTTGATTCCCATGGTCAAGTATATAACGTTTCAGCAATTGTGAATAACCAGTTTCAAATTGACATGCCCGCGTATGAAAAACAAGGACGCGTAAGCTTGAGTATGTTTTTTGCTCTATCATATGGTATTGGCTTTGCAGCCATTGTATCAACCCTGACACATGTGGCCCTCTTCAATGGAAGGGAGATATATGAACAATTTCGTGCATCGAAGAAAGATGGAAAGACGCCGGGACTAAACGTGATCACAGAGTACGCCATTGGATTGATTTTACCTGGAAAACCGATTCTTAATGTATGCTTCAAAACATATGGATATATTAGCATGGCTCAGGCAATTTCCTTTCTCAATGATTTCAAGCTTGGCCATTACATGAAGATTCCACCCAGATCAATGTTTATAGTTCAGTTGATAGGAACTGTTATAGCTGGAACAGTCAACATCGGGGTTGCATGGTGGCTCTTATCTACTATGGAAAACATATGTCAACATGAATTACTCCCTCCTAATAGTCCTTGGACTTGTCCTAATGATCGAGTATTCTTTGATGCTTCTGTCCTTTGGGGTCTTGTTGGTCCAAAGCGGATGTTTGGCTCTCTAGGAAACTATCCAGCACTCAACTGGTTCTTCCTTTTAGGTGCATTTGGACCGCTCTTGGTATGGTTGTTGCACAGAGCTTTTCCTAGTCATAAATGGATTCAACTTATCAACCTTCTAGTGCTTTTGGGGGCGACAACTAATATGCCACCGGCTACAGCAGTAAACTACAATTGCTGGATTATTACTGGAACTATTTTCGGCTACTTTGTCTTTAGATATAGAAAGGCACGGTGGCTGAGGTACAATTATGTTCTTTCAGCTGCCTTAGATGTTGGAGTGGCTTTCATGGCGGTGCTCTTATACTTTACATTAACCATGAACGAGACGAGCGTATCTTGGTGGGGTGCAAATGGTGAACACTGTGAATTGGTTACATGTCCAACAACAAAAGGCATCGTTGTTGATGGTTGTCCTGTCTACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006857 GO:0008150 GO:0015833 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

657

Amino Acids

73.58

Weight (kDa)

8.63

Isoelectric Point (pI)

26.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	35 - 386	7.2e-86	OPT oligopeptide transporter protein
OPT	PF03169	393 - 619	3.7e-62	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003716)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09930
fragaria_vesca	FvH4_5g34010 FvH4_5g34011
malus_domestica	MD08G1206700.v1.1 MD15G1390200.v1.1 MD15G1390400.v1.1
prunus_persica	Prupe.1G539200_v2.0.a1 Prupe.1G539300_v2.0.a1
pyrus_communis	pycom15g34950 pycom15g34960
rosa_chinensis	RchiOBHm_Chr7g0233451 RchiOBHm_Chr7g0233471
rosa_laevigata	RLG00000001268 RLG00000001269
rosa_multiflora	Rmu_sc0000029.1_g000038 Rmu_sc0000029.1_g000051
rosa_roxburghii	Rroxscaffold_3G00227270 Rroxscaffold_3G00227290
rosa_rugosa	Rorug07G0280800 Rorug07G0280800
rosa_samantha	Rh7AG436600 Rh7AG436700 Rh7BG409700 Rh7BG409800 Rh7CG456500 Rh7CG456700 Rh7DG425800 Rh7DG425900
rosa_wichuraiana	Rw0G008530 Rw0G022500 Rw7G036000 Rw7G036010 Rw7G036030 Rw7G036040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	359
AccBSI	CCGCTC	1 cut(s)	1600
AccI	GTMKAC	2 cut(s)	891, 1965
AccII	CGCG	2 cut(s)	1019, 1038
AccIII	TCCGGA	1 cut(s)	111
AciI	CCGC	6 cut(s)	61, 178, 1017, 1531, 1598, 1838
AclI	AACGTT	1 cut(s)	975
AclWI	GGATC	4 cut(s)	515, 528, 732, 745
AcoI	YGGCCR	2 cut(s)	539, 1312
AcsI	RAATTY	2 cut(s)	498, 608
AcyI	GRCGYC	1 cut(s)	1175
AfaI	GTAC	3 cut(s)	512, 1202, 1790
AfiI	CCNNNNNNNGG	3 cut(s)	67, 304, 363
AflIII	ACRYGT	3 cut(s)	1036, 1108, 1922
AgsI	TTSAA	7 cut(s)	904, 913, 1004, 1123, 1252, 1306, 1649
AhdI	GACNNNNNGTC	1 cut(s)	40
AjiI	CACGTC	1 cut(s)	331
AjnI	CCWGG	2 cut(s)	641, 1222
AluBI	AGCT	8 cut(s)	636, 725, 794, 1044, 1309, 1376, 1625, 1808
AluI	AGCT	8 cut(s)	636, 725, 794, 1044, 1309, 1376, 1625, 1808
Alw21I	GWGCWC	2 cut(s)	330, 1845
Alw26I	GTCTC	2 cut(s)	76, 1865
AlwI	GGATC	4 cut(s)	515, 528, 732, 745
Ama87I	CYCGRG	3 cut(s)	23, 304, 655
Aor13HI	TCCGGA	1 cut(s)	111
AoxI	GGCC	3 cut(s)	539, 1113, 1312
ApeKI	GCWGC	3 cut(s)	764, 1085, 1808
ApoI	RAATTY	2 cut(s)	498, 608
Asp700I	GAANNNNTTC	2 cut(s)	611, 1146
AspA2I	CCTAGG	1 cut(s)	124
AspS9I	GGNCC	7 cut(s)	58, 105, 120, 308, 1114, 1523, 1595
AsuC2I	CCSGG	7 cut(s)	305, 306, 364, 525, 656, 657, 1179
AsuHPI	GGTGA	6 cut(s)	36, 190, 199, 229, 571, 1913
AvaI	CYCGRG	3 cut(s)	23, 304, 655
AvaII	GGWCC	6 cut(s)	58, 105, 120, 308, 1523, 1595
AvrII	CCTAGG	1 cut(s)	124
BaeI	ACNNNNGTAYC	2 cut(s)	1863, 1896
BalI	TGGCCA	1 cut(s)	1314
BamHI	GGATCC	2 cut(s)	520, 737
BanI	GGYRCC	1 cut(s)	359
BanII	GRGCYC	2 cut(s)	132, 189
BauI	CACGAG	1 cut(s)	575
BbsI	GAAGAC	2 cut(s)	39, 87
Bbv12I	GWGCWC	2 cut(s)	330, 1845
BbvCI	CCTCAGC	1 cut(s)	1784
BbvI	GCAGC	3 cut(s)	751, 1097, 1795
BccI	CCATC	5 cut(s)	239, 280, 284, 1160, 1946
BceAI	ACGGC	1 cut(s)	396
BcgI	CGANNNNNNTGC	2 cut(s)	349, 383
BciT130I	CCWGG	2 cut(s)	643, 1224
BclI	TGATCA	4 cut(s)	204, 219, 876, 1191
BcnI	CCSGG	7 cut(s)	305, 306, 364, 525, 656, 657, 1179
BcoDI	GTCTC	2 cut(s)	76, 1865
BfaI	CTAG	8 cut(s)	125, 249, 447, 546, 1547, 1632, 1664, 1969
BfmI	CTRYAG	2 cut(s)	789, 1701
BisI	GCNGC	3 cut(s)	765, 1086, 1809
BlnI	CCTAGG	1 cut(s)	124
BlsI	GCNGC	3 cut(s)	766, 1087, 1810
Bme1390I	CCNGG	9 cut(s)	305, 306, 364, 525, 643, 656, 657, 1179, 1224
Bme18I	GGWCC	6 cut(s)	58, 105, 120, 308, 1523, 1595
BmeRI	GACNNNNNGTC	1 cut(s)	40
BmeT110I	CYCGRG	3 cut(s)	23, 304, 655
BmgBI	CACGTC	1 cut(s)	331
BmgT120I	GGNCC	7 cut(s)	58, 105, 120, 308, 1114, 1523, 1595
BmiI	GGNNCC	7 cut(s)	122, 131, 309, 310, 361, 522, 739
BmrFI	CCNGG	9 cut(s)	305, 306, 364, 525, 643, 656, 657, 1179, 1224
BmrI	ACTGGG	1 cut(s)	904
BmsI	GCATC	3 cut(s)	1163, 1486, 1950
BmuI	ACTGGG	1 cut(s)	904
BpiI	GAAGAC	2 cut(s)	39, 87
Bpu10I	CCTNAGC	2 cut(s)	1278, 1784
BpuEI	CTTGAG	1 cut(s)	1066
BpuMI	CCSGG	7 cut(s)	305, 306, 364, 525, 656, 657, 1179
BsaAI	YACGTR	1 cut(s)	514
BsaHI	GRCGYC	1 cut(s)	1175
BsaI	GGTCTC	1 cut(s)	76
BsaJI	CCNNGG	8 cut(s)	124, 304, 524, 642, 655, 802, 958, 1463
BsaWI	WCCGGW	2 cut(s)	111, 740
BsaXI	ACNNNNNCTCC	2 cut(s)	521, 551
Bsc4I	CCNNNNNNNGG	3 cut(s)	67, 304, 363
Bse118I	RCCGGY	3 cut(s)	356, 541, 1696
Bse1I	ACTGG	6 cut(s)	431, 785, 899, 997, 1574, 1738
Bse3DI	GCAATG	1 cut(s)	254
BseAI	TCCGGA	1 cut(s)	111
BseBI	CCWGG	2 cut(s)	643, 1224
BseDI	CCNNGG	8 cut(s)	124, 304, 524, 642, 655, 802, 958, 1463
BseGI	GGATG	2 cut(s)	120, 1539
BseLI	CCNNNNNNNGG	3 cut(s)	67, 304, 363
BseMI	GCAATG	1 cut(s)	254
BseMII	CTCAG	2 cut(s)	1292, 1775
BseNI	ACTGG	6 cut(s)	431, 785, 899, 997, 1574, 1738
BseRI	GAGGAG	2 cut(s)	122, 137
BseXI	GCAGC	3 cut(s)	751, 1097, 1795
Bsh1236I	CGCG	2 cut(s)	1019, 1038
BshFI	GGCC	3 cut(s)	541, 1115, 1314
BshNI	GGYRCC	1 cut(s)	359
BsiHKAI	GWGCWC	2 cut(s)	330, 1845
BsiHKCI	CYCGRG	3 cut(s)	23, 304, 655
BslFI	GGGAC	3 cut(s)	294, 638, 1194
BslI	CCNNNNNNNGG	3 cut(s)	67, 304, 363
BsmAI	GTCTC	2 cut(s)	76, 1865
BsmBI	CGTCTC	1 cut(s)	1865
BsmFI	GGGAC	3 cut(s)	294, 638, 1194
BsmI	GAATGC	1 cut(s)	623
BsnI	GGCC	3 cut(s)	541, 1115, 1314
Bso31I	GGTCTC	1 cut(s)	76
BsoBI	CYCGRG	3 cut(s)	23, 304, 655
Bsp1286I	GDGCHC	4 cut(s)	132, 189, 330, 1845
Bsp13I	TCCGGA	1 cut(s)	111
Bsp19I	CCATGG	1 cut(s)	958
BspACI	CCGC	6 cut(s)	61, 178, 1017, 1531, 1598, 1838
BspANI	GGCC	3 cut(s)	541, 1115, 1314
BspCNI	CTCAG	2 cut(s)	1291, 1776
BspEI	TCCGGA	1 cut(s)	111
BspFNI	CGCG	2 cut(s)	1019, 1038
BspLI	GGNNCC	7 cut(s)	122, 131, 309, 310, 361, 522, 739
BspPI	GGATC	4 cut(s)	515, 528, 732, 745
BspT107I	GGYRCC	1 cut(s)	359
BspTNI	GGTCTC	1 cut(s)	76
BsrBI	CCGCTC	1 cut(s)	1600
BsrDI	GCAATG	1 cut(s)	254
BsrFI	RCCGGY	3 cut(s)	356, 541, 1696
BsrI	ACTGG	6 cut(s)	431, 785, 899, 997, 1574, 1738
BssAI	RCCGGY	3 cut(s)	356, 541, 1696
BssECI	CCNNGG	8 cut(s)	124, 304, 524, 642, 655, 802, 958, 1463
BssNI	GRCGYC	1 cut(s)	1175
BssSI	CACGAG	1 cut(s)	575
BssT1I	CCWWGG	4 cut(s)	124, 802, 958, 1463
Bst2BI	CACGAG	1 cut(s)	575
Bst2UI	CCWGG	2 cut(s)	643, 1224
Bst4CI	ACNGT	7 cut(s)	70, 838, 889, 1369, 1384, 1779, 1910
Bst6I	CTCTTC	2 cut(s)	943, 1124
BstACI	GRCGYC	1 cut(s)	1175
BstBAI	YACGTR	1 cut(s)	514
BstC8I	GCNNGC	3 cut(s)	358, 543, 1017
BstDEI	CTNAG	4 cut(s)	551, 1278, 1784, 1813
BstDSI	CCRYGG	1 cut(s)	958
BstF5I	GGATG	2 cut(s)	120, 1539
BstFNI	CGCG	2 cut(s)	1019, 1038
BstMAI	GTCTC	2 cut(s)	76, 1865
BstMWI	GCNNNNNNNGC	1 cut(s)	1835
BstNI	CCWGG	2 cut(s)	643, 1224
BstNSI	RCATGY	3 cut(s)	1015, 1112, 1926
BstSCI	CCNGG	9 cut(s)	303, 304, 362, 523, 641, 654, 655, 1177, 1222
BstSFI	CTRYAG	2 cut(s)	789, 1701
BstUI	CGCG	2 cut(s)	1019, 1038
BstV1I	GCAGC	3 cut(s)	751, 1097, 1795
BstV2I	GAAGAC	2 cut(s)	39, 87
BstX2I	RGATCY	2 cut(s)	520, 737
BstYI	RGATCY	2 cut(s)	520, 737
BsuRI	GGCC	3 cut(s)	541, 1115, 1314
BtgI	CCRYGG	1 cut(s)	958
BtrI	CACGTC	1 cut(s)	331
BtsCI	GGATG	2 cut(s)	120, 1539
BtsIMutI	CAGTG	3 cut(s)	424, 834, 1906
Cac8I	GCNNGC	3 cut(s)	358, 543, 1017
Cfr10I	RCCGGY	3 cut(s)	356, 541, 1696
Cfr13I	GGNCC	7 cut(s)	58, 105, 120, 308, 1114, 1523, 1595
Cfr9I	CCCGGG	2 cut(s)	304, 655
CseI	GACGC	4 cut(s)	130, 246, 1044, 1183
Csp6I	GTAC	3 cut(s)	511, 1201, 1789
CviQI	GTAC	3 cut(s)	511, 1201, 1789
DdeI	CTNAG	4 cut(s)	551, 1278, 1784, 1813
DriI	GACNNNNNGTC	1 cut(s)	40
EaeI	YGGCCR	2 cut(s)	539, 1312
Eam1104I	CTCTTC	2 cut(s)	943, 1124
Eam1105I	GACNNNNNGTC	1 cut(s)	40
EarI	CTCTTC	2 cut(s)	943, 1124
Eco130I	CCWWGG	4 cut(s)	124, 802, 958, 1463
Eco24I	GRGCYC	2 cut(s)	132, 189
Eco31I	GGTCTC	1 cut(s)	76
Eco32I	GATATC	1 cut(s)	435
Eco47I	GGWCC	6 cut(s)	58, 105, 120, 308, 1523, 1595
Eco88I	CYCGRG	3 cut(s)	23, 304, 655
EcoO109I	RGGNCCY	1 cut(s)	308
EcoRI	GAATTC	1 cut(s)	498
EcoRII	CCWGG	2 cut(s)	641, 1222
EcoRV	GATATC	1 cut(s)	435
EcoT14I	CCWWGG	4 cut(s)	124, 802, 958, 1463
EcoT38I	GRGCYC	2 cut(s)	132, 189
ErhI	CCWWGG	4 cut(s)	124, 802, 958, 1463
Esp3I	CGTCTC	1 cut(s)	1865
FaqI	GGGAC	3 cut(s)	294, 638, 1194
FauI	CCCGC	1 cut(s)	1024
FauNDI	CATATG	4 cut(s)	629, 1069, 1258, 1430
FbaI	TGATCA	4 cut(s)	204, 219, 876, 1191
FblI	GTMKAC	2 cut(s)	891, 1965
Fnu4HI	GCNGC	3 cut(s)	765, 1086, 1809
FokI	GGATG	2 cut(s)	127, 1546
FriOI	GRGCYC	2 cut(s)	132, 189
Fsp4HI	GCNGC	3 cut(s)	765, 1086, 1809
FspBI	CTAG	8 cut(s)	125, 249, 447, 546, 1547, 1632, 1664, 1969
GluI	GCNGC	3 cut(s)	765, 1086, 1809
HaeIII	GGCC	3 cut(s)	541, 1115, 1314
HgaI	GACGC	4 cut(s)	130, 246, 1044, 1183
Hin1I	GRCGYC	1 cut(s)	1175
HincII	GTYRAC	2 cut(s)	1387, 1436
HindII	GTYRAC	2 cut(s)	1387, 1436
HindIII	AAGCTT	2 cut(s)	1042, 1307
HinfI	GANTC	5 cut(s)	454, 953, 1234, 1327, 1645
HphI	GGTGA	6 cut(s)	36, 190, 199, 229, 571, 1913
Hpy166II	GTNNAC	8 cut(s)	120, 562, 892, 1387, 1436, 1711, 1904, 1966
Hpy188I	TCNGA	5 cut(s)	236, 267, 371, 506, 943
Hpy188III	TCNNGA	6 cut(s)	73, 112, 334, 600, 616, 776
Hpy8I	GTNNAC	8 cut(s)	120, 562, 892, 1387, 1436, 1711, 1904, 1966
Hpy99I	CGWCG	1 cut(s)	53
HpyAV	CCTTC	8 cut(s)	104, 118, 163, 175, 199, 316, 1122, 1670
HpyCH4III	ACNGT	7 cut(s)	70, 838, 889, 1369, 1384, 1779, 1910
HpyCH4IV	ACGT	4 cut(s)	330, 513, 975, 1188
HpyCH4V	TGCA	9 cut(s)	623, 767, 848, 1085, 1154, 1400, 1589, 1618, 1895
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1835
HpyF3I	CTNAG	4 cut(s)	551, 1278, 1784, 1813
HpySE526I	ACGT	4 cut(s)	330, 513, 975, 1188
Hsp92I	GRCGYC	1 cut(s)	1175
KflI	GGGWCCC	1 cut(s)	308
Kpn2I	TCCGGA	1 cut(s)	111
KroI	GCCGGC	2 cut(s)	356, 541
KroNI	GCCGGC	2 cut(s)	358, 543
Ksp22I	TGATCA	4 cut(s)	204, 219, 876, 1191
LmnI	GCTCC	2 cut(s)	135, 325
Lsp1109I	GCAGC	3 cut(s)	751, 1097, 1795
LweI	GCATC	3 cut(s)	1163, 1486, 1950
MaeI	CTAG	8 cut(s)	125, 249, 447, 546, 1547, 1632, 1664, 1969
MaeII	ACGT	4 cut(s)	330, 513, 975, 1188
MaeIII	GTNAC	3 cut(s)	42, 718, 1918
MbiI	CCGCTC	1 cut(s)	1600
MfeI	CAATTG	2 cut(s)	984, 1717
MflI	RGATCY	2 cut(s)	520, 737
MhlI	GDGCHC	4 cut(s)	132, 189, 330, 1845
MlsI	TGGCCA	1 cut(s)	1314
MluI	ACGCGT	1 cut(s)	1036
MluNI	TGGCCA	1 cut(s)	1314
MmeI	TCCRAC	4 cut(s)	431, 680, 1801, 1952
MnlI	CCTC	9 cut(s)	19, 143, 155, 158, 167, 308, 1127, 1461, 1779
Mox20I	TGGCCA	1 cut(s)	1314
MroI	TCCGGA	1 cut(s)	111
MroNI	GCCGGC	2 cut(s)	356, 541
MroXI	GAANNNNTTC	2 cut(s)	611, 1146
MscI	TGGCCA	1 cut(s)	1314
MseI	TTAA	5 cut(s)	315, 411, 840, 1239, 1859
MslI	CAYNNNNRTG	4 cut(s)	200, 215, 628, 1838
Msp20I	TGGCCA	1 cut(s)	1314
MspA1I	CMGCKG	1 cut(s)	1808
MspR9I	CCNGG	9 cut(s)	305, 306, 364, 525, 643, 656, 657, 1179, 1224
MunI	CAATTG	2 cut(s)	984, 1717
Mva1269I	GAATGC	1 cut(s)	623
MvaI	CCWGG	2 cut(s)	643, 1224
MvnI	CGCG	2 cut(s)	1019, 1038
MwoI	GCNNNNNNNGC	1 cut(s)	1835
NaeI	GCCGGC	2 cut(s)	358, 543
NciI	CCSGG	7 cut(s)	305, 306, 364, 525, 656, 657, 1179
NcoI	CCATGG	1 cut(s)	958
NdeI	CATATG	4 cut(s)	629, 1069, 1258, 1430
NgoMIV	GCCGGC	2 cut(s)	356, 541
NlaIV	GGNNCC	7 cut(s)	122, 131, 309, 310, 361, 522, 739
NmuCI	GTSAC	1 cut(s)	42
NspI	RCATGY	3 cut(s)	1015, 1112, 1926
PaeR7I	CTCGAG	1 cut(s)	23
PciI	ACATGT	2 cut(s)	1108, 1922
PcsI	WCGNNNNNNNCGW	1 cut(s)	1875
PctI	GAATGC	1 cut(s)	623
PdiI	GCCGGC	2 cut(s)	358, 543
PdmI	GAANNNNTTC	2 cut(s)	611, 1146
PfeI	GAWTC	5 cut(s)	454, 953, 1234, 1327, 1645
PkrI	GCNGC	3 cut(s)	766, 1087, 1810
Ppu21I	YACGTR	1 cut(s)	514
PpuMI	RGGWCCY	1 cut(s)	308
PscI	ACATGT	2 cut(s)	1108, 1922
Psp1406I	AACGTT	1 cut(s)	975
Psp5II	RGGWCCY	1 cut(s)	308
Psp6I	CCWGG	2 cut(s)	641, 1222
PspGI	CCWGG	2 cut(s)	641, 1222
PspN4I	GGNNCC	7 cut(s)	122, 131, 309, 310, 361, 522, 739
PspPI	GGNCC	7 cut(s)	58, 105, 120, 308, 1114, 1523, 1595
PspPPI	RGGWCCY	1 cut(s)	308
PspXI	VCTCGAGB	1 cut(s)	23
PsuI	RGATCY	2 cut(s)	520, 737
PvuII	CAGCTG	1 cut(s)	1808
RsaI	GTAC	3 cut(s)	512, 1202, 1790
RsaNI	GTAC	3 cut(s)	511, 1201, 1789
RseI	CAYNNNNRTG	4 cut(s)	200, 215, 628, 1838
SaqAI	TTAA	5 cut(s)	315, 411, 840, 1239, 1859
SatI	GCNGC	3 cut(s)	765, 1086, 1809
Sau96I	GGNCC	7 cut(s)	58, 105, 120, 308, 1114, 1523, 1595
ScrFI	CCNGG	9 cut(s)	305, 306, 364, 525, 643, 656, 657, 1179, 1224
SduI	GDGCHC	4 cut(s)	132, 189, 330, 1845
SfaNI	GCATC	3 cut(s)	1163, 1486, 1950
SfcI	CTRYAG	2 cut(s)	789, 1701
Sfr274I	CTCGAG	1 cut(s)	23
SinI	GGWCC	6 cut(s)	58, 105, 120, 308, 1523, 1595
SlaI	CTCGAG	1 cut(s)	23
SmaI	CCCGGG	2 cut(s)	306, 657
SmiMI	CAYNNNNRTG	4 cut(s)	200, 215, 628, 1838
SmlI	CTYRAG	2 cut(s)	23, 1045
SmoI	CTYRAG	2 cut(s)	23, 1045
SsiI	CCGC	6 cut(s)	61, 178, 1017, 1531, 1598, 1838
SspMI	CTAG	8 cut(s)	125, 249, 447, 546, 1547, 1632, 1664, 1969
StyD4I	CCNGG	9 cut(s)	303, 304, 362, 523, 641, 654, 655, 1177, 1222
StyI	CCWWGG	4 cut(s)	124, 802, 958, 1463
TaaI	ACNGT	7 cut(s)	70, 838, 889, 1369, 1384, 1779, 1910
TaiI	ACGT	4 cut(s)	333, 516, 978, 1191
TaqI	TCGA	6 cut(s)	24, 51, 74, 284, 1157, 1483
TfiI	GAWTC	5 cut(s)	454, 953, 1234, 1327, 1645
Tru1I	TTAA	5 cut(s)	315, 411, 840, 1239, 1859
Tru9I	TTAA	5 cut(s)	315, 411, 840, 1239, 1859
TscAI	CASTG	3 cut(s)	431, 841, 1913
TseFI	GTSAC	1 cut(s)	42
TseI	GCWGC	3 cut(s)	764, 1085, 1808
Tsp45I	GTSAC	1 cut(s)	42
TspMI	CCCGGG	2 cut(s)	304, 655
TspRI	CASTG	3 cut(s)	431, 841, 1913
VpaK11BI	GGWCC	6 cut(s)	58, 105, 120, 308, 1523, 1595
XapI	RAATTY	2 cut(s)	498, 608
XceI	RCATGY	3 cut(s)	1015, 1112, 1926
XcmI	CCANNNNNNNNNTGG	4 cut(s)	283, 475, 891, 1566
XhoI	CTCGAG	1 cut(s)	23
XmaI	CCCGGG	2 cut(s)	304, 655
XmaJI	CCTAGG	1 cut(s)	124
XmiI	GTMKAC	2 cut(s)	891, 1965
XmnI	GAANNNNTTC	2 cut(s)	611, 1146
XspI	CTAG	8 cut(s)	125, 249, 447, 546, 1547, 1632, 1664, 1969

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.