Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0003716

Physical Location & Seq

Genomic Coordinates Reverse (-)

34856662 .. 34863929

Gene Structure 7268 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g34960.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2232 bp

ATGGGCACCCAGGCCACCACCCTAGAAGTGGAGGCCGCTGCTAAAACTAAGCTCGATGAGAGTGAGAACGACGATGACGTGTCACCAGTTGAGCAGGTCCGACTCACGGTCTCCAACGAGGACGACAGTTCCCTCCCTGTATGGACGTTCCGGATGTGGACTATAGGCATGCTCTCGTGCATTCTACTCTCATTCCTCAACACCTTCTTCTCTTACCGCACGGAGCCGCTCGTGATATCGATGATCTCCGTGCAGGTGGCGAGTCTGCCGATCGGACGGTTCATGGCTAGGGCGCTGCCGAGGAGAAAGGTTTGGATTCGTGGGAAGTCATACTCGTTGAACCCGGGGGAATTTAACGTAAAAGAGCACGTGCTGATTTCGATATTTGCAAACGCCGGAGCCGGGTTTGGTAGCGGACCGGCGTATGCGGTTAATATTGTGACTATAATCAAAGCGTTTTACGGTAGGAAGATATCCTTCTTTGCAAGTTGGGCACTTGTGATTACCACACAGGTATTGGGGTACGGGTGGGCTGGTATTATCAGAAAGTACGTGGTGGATCCGGGGGCGATGTGGTGGCCTAGCAGTCTCGTTCAGGTTTCTTTGTTCAGGGCTCTGCATGAGAAAGACAACAATCGAATGTCGAGAGGGAAATTCTTTTTGATAGCACTGGTGTGCAGCTTCTCTTGGTACCTAGTGCCGGGCTACCTCTTCACAACCCTCTCAATAATTTCATGGATCTGTTGGATTTACCCTAAGTCCATAAGAGCTCAGCAAATTGGCTCAGGCTACCGTGGGCTTGGCGTTGGGGCATTTACCCTAGATTGGTCGGTCATATCCTCTTACTTGGGGAGCCCTTTGATCAGCCCCTTCTTTGCCATTGTCAATATCACCGTCGGATACATCATCATCATGTACGTCGTCATTCCAATTTCATACTGGAAGCTCAACTTGTACAATGCAAAGAATTTTGCAATCTTCTCTTCGCACTTGTTTGATTCCGACGGCCAAATATATAATGTCAAAGGCATTGTGAATGACCGGTTTCAGATTGACATGCCTGCCTATAAAAAACAAGGATTCATAAACCTGAGTGTATTCTTTGCCCTAACATATGGCCTTGGTTTTGCTGCTGTTGTATCAACCCTCACTCATGTGGCTCTCTTCAATGGAAGGGACATATATGAACGATACCAATCGTCATATAGTGGAAAGATAGATATACACACCAAATTAATGAGGAAATACAGGGACATACCCAGCTGGTGGTTTCATATTTTGCTTGTGGTGTCGTTGGTATTCTCTCTAGCATTGTGCATTTTCATGAAAGATGAGGTGCAAATGCCATGGTGGGGACTCACTTTTGCTGCAGGAATTGCATTGATTTTCACCCTTCCAATCAGCATAATAACTGCCACAACAAACGTGACACCGGGACTAAACATCATCACGGAGTACGTCATGGGTTTGATATTGCCTGGCTATCCCATAGCCAATGTATGCTTCAAAACATATGGATACATTAGTATGGCACAGGCAATTTCATTTTTGAGTGATTTTAAGTTAGGCCATTACATGAAGATTCCGCCCATATCCATGTTCTTAGTTCAGTGCGTAGGAACTGTAGTAGCCGGAACCGTCAATATTGGGACAGCATGGTGGCTTCTAACTACAGTGAAAAATATATGCAATACTGAATTACTCCCTGACACTAGTCCTTGGACTTGTCCTGGTGATAGTGTCTTCTTCAATGCATCTGTGATTTGGGGTCTGGTTGGACCGAAACGAATCTTCGGTTCCCTCGGACTCTACGGAGGACTCAACTGGTTCTTCGTGGTAGGTGCACTCGGACCTGTCATAGTATGGTTGTTTCACAAAGCTTTCCCCAGACAGAAATGGATCGCCTACATCAACCTTCCAGTGCTTTTCGGATCAACCGCCGTGATGCCACCAGCTACAACTGTGAACTTTAACAGCTGGATTGTGGTCGGAATCGTTTTCAATTACTTTGTTTTCAGATACAGAAAGAAGTGGTGGCAGAGGTACAATTATGTTCTTTCTGCTGCCCTAGATGCTGGAGTGGCTTTTATGGGGGTGCTTATATACATATGTTTAACCATAAACGAGGTAAGCATTTCTTGGTGGGGTACACAAGACTATGACCACTGTAAATTGTCTACTTGTCCAACATCTAAGAGCGTAGAACTTGGTCATGCTTGTGTATTCCCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006857 GO:0008150 GO:0015833 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

744

Amino Acids

83.41

Weight (kDa)

9.18

Isoelectric Point (pI)

25.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003716)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09930
fragaria_vesca	FvH4_5g34010 FvH4_5g34011
malus_domestica	MD08G1206700.v1.1 MD15G1390200.v1.1 MD15G1390400.v1.1
prunus_persica	Prupe.1G539200_v2.0.a1 Prupe.1G539300_v2.0.a1
pyrus_communis	pycom15g34950 pycom15g34960
rosa_chinensis	RchiOBHm_Chr7g0233451 RchiOBHm_Chr7g0233471
rosa_laevigata	RLG00000001268 RLG00000001269
rosa_multiflora	Rmu_sc0000029.1_g000038 Rmu_sc0000029.1_g000051
rosa_roxburghii	Rroxscaffold_3G00227270 Rroxscaffold_3G00227290
rosa_rugosa	Rorug07G0280800 Rorug07G0280800
rosa_samantha	Rh7AG436600 Rh7AG436700 Rh7BG409700 Rh7BG409800 Rh7CG456500 Rh7CG456700 Rh7DG425800 Rh7DG425900
rosa_wichuraiana	Rw0G008530 Rw0G022500 Rw7G036000 Rw7G036010 Rw7G036030 Rw7G036040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	244
Acc36I	ACCTGC	2 cut(s)	85, 244
Acc65I	GGTACC	1 cut(s)	690
AccB1I	GGYRCC	2 cut(s)	5, 690
AccB7I	CCANNNNNTGG	1 cut(s)	1266
AccBSI	CCGCTC	1 cut(s)	229
AccI	GTMKAC	1 cut(s)	2177
AccIII	TCCGGA	1 cut(s)	150
AciI	CCGC	7 cut(s)	36, 217, 227, 414, 428, 1586, 1938
AclWI	GGATC	5 cut(s)	554, 567, 746, 1907, 1939
AcoI	YGGCCR	1 cut(s)	1006
AcsI	RAATTY	3 cut(s)	350, 653, 967
AcvI	CACGTG	1 cut(s)	370
AfaI	GTAC	8 cut(s)	524, 551, 692, 917, 956, 1457, 2045, 2149
AfiI	CCNNNNNNNGG	7 cut(s)	28, 106, 402, 700, 825, 1266, 1352
AflIII	ACRYGT	1 cut(s)	78
AgeI	ACCGGT	1 cut(s)	1041
AgsI	TTSAA	5 cut(s)	340, 1168, 1507, 1750, 2002
AhdI	GACNNNNNGTC	1 cut(s)	107
AhlI	ACTAGT	1 cut(s)	1712
AjiI	CACGTC	1 cut(s)	79
AjnI	CCWGG	3 cut(s)	9, 1477, 1729
AjuI	GAANNNNNNNTTGG	2 cut(s)	1487, 1519
AleI	CACNNNNGTG	2 cut(s)	673, 1154
AluBI	AGCT	8 cut(s)	52, 681, 770, 946, 1263, 1880, 1955, 1977
AluI	AGCT	8 cut(s)	52, 681, 770, 946, 1263, 1880, 1955, 1977
Alw21I	GWGCWC	3 cut(s)	369, 772, 1846
Alw26I	GTCTC	2 cut(s)	115, 593
Alw44I	GTGCAC	1 cut(s)	1842
AlwI	GGATC	5 cut(s)	554, 567, 746, 1907, 1939
Ama87I	CYCGRG	1 cut(s)	343
Aor13HI	TCCGGA	1 cut(s)	150
AoxI	GGCC	6 cut(s)	12, 33, 578, 1006, 1117, 1567
ApaLI	GTGCAC	1 cut(s)	1842
ApeKI	GCWGC	6 cut(s)	38, 295, 678, 1130, 1367, 2063
ApoI	RAATTY	3 cut(s)	350, 653, 967
AseI	ATTAAT	1 cut(s)	1235
AsiGI	ACCGGT	1 cut(s)	1041
Asp718I	GGTACC	1 cut(s)	690
AspLEI	GCGC	1 cut(s)	295
AspS9I	GGNCC	4 cut(s)	97, 416, 1778, 1850
AsuC2I	CCSGG	6 cut(s)	344, 345, 403, 564, 702, 1434
AsuHPI	GGTGA	4 cut(s)	75, 883, 1381, 1745
AvaI	CYCGRG	1 cut(s)	343
AvaII	GGWCC	4 cut(s)	97, 416, 1778, 1850
BaeGI	GKGCMC	3 cut(s)	8, 496, 1846
BaeI	ACNNNNGTAYC	2 cut(s)	1510, 1543
BamHI	GGATCC	1 cut(s)	559
BanI	GGYRCC	2 cut(s)	5, 690
BanII	GRGCYC	3 cut(s)	616, 772, 857
BauI	CACGAG	2 cut(s)	175, 230
BbrPI	CACGTG	1 cut(s)	370
BbsI	GAAGAC	1 cut(s)	1735
Bbv12I	GWGCWC	3 cut(s)	369, 772, 1846
BbvI	GCAGC	6 cut(s)	25, 282, 690, 1117, 1354, 2050
BceAI	ACGGC	2 cut(s)	1021, 1925
BciT130I	CCWGG	3 cut(s)	11, 1479, 1731
BciVI	GTATCC	2 cut(s)	893, 1511
BclI	TGATCA	1 cut(s)	861
BcnI	CCSGG	6 cut(s)	344, 345, 403, 564, 702, 1434
BcoDI	GTCTC	2 cut(s)	115, 593
BcuI	ACTAGT	1 cut(s)	1712
BfaI	CTAG	8 cut(s)	23, 288, 582, 695, 821, 1307, 1713, 2069
BfmI	CTRYAG	4 cut(s)	162, 1368, 1623, 1671
BfoI	RGCGCY	1 cut(s)	296
BfuAI	ACCTGC	2 cut(s)	85, 244
BfuI	GTATCC	2 cut(s)	893, 1511
BisI	GCNGC	8 cut(s)	36, 39, 227, 296, 679, 1131, 1368, 2064
BlpI	GCTNAGC	1 cut(s)	771
BlsI	GCNGC	8 cut(s)	37, 40, 228, 297, 680, 1132, 1369, 2065
Bme1390I	CCNGG	9 cut(s)	11, 344, 345, 403, 564, 702, 1434, 1479, 1731
Bme18I	GGWCC	4 cut(s)	97, 416, 1778, 1850
BmeRI	GACNNNNNGTC	1 cut(s)	107
BmeT110I	CYCGRG	1 cut(s)	343
BmgBI	CACGTC	1 cut(s)	79
BmgT120I	GGNCC	4 cut(s)	97, 416, 1778, 1850
BmiI	GGNNCC	8 cut(s)	7, 225, 400, 561, 692, 854, 1636, 1798
BmrFI	CCNGG	9 cut(s)	11, 344, 345, 403, 564, 702, 1434, 1479, 1731
BmsI	GCATC	3 cut(s)	1763, 1935, 2062
BoxI	GACNNNNGTC	1 cut(s)	1713
BpiI	GAAGAC	1 cut(s)	1735
BpmI	CTGGAG	1 cut(s)	2097
Bpu10I	CCTNAGC	1 cut(s)	784
Bpu1102I	GCTNAGC	1 cut(s)	771
BpuMI	CCSGG	6 cut(s)	344, 345, 403, 564, 702, 1434
Bsa29I	ATCGAT	1 cut(s)	239
BsaAI	YACGTR	2 cut(s)	370, 553
BsaBI	GATNNNNATC	1 cut(s)	1195
BsaI	GGTCTC	1 cut(s)	115
BsaWI	WCCGGW	2 cut(s)	150, 1041
Bsc4I	CCNNNNNNNGG	7 cut(s)	28, 106, 402, 700, 825, 1266, 1352
Bse118I	RCCGGY	2 cut(s)	418, 1041
Bse1I	ACTGG	5 cut(s)	86, 675, 944, 1829, 1919
Bse8I	GATNNNNATC	1 cut(s)	1195
BseAI	TCCGGA	1 cut(s)	150
BseBI	CCWGG	3 cut(s)	11, 1479, 1731
BseCI	ATCGAT	1 cut(s)	239
BseGI	GGATG	1 cut(s)	159
BseJI	GATNNNNATC	1 cut(s)	1195
BseLI	CCNNNNNNNGG	7 cut(s)	28, 106, 402, 700, 825, 1266, 1352
BseMII	CTCAG	3 cut(s)	785, 798, 1082
BseNI	ACTGG	5 cut(s)	86, 675, 944, 1829, 1919
BseRI	GAGGAG	1 cut(s)	316
BseSI	GKGCMC	3 cut(s)	8, 496, 1846
BseXI	GCAGC	6 cut(s)	25, 282, 690, 1117, 1354, 2050
BseYI	CCCAGC	1 cut(s)	1259
BsgI	GTGCAG	2 cut(s)	272, 697
Bsh1285I	CGRYCG	1 cut(s)	273
BshFI	GGCC	6 cut(s)	14, 35, 580, 1008, 1119, 1569
BshNI	GGYRCC	2 cut(s)	5, 690
BshTI	ACCGGT	1 cut(s)	1041
BshVI	ATCGAT	1 cut(s)	239
BsiEI	CGRYCG	1 cut(s)	273
BsiHKAI	GWGCWC	3 cut(s)	369, 772, 1846
BsiHKCI	CYCGRG	1 cut(s)	343
BslFI	GGGAC	5 cut(s)	1190, 1265, 1368, 1449, 1663
BslI	CCNNNNNNNGG	7 cut(s)	28, 106, 402, 700, 825, 1266, 1352
BsmAI	GTCTC	2 cut(s)	115, 593
BsmFI	GGGAC	5 cut(s)	1190, 1265, 1368, 1449, 1663
BsmI	GAATGC	1 cut(s)	180
BsnI	GGCC	6 cut(s)	14, 35, 580, 1008, 1119, 1569
Bso31I	GGTCTC	1 cut(s)	115
BsoBI	CYCGRG	1 cut(s)	343
Bsp1286I	GDGCHC	7 cut(s)	8, 369, 496, 616, 772, 857, 1846
Bsp13I	TCCGGA	1 cut(s)	150
Bsp1407I	TGTACA	1 cut(s)	954
Bsp143I	GATC	7 cut(s)	243, 270, 559, 738, 861, 1899, 1931
Bsp1720I	GCTNAGC	1 cut(s)	771
Bsp19I	CCATGG	1 cut(s)	1346
BspACI	CCGC	7 cut(s)	36, 217, 227, 414, 428, 1586, 1938
BspANI	GGCC	6 cut(s)	14, 35, 580, 1008, 1119, 1569
BspCNI	CTCAG	3 cut(s)	784, 797, 1083
BspDI	ATCGAT	1 cut(s)	239
BspEI	TCCGGA	1 cut(s)	150
BspHI	TCATGA	1 cut(s)	1323
BspLI	GGNNCC	8 cut(s)	7, 225, 400, 561, 692, 854, 1636, 1798
BspMAI	CTGCAG	1 cut(s)	1372
BspMI	ACCTGC	2 cut(s)	85, 244
BspPI	GGATC	5 cut(s)	554, 567, 746, 1907, 1939
BspT107I	GGYRCC	2 cut(s)	5, 690
BspTNI	GGTCTC	1 cut(s)	115
BsrBI	CCGCTC	1 cut(s)	229
BsrFI	RCCGGY	2 cut(s)	418, 1041
BsrGI	TGTACA	1 cut(s)	954
BsrI	ACTGG	5 cut(s)	86, 675, 944, 1829, 1919
BssAI	RCCGGY	2 cut(s)	418, 1041
BssMI	GATC	7 cut(s)	243, 270, 559, 738, 861, 1899, 1931
BssSI	CACGAG	2 cut(s)	175, 230
BssT1I	CCWWGG	3 cut(s)	1120, 1346, 1718
Bst2BI	CACGAG	2 cut(s)	175, 230
Bst2UI	CCWGG	3 cut(s)	11, 1479, 1731
Bst6I	CTCTTC	3 cut(s)	716, 988, 1169
BstAPI	GCANNNNNTGC	1 cut(s)	1376
BstAUI	TGTACA	1 cut(s)	954
BstBAI	YACGTR	2 cut(s)	370, 553
BstC8I	GCNNGC	2 cut(s)	170, 1062
BstDEI	CTNAG	7 cut(s)	48, 756, 771, 784, 1091, 1603, 2193
BstDSI	CCRYGG	2 cut(s)	793, 1346
BstF5I	GGATG	1 cut(s)	159
BstH2I	RGCGCY	1 cut(s)	296
BstHHI	GCGC	1 cut(s)	295
BstKTI	GATC	7 cut(s)	246, 273, 562, 741, 864, 1902, 1934
BstMAI	GTCTC	2 cut(s)	115, 593
BstMBI	GATC	7 cut(s)	243, 270, 559, 738, 861, 1899, 1931
BstMCI	CGRYCG	1 cut(s)	273
BstMWI	GCNNNNNNNGC	4 cut(s)	491, 1376, 2072, 2081
BstNI	CCWGG	3 cut(s)	11, 1479, 1731
BstNSI	RCATGY	2 cut(s)	172, 1060
BstPAI	GACNNNNGTC	1 cut(s)	1713
BstSCI	CCNGG	9 cut(s)	9, 342, 343, 401, 562, 700, 1432, 1477, 1729
BstSFI	CTRYAG	4 cut(s)	162, 1368, 1623, 1671
BstSLI	GKGCMC	3 cut(s)	8, 496, 1846
BstV1I	GCAGC	6 cut(s)	25, 282, 690, 1117, 1354, 2050
BstV2I	GAAGAC	1 cut(s)	1735
BstX2I	RGATCY	2 cut(s)	559, 738
BstYI	RGATCY	2 cut(s)	559, 738
Bsu15I	ATCGAT	1 cut(s)	239
BsuI	GTATCC	2 cut(s)	893, 1511
BsuRI	GGCC	6 cut(s)	14, 35, 580, 1008, 1119, 1569
BsuTUI	ATCGAT	1 cut(s)	239
BtgI	CCRYGG	2 cut(s)	793, 1346
BtgZI	GCGATG	1 cut(s)	584
BtrI	CACGTC	1 cut(s)	79
BtsCI	GGATG	1 cut(s)	159
BtsIMutI	CAGTG	5 cut(s)	668, 1616, 1680, 1926, 2164
BveI	ACCTGC	2 cut(s)	85, 244
Cac8I	GCNNGC	2 cut(s)	170, 1062
CciI	TCATGA	1 cut(s)	1323
CfoI	GCGC	1 cut(s)	295
Cfr10I	RCCGGY	2 cut(s)	418, 1041
Cfr13I	GGNCC	4 cut(s)	97, 416, 1778, 1850
Cfr9I	CCCGGG	1 cut(s)	343
ClaI	ATCGAT	1 cut(s)	239
CpoI	CGGWCCG	1 cut(s)	416
Csp6I	GTAC	8 cut(s)	523, 550, 691, 916, 955, 1456, 2044, 2148
CspAI	ACCGGT	1 cut(s)	1041
CspI	CGGWCCG	1 cut(s)	416
CviQI	GTAC	8 cut(s)	523, 550, 691, 916, 955, 1456, 2044, 2148
DdeI	CTNAG	7 cut(s)	48, 756, 771, 784, 1091, 1603, 2193
DpnI	GATC	7 cut(s)	245, 272, 561, 740, 863, 1901, 1933
DpnII	GATC	7 cut(s)	243, 270, 559, 738, 861, 1899, 1931
DriI	GACNNNNNGTC	1 cut(s)	107
EaeI	YGGCCR	1 cut(s)	1006
Eam1104I	CTCTTC	3 cut(s)	716, 988, 1169
Eam1105I	GACNNNNNGTC	1 cut(s)	107
EarI	CTCTTC	3 cut(s)	716, 988, 1169
EciI	GGCGGA	1 cut(s)	1575
Ecl136II	GAGCTC	1 cut(s)	770
Eco130I	CCWWGG	3 cut(s)	1120, 1346, 1718
Eco24I	GRGCYC	3 cut(s)	616, 772, 857
Eco31I	GGTCTC	1 cut(s)	115
Eco32I	GATATC	2 cut(s)	237, 474
Eco47I	GGWCC	4 cut(s)	97, 416, 1778, 1850
Eco53kI	GAGCTC	1 cut(s)	770
Eco72I	CACGTG	1 cut(s)	370
Eco88I	CYCGRG	1 cut(s)	343
EcoICRI	GAGCTC	1 cut(s)	770
EcoRII	CCWGG	3 cut(s)	9, 1477, 1729
EcoRV	GATATC	2 cut(s)	237, 474
EcoT14I	CCWWGG	3 cut(s)	1120, 1346, 1718
EcoT22I	ATGCAT	1 cut(s)	1756
EcoT38I	GRGCYC	3 cut(s)	616, 772, 857
ErhI	CCWWGG	3 cut(s)	1120, 1346, 1718
FalI	AAGNNNNNCTT	6 cut(s)	461, 493, 935, 967, 2122, 2154
FaqI	GGGAC	5 cut(s)	1190, 1265, 1368, 1449, 1663
FauNDI	CATATG	3 cut(s)	1114, 1513, 2108
FbaI	TGATCA	1 cut(s)	861
FblI	GTMKAC	1 cut(s)	2177
Fnu4HI	GCNGC	8 cut(s)	36, 39, 227, 296, 679, 1131, 1368, 2064
FokI	GGATG	1 cut(s)	166
FriOI	GRGCYC	3 cut(s)	616, 772, 857
Fsp4HI	GCNGC	8 cut(s)	36, 39, 227, 296, 679, 1131, 1368, 2064
FspBI	CTAG	8 cut(s)	23, 288, 582, 695, 821, 1307, 1713, 2069
GlaI	GCGC	1 cut(s)	294
GluI	GCNGC	8 cut(s)	36, 39, 227, 296, 679, 1131, 1368, 2064
GsaI	CCCAGC	1 cut(s)	1263
GsuI	CTGGAG	1 cut(s)	2097
HaeII	RGCGCY	1 cut(s)	296
HaeIII	GGCC	6 cut(s)	14, 35, 580, 1008, 1119, 1569
HhaI	GCGC	1 cut(s)	295
Hin6I	GCGC	1 cut(s)	293
HinP1I	GCGC	1 cut(s)	293
HindIII	AAGCTT	1 cut(s)	1878
HphI	GGTGA	4 cut(s)	75, 883, 1381, 1745
Hpy166II	GTNNAC	5 cut(s)	159, 1844, 1966, 2150, 2178
Hpy188III	TCNNGA	4 cut(s)	151, 232, 645, 1324
Hpy8I	GTNNAC	5 cut(s)	159, 1844, 1966, 2150, 2178
Hpy99I	CGWCG	4 cut(s)	74, 899, 923, 1007
HpyAV	CCTTC	6 cut(s)	214, 487, 880, 1167, 1403, 1925
HpyCH4IV	ACGT	8 cut(s)	78, 146, 357, 369, 552, 918, 1425, 1458
HpyF10VI	GCNNNNNNNGC	4 cut(s)	491, 1376, 2072, 2081
HpyF3I	CTNAG	7 cut(s)	48, 756, 771, 784, 1091, 1603, 2193
HpySE526I	ACGT	8 cut(s)	78, 146, 357, 369, 552, 918, 1425, 1458
HspAI	GCGC	1 cut(s)	293
Kpn2I	TCCGGA	1 cut(s)	150
KpnI	GGTACC	1 cut(s)	694
Ksp22I	TGATCA	1 cut(s)	861
Kzo9I	GATC	7 cut(s)	243, 270, 559, 738, 861, 1899, 1931
LmnI	GCTCC	3 cut(s)	223, 398, 852
Lsp1109I	GCAGC	6 cut(s)	25, 282, 690, 1117, 1354, 2050
LweI	GCATC	3 cut(s)	1763, 1935, 2062
MaeI	CTAG	8 cut(s)	23, 288, 582, 695, 821, 1307, 1713, 2069
MaeII	ACGT	8 cut(s)	78, 146, 357, 369, 552, 918, 1425, 1458
MaeIII	GTNAC	3 cut(s)	81, 439, 1426
MalI	GATC	7 cut(s)	245, 272, 561, 740, 863, 1901, 1933
MbiI	CCGCTC	1 cut(s)	229
MboI	GATC	7 cut(s)	243, 270, 559, 738, 861, 1899, 1931
MflI	RGATCY	2 cut(s)	559, 738
MhlI	GDGCHC	7 cut(s)	8, 369, 496, 616, 772, 857, 1846
MlyI	GAGTC	5 cut(s)	96, 271, 1350, 1800, 1812
MmeI	TCCRAC	8 cut(s)	124, 138, 725, 877, 1026, 1756, 1969, 2210
Mph1103I	ATGCAT	1 cut(s)	1756
MroI	TCCGGA	1 cut(s)	150
MseI	TTAA	7 cut(s)	354, 432, 1235, 1560, 1971, 2114, 2230
MslI	CAYNNNNRTG	7 cut(s)	673, 911, 1154, 1322, 1526, 1595, 2217
MspA1I	CMGCKG	3 cut(s)	38, 1263, 1977
MspR9I	CCNGG	9 cut(s)	11, 344, 345, 403, 564, 702, 1434, 1479, 1731
Mva1269I	GAATGC	1 cut(s)	180
MvaI	CCWGG	3 cut(s)	11, 1479, 1731
MwoI	GCNNNNNNNGC	4 cut(s)	491, 1376, 2072, 2081
NciI	CCSGG	6 cut(s)	344, 345, 403, 564, 702, 1434
NcoI	CCATGG	1 cut(s)	1346
NdeI	CATATG	3 cut(s)	1114, 1513, 2108
NdeII	GATC	7 cut(s)	243, 270, 559, 738, 861, 1899, 1931
NlaIV	GGNNCC	8 cut(s)	7, 225, 400, 561, 692, 854, 1636, 1798
NmeAIII	GCCGAG	1 cut(s)	324
NmuCI	GTSAC	3 cut(s)	81, 439, 1426
NsiI	ATGCAT	1 cut(s)	1756
NspI	RCATGY	2 cut(s)	172, 1060
OliI	CACNNNNGTG	2 cut(s)	673, 1154
PaeI	GCATGC	1 cut(s)	172
PagI	TCATGA	1 cut(s)	1323
PaqCI	CACCTGC	1 cut(s)	244
PcsI	WCGNNNNNNNCGW	1 cut(s)	75
PctI	GAATGC	1 cut(s)	180
PfeI	GAWTC	6 cut(s)	316, 998, 1080, 1582, 1788, 1992
PflMI	CCANNNNNTGG	1 cut(s)	1266
PinAI	ACCGGT	1 cut(s)	1041
PkrI	GCNGC	8 cut(s)	37, 40, 228, 297, 680, 1132, 1369, 2065
Ple19I	CGATCG	1 cut(s)	273
PleI	GAGTC	5 cut(s)	96, 270, 1350, 1800, 1812
PmaCI	CACGTG	1 cut(s)	370
PmlI	CACGTG	1 cut(s)	370
PpsI	GAGTC	5 cut(s)	96, 270, 1350, 1800, 1812
Ppu21I	YACGTR	2 cut(s)	370, 553
PshAI	GACNNNNGTC	1 cut(s)	1713
PshBI	ATTAAT	1 cut(s)	1235
Psp124BI	GAGCTC	1 cut(s)	772
Psp6I	CCWGG	3 cut(s)	9, 1477, 1729
PspCI	CACGTG	1 cut(s)	370
PspFI	CCCAGC	1 cut(s)	1259
PspGI	CCWGG	3 cut(s)	9, 1477, 1729
PspN4I	GGNNCC	8 cut(s)	7, 225, 400, 561, 692, 854, 1636, 1798
PspPI	GGNCC	4 cut(s)	97, 416, 1778, 1850
PstI	CTGCAG	1 cut(s)	1372
PsuI	RGATCY	2 cut(s)	559, 738
PvuI	CGATCG	1 cut(s)	273
PvuII	CAGCTG	2 cut(s)	1263, 1977
RsaI	GTAC	8 cut(s)	524, 551, 692, 917, 956, 1457, 2045, 2149
RsaNI	GTAC	8 cut(s)	523, 550, 691, 916, 955, 1456, 2044, 2148
RseI	CAYNNNNRTG	7 cut(s)	673, 911, 1154, 1322, 1526, 1595, 2217
Rsr2I	CGGWCCG	1 cut(s)	416
RsrII	CGGWCCG	1 cut(s)	416
SacI	GAGCTC	1 cut(s)	772
SaqAI	TTAA	7 cut(s)	354, 432, 1235, 1560, 1971, 2114, 2230
SatI	GCNGC	8 cut(s)	36, 39, 227, 296, 679, 1131, 1368, 2064
Sau3AI	GATC	7 cut(s)	243, 270, 559, 738, 861, 1899, 1931
Sau96I	GGNCC	4 cut(s)	97, 416, 1778, 1850
SchI	GAGTC	5 cut(s)	96, 271, 1350, 1800, 1812
ScrFI	CCNGG	9 cut(s)	11, 344, 345, 403, 564, 702, 1434, 1479, 1731
SduI	GDGCHC	7 cut(s)	8, 369, 496, 616, 772, 857, 1846
SfaNI	GCATC	3 cut(s)	1763, 1935, 2062
SfcI	CTRYAG	4 cut(s)	162, 1368, 1623, 1671
SinI	GGWCC	4 cut(s)	97, 416, 1778, 1850
SmaI	CCCGGG	1 cut(s)	345
SmiMI	CAYNNNNRTG	7 cut(s)	673, 911, 1154, 1322, 1526, 1595, 2217
SpeI	ACTAGT	1 cut(s)	1712
SphI	GCATGC	1 cut(s)	172
SsiI	CCGC	7 cut(s)	36, 217, 227, 414, 428, 1586, 1938
SspI	AATATT	2 cut(s)	436, 1645
SspMI	CTAG	8 cut(s)	23, 288, 582, 695, 821, 1307, 1713, 2069
SstI	GAGCTC	1 cut(s)	772
StyD4I	CCNGG	9 cut(s)	9, 342, 343, 401, 562, 700, 1432, 1477, 1729
StyI	CCWWGG	3 cut(s)	1120, 1346, 1718
TaiI	ACGT	8 cut(s)	81, 149, 360, 372, 555, 921, 1428, 1461
TaqI	TCGA	5 cut(s)	54, 239, 380, 637, 644
TaqII	GACCGA	2 cut(s)	820, 1795
TatI	WGTACW	1 cut(s)	954
TauI	GCSGC	2 cut(s)	38, 229
TfiI	GAWTC	6 cut(s)	316, 998, 1080, 1582, 1788, 1992
Tru1I	TTAA	7 cut(s)	354, 432, 1235, 1560, 1971, 2114, 2230
Tru9I	TTAA	7 cut(s)	354, 432, 1235, 1560, 1971, 2114, 2230
TscAI	CASTG	5 cut(s)	675, 1616, 1680, 1926, 2171
TseFI	GTSAC	3 cut(s)	81, 439, 1426
TseI	GCWGC	6 cut(s)	38, 295, 678, 1130, 1367, 2063
Tsp45I	GTSAC	3 cut(s)	81, 439, 1426
TspGWI	ACGGA	4 cut(s)	236, 238, 1466, 1827
TspMI	CCCGGG	1 cut(s)	343
TspRI	CASTG	5 cut(s)	675, 1616, 1680, 1926, 2171
Van91I	CCANNNNNTGG	1 cut(s)	1266
VneI	GTGCAC	1 cut(s)	1842
VpaK11BI	GGWCC	4 cut(s)	97, 416, 1778, 1850
VspI	ATTAAT	1 cut(s)	1235
XapI	RAATTY	3 cut(s)	350, 653, 967
XceI	RCATGY	2 cut(s)	172, 1060
XcmI	CCANNNNNNNNNTGG	3 cut(s)	25, 514, 936
XmaI	CCCGGG	1 cut(s)	343
XmiI	GTMKAC	1 cut(s)	2177
XspI	CTAG	8 cut(s)	23, 288, 582, 695, 821, 1307, 1713, 2069
Zsp2I	ATGCAT	1 cut(s)	1756

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.