Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0003716

Physical Location & Seq

Genomic Coordinates Forward (+)

54107718 .. 54113010

Gene Structure 5293 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G036000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2226 bp

ATGGCTACCATACCTCTGGAAACCGAGCTTGTCGAGGCCAAACACGGTGGCAAAGAAGTTATCGACATTGACGATGAAGACGATGAGTTGTCACCGATCGAGGAGGTTCGTCTAACAGTGTCAAACGAAGACGACCCGACGCTCCCAGTATGGACATTCCGCATGTGGTCCATAGGCCTCTTCTCGTGCGCCCTCCTCTCCTTCCTCAACACCTTCTTCTCCTACCGCACCGAGCCCCTCGTCATCTCCGTGATCTCCGTCCAGGTGGCGAGTCTCCCCCTCGGAAAGTTCATGGCGAGGACCCTGCCCACGAGGAAGTTCCGAATTGGCTCGAAGGAGTTTTCACTTAATCCTGGTGAGTTCAACATCAAGGAGCACGTGTTGATATCGATTTTTGCAAATGCCGGAGCAGGGTTTGGGAGCGGTCCGGCTTATGCAGTTGGGATTGTGACTATCGTAAAGGCGTTTTATGTGAGGAAGATATCTTTCTTGGCGAGTTGGATACTTGTTATTACCACGCAGGTTTTGGGGTATGGATGGGCGGGTATTCTCCGGAAGTATGTGGTGGATCCGGCTACAATGTGGTGGCCTAGTAGTCTGGTTCAGGTCTCTTTGTTTAGGGCTCTACACGAGAAAGACAACAACCGCATGTCCAGAGGAAAATTCTTTCTGATTGCGCTGGTATGCAGCTTCTCTTGGTATGTTGTCCCAGACTACCTTTTCGCAACTATATCAACCATTTCATGGGTCTGCTGGCTTTTCCCCAAGTCAATAACAGCACATCAAATCGGGTCGGGCATGCGTGGACTTGGTATTGGGTCACTTACATTGGATTGGTCTGTCATAGCCTCGTACTTAGGCAGCCCACTGATCAGCCCATTTTTTGCCATTGTCAATATCACTGTTGGCTATATTCTCACCATGTATGTGGTATTACCGACTGCCTATTGGGGATTCAACTTATACAATGCCAAGAACTTCGCAATCTTCTCTAAAAACTTGTTTGATGACCATGGTGAAATATATAATGTCACGGCCATTGTCAACGACAAGTTCGAAATTGACATGCCTGCCTACAAAAAACAAGGACATATAAACCTCAGTGTGTTCTTTTCTCTGACCTACGGGATTGGCTTCGCTGGTGTTATATCGACCATCACACATGTGGCTCTATTCAATGGAAGGGAGATGTATGAGAAATACAAAGCTGCACATACTGGAAAGGTGGACATCCACACCAGATTGATGAGAAATTACAGAGACATACCTACCTGGTGGTTTCATATTCTGCTTTTGTTGTCGCTTGCACTCTCTCTGGCGTTATGCATTTTCATGAAAGATGAGGTACAACTGCCTTGGTGGGGACTCCTTTTTGCAGCTGCAATTGCATCGGTTTTCACTCTTCCGATTAGCGTTATAACGGCGACAACGAATCAGGCAAGACTAAACGTAATCACAGAGTATATAATGGGTTTGATATTACCTGGAGAACCAATAGCCAATGTATGCTTCAAAACCTATGGGTATATAAGCATGGCGCAGGCAATTTCCTTTCTGAGTGATTTCAAGTTAGGTCACTACATGAAGATCCCACCCATATCGATGTTCATAGTTCAGTGCATAGGAACTGTGATAGCCGGAACAGTCAATATTGGGGTGGCATGGTGGCTGCTAACTACTGTGGAAAACATATGTCAAGAAAGTTTACTCCCTCCTGATAGTCCTTGGACTTGTGTCAATGATGCTGTGTTTTTTGATGCCTCTGTAATTTGGGGTCTGGTCGGGCCAAAACGAATATTTGGCTCCCGTGGATACTACTCAGCACTTAACTGGTTCTTCCTTTTCGGTGCAATTGGACCTCTCATAGTATGGTTGTTGCATAAAGCTTTTCCAAGTCAAAAATGGATCGCGCTGATCAACCTTCCCGTGCTTTTGGGAGCAACGGCTGTAATGCCACCGGCTTCAACTGTGAACTTCAATTGCTGGATTATTGTTGGAGTTGTTTTCAATTACTATGTCTTCAGATACAGAAAGACATGGTGGCAAAGGTACAATTATGTTCTTTCAGCCGCCTTAGATGCTGGAGTAGCTTTCATGGCGGTGCTTGTATATTTATCAATGAATGGTAAGGGCATTTCTTGGTGGGGAACAGATGGGGAACACTGTCAGCTGGCTACCTGTCCAACAGCTGAAGGCTTGGATCTTGGTCATGCTTGTGTATGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006857 GO:0008150 GO:0015833 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

741

Amino Acids

82.91

Weight (kDa)

7.55

Isoelectric Point (pI)

25.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	50 - 706	3.3e-178	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003716)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09930
fragaria_vesca	FvH4_5g34010 FvH4_5g34011
malus_domestica	MD08G1206700.v1.1 MD15G1390200.v1.1 MD15G1390400.v1.1
prunus_persica	Prupe.1G539200_v2.0.a1 Prupe.1G539300_v2.0.a1
pyrus_communis	pycom15g34950 pycom15g34960
rosa_chinensis	RchiOBHm_Chr7g0233451 RchiOBHm_Chr7g0233471
rosa_laevigata	RLG00000001268 RLG00000001269
rosa_multiflora	Rmu_sc0000029.1_g000038 Rmu_sc0000029.1_g000051
rosa_roxburghii	Rroxscaffold_3G00227270 Rroxscaffold_3G00227290
rosa_rugosa	Rorug07G0280800 Rorug07G0280800
rosa_samantha	Rh7AG436600 Rh7AG436700 Rh7BG409700 Rh7BG409800 Rh7CG456500 Rh7CG456700 Rh7DG425800 Rh7DG425900
rosa_wichuraiana	Rw0G008530 Rw0G022500 Rw7G036000 Rw7G036010 Rw7G036030 Rw7G036040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1418
Acc36I	ACCTGC	1 cut(s)	511
AccB7I	CCANNNNNTGG	1 cut(s)	744
AccBSI	CCGCTC	1 cut(s)	423
AccII	CGCG	1 cut(s)	1910
AccIII	TCCGGA	1 cut(s)	552
AciI	CCGC	7 cut(s)	160, 226, 423, 542, 646, 2070, 2099
AclWI	GGATC	5 cut(s)	563, 576, 1582, 1913, 2208
AcoI	YGGCCR	1 cut(s)	1035
AcsI	RAATTY	1 cut(s)	662
AcuI	CTGAAG	2 cut(s)	2005, 2211
AcvI	CACGTG	1 cut(s)	379
AfaI	GTAC	3 cut(s)	854, 1347, 2051
AfiI	CCNNNNNNNGG	3 cut(s)	411, 744, 1361
AflIII	ACRYGT	2 cut(s)	378, 1162
AgsI	TTSAA	8 cut(s)	364, 958, 1177, 1513, 1567, 1965, 1978, 2008
AjnI	CCWGG	4 cut(s)	261, 352, 1271, 1483
AjuI	GAANNNNNNNTTGG	2 cut(s)	1493, 1525
AleI	CACNNNNGTG	1 cut(s)	1163
AluBI	AGCT	8 cut(s)	28, 690, 1208, 1379, 1886, 2090, 2170, 2189
AluI	AGCT	8 cut(s)	28, 690, 1208, 1379, 1886, 2090, 2170, 2189
Alw21I	GWGCWC	1 cut(s)	378
Alw26I	GTCTC	3 cut(s)	278, 613, 1254
AlwI	GGATC	5 cut(s)	563, 576, 1582, 1913, 2208
Aor13HI	TCCGGA	1 cut(s)	552
AoxI	GGCC	5 cut(s)	36, 175, 587, 1035, 1784
ApeKI	GCWGC	6 cut(s)	687, 861, 1208, 1376, 1379, 1669
ApoI	RAATTY	1 cut(s)	662
ArsI	GACNNNNNNTTYG	2 cut(s)	704, 736
AspLEI	GCGC	4 cut(s)	191, 679, 1540, 1912
AspS9I	GGNCC	5 cut(s)	168, 300, 425, 1784, 1856
AsuHPI	GGTGA	4 cut(s)	84, 368, 910, 1028
AsuII	TTCGAA	1 cut(s)	1056
AvaII	GGWCC	4 cut(s)	168, 300, 425, 1856
BamHI	GGATCC	1 cut(s)	568
BanII	GRGCYC	2 cut(s)	237, 625
BauI	CACGAG	3 cut(s)	184, 310, 629
BbrPI	CACGTG	1 cut(s)	379
BbsI	GAAGAC	3 cut(s)	84, 135, 2011
Bbv12I	GWGCWC	1 cut(s)	378
BbvI	GCAGC	6 cut(s)	699, 873, 1195, 1366, 1388, 1656
BccI	CCATC	3 cut(s)	531, 1163, 2147
BceAI	ACGGC	3 cut(s)	1050, 1437, 1959
BcgI	CGANNNNNNTGC	4 cut(s)	286, 320, 1371, 1405
BciT130I	CCWGG	4 cut(s)	263, 354, 1273, 1485
BciVI	GTATCC	2 cut(s)	495, 1805
BclI	TGATCA	2 cut(s)	870, 1914
BcoDI	GTCTC	3 cut(s)	278, 613, 1254
BfaI	CTAG	1 cut(s)	591
BfuAI	ACCTGC	1 cut(s)	511
BfuI	GTATCC	2 cut(s)	495, 1805
BisI	GCNGC	7 cut(s)	688, 862, 1209, 1377, 1380, 1670, 2070
BlsI	GCNGC	7 cut(s)	689, 863, 1210, 1378, 1381, 1671, 2071
Bme1390I	CCNGG	4 cut(s)	263, 354, 1273, 1485
Bme18I	GGWCC	4 cut(s)	168, 300, 425, 1856
BmgT120I	GGNCC	5 cut(s)	168, 300, 425, 1784, 1856
BmiI	GGNNCC	3 cut(s)	302, 570, 1804
BmrFI	CCNGG	4 cut(s)	263, 354, 1273, 1485
BmrI	ACTGGG	1 cut(s)	140
BmsI	GCATC	4 cut(s)	1397, 1732, 1747, 2068
BmuI	ACTGGG	1 cut(s)	140
BoxI	GACNNNNGTC	1 cut(s)	1733
BpiI	GAAGAC	3 cut(s)	84, 135, 2011
BpmI	CTGGAG	2 cut(s)	1506, 2103
Bpu14I	TTCGAA	1 cut(s)	1056
Bsa29I	ATCGAT	2 cut(s)	389, 1601
BsaAI	YACGTR	1 cut(s)	379
BsaI	GGTCTC	1 cut(s)	613
BsaJI	CCNNGG	5 cut(s)	280, 1012, 1355, 1724, 1807
BsaWI	WCCGGW	1 cut(s)	552
BsaXI	ACNNNNNCTCC	2 cut(s)	365, 395
Bsc4I	CCNNNNNNNGG	3 cut(s)	411, 744, 1361
Bse118I	RCCGGY	1 cut(s)	1957
Bse1I	ACTGG	3 cut(s)	146, 1222, 1835
BseAI	TCCGGA	1 cut(s)	552
BseBI	CCWGG	4 cut(s)	263, 354, 1273, 1485
BseCI	ATCGAT	2 cut(s)	389, 1601
BseDI	CCNNGG	5 cut(s)	280, 1012, 1355, 1724, 1807
BseGI	GGATG	2 cut(s)	542, 1230
BseLI	CCNNNNNNNGG	3 cut(s)	411, 744, 1361
BseMII	CTCAG	3 cut(s)	1114, 1547, 1833
BseNI	ACTGG	3 cut(s)	146, 1222, 1835
BseRI	GAGGAG	2 cut(s)	116, 185
BseXI	GCAGC	6 cut(s)	699, 873, 1195, 1366, 1388, 1656
BsgI	GTGCAG	1 cut(s)	1194
Bsh1236I	CGCG	1 cut(s)	1910
Bsh1285I	CGRYCG	1 cut(s)	99
BshFI	GGCC	5 cut(s)	38, 177, 589, 1037, 1786
BshVI	ATCGAT	2 cut(s)	389, 1601
BsiEI	CGRYCG	1 cut(s)	99
BsiHKAI	GWGCWC	1 cut(s)	378
BsiSI	CCGG	6 cut(s)	405, 428, 553, 572, 1638, 1958
BslFI	GGGAC	2 cut(s)	692, 1377
BslI	CCNNNNNNNGG	3 cut(s)	411, 744, 1361
BsmAI	GTCTC	3 cut(s)	278, 613, 1254
BsmFI	GGGAC	2 cut(s)	692, 1377
BsnI	GGCC	5 cut(s)	38, 177, 589, 1037, 1786
Bso31I	GGTCTC	1 cut(s)	613
Bsp119I	TTCGAA	1 cut(s)	1056
Bsp1286I	GDGCHC	3 cut(s)	237, 378, 625
Bsp13I	TCCGGA	1 cut(s)	552
Bsp143I	GATC	8 cut(s)	96, 252, 568, 870, 1587, 1905, 1914, 2200
Bsp19I	CCATGG	1 cut(s)	1012
BspACI	CCGC	7 cut(s)	160, 226, 423, 542, 646, 2070, 2099
BspANI	GGCC	5 cut(s)	38, 177, 589, 1037, 1786
BspCNI	CTCAG	3 cut(s)	1113, 1548, 1832
BspDI	ATCGAT	2 cut(s)	389, 1601
BspEI	TCCGGA	1 cut(s)	552
BspFNI	CGCG	1 cut(s)	1910
BspHI	TCATGA	1 cut(s)	1332
BspLI	GGNNCC	3 cut(s)	302, 570, 1804
BspMI	ACCTGC	1 cut(s)	511
BspPI	GGATC	5 cut(s)	563, 576, 1582, 1913, 2208
BspT104I	TTCGAA	1 cut(s)	1056
BspTNI	GGTCTC	1 cut(s)	613
BsrBI	CCGCTC	1 cut(s)	423
BsrFI	RCCGGY	1 cut(s)	1957
BsrI	ACTGG	3 cut(s)	146, 1222, 1835
BssAI	RCCGGY	1 cut(s)	1957
BssECI	CCNNGG	5 cut(s)	280, 1012, 1355, 1724, 1807
BssMI	GATC	8 cut(s)	96, 252, 568, 870, 1587, 1905, 1914, 2200
BssSI	CACGAG	3 cut(s)	184, 310, 629
BssT1I	CCWWGG	3 cut(s)	1012, 1355, 1724
Bst2BI	CACGAG	3 cut(s)	184, 310, 629
Bst2UI	CCWGG	4 cut(s)	263, 354, 1273, 1485
Bst4CI	ACNGT	8 cut(s)	47, 118, 904, 1630, 1645, 1681, 1969, 2165
Bst6I	CTCTTC	2 cut(s)	185, 1407
BstBAI	YACGTR	1 cut(s)	379
BstBI	TTCGAA	1 cut(s)	1056
BstC8I	GCNNGC	6 cut(s)	755, 800, 1071, 1305, 1542, 2172
BstDEI	CTNAG	5 cut(s)	856, 1100, 1556, 1819, 2074
BstDSI	CCRYGG	2 cut(s)	1012, 1807
BstF5I	GGATG	2 cut(s)	542, 1230
BstFNI	CGCG	1 cut(s)	1910
BstHHI	GCGC	4 cut(s)	191, 679, 1540, 1912
BstKTI	GATC	8 cut(s)	99, 255, 571, 873, 1590, 1908, 1917, 2203
BstMAI	GTCTC	3 cut(s)	278, 613, 1254
BstMBI	GATC	8 cut(s)	96, 252, 568, 870, 1587, 1905, 1914, 2200
BstMCI	CGRYCG	1 cut(s)	99
BstMWI	GCNNNNNNNGC	4 cut(s)	1385, 2078, 2087, 2096
BstNI	CCWGG	4 cut(s)	263, 354, 1273, 1485
BstNSI	RCATGY	5 cut(s)	166, 652, 802, 1069, 1166
BstPAI	GACNNNNGTC	1 cut(s)	1733
BstSCI	CCNGG	4 cut(s)	261, 352, 1271, 1483
BstUI	CGCG	1 cut(s)	1910
BstV1I	GCAGC	6 cut(s)	699, 873, 1195, 1366, 1388, 1656
BstV2I	GAAGAC	3 cut(s)	84, 135, 2011
BstX2I	RGATCY	3 cut(s)	568, 1587, 2200
BstXI	CCANNNNNNTGG	2 cut(s)	16, 928
BstYI	RGATCY	3 cut(s)	568, 1587, 2200
Bsu15I	ATCGAT	2 cut(s)	389, 1601
BsuI	GTATCC	2 cut(s)	495, 1805
BsuRI	GGCC	5 cut(s)	38, 177, 589, 1037, 1786
BsuTUI	ATCGAT	2 cut(s)	389, 1601
BtgI	CCRYGG	2 cut(s)	1012, 1807
BtsCI	GGATG	2 cut(s)	542, 1230
BtsIMutI	CAGTG	6 cut(s)	123, 866, 900, 1108, 1622, 2161
BveI	ACCTGC	1 cut(s)	511
Cac8I	GCNNGC	6 cut(s)	755, 800, 1071, 1305, 1542, 2172
CciI	TCATGA	1 cut(s)	1332
CfoI	GCGC	4 cut(s)	191, 679, 1540, 1912
Cfr10I	RCCGGY	1 cut(s)	1957
Cfr13I	GGNCC	5 cut(s)	168, 300, 425, 1784, 1856
ClaI	ATCGAT	2 cut(s)	389, 1601
CpoI	CGGWCCG	1 cut(s)	425
CseI	GACGC	1 cut(s)	148
CsiI	ACCWGGT	1 cut(s)	1271
Csp6I	GTAC	3 cut(s)	853, 1346, 2050
CspCI	CAANNNNNGTGG	2 cut(s)	28, 63
CspI	CGGWCCG	1 cut(s)	425
CviQI	GTAC	3 cut(s)	853, 1346, 2050
DdeI	CTNAG	5 cut(s)	856, 1100, 1556, 1819, 2074
DpnI	GATC	8 cut(s)	98, 254, 570, 872, 1589, 1907, 1916, 2202
DpnII	GATC	8 cut(s)	96, 252, 568, 870, 1587, 1905, 1914, 2200
EaeI	YGGCCR	1 cut(s)	1035
Eam1104I	CTCTTC	2 cut(s)	185, 1407
EarI	CTCTTC	2 cut(s)	185, 1407
Eco130I	CCWWGG	3 cut(s)	1012, 1355, 1724
Eco147I	AGGCCT	1 cut(s)	177
Eco24I	GRGCYC	2 cut(s)	237, 625
Eco31I	GGTCTC	1 cut(s)	613
Eco32I	GATATC	2 cut(s)	387, 483
Eco47I	GGWCC	4 cut(s)	168, 300, 425, 1856
Eco57I	CTGAAG	2 cut(s)	2005, 2211
Eco72I	CACGTG	1 cut(s)	379
EcoO109I	RGGNCCY	1 cut(s)	300
EcoRII	CCWGG	4 cut(s)	261, 352, 1271, 1483
EcoRV	GATATC	2 cut(s)	387, 483
EcoT14I	CCWWGG	3 cut(s)	1012, 1355, 1724
EcoT22I	ATGCAT	1 cut(s)	1328
EcoT38I	GRGCYC	2 cut(s)	237, 625
ErhI	CCWWGG	3 cut(s)	1012, 1355, 1724
FaqI	GGGAC	2 cut(s)	692, 1377
FauI	CCCGC	1 cut(s)	535
FauNDI	CATATG	1 cut(s)	1691
FbaI	TGATCA	2 cut(s)	870, 1914
Fnu4HI	GCNGC	7 cut(s)	688, 862, 1209, 1377, 1380, 1670, 2070
FokI	GGATG	2 cut(s)	549, 1217
FriOI	GRGCYC	2 cut(s)	237, 625
Fsp4HI	GCNGC	7 cut(s)	688, 862, 1209, 1377, 1380, 1670, 2070
FspBI	CTAG	1 cut(s)	591
GlaI	GCGC	4 cut(s)	190, 678, 1539, 1911
GluI	GCNGC	7 cut(s)	688, 862, 1209, 1377, 1380, 1670, 2070
GsuI	CTGGAG	2 cut(s)	1506, 2103
HaeIII	GGCC	5 cut(s)	38, 177, 589, 1037, 1786
HapII	CCGG	6 cut(s)	405, 428, 553, 572, 1638, 1958
HgaI	GACGC	1 cut(s)	148
HhaI	GCGC	4 cut(s)	191, 679, 1540, 1912
Hin6I	GCGC	4 cut(s)	189, 677, 1538, 1910
HinP1I	GCGC	4 cut(s)	189, 677, 1538, 1910
HincII	GTYRAC	1 cut(s)	1045
HindII	GTYRAC	1 cut(s)	1045
HindIII	AAGCTT	1 cut(s)	1884
HinfI	GANTC	4 cut(s)	271, 954, 1365, 1432
HpaII	CCGG	6 cut(s)	405, 428, 553, 572, 1638, 1958
HphI	GGTGA	4 cut(s)	84, 368, 910, 1028
Hpy166II	GTNNAC	5 cut(s)	806, 1045, 1228, 1706, 1972
Hpy188I	TCNGA	7 cut(s)	284, 323, 672, 1119, 1407, 1557, 2024
Hpy188III	TCNNGA	6 cut(s)	17, 553, 654, 1333, 1697, 1715
Hpy8I	GTNNAC	5 cut(s)	806, 1045, 1228, 1706, 1972
Hpy99I	CGWCG	1 cut(s)	142
HpyAV	CCTTC	6 cut(s)	211, 223, 328, 1176, 1931, 2186
HpyCH4III	ACNGT	8 cut(s)	47, 118, 904, 1630, 1645, 1681, 1969, 2165
HpyCH4IV	ACGT	2 cut(s)	378, 1449
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1385, 2078, 2087, 2096
HpyF3I	CTNAG	5 cut(s)	856, 1100, 1556, 1819, 2074
HpySE526I	ACGT	2 cut(s)	378, 1449
HspAI	GCGC	4 cut(s)	189, 677, 1538, 1910
Kpn2I	TCCGGA	1 cut(s)	552
Ksp22I	TGATCA	2 cut(s)	870, 1914
Kzo9I	GATC	8 cut(s)	96, 252, 568, 870, 1587, 1905, 1914, 2200
LmnI	GCTCC	6 cut(s)	147, 373, 407, 420, 1808, 1937
Lsp1109I	GCAGC	6 cut(s)	699, 873, 1195, 1366, 1388, 1656
LweI	GCATC	4 cut(s)	1397, 1732, 1747, 2068
MabI	ACCWGGT	1 cut(s)	1271
MaeI	CTAG	1 cut(s)	591
MaeII	ACGT	2 cut(s)	378, 1449
MaeIII	GTNAC	5 cut(s)	90, 448, 819, 1030, 1574
MalI	GATC	8 cut(s)	98, 254, 570, 872, 1589, 1907, 1916, 2202
MbiI	CCGCTC	1 cut(s)	423
MboI	GATC	8 cut(s)	96, 252, 568, 870, 1587, 1905, 1914, 2200
MfeI	CAATTG	3 cut(s)	1383, 1851, 1978
MflI	RGATCY	3 cut(s)	568, 1587, 2200
MhlI	GDGCHC	3 cut(s)	237, 378, 625
MlyI	GAGTC	2 cut(s)	280, 1359
MmeI	TCCRAC	3 cut(s)	479, 1975, 2207
Mph1103I	ATGCAT	1 cut(s)	1328
MroI	TCCGGA	1 cut(s)	552
MseI	TTAA	2 cut(s)	348, 1827
MslI	CAYNNNNRTG	7 cut(s)	248, 926, 1163, 1331, 1601, 2099, 2214
MspA1I	CMGCKG	3 cut(s)	1379, 2170, 2189
MspI	CCGG	6 cut(s)	405, 428, 553, 572, 1638, 1958
MspR9I	CCNGG	4 cut(s)	263, 354, 1273, 1485
MunI	CAATTG	3 cut(s)	1383, 1851, 1978
MvaI	CCWGG	4 cut(s)	263, 354, 1273, 1485
MvnI	CGCG	1 cut(s)	1910
MwoI	GCNNNNNNNGC	4 cut(s)	1385, 2078, 2087, 2096
NcoI	CCATGG	1 cut(s)	1012
NdeI	CATATG	1 cut(s)	1691
NdeII	GATC	8 cut(s)	96, 252, 568, 870, 1587, 1905, 1914, 2200
NlaIV	GGNNCC	3 cut(s)	302, 570, 1804
NmuCI	GTSAC	5 cut(s)	90, 448, 819, 1030, 1574
NsiI	ATGCAT	1 cut(s)	1328
NspI	RCATGY	5 cut(s)	166, 652, 802, 1069, 1166
NspV	TTCGAA	1 cut(s)	1056
OliI	CACNNNNGTG	1 cut(s)	1163
PaeI	GCATGC	1 cut(s)	802
PagI	TCATGA	1 cut(s)	1332
PceI	AGGCCT	1 cut(s)	177
PciI	ACATGT	1 cut(s)	1162
PcsI	WCGNNNNNNNCGW	5 cut(s)	69, 78, 246, 1053, 1427
PfeI	GAWTC	2 cut(s)	954, 1432
PflMI	CCANNNNNTGG	1 cut(s)	744
PkrI	GCNGC	7 cut(s)	689, 863, 1210, 1378, 1381, 1671, 2071
Ple19I	CGATCG	1 cut(s)	99
PleI	GAGTC	2 cut(s)	279, 1359
PmaCI	CACGTG	1 cut(s)	379
PmlI	CACGTG	1 cut(s)	379
PpsI	GAGTC	2 cut(s)	279, 1359
Ppu21I	YACGTR	1 cut(s)	379
PpuMI	RGGWCCY	1 cut(s)	300
PscI	ACATGT	1 cut(s)	1162
PshAI	GACNNNNGTC	1 cut(s)	1733
PsiI	TTATAA	1 cut(s)	1418
Psp5II	RGGWCCY	1 cut(s)	300
Psp6I	CCWGG	4 cut(s)	261, 352, 1271, 1483
PspCI	CACGTG	1 cut(s)	379
PspGI	CCWGG	4 cut(s)	261, 352, 1271, 1483
PspN4I	GGNNCC	3 cut(s)	302, 570, 1804
PspPI	GGNCC	5 cut(s)	168, 300, 425, 1784, 1856
PspPPI	RGGWCCY	1 cut(s)	300
PsuI	RGATCY	3 cut(s)	568, 1587, 2200
PvuI	CGATCG	1 cut(s)	99
PvuII	CAGCTG	3 cut(s)	1379, 2170, 2189
RsaI	GTAC	3 cut(s)	854, 1347, 2051
RsaNI	GTAC	3 cut(s)	853, 1346, 2050
RseI	CAYNNNNRTG	7 cut(s)	248, 926, 1163, 1331, 1601, 2099, 2214
Rsr2I	CGGWCCG	1 cut(s)	425
RsrII	CGGWCCG	1 cut(s)	425
SaqAI	TTAA	2 cut(s)	348, 1827
SatI	GCNGC	7 cut(s)	688, 862, 1209, 1377, 1380, 1670, 2070
Sau3AI	GATC	8 cut(s)	96, 252, 568, 870, 1587, 1905, 1914, 2200
Sau96I	GGNCC	5 cut(s)	168, 300, 425, 1784, 1856
SchI	GAGTC	2 cut(s)	280, 1359
ScrFI	CCNGG	4 cut(s)	263, 354, 1273, 1485
SduI	GDGCHC	3 cut(s)	237, 378, 625
SexAI	ACCWGGT	1 cut(s)	1271
SfaNI	GCATC	4 cut(s)	1397, 1732, 1747, 2068
SfuI	TTCGAA	1 cut(s)	1056
SinI	GGWCC	4 cut(s)	168, 300, 425, 1856
SmiMI	CAYNNNNRTG	7 cut(s)	248, 926, 1163, 1331, 1601, 2099, 2214
SphI	GCATGC	1 cut(s)	802
SseBI	AGGCCT	1 cut(s)	177
SsiI	CCGC	7 cut(s)	160, 226, 423, 542, 646, 2070, 2099
SspI	AATATT	2 cut(s)	1651, 1797
SspMI	CTAG	1 cut(s)	591
StuI	AGGCCT	1 cut(s)	177
StyD4I	CCNGG	4 cut(s)	261, 352, 1271, 1483
StyI	CCWWGG	3 cut(s)	1012, 1355, 1724
TaaI	ACNGT	8 cut(s)	47, 118, 904, 1630, 1645, 1681, 1969, 2165
TaiI	ACGT	2 cut(s)	381, 1452
TaqI	TCGA	8 cut(s)	33, 63, 99, 332, 389, 1056, 1151, 1601
TauI	GCSGC	1 cut(s)	2072
TfiI	GAWTC	2 cut(s)	954, 1432
Tru1I	TTAA	2 cut(s)	348, 1827
Tru9I	TTAA	2 cut(s)	348, 1827
TscAI	CASTG	6 cut(s)	123, 873, 907, 1108, 1622, 2168
TseFI	GTSAC	5 cut(s)	90, 448, 819, 1030, 1574
TseI	GCWGC	6 cut(s)	687, 861, 1208, 1376, 1379, 1669
Tsp45I	GTSAC	5 cut(s)	90, 448, 819, 1030, 1574
TspGWI	ACGGA	2 cut(s)	238, 247
TspRI	CASTG	6 cut(s)	123, 873, 907, 1108, 1622, 2168
Van91I	CCANNNNNTGG	1 cut(s)	744
VpaK11BI	GGWCC	4 cut(s)	168, 300, 425, 1856
XapI	RAATTY	1 cut(s)	662
XceI	RCATGY	5 cut(s)	166, 652, 802, 1069, 1166
XcmI	CCANNNNNNNNNTGG	3 cut(s)	523, 1162, 1899
XspI	CTAG	1 cut(s)	591
Zsp2I	ATGCAT	1 cut(s)	1328

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.