Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0003716

Physical Location & Seq

Genomic Coordinates Forward (+)

46006276 .. 46008167

Gene Structure 1892 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG409800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1332 bp

ATGGACATAGAGTCCACCAAACTCGACGTGGACGACGACGTGTCACCCATCGAAGAGGTCCGCTTAACGGTCTCGAACGAAGACGACCCGACCCTTCCAGTATGGACCTTCCGGATGTGGACCCTAGGGATCCTCTCCTGCGTCCTCCTCTCCTTCCTCAACACCTTCTTCTCCTACCGCACCGAGCCCCTGATCATCACCATGATCACCGTACAGGTGGCGACACTGCCCATCGGACGGTTCATGGCTAGGGTACTGCCCACTAGGAAGTTTTCGATCGGGTCGATGGAGTTCTCGCTCAACCCGGGTCCGTTTAACAAGAAGGAGCACGTGCTGATATCCATATTTGCCAACGCCGGATCCGGGTTCGGAGGCGGAACGGCTTATGCTGTTGGCATTGTCGATATAATCAAGGCATTTTATCACAGGAAGATATCGTTCTTGGCCAGTTGGCTTCTGGTCAATACCACACAGGCATTGGGGTATGGGTGGGCTGGAATTCTCCGAAAGTACGTGGTGGATCCGGGAGAGATGTGGTGGCCCTCTAGTGTAGTTCAGGTCAACTTGTTCGATGCCCTACACGAGAAAGACAACAAGCGAATGTCCAGAGCGAAATTCTTCTTAATTGCATTCATATGCAGCTTCTCTTGGTATGTTGTCCCAGGCTACCTTTTCCCAACTATATCAACCATTTCATGGATTTGTTGGATATACCCCAAGTCAGTAACAGTGCAACAAATTGCATCCGGCATGCGTGGACTTGGTGTTGTTGGCTATGTTGCTTTCATGTTTGTGATACTGCCAATTGCCTACTGGGGAGTCAATTTATACAATGCCAAGAACTTCCCAATCTTCTCTTCCCATTTGTTTGATGCCCAAGGTCAAGTATATAACACTTCAGCAATTGTGAATGACAAATTTCAAATTGACATGCCGGCGTATGAAAAACAAGGACGTGTAAACTTAAGTGTGTTTTTTGCTCTGACATATGGTATTGGCTTTGCGGCCATTATATCAACCCTCACTCACGTGGCCCTCTTCAATGGAAGGGAGATATATGAACAATTTCGAGCATCGAAGAAGGATGGAAAGGTAGACATACACACCAAATTGATGAGGAAATACAAGGACATACCTAACTGGTGGTTTCATCTTACTCTTTTGGTGTCATTTGGAATCGCTCTGGCACTATGCATTTTCATGAAAGATGAGATTCCGATGCCGTGGTGGGCACTCATTTTCGCTGCAGTCCTTGCATTAATTTTCACTCTTCCGGTCAGCATTATTACCGCCACAACAAATCAGGCAAGCTTCAATTGTTTTGCTTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006857 GO:0008150 GO:0015833 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

443

Amino Acids

50.0

Weight (kDa)

8.78

Isoelectric Point (pI)

24.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	34 - 254	3.6e-63	OPT oligopeptide transporter protein
OPT	PF03169	257 - 435	1.4e-37	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003716)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09930
fragaria_vesca	FvH4_5g34010 FvH4_5g34011
malus_domestica	MD08G1206700.v1.1 MD15G1390200.v1.1 MD15G1390400.v1.1
prunus_persica	Prupe.1G539200_v2.0.a1 Prupe.1G539300_v2.0.a1
pyrus_communis	pycom15g34950 pycom15g34960
rosa_chinensis	RchiOBHm_Chr7g0233451 RchiOBHm_Chr7g0233471
rosa_laevigata	RLG00000001268 RLG00000001269
rosa_multiflora	Rmu_sc0000029.1_g000038 Rmu_sc0000029.1_g000051
rosa_roxburghii	Rroxscaffold_3G00227270 Rroxscaffold_3G00227290
rosa_rugosa	Rorug07G0280800 Rorug07G0280800
rosa_samantha	Rh7AG436600 Rh7AG436700 Rh7BG409700 Rh7BG409800 Rh7CG456500 Rh7CG456700 Rh7DG425800 Rh7DG425900
rosa_wichuraiana	Rw0G008530 Rw0G022500 Rw7G036000 Rw7G036010 Rw7G036030 Rw7G036040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	696
AccI	GTMKAC	1 cut(s)	1095
AccIII	TCCGGA	1 cut(s)	111
AciI	CCGC	5 cut(s)	61, 178, 375, 1004, 1290
AclWI	GGATC	6 cut(s)	124, 137, 354, 367, 515, 528
AcoI	YGGCCR	2 cut(s)	444, 1005
AcsI	RAATTY	3 cut(s)	498, 614, 917
AcuI	CTGAAG	1 cut(s)	882
AcvI	CACGTG	2 cut(s)	331, 1030
AfaI	GTAC	3 cut(s)	213, 255, 512
AfiI	CCNNNNNNNGG	4 cut(s)	67, 237, 363, 696
AflII	CTTAAG	1 cut(s)	964
AflIII	ACRYGT	2 cut(s)	39, 955
AgsI	TTSAA	3 cut(s)	923, 1042, 1315
AhdI	GACNNNNNGTC	2 cut(s)	10, 40
AjiI	CACGTC	3 cut(s)	28, 40, 956
AjnI	CCWGG	1 cut(s)	661
AjuI	GAANNNNNNNTTGG	2 cut(s)	841, 873
AleI	CACNNNNGTG	1 cut(s)	1028
AluBI	AGCT	2 cut(s)	642, 1311
AluI	AGCT	2 cut(s)	642, 1311
Alw21I	GWGCWC	1 cut(s)	330
Alw26I	GTCTC	1 cut(s)	76
AlwI	GGATC	6 cut(s)	124, 137, 354, 367, 515, 528
Ama87I	CYCGRG	1 cut(s)	304
Aor13HI	TCCGGA	1 cut(s)	111
AoxI	GGCC	4 cut(s)	444, 539, 1005, 1032
ApeKI	GCWGC	2 cut(s)	639, 1244
ApoI	RAATTY	3 cut(s)	498, 614, 917
AseI	ATTAAT	1 cut(s)	1259
Asp700I	GAANNNNTTC	2 cut(s)	617, 1065
AspA2I	CCTAGG	1 cut(s)	124
AspS9I	GGNCC	6 cut(s)	58, 105, 120, 308, 540, 1033
AsuC2I	CCSGG	4 cut(s)	305, 306, 364, 525
AsuHPI	GGTGA	3 cut(s)	36, 190, 199
AvaI	CYCGRG	1 cut(s)	304
AvaII	GGWCC	4 cut(s)	58, 105, 120, 308
AvrII	CCTAGG	1 cut(s)	124
BaeGI	GKGCMC	1 cut(s)	1234
BalI	TGGCCA	1 cut(s)	446
BamHI	GGATCC	3 cut(s)	129, 359, 520
BanII	GRGCYC	1 cut(s)	189
BauI	CACGAG	1 cut(s)	581
BbrPI	CACGTG	2 cut(s)	331, 1030
BbsI	GAAGAC	1 cut(s)	87
Bbv12I	GWGCWC	1 cut(s)	330
BbvI	GCAGC	2 cut(s)	651, 1231
BccI	CCATC	4 cut(s)	56, 239, 280, 1079
BceAI	ACGGC	2 cut(s)	396, 1207
BciT130I	CCWGG	1 cut(s)	663
BclI	TGATCA	2 cut(s)	192, 204
BcnI	CCSGG	4 cut(s)	305, 306, 364, 525
BcoDI	GTCTC	1 cut(s)	76
BfaI	CTAG	4 cut(s)	125, 249, 264, 546
BfmI	CTRYAG	1 cut(s)	1245
BfrI	CTTAAG	1 cut(s)	964
BisI	GCNGC	3 cut(s)	640, 1005, 1245
BlnI	CCTAGG	1 cut(s)	124
BlsI	GCNGC	3 cut(s)	641, 1006, 1246
Bme1390I	CCNGG	5 cut(s)	305, 306, 364, 525, 663
Bme18I	GGWCC	4 cut(s)	58, 105, 120, 308
BmeRI	GACNNNNNGTC	2 cut(s)	10, 40
BmeT110I	CYCGRG	1 cut(s)	304
BmgBI	CACGTC	3 cut(s)	28, 40, 956
BmgT120I	GGNCC	6 cut(s)	58, 105, 120, 308, 540, 1033
BmiI	GGNNCC	5 cut(s)	122, 131, 309, 361, 522
BmrFI	CCNGG	5 cut(s)	305, 306, 364, 525, 663
BmrI	ACTGGG	1 cut(s)	823
BmsI	GCATC	5 cut(s)	562, 752, 862, 1082, 1209
BmuI	ACTGGG	1 cut(s)	823
BpiI	GAAGAC	1 cut(s)	87
BpuMI	CCSGG	4 cut(s)	305, 306, 364, 525
BsaAI	YACGTR	3 cut(s)	331, 514, 1030
BsaI	GGTCTC	1 cut(s)	76
BsaJI	CCNNGG	5 cut(s)	124, 304, 661, 877, 1223
BsaWI	WCCGGW	2 cut(s)	111, 1273
Bsc4I	CCNNNNNNNGG	4 cut(s)	67, 237, 363, 696
Bse118I	RCCGGY	1 cut(s)	934
Bse1I	ACTGG	4 cut(s)	98, 447, 818, 1145
BseAI	TCCGGA	1 cut(s)	111
BseBI	CCWGG	1 cut(s)	663
BseDI	CCNNGG	5 cut(s)	124, 304, 661, 877, 1223
BseGI	GGATG	3 cut(s)	120, 743, 1090
BseLI	CCNNNNNNNGG	4 cut(s)	67, 237, 363, 696
BseNI	ACTGG	4 cut(s)	98, 447, 818, 1145
BseRI	GAGGAG	1 cut(s)	137
BseSI	GKGCMC	1 cut(s)	1234
BseXI	GCAGC	2 cut(s)	651, 1231
Bsh1285I	CGRYCG	1 cut(s)	279
BshFI	GGCC	4 cut(s)	446, 541, 1007, 1034
BsiEI	CGRYCG	1 cut(s)	279
BsiHKAI	GWGCWC	1 cut(s)	330
BsiHKCI	CYCGRG	1 cut(s)	304
BsiSI	CCGG	8 cut(s)	112, 305, 357, 363, 524, 747, 935, 1274
BslFI	GGGAC	1 cut(s)	644
BslI	CCNNNNNNNGG	4 cut(s)	67, 237, 363, 696
BsmAI	GTCTC	1 cut(s)	76
BsmFI	GGGAC	1 cut(s)	644
BsmI	GAATGC	1 cut(s)	629
BsnI	GGCC	4 cut(s)	446, 541, 1007, 1034
Bso31I	GGTCTC	1 cut(s)	76
BsoBI	CYCGRG	1 cut(s)	304
Bsp1286I	GDGCHC	3 cut(s)	189, 330, 1234
Bsp13I	TCCGGA	1 cut(s)	111
Bsp143I	GATC	6 cut(s)	129, 192, 204, 276, 359, 520
BspACI	CCGC	5 cut(s)	61, 178, 375, 1004, 1290
BspANI	GGCC	4 cut(s)	446, 541, 1007, 1034
BspEI	TCCGGA	1 cut(s)	111
BspHI	TCATGA	2 cut(s)	1200, 1328
BspLI	GGNNCC	5 cut(s)	122, 131, 309, 361, 522
BspMAI	CTGCAG	1 cut(s)	1249
BspPI	GGATC	6 cut(s)	124, 137, 354, 367, 515, 528
BspTI	CTTAAG	1 cut(s)	964
BspTNI	GGTCTC	1 cut(s)	76
BsrFI	RCCGGY	1 cut(s)	934
BsrI	ACTGG	4 cut(s)	98, 447, 818, 1145
BssAI	RCCGGY	1 cut(s)	934
BssECI	CCNNGG	5 cut(s)	124, 304, 661, 877, 1223
BssMI	GATC	6 cut(s)	129, 192, 204, 276, 359, 520
BssSI	CACGAG	1 cut(s)	581
BssT1I	CCWWGG	2 cut(s)	124, 877
Bst2BI	CACGAG	1 cut(s)	581
Bst2UI	CCWGG	1 cut(s)	663
Bst4CI	ACNGT	4 cut(s)	70, 211, 240, 730
Bst6I	CTCTTC	4 cut(s)	48, 862, 1043, 1275
BstAFI	CTTAAG	1 cut(s)	964
BstAPI	GCANNNNNTGC	1 cut(s)	1253
BstBAI	YACGTR	3 cut(s)	331, 514, 1030
BstC8I	GCNNGC	3 cut(s)	752, 936, 1309
BstDSI	CCRYGG	1 cut(s)	1223
BstF5I	GGATG	3 cut(s)	120, 743, 1090
BstKTI	GATC	6 cut(s)	132, 195, 207, 279, 362, 523
BstMAI	GTCTC	1 cut(s)	76
BstMBI	GATC	6 cut(s)	129, 192, 204, 276, 359, 520
BstMCI	CGRYCG	1 cut(s)	279
BstMWI	GCNNNNNNNGC	1 cut(s)	1253
BstNI	CCWGG	1 cut(s)	663
BstNSI	RCATGY	2 cut(s)	754, 934
BstSCI	CCNGG	5 cut(s)	303, 304, 362, 523, 661
BstSFI	CTRYAG	1 cut(s)	1245
BstSLI	GKGCMC	1 cut(s)	1234
BstV1I	GCAGC	2 cut(s)	651, 1231
BstV2I	GAAGAC	1 cut(s)	87
BstX2I	RGATCY	3 cut(s)	129, 359, 520
BstYI	RGATCY	3 cut(s)	129, 359, 520
BsuRI	GGCC	4 cut(s)	446, 541, 1007, 1034
BtgI	CCRYGG	1 cut(s)	1223
BtrI	CACGTC	3 cut(s)	28, 40, 956
BtsCI	GGATG	3 cut(s)	120, 743, 1090
BtsI	GCAGTG	1 cut(s)	224
BtsIMutI	CAGTG	2 cut(s)	224, 735
Cac8I	GCNNGC	3 cut(s)	752, 936, 1309
CciI	TCATGA	2 cut(s)	1200, 1328
Cfr10I	RCCGGY	1 cut(s)	934
Cfr13I	GGNCC	6 cut(s)	58, 105, 120, 308, 540, 1033
Cfr9I	CCCGGG	1 cut(s)	304
CseI	GACGC	1 cut(s)	130
Csp6I	GTAC	3 cut(s)	212, 254, 511
CviAII	CATG	8 cut(s)	202, 244, 696, 751, 787, 931, 1201, 1329
CviQI	GTAC	3 cut(s)	212, 254, 511
DpnI	GATC	6 cut(s)	131, 194, 206, 278, 361, 522
DpnII	GATC	6 cut(s)	129, 192, 204, 276, 359, 520
DriI	GACNNNNNGTC	2 cut(s)	10, 40
EaeI	YGGCCR	2 cut(s)	444, 1005
Eam1104I	CTCTTC	4 cut(s)	48, 862, 1043, 1275
Eam1105I	GACNNNNNGTC	2 cut(s)	10, 40
EarI	CTCTTC	4 cut(s)	48, 862, 1043, 1275
EciI	GGCGGA	1 cut(s)	390
Eco130I	CCWWGG	2 cut(s)	124, 877
Eco24I	GRGCYC	1 cut(s)	189
Eco31I	GGTCTC	1 cut(s)	76
Eco32I	GATATC	2 cut(s)	339, 435
Eco47I	GGWCC	4 cut(s)	58, 105, 120, 308
Eco57I	CTGAAG	1 cut(s)	882
Eco72I	CACGTG	2 cut(s)	331, 1030
Eco88I	CYCGRG	1 cut(s)	304
EcoRI	GAATTC	1 cut(s)	498
EcoRII	CCWGG	1 cut(s)	661
EcoRV	GATATC	2 cut(s)	339, 435
EcoT14I	CCWWGG	2 cut(s)	124, 877
EcoT22I	ATGCAT	1 cut(s)	1196
EcoT38I	GRGCYC	1 cut(s)	189
ErhI	CCWWGG	2 cut(s)	124, 877
FaeI	CATG	8 cut(s)	205, 247, 699, 754, 790, 934, 1204, 1332
FaqI	GGGAC	1 cut(s)	644
FatI	CATG	8 cut(s)	201, 243, 695, 750, 786, 930, 1200, 1328
FauNDI	CATATG	2 cut(s)	635, 988
FbaI	TGATCA	2 cut(s)	192, 204
FblI	GTMKAC	1 cut(s)	1095
Fnu4HI	GCNGC	3 cut(s)	640, 1005, 1245
FokI	GGATG	3 cut(s)	127, 730, 1097
FriOI	GRGCYC	1 cut(s)	189
Fsp4HI	GCNGC	3 cut(s)	640, 1005, 1245
FspBI	CTAG	4 cut(s)	125, 249, 264, 546
GluI	GCNGC	3 cut(s)	640, 1005, 1245
HaeIII	GGCC	4 cut(s)	446, 541, 1007, 1034
HapII	CCGG	8 cut(s)	112, 305, 357, 363, 524, 747, 935, 1274
HgaI	GACGC	1 cut(s)	130
Hin1II	CATG	8 cut(s)	205, 247, 699, 754, 790, 934, 1204, 1332
HincII	GTYRAC	1 cut(s)	562
HindII	GTYRAC	1 cut(s)	562
HindIII	AAGCTT	1 cut(s)	1309
HinfI	GANTC	4 cut(s)	11, 819, 1176, 1213
HpaII	CCGG	8 cut(s)	112, 305, 357, 363, 524, 747, 935, 1274
HphI	GGTGA	3 cut(s)	36, 190, 199
Hpy166II	GTNNAC	7 cut(s)	15, 31, 120, 562, 758, 961, 1096
Hpy188I	TCNGA	5 cut(s)	236, 371, 506, 984, 1218
Hpy188III	TCNNGA	5 cut(s)	73, 112, 606, 1201, 1329
Hpy8I	GTNNAC	7 cut(s)	15, 31, 120, 562, 758, 961, 1096
Hpy99I	CGWCG	3 cut(s)	29, 38, 41
HpyAV	CCTTC	7 cut(s)	104, 118, 163, 175, 316, 1041, 1075
HpyCH4III	ACNGT	4 cut(s)	70, 211, 240, 730
HpyCH4IV	ACGT	6 cut(s)	27, 39, 330, 513, 955, 1029
HpyCH4V	TGCA	7 cut(s)	629, 639, 733, 743, 1194, 1247, 1256
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1253
HpySE526I	ACGT	6 cut(s)	27, 39, 330, 513, 955, 1029
Hsp92II	CATG	8 cut(s)	205, 247, 699, 754, 790, 934, 1204, 1332
Kpn2I	TCCGGA	1 cut(s)	111
KroI	GCCGGC	1 cut(s)	934
KroNI	GCCGGC	1 cut(s)	936
Ksp22I	TGATCA	2 cut(s)	192, 204
Kzo9I	GATC	6 cut(s)	129, 192, 204, 276, 359, 520
LmnI	GCTCC	1 cut(s)	325
Lsp1109I	GCAGC	2 cut(s)	651, 1231
LweI	GCATC	5 cut(s)	562, 752, 862, 1082, 1209
MaeI	CTAG	4 cut(s)	125, 249, 264, 546
MaeII	ACGT	6 cut(s)	27, 39, 330, 513, 955, 1029
MaeIII	GTNAC	2 cut(s)	42, 724
MalI	GATC	6 cut(s)	131, 194, 206, 278, 361, 522
MboI	GATC	6 cut(s)	129, 192, 204, 276, 359, 520
MfeI	CAATTG	3 cut(s)	804, 903, 1315
MflI	RGATCY	3 cut(s)	129, 359, 520
MhlI	GDGCHC	3 cut(s)	189, 330, 1234
MlsI	TGGCCA	1 cut(s)	446
MluNI	TGGCCA	1 cut(s)	446
MlyI	GAGTC	2 cut(s)	20, 828
MmeI	TCCRAC	1 cut(s)	686
Mox20I	TGGCCA	1 cut(s)	446
Mph1103I	ATGCAT	1 cut(s)	1196
MroI	TCCGGA	1 cut(s)	111
MroNI	GCCGGC	1 cut(s)	934
MroXI	GAANNNNTTC	2 cut(s)	617, 1065
MscI	TGGCCA	1 cut(s)	446
MseI	TTAA	5 cut(s)	65, 315, 623, 965, 1259
MslI	CAYNNNNRTG	5 cut(s)	200, 634, 791, 1028, 1199
Msp20I	TGGCCA	1 cut(s)	446
MspCI	CTTAAG	1 cut(s)	964
MspI	CCGG	8 cut(s)	112, 305, 357, 363, 524, 747, 935, 1274
MspR9I	CCNGG	5 cut(s)	305, 306, 364, 525, 663
MunI	CAATTG	3 cut(s)	804, 903, 1315
Mva1269I	GAATGC	1 cut(s)	629
MvaI	CCWGG	1 cut(s)	663
MwoI	GCNNNNNNNGC	1 cut(s)	1253
NaeI	GCCGGC	1 cut(s)	936
NciI	CCSGG	4 cut(s)	305, 306, 364, 525
NdeI	CATATG	2 cut(s)	635, 988
NdeII	GATC	6 cut(s)	129, 192, 204, 276, 359, 520
NgoMIV	GCCGGC	1 cut(s)	934
NlaIII	CATG	8 cut(s)	205, 247, 699, 754, 790, 934, 1204, 1332
NlaIV	GGNNCC	5 cut(s)	122, 131, 309, 361, 522
NmuCI	GTSAC	1 cut(s)	42
NsiI	ATGCAT	1 cut(s)	1196
NspI	RCATGY	2 cut(s)	754, 934
OliI	CACNNNNGTG	1 cut(s)	1028
PaeI	GCATGC	1 cut(s)	754
PagI	TCATGA	2 cut(s)	1200, 1328
PcsI	WCGNNNNNNNCGW	3 cut(s)	30, 33, 281
PctI	GAATGC	1 cut(s)	629
PdiI	GCCGGC	1 cut(s)	936
PdmI	GAANNNNTTC	2 cut(s)	617, 1065
PfeI	GAWTC	2 cut(s)	1176, 1213
PflMI	CCANNNNNTGG	1 cut(s)	696
PfoI	TCCNGGA	1 cut(s)	523
PkrI	GCNGC	3 cut(s)	641, 1006, 1246
Ple19I	CGATCG	1 cut(s)	279
PleI	GAGTC	2 cut(s)	19, 827
PmaCI	CACGTG	2 cut(s)	331, 1030
PmlI	CACGTG	2 cut(s)	331, 1030
PpsI	GAGTC	2 cut(s)	19, 827
Ppu21I	YACGTR	3 cut(s)	331, 514, 1030
PshBI	ATTAAT	1 cut(s)	1259
Psp6I	CCWGG	1 cut(s)	661
PspCI	CACGTG	2 cut(s)	331, 1030
PspGI	CCWGG	1 cut(s)	661
PspN4I	GGNNCC	5 cut(s)	122, 131, 309, 361, 522
PspPI	GGNCC	6 cut(s)	58, 105, 120, 308, 540, 1033
PstI	CTGCAG	1 cut(s)	1249
PsuI	RGATCY	3 cut(s)	129, 359, 520
PvuI	CGATCG	1 cut(s)	279
RsaI	GTAC	3 cut(s)	213, 255, 512
RsaNI	GTAC	3 cut(s)	212, 254, 511
RseI	CAYNNNNRTG	5 cut(s)	200, 634, 791, 1028, 1199
SaqAI	TTAA	5 cut(s)	65, 315, 623, 965, 1259
SatI	GCNGC	3 cut(s)	640, 1005, 1245
Sau3AI	GATC	6 cut(s)	129, 192, 204, 276, 359, 520
Sau96I	GGNCC	6 cut(s)	58, 105, 120, 308, 540, 1033
SchI	GAGTC	2 cut(s)	20, 828
ScrFI	CCNGG	5 cut(s)	305, 306, 364, 525, 663
SduI	GDGCHC	3 cut(s)	189, 330, 1234
SfaNI	GCATC	5 cut(s)	562, 752, 862, 1082, 1209
SfcI	CTRYAG	1 cut(s)	1245
SinI	GGWCC	4 cut(s)	58, 105, 120, 308
SmaI	CCCGGG	1 cut(s)	306
SmiMI	CAYNNNNRTG	5 cut(s)	200, 634, 791, 1028, 1199
SmlI	CTYRAG	1 cut(s)	964
SmoI	CTYRAG	1 cut(s)	964
SphI	GCATGC	1 cut(s)	754
SsiI	CCGC	5 cut(s)	61, 178, 375, 1004, 1290
SspMI	CTAG	4 cut(s)	125, 249, 264, 546
StyD4I	CCNGG	5 cut(s)	303, 304, 362, 523, 661
StyI	CCWWGG	2 cut(s)	124, 877
TaaI	ACNGT	4 cut(s)	70, 211, 240, 730
TaiI	ACGT	6 cut(s)	30, 42, 333, 516, 958, 1032
TaqI	TCGA	9 cut(s)	24, 51, 74, 275, 284, 402, 570, 1069, 1076
TauI	GCSGC	1 cut(s)	1007
TfiI	GAWTC	2 cut(s)	1176, 1213
Tru1I	TTAA	5 cut(s)	65, 315, 623, 965, 1259
Tru9I	TTAA	5 cut(s)	65, 315, 623, 965, 1259
TscAI	CASTG	2 cut(s)	231, 735
TseFI	GTSAC	1 cut(s)	42
TseI	GCWGC	2 cut(s)	639, 1244
Tsp45I	GTSAC	1 cut(s)	42
TspGWI	ACGGA	1 cut(s)	300
TspMI	CCCGGG	1 cut(s)	304
TspRI	CASTG	2 cut(s)	231, 735
Van91I	CCANNNNNTGG	1 cut(s)	696
Vha464I	CTTAAG	1 cut(s)	964
VpaK11BI	GGWCC	4 cut(s)	58, 105, 120, 308
VspI	ATTAAT	1 cut(s)	1259
XapI	RAATTY	3 cut(s)	498, 614, 917
XceI	RCATGY	2 cut(s)	754, 934
XcmI	CCANNNNNNNNNTGG	4 cut(s)	25, 454, 475, 810
XmaI	CCCGGG	1 cut(s)	304
XmaJI	CCTAGG	1 cut(s)	124
XmiI	GTMKAC	1 cut(s)	1095
XmnI	GAANNNNTTC	2 cut(s)	617, 1065
XspI	CTAG	4 cut(s)	125, 249, 264, 546
Zsp2I	ATGCAT	1 cut(s)	1196

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.