Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003716

Physical Location & Seq

Genomic Coordinates Forward (+)

57854130 .. 57857774

Gene Structure 3645 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ20928

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2160 bp

ATGGACATAGAGTCCACCAAACTCGACGTGGATGACGATGTGTCACCCATCGAAGAGGTCCGCTTAACGGTCTCGAACGAAGACGACCCGACCCTTCCAGTATGGACCTTCCGGATGTGGACCCTAGGGATCCTCTCCTGCGTCCTCCTCTCCTTCCTCAACACCTTCTTCTCCTACCGCACCGAGCCCCTGATCATCACCATGATCACCGTACAGGTGGCGACACTGCCCATCGGACGGTTCATGGCTAGGGTACTGCCCACTAGGAAGTTTTCGATCGGGTCGATGGAGTTCTCGCTCAACCCGGGTCCGTTTAACAAGAAGGAGCACGTGCTGATATCCATATTTGCCAATGCCGGATCTGGGTTCGGAAGCGGAACGGCTTATGCTGTTGGCATTGTCGATATAATTAAGGCATTTTATCACAGGAAGATATCGTTCTTGGCCAGTTGGCTTCTTGTCAATACCACACAGGCATTGGGGTATGGGTGGGCTGGAATTCTCCGAAAGTACGTGGTGGATCCGGGAGAGATGTGGTGGCCCTCTAGTGTAGTTCAGGTCAACTTGTTCGATGCCCTACACGAGAAAGACAACAAGCGAATGTCCAGAGCGAAATTCTTCTTAATTGCATTCATATGCAGCTTCTCTTGGTATGTTGTCCCAGGCTACCTTTTCCCAACTATATCAACCATTTCATGGATTTGTTGGATATACCCCAAGTCAGTAACAGTGCAACAAATTGCATCCGGCATGCGTGGACTTGGTGTTGGTGCATTGTCTCTCGACTGGTCTGTTGTAGCCTCGTACCTTCAAAGCCCTTTGATTAGCCCTTTCTTTGCCACTGTCAATGTTGCAGTTGGCTATGTTGCTTTCATGTTTGTGATACTGCCAATTGCCTACTGGGGAGTCAATTTATACAATGCCAAGAACTTCCCAATCTTCTCTTCCCATTTGTTTGATGCCCAAGGTCAAGTATATAACACTTCAGCAATTGTGAATGACAAATTTCAAATTGACATGCCGGCGTATGAAAAACAAGGACGTGTAAACTTAAGTGTGTTTTTTGCTCTGACATATGGTATTGGCTTTGCGGCCATAATATCAACCCTCACTCACGTGGCCCTCTTCAATGGAAGGGAGATATATGAACAATTTCGAGCATCGAAGAAGGATGGAAAGGTAGACATACACACCAAATTGATGAGGAAATACAAGGACATACCTAACTGGTGGTTTCACCTTACTCTTTTGGTGTCATTTGGAATCGCTCTGGCACTATGCATTTTCATGAAAGATGAGATTCCAATGCCGTGGTGGGCACTCATTTTCGCTGCAGTCCTTGCATTAATTTTCACTCTTCCGACGCCGGGACTAAACATTATCACAGAGTACATCATGGGATTGATTTTACCCGGAAAACCGATTCTTAATGTATGCTTCAAAACATATGGTTATATTAGCATGAGTCAGGCAATTTCCTTTCTCAATGATTTCAAGCTTGGCCATTACATGAAGATTCCGCCCAGATCAATGTTTTTAGTTCAGTTGATAGGAACTATTATAGCTGGAACAGTCAATATCGGGGTTGCGTGGTGGCTGTTATCTACTGTGGAAAACATATGTCAAGATCAATTACTCCCTCCTAATAGTCCTTGGACTTGTCCTGGTGATCGCGTCTTCTTTGATGCATCTGTCGTTTGGGGTCTTGTCGGTCCAAAGCGGATATTTGGCCCTCTTGGAAACTACCAAGCACTCAACTGGTTCTTCTTTATAGGTGCATTTGGACCACTCTTGGTATGGTTGTTGCACAGAGCTTTTCCCAGTTATAAATGGATTGGACTTATCAACCTTCCAGTGCTTTTGAATGCAACAGCTGCAATGCCACCGGCTACATCAGTAAACTTCAATTGCTGGATTGTTATTGGAACTATTTTCGGCTACTACATATTTAGATATAGAACGGCATGGTGGCAGAGGTACAATTATGTTCTTTCGGCTGCCTTAGACGCTGGATTGGCTTGCATGGCGGTGCTCTTATACTTCACATTAACCATGAACGGGAAGAGCATATCTTGGTGGGGTGCGGATGGTGAACACTGTGAATTGGCTTCATGTCCCACAGCCAAAGGAATCGTTGTTGATGGTTGTCCTGTCTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006857 GO:0008150 GO:0015833 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

719

Amino Acids

80.73

Weight (kDa)

8.72

Isoelectric Point (pI)

29.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	34 - 682	1.6e-175	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003716)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09930
fragaria_vesca	FvH4_5g34010 FvH4_5g34011
malus_domestica	MD08G1206700.v1.1 MD15G1390200.v1.1 MD15G1390400.v1.1
prunus_persica	Prupe.1G539200_v2.0.a1 Prupe.1G539300_v2.0.a1
pyrus_communis	pycom15g34950 pycom15g34960
rosa_chinensis	RchiOBHm_Chr7g0233451 RchiOBHm_Chr7g0233471
rosa_laevigata	RLG00000001268 RLG00000001269
rosa_multiflora	Rmu_sc0000029.1_g000038 Rmu_sc0000029.1_g000051
rosa_roxburghii	Rroxscaffold_3G00227270 Rroxscaffold_3G00227290
rosa_rugosa	Rorug07G0280800 Rorug07G0280800
rosa_samantha	Rh7AG436600 Rh7AG436700 Rh7BG409700 Rh7BG409800 Rh7CG456500 Rh7CG456700 Rh7DG425800 Rh7DG425900
rosa_wichuraiana	Rw0G008530 Rw0G022500 Rw7G036000 Rw7G036010 Rw7G036030 Rw7G036040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1827
AccB7I	CCANNNNNTGG	1 cut(s)	696
AccI	GTMKAC	1 cut(s)	1182
AccII	CGCG	1 cut(s)	1674
AccIII	TCCGGA	1 cut(s)	111
AciI	CCGC	8 cut(s)	61, 178, 375, 1091, 1520, 1720, 2027, 2084
AclWI	GGATC	5 cut(s)	124, 137, 367, 515, 528
AcoI	YGGCCR	3 cut(s)	444, 1092, 1501
AcsI	RAATTY	3 cut(s)	498, 614, 1004
AcuI	CTGAAG	1 cut(s)	969
AcvI	CACGTG	2 cut(s)	331, 1117
AcyI	GRCGYC	1 cut(s)	1364
AfaI	GTAC	6 cut(s)	213, 255, 512, 806, 1391, 1979
AfiI	CCNNNNNNNGG	6 cut(s)	67, 237, 363, 696, 1367, 2058
AflII	CTTAAG	1 cut(s)	1051
AflIII	ACRYGT	1 cut(s)	1042
AgsI	TTSAA	7 cut(s)	812, 1010, 1129, 1441, 1495, 1864, 1906
AhdI	GACNNNNNGTC	2 cut(s)	10, 40
AjiI	CACGTC	2 cut(s)	28, 1043
AjnI	CCWGG	2 cut(s)	661, 1663
AjuI	GAANNNNNNNTTGG	2 cut(s)	928, 960
AleI	CACNNNNGTG	1 cut(s)	1115
AluBI	AGCT	5 cut(s)	642, 1498, 1565, 1814, 1874
AluI	AGCT	5 cut(s)	642, 1498, 1565, 1814, 1874
Alw21I	GWGCWC	2 cut(s)	330, 2034
Alw26I	GTCTC	2 cut(s)	76, 783
AlwI	GGATC	5 cut(s)	124, 137, 367, 515, 528
Ama87I	CYCGRG	1 cut(s)	304
Aor13HI	TCCGGA	1 cut(s)	111
AoxI	GGCC	6 cut(s)	444, 539, 1092, 1119, 1501, 1729
ApeKI	GCWGC	4 cut(s)	639, 1331, 1874, 1997
ApoI	RAATTY	3 cut(s)	498, 614, 1004
AseI	ATTAAT	1 cut(s)	1346
Asp700I	GAANNNNTTC	2 cut(s)	617, 1152
AspA2I	CCTAGG	1 cut(s)	124
AspS9I	GGNCC	9 cut(s)	58, 105, 120, 308, 540, 1120, 1712, 1730, 1784
AsuC2I	CCSGG	5 cut(s)	305, 306, 525, 1368, 1413
AsuHPI	GGTGA	6 cut(s)	36, 190, 199, 1229, 1679, 2102
AvaI	CYCGRG	1 cut(s)	304
AvaII	GGWCC	6 cut(s)	58, 105, 120, 308, 1712, 1784
AvrII	CCTAGG	1 cut(s)	124
BaeGI	GKGCMC	1 cut(s)	1321
BalI	TGGCCA	2 cut(s)	446, 1503
BamHI	GGATCC	2 cut(s)	129, 520
BanII	GRGCYC	1 cut(s)	189
BauI	CACGAG	1 cut(s)	581
BbrPI	CACGTG	2 cut(s)	331, 1117
BbsI	GAAGAC	3 cut(s)	87, 1669, 2146
Bbv12I	GWGCWC	2 cut(s)	330, 2034
BbvI	GCAGC	4 cut(s)	651, 1318, 1861, 1984
BccI	CCATC	6 cut(s)	56, 239, 280, 1166, 2081, 2135
BceAI	ACGGC	3 cut(s)	396, 1294, 1977
BciT130I	CCWGG	2 cut(s)	663, 1665
BclI	TGATCA	2 cut(s)	192, 204
BcnI	CCSGG	5 cut(s)	305, 306, 525, 1368, 1413
BcoDI	GTCTC	2 cut(s)	76, 783
BfaI	CTAG	4 cut(s)	125, 249, 264, 546
BfmI	CTRYAG	1 cut(s)	1332
BfrI	CTTAAG	1 cut(s)	1051
BisI	GCNGC	5 cut(s)	640, 1092, 1332, 1875, 1998
BlnI	CCTAGG	1 cut(s)	124
BlsI	GCNGC	5 cut(s)	641, 1093, 1333, 1876, 1999
Bme1390I	CCNGG	7 cut(s)	305, 306, 525, 663, 1368, 1413, 1665
Bme18I	GGWCC	6 cut(s)	58, 105, 120, 308, 1712, 1784
BmeRI	GACNNNNNGTC	2 cut(s)	10, 40
BmeT110I	CYCGRG	1 cut(s)	304
BmgBI	CACGTC	2 cut(s)	28, 1043
BmgT120I	GGNCC	9 cut(s)	58, 105, 120, 308, 540, 1120, 1712, 1730, 1784
BmiI	GGNNCC	4 cut(s)	122, 131, 309, 522
BmrFI	CCNGG	7 cut(s)	305, 306, 525, 663, 1368, 1413, 1665
BmrI	ACTGGG	2 cut(s)	910, 1815
BmsI	GCATC	6 cut(s)	562, 752, 949, 1169, 1675, 1697
BmuI	ACTGGG	2 cut(s)	910, 1815
BpiI	GAAGAC	3 cut(s)	87, 1669, 2146
BpuMI	CCSGG	5 cut(s)	305, 306, 525, 1368, 1413
BsaAI	YACGTR	3 cut(s)	331, 514, 1117
BsaHI	GRCGYC	1 cut(s)	1364
BsaI	GGTCTC	1 cut(s)	76
BsaJI	CCNNGG	6 cut(s)	124, 304, 661, 964, 1310, 1652
BsaWI	WCCGGW	1 cut(s)	111
Bsc4I	CCNNNNNNNGG	6 cut(s)	67, 237, 363, 696, 1367, 2058
Bse118I	RCCGGY	2 cut(s)	1021, 1885
Bse1I	ACTGG	8 cut(s)	98, 447, 791, 905, 1232, 1763, 1821, 1853
Bse3DI	GCAATG	1 cut(s)	1884
BseAI	TCCGGA	1 cut(s)	111
BseBI	CCWGG	2 cut(s)	663, 1665
BseDI	CCNNGG	6 cut(s)	124, 304, 661, 964, 1310, 1652
BseGI	GGATG	5 cut(s)	37, 120, 743, 1177, 2092
BseLI	CCNNNNNNNGG	6 cut(s)	67, 237, 363, 696, 1367, 2058
BseMI	GCAATG	1 cut(s)	1884
BseNI	ACTGG	8 cut(s)	98, 447, 791, 905, 1232, 1763, 1821, 1853
BseRI	GAGGAG	1 cut(s)	137
BseSI	GKGCMC	1 cut(s)	1321
BseXI	GCAGC	4 cut(s)	651, 1318, 1861, 1984
Bsh1236I	CGCG	1 cut(s)	1674
Bsh1285I	CGRYCG	1 cut(s)	279
BshFI	GGCC	6 cut(s)	446, 541, 1094, 1121, 1503, 1731
BsiEI	CGRYCG	1 cut(s)	279
BsiHKAI	GWGCWC	2 cut(s)	330, 2034
BsiHKCI	CYCGRG	1 cut(s)	304
BsiSI	CCGG	9 cut(s)	112, 305, 357, 524, 747, 1022, 1367, 1413, 1886
BslFI	GGGAC	3 cut(s)	644, 1383, 2100
BslI	CCNNNNNNNGG	6 cut(s)	67, 237, 363, 696, 1367, 2058
BsmAI	GTCTC	2 cut(s)	76, 783
BsmFI	GGGAC	3 cut(s)	644, 1383, 2100
BsmI	GAATGC	2 cut(s)	629, 1870
BsnI	GGCC	6 cut(s)	446, 541, 1094, 1121, 1503, 1731
Bso31I	GGTCTC	1 cut(s)	76
BsoBI	CYCGRG	1 cut(s)	304
Bsp1286I	GDGCHC	4 cut(s)	189, 330, 1321, 2034
Bsp13I	TCCGGA	1 cut(s)	111
Bsp143I	GATC	9 cut(s)	129, 192, 204, 276, 359, 520, 1526, 1627, 1669
BspACI	CCGC	8 cut(s)	61, 178, 375, 1091, 1520, 1720, 2027, 2084
BspANI	GGCC	6 cut(s)	446, 541, 1094, 1121, 1503, 1731
BspEI	TCCGGA	1 cut(s)	111
BspFNI	CGCG	1 cut(s)	1674
BspHI	TCATGA	1 cut(s)	1287
BspLI	GGNNCC	4 cut(s)	122, 131, 309, 522
BspMAI	CTGCAG	1 cut(s)	1336
BspPI	GGATC	5 cut(s)	124, 137, 367, 515, 528
BspQI	GCTCTTC	1 cut(s)	2057
BspTI	CTTAAG	1 cut(s)	1051
BspTNI	GGTCTC	1 cut(s)	76
BsrDI	GCAATG	1 cut(s)	1884
BsrFI	RCCGGY	2 cut(s)	1021, 1885
BsrI	ACTGG	8 cut(s)	98, 447, 791, 905, 1232, 1763, 1821, 1853
BssAI	RCCGGY	2 cut(s)	1021, 1885
BssECI	CCNNGG	6 cut(s)	124, 304, 661, 964, 1310, 1652
BssMI	GATC	9 cut(s)	129, 192, 204, 276, 359, 520, 1526, 1627, 1669
BssNI	GRCGYC	1 cut(s)	1364
BssSI	CACGAG	1 cut(s)	581
BssT1I	CCWWGG	3 cut(s)	124, 964, 1652
Bst2BI	CACGAG	1 cut(s)	581
Bst2UI	CCWGG	2 cut(s)	663, 1665
Bst4CI	ACNGT	8 cut(s)	70, 211, 240, 730, 844, 1573, 1609, 2099
Bst6I	CTCTTC	5 cut(s)	48, 949, 1130, 1362, 2057
BstACI	GRCGYC	1 cut(s)	1364
BstAFI	CTTAAG	1 cut(s)	1051
BstAPI	GCANNNNNTGC	2 cut(s)	1340, 1874
BstBAI	YACGTR	3 cut(s)	331, 514, 1117
BstC8I	GCNNGC	3 cut(s)	752, 1023, 2020
BstDEI	CTNAG	1 cut(s)	2002
BstDSI	CCRYGG	1 cut(s)	1310
BstF5I	GGATG	5 cut(s)	37, 120, 743, 1177, 2092
BstFNI	CGCG	1 cut(s)	1674
BstKTI	GATC	9 cut(s)	132, 195, 207, 279, 362, 523, 1529, 1630, 1672
BstMAI	GTCTC	2 cut(s)	76, 783
BstMBI	GATC	9 cut(s)	129, 192, 204, 276, 359, 520, 1526, 1627, 1669
BstMCI	CGRYCG	1 cut(s)	279
BstMWI	GCNNNNNNNGC	5 cut(s)	1340, 1874, 2006, 2015, 2024
BstNI	CCWGG	2 cut(s)	663, 1665
BstNSI	RCATGY	2 cut(s)	754, 1021
BstSCI	CCNGG	7 cut(s)	303, 304, 523, 661, 1366, 1411, 1663
BstSFI	CTRYAG	1 cut(s)	1332
BstSLI	GKGCMC	1 cut(s)	1321
BstUI	CGCG	1 cut(s)	1674
BstV1I	GCAGC	4 cut(s)	651, 1318, 1861, 1984
BstV2I	GAAGAC	3 cut(s)	87, 1669, 2146
BstX2I	RGATCY	3 cut(s)	129, 359, 520
BstXI	CCANNNNNNTGG	1 cut(s)	1311
BstYI	RGATCY	3 cut(s)	129, 359, 520
BsuRI	GGCC	6 cut(s)	446, 541, 1094, 1121, 1503, 1731
BtgI	CCRYGG	1 cut(s)	1310
BtrI	CACGTC	2 cut(s)	28, 1043
BtsCI	GGATG	5 cut(s)	37, 120, 743, 1177, 2092
BtsI	GCAGTG	1 cut(s)	224
BtsIMutI	CAGTG	5 cut(s)	224, 735, 840, 1860, 2095
Cac8I	GCNNGC	3 cut(s)	752, 1023, 2020
CciI	TCATGA	1 cut(s)	1287
Cfr10I	RCCGGY	2 cut(s)	1021, 1885
Cfr13I	GGNCC	9 cut(s)	58, 105, 120, 308, 540, 1120, 1712, 1730, 1784
Cfr9I	CCCGGG	1 cut(s)	304
CseI	GACGC	4 cut(s)	130, 1372, 1663, 2015
Csp6I	GTAC	6 cut(s)	212, 254, 511, 805, 1390, 1978
CviQI	GTAC	6 cut(s)	212, 254, 511, 805, 1390, 1978
DdeI	CTNAG	1 cut(s)	2002
DpnI	GATC	9 cut(s)	131, 194, 206, 278, 361, 522, 1528, 1629, 1671
DpnII	GATC	9 cut(s)	129, 192, 204, 276, 359, 520, 1526, 1627, 1669
DriI	GACNNNNNGTC	2 cut(s)	10, 40
EaeI	YGGCCR	3 cut(s)	444, 1092, 1501
Eam1104I	CTCTTC	5 cut(s)	48, 949, 1130, 1362, 2057
Eam1105I	GACNNNNNGTC	2 cut(s)	10, 40
EarI	CTCTTC	5 cut(s)	48, 949, 1130, 1362, 2057
EciI	GGCGGA	1 cut(s)	1509
Eco130I	CCWWGG	3 cut(s)	124, 964, 1652
Eco24I	GRGCYC	1 cut(s)	189
Eco31I	GGTCTC	1 cut(s)	76
Eco32I	GATATC	2 cut(s)	339, 435
Eco47I	GGWCC	6 cut(s)	58, 105, 120, 308, 1712, 1784
Eco57I	CTGAAG	1 cut(s)	969
Eco72I	CACGTG	2 cut(s)	331, 1117
Eco88I	CYCGRG	1 cut(s)	304
EcoRI	GAATTC	1 cut(s)	498
EcoRII	CCWGG	2 cut(s)	661, 1663
EcoRV	GATATC	2 cut(s)	339, 435
EcoT14I	CCWWGG	3 cut(s)	124, 964, 1652
EcoT22I	ATGCAT	2 cut(s)	1283, 1690
EcoT38I	GRGCYC	1 cut(s)	189
ErhI	CCWWGG	3 cut(s)	124, 964, 1652
FaqI	GGGAC	3 cut(s)	644, 1383, 2100
FauNDI	CATATG	4 cut(s)	635, 1075, 1447, 1619
FbaI	TGATCA	2 cut(s)	192, 204
FblI	GTMKAC	1 cut(s)	1182
Fnu4HI	GCNGC	5 cut(s)	640, 1092, 1332, 1875, 1998
FokI	GGATG	5 cut(s)	44, 127, 730, 1184, 2099
FriOI	GRGCYC	1 cut(s)	189
Fsp4HI	GCNGC	5 cut(s)	640, 1092, 1332, 1875, 1998
FspBI	CTAG	4 cut(s)	125, 249, 264, 546
GluI	GCNGC	5 cut(s)	640, 1092, 1332, 1875, 1998
HaeIII	GGCC	6 cut(s)	446, 541, 1094, 1121, 1503, 1731
HapII	CCGG	9 cut(s)	112, 305, 357, 524, 747, 1022, 1367, 1413, 1886
HgaI	GACGC	4 cut(s)	130, 1372, 1663, 2015
Hin1I	GRCGYC	1 cut(s)	1364
HincII	GTYRAC	1 cut(s)	562
HindII	GTYRAC	1 cut(s)	562
HindIII	AAGCTT	1 cut(s)	1496
HinfI	GANTC	8 cut(s)	11, 906, 1263, 1300, 1423, 1465, 1516, 2130
HpaII	CCGG	9 cut(s)	112, 305, 357, 524, 747, 1022, 1367, 1413, 1886
HphI	GGTGA	6 cut(s)	36, 190, 199, 1229, 1679, 2102
Hpy166II	GTNNAC	8 cut(s)	15, 120, 562, 758, 1048, 1183, 1900, 2093
Hpy188I	TCNGA	5 cut(s)	236, 371, 506, 1071, 1362
Hpy188III	TCNNGA	6 cut(s)	73, 112, 606, 782, 1288, 1625
Hpy8I	GTNNAC	8 cut(s)	15, 120, 562, 758, 1048, 1183, 1900, 2093
Hpy99I	CGWCG	2 cut(s)	29, 1366
HpyAV	CCTTC	9 cut(s)	104, 118, 163, 175, 316, 818, 1128, 1162, 1859
HpyCH4III	ACNGT	8 cut(s)	70, 211, 240, 730, 844, 1573, 1609, 2099
HpyCH4IV	ACGT	5 cut(s)	27, 330, 513, 1042, 1116
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1340, 1874, 2006, 2015, 2024
HpyF3I	CTNAG	1 cut(s)	2002
HpySE526I	ACGT	5 cut(s)	27, 330, 513, 1042, 1116
Hsp92I	GRCGYC	1 cut(s)	1364
Kpn2I	TCCGGA	1 cut(s)	111
KroI	GCCGGC	1 cut(s)	1021
KroNI	GCCGGC	1 cut(s)	1023
Ksp22I	TGATCA	2 cut(s)	192, 204
Kzo9I	GATC	9 cut(s)	129, 192, 204, 276, 359, 520, 1526, 1627, 1669
LguI	GCTCTTC	1 cut(s)	2057
LmnI	GCTCC	1 cut(s)	325
Lsp1109I	GCAGC	4 cut(s)	651, 1318, 1861, 1984
LweI	GCATC	6 cut(s)	562, 752, 949, 1169, 1675, 1697
MaeI	CTAG	4 cut(s)	125, 249, 264, 546
MaeII	ACGT	5 cut(s)	27, 330, 513, 1042, 1116
MaeIII	GTNAC	2 cut(s)	42, 724
MalI	GATC	9 cut(s)	131, 194, 206, 278, 361, 522, 1528, 1629, 1671
MboI	GATC	9 cut(s)	129, 192, 204, 276, 359, 520, 1526, 1627, 1669
MfeI	CAATTG	3 cut(s)	891, 990, 1906
MflI	RGATCY	3 cut(s)	129, 359, 520
MhlI	GDGCHC	4 cut(s)	189, 330, 1321, 2034
MlsI	TGGCCA	2 cut(s)	446, 1503
MluNI	TGGCCA	2 cut(s)	446, 1503
MlyI	GAGTC	3 cut(s)	20, 915, 1474
MmeI	TCCRAC	2 cut(s)	686, 1385
Mox20I	TGGCCA	2 cut(s)	446, 1503
Mph1103I	ATGCAT	2 cut(s)	1283, 1690
MroI	TCCGGA	1 cut(s)	111
MroNI	GCCGGC	1 cut(s)	1021
MroXI	GAANNNNTTC	2 cut(s)	617, 1152
MscI	TGGCCA	2 cut(s)	446, 1503
MseI	TTAA	8 cut(s)	65, 315, 411, 623, 1052, 1346, 1428, 2048
MslI	CAYNNNNRTG	6 cut(s)	200, 634, 878, 1115, 1286, 2027
Msp20I	TGGCCA	2 cut(s)	446, 1503
MspA1I	CMGCKG	1 cut(s)	1874
MspCI	CTTAAG	1 cut(s)	1051
MspI	CCGG	9 cut(s)	112, 305, 357, 524, 747, 1022, 1367, 1413, 1886
MspR9I	CCNGG	7 cut(s)	305, 306, 525, 663, 1368, 1413, 1665
MunI	CAATTG	3 cut(s)	891, 990, 1906
Mva1269I	GAATGC	2 cut(s)	629, 1870
MvaI	CCWGG	2 cut(s)	663, 1665
MvnI	CGCG	1 cut(s)	1674
MwoI	GCNNNNNNNGC	5 cut(s)	1340, 1874, 2006, 2015, 2024
NaeI	GCCGGC	1 cut(s)	1023
NciI	CCSGG	5 cut(s)	305, 306, 525, 1368, 1413
NdeI	CATATG	4 cut(s)	635, 1075, 1447, 1619
NdeII	GATC	9 cut(s)	129, 192, 204, 276, 359, 520, 1526, 1627, 1669
NgoMIV	GCCGGC	1 cut(s)	1021
NlaIV	GGNNCC	4 cut(s)	122, 131, 309, 522
NmuCI	GTSAC	1 cut(s)	42
NsiI	ATGCAT	2 cut(s)	1283, 1690
NspI	RCATGY	2 cut(s)	754, 1021
OliI	CACNNNNGTG	1 cut(s)	1115
PaeI	GCATGC	1 cut(s)	754
PagI	TCATGA	1 cut(s)	1287
PciSI	GCTCTTC	1 cut(s)	2057
PcsI	WCGNNNNNNNCGW	2 cut(s)	33, 281
PctI	GAATGC	2 cut(s)	629, 1870
PdiI	GCCGGC	1 cut(s)	1023
PdmI	GAANNNNTTC	2 cut(s)	617, 1152
PfeI	GAWTC	5 cut(s)	1263, 1300, 1423, 1516, 2130
PflMI	CCANNNNNTGG	1 cut(s)	696
PfoI	TCCNGGA	1 cut(s)	523
PkrI	GCNGC	5 cut(s)	641, 1093, 1333, 1876, 1999
Ple19I	CGATCG	1 cut(s)	279
PleI	GAGTC	3 cut(s)	19, 914, 1473
PmaCI	CACGTG	2 cut(s)	331, 1117
PmlI	CACGTG	2 cut(s)	331, 1117
PpsI	GAGTC	3 cut(s)	19, 914, 1473
Ppu21I	YACGTR	3 cut(s)	331, 514, 1117
PshBI	ATTAAT	1 cut(s)	1346
PsiI	TTATAA	1 cut(s)	1827
Psp6I	CCWGG	2 cut(s)	661, 1663
PspCI	CACGTG	2 cut(s)	331, 1117
PspGI	CCWGG	2 cut(s)	661, 1663
PspN4I	GGNNCC	4 cut(s)	122, 131, 309, 522
PspPI	GGNCC	9 cut(s)	58, 105, 120, 308, 540, 1120, 1712, 1730, 1784
PstI	CTGCAG	1 cut(s)	1336
PsuI	RGATCY	3 cut(s)	129, 359, 520
PvuI	CGATCG	1 cut(s)	279
PvuII	CAGCTG	1 cut(s)	1874
RsaI	GTAC	6 cut(s)	213, 255, 512, 806, 1391, 1979
RsaNI	GTAC	6 cut(s)	212, 254, 511, 805, 1390, 1978
RseI	CAYNNNNRTG	6 cut(s)	200, 634, 878, 1115, 1286, 2027
SapI	GCTCTTC	1 cut(s)	2057
SaqAI	TTAA	8 cut(s)	65, 315, 411, 623, 1052, 1346, 1428, 2048
SatI	GCNGC	5 cut(s)	640, 1092, 1332, 1875, 1998
Sau3AI	GATC	9 cut(s)	129, 192, 204, 276, 359, 520, 1526, 1627, 1669
Sau96I	GGNCC	9 cut(s)	58, 105, 120, 308, 540, 1120, 1712, 1730, 1784
SchI	GAGTC	3 cut(s)	20, 915, 1474
ScrFI	CCNGG	7 cut(s)	305, 306, 525, 663, 1368, 1413, 1665
SduI	GDGCHC	4 cut(s)	189, 330, 1321, 2034
SfaNI	GCATC	6 cut(s)	562, 752, 949, 1169, 1675, 1697
SfcI	CTRYAG	1 cut(s)	1332
SinI	GGWCC	6 cut(s)	58, 105, 120, 308, 1712, 1784
SmaI	CCCGGG	1 cut(s)	306
SmiMI	CAYNNNNRTG	6 cut(s)	200, 634, 878, 1115, 1286, 2027
SmlI	CTYRAG	1 cut(s)	1051
SmoI	CTYRAG	1 cut(s)	1051
SphI	GCATGC	1 cut(s)	754
SsiI	CCGC	8 cut(s)	61, 178, 375, 1091, 1520, 1720, 2027, 2084
SspMI	CTAG	4 cut(s)	125, 249, 264, 546
StyD4I	CCNGG	7 cut(s)	303, 304, 523, 661, 1366, 1411, 1663
StyI	CCWWGG	3 cut(s)	124, 964, 1652
TaaI	ACNGT	8 cut(s)	70, 211, 240, 730, 844, 1573, 1609, 2099
TaiI	ACGT	5 cut(s)	30, 333, 516, 1045, 1119
TaqII	GACCGA	1 cut(s)	1700
TatI	WGTACW	1 cut(s)	1389
TauI	GCSGC	1 cut(s)	1094
TfiI	GAWTC	5 cut(s)	1263, 1300, 1423, 1516, 2130
Tru1I	TTAA	8 cut(s)	65, 315, 411, 623, 1052, 1346, 1428, 2048
Tru9I	TTAA	8 cut(s)	65, 315, 411, 623, 1052, 1346, 1428, 2048
TscAI	CASTG	5 cut(s)	231, 735, 847, 1860, 2102
TseFI	GTSAC	1 cut(s)	42
TseI	GCWGC	4 cut(s)	639, 1331, 1874, 1997
Tsp45I	GTSAC	1 cut(s)	42
TspGWI	ACGGA	1 cut(s)	300
TspMI	CCCGGG	1 cut(s)	304
TspRI	CASTG	5 cut(s)	231, 735, 847, 1860, 2102
Van91I	CCANNNNNTGG	1 cut(s)	696
Vha464I	CTTAAG	1 cut(s)	1051
VpaK11BI	GGWCC	6 cut(s)	58, 105, 120, 308, 1712, 1784
VspI	ATTAAT	1 cut(s)	1346
XapI	RAATTY	3 cut(s)	498, 614, 1004
XceI	RCATGY	2 cut(s)	754, 1021
XcmI	CCANNNNNNNNNTGG	5 cut(s)	25, 475, 897, 1311, 1794
XmaI	CCCGGG	1 cut(s)	304
XmaJI	CCTAGG	1 cut(s)	124
XmiI	GTMKAC	1 cut(s)	1182
XmnI	GAANNNNTTC	2 cut(s)	617, 1152
XspI	CTAG	4 cut(s)	125, 249, 264, 546
Zsp2I	ATGCAT	2 cut(s)	1283, 1690

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.