Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0003176

Physical Location & Seq

Genomic Coordinates Reverse (-)

9736015 .. 9737233

Gene Structure 1219 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g15631.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1020 bp

ATGCATCTCGGTTGTGTCACTCAGTTTGAAGGTTCGATCCTTTCAAATAGCCCAATGGGAATTCAACGTTCTTTCCCAGTCGGAGATCGCCAAAATGGCCGAGGCCCAAATCTTTCAGAGCATGTACTACGACTCCGTCACCGGGAATCCCATCCCAGGTGGGTTGCTGGACCCCAGATTGGGCCCTGCCAACCGCTACAGTGGCAACTGCGCCACTTGCTCCGCGACTGCCCGGGACACTTTGGGTATTTCATGCTTTCCCTCCCTGTTTTCAATGTTGGGTATTTGAATGTTGTTGTGAACATTTTGAAGTGCATCTGTAAATTGTGCTCTAGAATTTTGTTCGATGAGAAATTGAGAAGCGGCCAGAAGATGATGAGGGAGACAGTGAAGGAGTGTGTTAAGCCCTTGACGAATCATAGAGCAGTTAAGTGCTCCCATTGTGGGTATGTGAATGGTAATGTGAGGAGGGATCCGGGCGATGTGGGAATTCAACATGATCGTTCGCAACGAACTGTTAATGGTGTTGGTGTTGTGGTCGAGGAGTTTAAGTCGGTGGTTCCGGCCAAGGCGGTTAATAATGTGCAGCAGAGTTTTTTGCTTGACCCGGTTAGAGTTTATTCTCTATTTAGGAAGATGCTTGATGTGGATTGCCAGTTCCTGTGTCTTAAAACTCGACCGGAGAATCTTCTGTTTACTTGCATTCTTGTGCCGCCTGTAGCTATTCGGTCTTCGGTTATTATGGGTGGATCGCAGAGTAATGAGGATGATGTGACTGTGAGGCTGCAGAGGATTATCCAAGCAAATGCGAGACTTCGACTGCAACTATCATCTGCAGGAAGTTCCCCTGCTGGGGTATTGGCTTGTTGGCAGGAGCTTCAGATTGAGGTTGCACAGTATATAAATAGTGAGGCTCGTGTAATCGTTCCGCTGAGCTCTAGAGCTCATAAGCCTATGAAGCCATTGAGTGGTTTGGTGCAGCGCCTCAAAGGGAAGACAGGAGGTTTCGTGGAACTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0001817 GO:0001819 GO:0002376 GO:0003674 GO:0003824 GO:0003899 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005666 GO:0005737 GO:0005829 GO:0006139 GO:0006351 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016070 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019438 GO:0030880 GO:0031974 GO:0031981 GO:0032479 GO:0032481 GO:0032648 GO:0032728 GO:0032774 GO:0032991 GO:0034062 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045087 GO:0046483 GO:0048518 GO:0050789 GO:0050896 GO:0051239 GO:0051240 GO:0055029 GO:0061695 GO:0065007 GO:0070013 GO:0071704 GO:0090304 GO:0097659 GO:0097747 GO:0140098 GO:1901360 GO:1901362 GO:1901576 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko01100 ko03020 ko04623 ko05169 map00230 map00240 map01100 map03020 map04623 map05169

Pfam Domains

Protein Families

RNA_pol_Rpb1_1 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RNA_pol_Rpb1_5

Protein Analysis

340

Amino Acids

37.88

Weight (kDa)

9.66

Isoelectric Point (pI)

51.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RNA_pol_Rpb1_1	PF04997	75 - 336	1.9e-46	RNA polymerase Rpb1, domain 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0003176)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G60040 AT5G60040
fragaria_vesca	FvH4_3g34290 FvH4_3g34290 FvH4_3g34290 FvH4_6g15631
malus_domestica	MD03G1106800.v1.1 MD09G1157000.v1.1
prunus_persica	Prupe.6G089600_v2.0.a1 Prupe.6G089600_v2.0.a1
pyrus_communis	pycom03g08620 pycom09g07570
rosa_chinensis	RchiOBHm_Chr3g0469301 RchiOBHm_Chr3g0469321 RchiOBHm_Chr5g0061861
rosa_laevigata	RLG00000024360 RLG00000035511
rosa_multiflora	Rmu_sc0004134.1_g000001 Rmu_sc0011641.1_g000013 Rmu_sc0011641.1_g000015 Rmu_sc0019271.1_g000001 Rmu_sc0022191.1_g000001
rosa_roxburghii	Rroxscaffold_1G00018870 Rroxscaffold_6G00411990 Rroxscaffold_6G00412000
rosa_rugosa	Rorug03G0100400 Rorug05G0344900 Rorug05G0345000
rosa_samantha	Rh3AG149800 Rh3BG173400 Rh3CG164500 Rh3DG202000 Rh5AG405500 Rh5BG418300 Rh5CG442800 Rh5DG432400
rosa_wichuraiana	Rw5G038070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	968
AccII	CGCG	1 cut(s)	225
AciI	CCGC	6 cut(s)	194, 223, 363, 572, 713, 929
AclI	AACGTT	1 cut(s)	67
AclWI	GGATC	4 cut(s)	31, 467, 480, 757
AcoI	YGGCCR	3 cut(s)	97, 364, 564
AcsI	RAATTY	3 cut(s)	60, 336, 489
AcuI	CTGAAG	1 cut(s)	863
AfaI	GTAC	1 cut(s)	126
AfiI	CCNNNNNNNGG	8 cut(s)	142, 156, 179, 180, 444, 852, 853, 968
AgsI	TTSAA	7 cut(s)	29, 45, 65, 274, 289, 310, 494
AjnI	CCWGG	1 cut(s)	155
AloI	GAACNNNNNNTCC	2 cut(s)	641, 673
AluBI	AGCT	4 cut(s)	722, 877, 936, 944
AluI	AGCT	4 cut(s)	722, 877, 936, 944
Alw21I	GWGCWC	4 cut(s)	332, 437, 938, 946
Alw26I	GTCTC	2 cut(s)	377, 805
AlwI	GGATC	4 cut(s)	31, 467, 480, 757
AlwNI	CAGNNNCTG	1 cut(s)	661
Ama87I	CYCGRG	1 cut(s)	232
AoxI	GGCC	5 cut(s)	97, 103, 182, 364, 564
ApaI	GGGCCC	1 cut(s)	186
ApeKI	GCWGC	3 cut(s)	586, 784, 979
ApoI	RAATTY	3 cut(s)	60, 336, 489
AspLEI	GCGC	2 cut(s)	213, 984
AspS9I	GGNCC	4 cut(s)	104, 170, 182, 183
AsuC2I	CCSGG	5 cut(s)	143, 233, 234, 477, 608
AsuHPI	GGTGA	1 cut(s)	131
AvaI	CYCGRG	1 cut(s)	232
AvaII	GGWCC	1 cut(s)	170
BaeGI	GKGCMC	1 cut(s)	186
BamHI	GGATCC	1 cut(s)	472
BanII	GRGCYC	3 cut(s)	186, 938, 946
BauI	CACGAG	1 cut(s)	915
BbsI	GAAGAC	2 cut(s)	723, 1001
Bbv12I	GWGCWC	4 cut(s)	332, 437, 938, 946
BbvI	GCAGC	3 cut(s)	598, 771, 991
BccI	CCATC	1 cut(s)	159
BciT130I	CCWGG	1 cut(s)	157
BcnI	CCSGG	5 cut(s)	143, 233, 234, 477, 608
BcoDI	GTCTC	2 cut(s)	377, 805
BfaI	CTAG	2 cut(s)	333, 939
BfmI	CTRYAG	4 cut(s)	197, 717, 785, 834
BfoI	RGCGCY	1 cut(s)	985
BglI	GCCNNNNNGGC	1 cut(s)	96
BisI	GCNGC	5 cut(s)	364, 587, 713, 785, 980
BlpI	GCTNAGC	1 cut(s)	932
BlsI	GCNGC	5 cut(s)	365, 588, 714, 786, 981
Bme1390I	CCNGG	6 cut(s)	143, 157, 233, 234, 477, 608
Bme18I	GGWCC	1 cut(s)	170
BmeT110I	CYCGRG	1 cut(s)	232
BmgT120I	GGNCC	4 cut(s)	104, 170, 182, 183
BmiI	GGNNCC	4 cut(s)	172, 184, 474, 561
BmrFI	CCNGG	6 cut(s)	143, 157, 233, 234, 477, 608
BmrI	ACTGGG	1 cut(s)	71
BmsI	GCATC	3 cut(s)	13, 324, 627
BmuI	ACTGGG	1 cut(s)	71
BpiI	GAAGAC	2 cut(s)	723, 1001
Bpu1102I	GCTNAGC	1 cut(s)	932
BpuMI	CCSGG	5 cut(s)	143, 233, 234, 477, 608
BsaJI	CCNNGG	4 cut(s)	100, 155, 232, 567
BsaWI	WCCGGW	1 cut(s)	679
BsaXI	ACNNNNNCTCC	5 cut(s)	117, 147, 536, 566, 993
Bsc4I	CCNNNNNNNGG	8 cut(s)	142, 156, 179, 180, 444, 852, 853, 968
Bse1I	ACTGG	2 cut(s)	77, 655
BseBI	CCWGG	1 cut(s)	157
BseDI	CCNNGG	4 cut(s)	100, 155, 232, 567
BseGI	GGATG	2 cut(s)	151, 772
BseLI	CCNNNNNNNGG	8 cut(s)	142, 156, 179, 180, 444, 852, 853, 968
BseMII	CTCAG	2 cut(s)	35, 923
BseNI	ACTGG	2 cut(s)	77, 655
BseRI	GAGGAG	2 cut(s)	481, 557
BseSI	GKGCMC	1 cut(s)	186
BseXI	GCAGC	3 cut(s)	598, 771, 991
BseYI	CCCAGC	1 cut(s)	851
BsgI	GTGCAG	2 cut(s)	605, 998
Bsh1236I	CGCG	1 cut(s)	225
Bsh1285I	CGRYCG	1 cut(s)	680
BshFI	GGCC	5 cut(s)	99, 105, 184, 366, 566
BsiEI	CGRYCG	1 cut(s)	680
BsiHKAI	GWGCWC	4 cut(s)	332, 437, 938, 946
BsiHKCI	CYCGRG	1 cut(s)	232
BsiSI	CCGG	6 cut(s)	142, 233, 476, 563, 608, 680
BslFI	GGGAC	1 cut(s)	249
BslI	CCNNNNNNNGG	8 cut(s)	142, 156, 179, 180, 444, 852, 853, 968
BsmAI	GTCTC	2 cut(s)	377, 805
BsmFI	GGGAC	1 cut(s)	249
BsmI	GAATGC	1 cut(s)	702
BsnI	GGCC	5 cut(s)	99, 105, 184, 366, 566
BsoBI	CYCGRG	1 cut(s)	232
Bsp120I	GGGCCC	1 cut(s)	182
Bsp1286I	GDGCHC	5 cut(s)	186, 332, 437, 938, 946
Bsp143I	GATC	5 cut(s)	36, 85, 472, 499, 749
Bsp1720I	GCTNAGC	1 cut(s)	932
BspACI	CCGC	6 cut(s)	194, 223, 363, 572, 713, 929
BspANI	GGCC	5 cut(s)	99, 105, 184, 366, 566
BspCNI	CTCAG	2 cut(s)	34, 924
BspFNI	CGCG	1 cut(s)	225
BspLI	GGNNCC	4 cut(s)	172, 184, 474, 561
BspMAI	CTGCAG	2 cut(s)	789, 838
BspPI	GGATC	4 cut(s)	31, 467, 480, 757
BsrI	ACTGG	2 cut(s)	77, 655
BssECI	CCNNGG	4 cut(s)	100, 155, 232, 567
BssMI	GATC	5 cut(s)	36, 85, 472, 499, 749
BssSI	CACGAG	1 cut(s)	915
BssT1I	CCWWGG	1 cut(s)	567
Bst2BI	CACGAG	1 cut(s)	915
Bst2UI	CCWGG	1 cut(s)	157
Bst4CI	ACNGT	5 cut(s)	201, 388, 517, 778, 897
BstDEI	CTNAG	2 cut(s)	21, 932
BstF5I	GGATG	2 cut(s)	151, 772
BstFNI	CGCG	1 cut(s)	225
BstH2I	RGCGCY	1 cut(s)	985
BstHHI	GCGC	2 cut(s)	213, 984
BstKTI	GATC	5 cut(s)	39, 88, 475, 502, 752
BstMAI	GTCTC	2 cut(s)	377, 805
BstMBI	GATC	5 cut(s)	36, 85, 472, 499, 749
BstMCI	CGRYCG	1 cut(s)	680
BstMWI	GCNNNNNNNGC	4 cut(s)	96, 202, 217, 958
BstNI	CCWGG	1 cut(s)	157
BstNSI	RCATGY	1 cut(s)	125
BstSCI	CCNGG	6 cut(s)	141, 155, 231, 232, 475, 606
BstSFI	CTRYAG	4 cut(s)	197, 717, 785, 834
BstSLI	GKGCMC	1 cut(s)	186
BstUI	CGCG	1 cut(s)	225
BstV1I	GCAGC	3 cut(s)	598, 771, 991
BstV2I	GAAGAC	2 cut(s)	723, 1001
BstX2I	RGATCY	1 cut(s)	472
BstYI	RGATCY	1 cut(s)	472
BsuRI	GGCC	5 cut(s)	99, 105, 184, 366, 566
BtgZI	GCGATG	1 cut(s)	495
BtsCI	GGATG	2 cut(s)	151, 772
BtsIMutI	CAGTG	2 cut(s)	206, 393
CaiI	CAGNNNCTG	1 cut(s)	661
CfoI	GCGC	2 cut(s)	213, 984
Cfr13I	GGNCC	4 cut(s)	104, 170, 182, 183
Cfr9I	CCCGGG	1 cut(s)	232
Csp6I	GTAC	1 cut(s)	125
CviAII	CATG	3 cut(s)	122, 253, 497
CviQI	GTAC	1 cut(s)	125
DdeI	CTNAG	2 cut(s)	21, 932
DpnI	GATC	5 cut(s)	38, 87, 474, 501, 751
DpnII	GATC	5 cut(s)	36, 85, 472, 499, 749
EaeI	YGGCCR	3 cut(s)	97, 364, 564
Ecl136II	GAGCTC	2 cut(s)	936, 944
Eco130I	CCWWGG	1 cut(s)	567
Eco24I	GRGCYC	3 cut(s)	186, 938, 946
Eco47I	GGWCC	1 cut(s)	170
Eco53kI	GAGCTC	2 cut(s)	936, 944
Eco57I	CTGAAG	1 cut(s)	863
Eco88I	CYCGRG	1 cut(s)	232
EcoICRI	GAGCTC	2 cut(s)	936, 944
EcoO109I	RGGNCCY	1 cut(s)	183
EcoRI	GAATTC	2 cut(s)	60, 489
EcoRII	CCWGG	1 cut(s)	155
EcoT14I	CCWWGG	1 cut(s)	567
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	3 cut(s)	186, 938, 946
ErhI	CCWWGG	1 cut(s)	567
FaeI	CATG	3 cut(s)	125, 256, 500
FaqI	GGGAC	1 cut(s)	249
FatI	CATG	3 cut(s)	121, 252, 496
Fnu4HI	GCNGC	5 cut(s)	364, 587, 713, 785, 980
FokI	GGATG	2 cut(s)	138, 779
FriOI	GRGCYC	3 cut(s)	186, 938, 946
Fsp4HI	GCNGC	5 cut(s)	364, 587, 713, 785, 980
FspBI	CTAG	2 cut(s)	333, 939
GlaI	GCGC	2 cut(s)	212, 983
GluI	GCNGC	5 cut(s)	364, 587, 713, 785, 980
GsaI	CCCAGC	1 cut(s)	855
HaeII	RGCGCY	1 cut(s)	985
HaeIII	GGCC	5 cut(s)	99, 105, 184, 366, 566
HapII	CCGG	6 cut(s)	142, 233, 476, 563, 608, 680
HhaI	GCGC	2 cut(s)	213, 984
Hin1II	CATG	3 cut(s)	125, 256, 500
Hin6I	GCGC	2 cut(s)	211, 982
HinP1I	GCGC	2 cut(s)	211, 982
HinfI	GANTC	4 cut(s)	132, 146, 415, 685
HpaII	CCGG	6 cut(s)	142, 233, 476, 563, 608, 680
HphI	GGTGA	1 cut(s)	131
Hpy166II	GTNNAC	2 cut(s)	301, 696
Hpy188I	TCNGA	3 cut(s)	83, 118, 882
Hpy188III	TCNNGA	2 cut(s)	333, 939
Hpy8I	GTNNAC	2 cut(s)	301, 696
HpyAV	CCTTC	2 cut(s)	23, 385
HpyCH4III	ACNGT	5 cut(s)	201, 388, 517, 778, 897
HpyCH4IV	ACGT	1 cut(s)	67
HpyCH4V	TGCA	9 cut(s)	4, 315, 586, 702, 787, 823, 836, 893, 979
HpyF10VI	GCNNNNNNNGC	4 cut(s)	96, 202, 217, 958
HpyF3I	CTNAG	2 cut(s)	21, 932
HpySE526I	ACGT	1 cut(s)	67
Hsp92II	CATG	3 cut(s)	125, 256, 500
HspAI	GCGC	2 cut(s)	211, 982
Kzo9I	GATC	5 cut(s)	36, 85, 472, 499, 749
LmnI	GCTCC	3 cut(s)	225, 440, 874
Lsp1109I	GCAGC	3 cut(s)	598, 771, 991
LweI	GCATC	3 cut(s)	13, 324, 627
MaeI	CTAG	2 cut(s)	333, 939
MaeII	ACGT	1 cut(s)	67
MaeIII	GTNAC	3 cut(s)	16, 137, 772
MalI	GATC	5 cut(s)	38, 87, 474, 501, 751
MboI	GATC	5 cut(s)	36, 85, 472, 499, 749
MboII	GAAGA	5 cut(s)	382, 646, 680, 723, 1006
MflI	RGATCY	1 cut(s)	472
MhlI	GDGCHC	5 cut(s)	186, 332, 437, 938, 946
MluCI	AATT	5 cut(s)	60, 323, 336, 353, 489
MlyI	GAGTC	1 cut(s)	126
MmeI	TCCRAC	1 cut(s)	61
Mph1103I	ATGCAT	1 cut(s)	6
MseI	TTAA	6 cut(s)	402, 429, 519, 549, 576, 669
MslI	CAYNNNNRTG	1 cut(s)	707
MspA1I	CMGCKG	1 cut(s)	931
MspI	CCGG	6 cut(s)	142, 233, 476, 563, 608, 680
MspR9I	CCNGG	6 cut(s)	143, 157, 233, 234, 477, 608
Mva1269I	GAATGC	1 cut(s)	702
MvaI	CCWGG	1 cut(s)	157
MvnI	CGCG	1 cut(s)	225
MwoI	GCNNNNNNNGC	4 cut(s)	96, 202, 217, 958
NciI	CCSGG	5 cut(s)	143, 233, 234, 477, 608
NdeII	GATC	5 cut(s)	36, 85, 472, 499, 749
NlaIII	CATG	3 cut(s)	125, 256, 500
NlaIV	GGNNCC	4 cut(s)	172, 184, 474, 561
NmeAIII	GCCGAG	1 cut(s)	125
NmuCI	GTSAC	3 cut(s)	16, 137, 772
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	1 cut(s)	125
PcsI	WCGNNNNNNNCGW	1 cut(s)	508
PctI	GAATGC	1 cut(s)	702
PfeI	GAWTC	3 cut(s)	146, 415, 685
PflFI	GACNNNGTC	1 cut(s)	135
PflMI	CCANNNNNTGG	1 cut(s)	968
PkrI	GCNGC	5 cut(s)	365, 588, 714, 786, 981
PleI	GAGTC	1 cut(s)	126
PpsI	GAGTC	1 cut(s)	126
Psp124BI	GAGCTC	2 cut(s)	938, 946
Psp1406I	AACGTT	1 cut(s)	67
Psp6I	CCWGG	1 cut(s)	155
PspFI	CCCAGC	1 cut(s)	851
PspGI	CCWGG	1 cut(s)	155
PspN4I	GGNNCC	4 cut(s)	172, 184, 474, 561
PspOMI	GGGCCC	1 cut(s)	182
PspPI	GGNCC	4 cut(s)	104, 170, 182, 183
PstI	CTGCAG	2 cut(s)	789, 838
PstNI	CAGNNNCTG	1 cut(s)	661
PsuI	RGATCY	1 cut(s)	472
PsyI	GACNNNGTC	1 cut(s)	135
RsaI	GTAC	1 cut(s)	126
RsaNI	GTAC	1 cut(s)	125
RseI	CAYNNNNRTG	1 cut(s)	707
SacI	GAGCTC	2 cut(s)	938, 946
SaqAI	TTAA	6 cut(s)	402, 429, 519, 549, 576, 669
SatI	GCNGC	5 cut(s)	364, 587, 713, 785, 980
Sau3AI	GATC	5 cut(s)	36, 85, 472, 499, 749
Sau96I	GGNCC	4 cut(s)	104, 170, 182, 183
SchI	GAGTC	1 cut(s)	126
ScrFI	CCNGG	6 cut(s)	143, 157, 233, 234, 477, 608
SduI	GDGCHC	5 cut(s)	186, 332, 437, 938, 946
SetI	ASST	9 cut(s)	34, 70, 161, 724, 879, 891, 938, 946, 1006
SfaNI	GCATC	3 cut(s)	13, 324, 627
SfcI	CTRYAG	4 cut(s)	197, 717, 785, 834
SinI	GGWCC	1 cut(s)	170
SmaI	CCCGGG	1 cut(s)	234
SmiMI	CAYNNNNRTG	1 cut(s)	707
Sse9I	AATT	5 cut(s)	60, 323, 336, 353, 489
SsiI	CCGC	6 cut(s)	194, 223, 363, 572, 713, 929
SspMI	CTAG	2 cut(s)	333, 939
SstI	GAGCTC	2 cut(s)	938, 946
StyD4I	CCNGG	6 cut(s)	141, 155, 231, 232, 475, 606
StyI	CCWWGG	1 cut(s)	567
TaaI	ACNGT	5 cut(s)	201, 388, 517, 778, 897
TaiI	ACGT	1 cut(s)	70
TaqI	TCGA	5 cut(s)	35, 345, 540, 676, 817
TaqII	GACCGA	1 cut(s)	717
TasI	AATT	5 cut(s)	60, 323, 336, 353, 489
TatI	WGTACW	1 cut(s)	124
TauI	GCSGC	2 cut(s)	366, 715
TfiI	GAWTC	3 cut(s)	146, 415, 685
Tru1I	TTAA	6 cut(s)	402, 429, 519, 549, 576, 669
Tru9I	TTAA	6 cut(s)	402, 429, 519, 549, 576, 669
TscAI	CASTG	2 cut(s)	206, 393
TseFI	GTSAC	3 cut(s)	16, 137, 772
TseI	GCWGC	3 cut(s)	586, 784, 979
Tsp45I	GTSAC	3 cut(s)	16, 137, 772
TspDTI	ATGAA	2 cut(s)	241, 971
TspGWI	ACGGA	1 cut(s)	125
TspMI	CCCGGG	1 cut(s)	232
TspRI	CASTG	2 cut(s)	206, 393
Tth111I	GACNNNGTC	1 cut(s)	135
Van91I	CCANNNNNTGG	1 cut(s)	968
VpaK11BI	GGWCC	1 cut(s)	170
XapI	RAATTY	3 cut(s)	60, 336, 489
XbaI	TCTAGA	2 cut(s)	332, 938
XceI	RCATGY	1 cut(s)	125
XmaI	CCCGGG	1 cut(s)	232
XspI	CTAG	2 cut(s)	333, 939
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.