DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G60040 AT5G60040 |
| fragaria_vesca | FvH4_3g34290 FvH4_3g34290 FvH4_3g34290 FvH4_6g15631 |
| malus_domestica | MD03G1106800.v1.1 MD09G1157000.v1.1 |
| prunus_persica | Prupe.6G089600_v2.0.a1 Prupe.6G089600_v2.0.a1 |
| pyrus_communis | pycom03g08620 pycom09g07570 |
| rosa_chinensis | RchiOBHm_Chr3g0469301 RchiOBHm_Chr3g0469321 RchiOBHm_Chr5g0061861 |
| rosa_laevigata | RLG00000024360 RLG00000035511 |
| rosa_multiflora | Rmu_sc0004134.1_g000001 Rmu_sc0011641.1_g000013 Rmu_sc0011641.1_g000015 Rmu_sc0019271.1_g000001 Rmu_sc0022191.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00018870 Rroxscaffold_6G00411990 Rroxscaffold_6G00412000 |
| rosa_rugosa | Rorug03G0100400 Rorug05G0344900 Rorug05G0345000 |
| rosa_samantha | Rh3AG149800 Rh3BG173400 Rh3CG164500 Rh3DG202000 Rh5AG405500 Rh5BG418300 Rh5CG442800 Rh5DG432400 |
| rosa_wichuraiana | Rw5G038070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 4 cut(s) | 150, 539, 1667, 2178 |
| AarI | CACCTGC | 1 cut(s) | 1768 |
| Acc16I | TGCGCA | 1 cut(s) | 401 |
| Acc36I | ACCTGC | 4 cut(s) | 1768, 2906, 3341, 3370 |
| Acc65I | GGTACC | 1 cut(s) | 1973 |
| AccB1I | GGYRCC | 2 cut(s) | 1268, 1973 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 1034, 1919, 2569 |
| AccBSI | CCGCTC | 1 cut(s) | 4063 |
| AccI | GTMKAC | 2 cut(s) | 3598, 4147 |
| AciI | CCGC | 8 cut(s) | 192, 208, 257, 2039, 2246, 2574, 3968, 4063 |
| AclI | AACGTT | 1 cut(s) | 3231 |
| AclWI | GGATC | 8 cut(s) | 161, 1733, 1746, 2383, 2732, 2745, 3003, 3723 |
| AcoI | YGGCCR | 1 cut(s) | 1957 |
| AcuI | CTGAAG | 3 cut(s) | 1905, 1920, 3831 |
| AcvI | CACGTG | 1 cut(s) | 2811 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 188, 211, 212, 1034, 1613, 1919, 2569, 2903 |
| AflIII | ACRYGT | 6 cut(s) | 248, 1201, 2625, 2810, 3673, 3728 |
| AjiI | CACGTC | 1 cut(s) | 4240 |
| AjnI | CCWGG | 5 cut(s) | 274, 1264, 2233, 2943, 3175 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 38, 70 |
| AleI | CACNNNNGTG | 1 cut(s) | 1711 |
| Alw21I | GWGCWC | 6 cut(s) | 524, 1950, 2080, 2443, 2770, 3160 |
| Alw26I | GTCTC | 3 cut(s) | 2016, 2634, 3388 |
| Alw44I | GTGCAC | 1 cut(s) | 2439 |
| AlwI | GGATC | 8 cut(s) | 161, 1733, 1746, 2383, 2732, 2745, 3003, 3723 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1568 |
| Ama87I | CYCGRG | 1 cut(s) | 3077 |
| AoxI | GGCC | 7 cut(s) | 19, 214, 558, 809, 1957, 2805, 4256 |
| ApaI | GGGCCC | 1 cut(s) | 218 |
| ApaLI | GTGCAC | 1 cut(s) | 2439 |
| ApeKI | GCWGC | 7 cut(s) | 1331, 2042, 2501, 2700, 3859, 3881, 4210 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 700, 3573 |
| Asp718I | GGTACC | 1 cut(s) | 1973 |
| AspLEI | GCGC | 4 cut(s) | 104, 402, 1050, 1071 |
| AspS9I | GGNCC | 9 cut(s) | 202, 214, 215, 1250, 1305, 1895, 2656, 4226, 4256 |
| AsuHPI | GGTGA | 8 cut(s) | 34, 248, 1119, 1364, 1529, 3182, 3752, 4001 |
| AsuII | TTCGAA | 2 cut(s) | 622, 752 |
| AvaI | CYCGRG | 1 cut(s) | 3077 |
| AvaII | GGWCC | 6 cut(s) | 202, 1250, 1305, 1895, 2656, 4226 |
| AxyI | CCTNAGG | 2 cut(s) | 1978, 3579 |
| BaeGI | GKGCMC | 4 cut(s) | 218, 282, 2443, 3809 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 2586, 2619, 2973, 3006 |
| BalI | TGGCCA | 1 cut(s) | 1959 |
| BamHI | GGATCC | 2 cut(s) | 1738, 2737 |
| BanI | GGYRCC | 2 cut(s) | 1268, 1973 |
| BanII | GRGCYC | 4 cut(s) | 218, 1950, 2770, 3160 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2205, 2237 |
| BbrPI | CACGTG | 1 cut(s) | 2811 |
| BbsI | GAAGAC | 2 cut(s) | 69, 3782 |
| Bbv12I | GWGCWC | 6 cut(s) | 524, 1950, 2080, 2443, 2770, 3160 |
| BbvI | GCAGC | 7 cut(s) | 1318, 2029, 2513, 2687, 3868, 3871, 4222 |
| BceAI | ACGGC | 1 cut(s) | 545 |
| BciT130I | CCWGG | 5 cut(s) | 276, 1266, 2235, 2945, 3177 |
| BclI | TGATCA | 1 cut(s) | 2349 |
| BcoDI | GTCTC | 3 cut(s) | 2016, 2634, 3388 |
| BfaI | CTAG | 8 cut(s) | 693, 942, 1373, 1814, 2063, 2481, 2520, 3027 |
| BfmI | CTRYAG | 5 cut(s) | 798, 2499, 2547, 2913, 3474 |
| BfoI | RGCGCY | 3 cut(s) | 105, 1051, 1072 |
| BfuAI | ACCTGC | 4 cut(s) | 1768, 2906, 3341, 3370 |
| BmcAI | AGTACT | 1 cut(s) | 334 |
| Bme1390I | CCNGG | 5 cut(s) | 276, 1266, 2235, 2945, 3177 |
| Bme18I | GGWCC | 6 cut(s) | 202, 1250, 1305, 1895, 2656, 4226 |
| BmeT110I | CYCGRG | 1 cut(s) | 3077 |
| BmgBI | CACGTC | 1 cut(s) | 4240 |
| BmgT120I | GGNCC | 9 cut(s) | 202, 214, 215, 1250, 1305, 1895, 2656, 4226, 4256 |
| BmiI | GGNNCC | 8 cut(s) | 204, 216, 441, 1270, 1740, 1975, 2739, 4227 |
| BmrFI | CCNGG | 5 cut(s) | 276, 1266, 2235, 2945, 3177 |
| BmrI | ACTGGG | 2 cut(s) | 2353, 2628 |
| BmsI | GCATC | 9 cut(s) | 82, 665, 1426, 1706, 2233, 3431, 3451, 3469, 3676 |
| BmuI | ACTGGG | 2 cut(s) | 2353, 2628 |
| BpiI | GAAGAC | 2 cut(s) | 69, 3782 |
| BpmI | CTGGAG | 2 cut(s) | 2841, 3053 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1446, 2802 |
| Bpu14I | TTCGAA | 2 cut(s) | 622, 752 |
| BpuEI | CTTGAG | 4 cut(s) | 1623, 2279, 3332, 3512 |
| BsaAI | YACGTR | 1 cut(s) | 2811 |
| BsaBI | GATNNNNATC | 3 cut(s) | 171, 1427, 3421 |
| BsaI | GGTCTC | 1 cut(s) | 3388 |
| BsaJI | CCNNGG | 6 cut(s) | 275, 561, 651, 1264, 1457, 3176 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 2326, 2356, 3752, 3782 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 188, 211, 212, 1034, 1613, 1919, 2569, 2903 |
| Bse118I | RCCGGY | 1 cut(s) | 2871 |
| Bse1I | ACTGG | 7 cut(s) | 512, 1114, 2308, 2359, 2623, 2668, 4171 |
| Bse21I | CCTNAGG | 2 cut(s) | 1978, 3579 |
| Bse3DI | GCAATG | 4 cut(s) | 783, 847, 1911, 2751 |
| Bse8I | GATNNNNATC | 3 cut(s) | 171, 1427, 3421 |
| BseBI | CCWGG | 5 cut(s) | 276, 1266, 2235, 2945, 3177 |
| BseDI | CCNNGG | 6 cut(s) | 275, 561, 651, 1264, 1457, 3176 |
| BseJI | GATNNNNATC | 3 cut(s) | 171, 1427, 3421 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 188, 211, 212, 1034, 1613, 1919, 2569, 2903 |
| BseMI | GCAATG | 4 cut(s) | 783, 847, 1911, 2751 |
| BseMII | CTCAG | 6 cut(s) | 827, 1143, 1294, 2032, 2847, 3593 |
| BseNI | ACTGG | 7 cut(s) | 512, 1114, 2308, 2359, 2623, 2668, 4171 |
| BseRI | GAGGAG | 3 cut(s) | 404, 1565, 3917 |
| BseSI | GKGCMC | 4 cut(s) | 218, 282, 2443, 3809 |
| BseXI | GCAGC | 7 cut(s) | 1318, 2029, 2513, 2687, 3868, 3871, 4222 |
| BseYI | CCCAGC | 2 cut(s) | 571, 3212 |
| BsgI | GTGCAG | 2 cut(s) | 909, 3878 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2578 |
| BshFI | GGCC | 7 cut(s) | 21, 216, 560, 811, 1959, 2807, 4258 |
| BshNI | GGYRCC | 2 cut(s) | 1268, 1973 |
| BsiEI | CGRYCG | 1 cut(s) | 2578 |
| BsiHKAI | GWGCWC | 6 cut(s) | 524, 1950, 2080, 2443, 2770, 3160 |
| BsiHKCI | CYCGRG | 1 cut(s) | 3077 |
| BsiSI | CCGG | 2 cut(s) | 2872, 3005 |
| BslFI | GGGAC | 9 cut(s) | 414, 1148, 1397, 1523, 2341, 2824, 3193, 3230, 4239 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 188, 211, 212, 1034, 1613, 1919, 2569, 2903 |
| BsmAI | GTCTC | 3 cut(s) | 2016, 2634, 3388 |
| BsmFI | GGGAC | 9 cut(s) | 414, 1148, 1397, 1523, 2341, 2824, 3193, 3230, 4239 |
| BsmI | GAATGC | 3 cut(s) | 402, 1281, 2695 |
| BsnI | GGCC | 7 cut(s) | 21, 216, 560, 811, 1959, 2807, 4258 |
| Bso31I | GGTCTC | 1 cut(s) | 3388 |
| BsoBI | CYCGRG | 1 cut(s) | 3077 |
| Bsp119I | TTCGAA | 2 cut(s) | 622, 752 |
| Bsp120I | GGGCCC | 1 cut(s) | 214 |
| Bsp1286I | GDGCHC | 9 cut(s) | 218, 282, 524, 1950, 2080, 2443, 2770, 3160, 3809 |
| Bsp1407I | TGTACA | 3 cut(s) | 1042, 2122, 2142 |
| BspACI | CCGC | 8 cut(s) | 192, 208, 257, 2039, 2246, 2574, 3968, 4063 |
| BspANI | GGCC | 7 cut(s) | 21, 216, 560, 811, 1959, 2807, 4258 |
| BspCNI | CTCAG | 6 cut(s) | 828, 1144, 1293, 2031, 2848, 3592 |
| BspHI | TCATGA | 2 cut(s) | 583, 3450 |
| BspLI | GGNNCC | 8 cut(s) | 204, 216, 441, 1270, 1740, 1975, 2739, 4227 |
| BspMAI | CTGCAG | 2 cut(s) | 2503, 2917 |
| BspMI | ACCTGC | 4 cut(s) | 1768, 2906, 3341, 3370 |
| BspPI | GGATC | 8 cut(s) | 161, 1733, 1746, 2383, 2732, 2745, 3003, 3723 |
| BspT104I | TTCGAA | 2 cut(s) | 622, 752 |
| BspT107I | GGYRCC | 2 cut(s) | 1268, 1973 |
| BspTNI | GGTCTC | 1 cut(s) | 3388 |
| BsrBI | CCGCTC | 1 cut(s) | 4063 |
| BsrDI | GCAATG | 4 cut(s) | 783, 847, 1911, 2751 |
| BsrFI | RCCGGY | 1 cut(s) | 2871 |
| BsrGI | TGTACA | 3 cut(s) | 1042, 2122, 2142 |
| BsrI | ACTGG | 7 cut(s) | 512, 1114, 2308, 2359, 2623, 2668, 4171 |
| BssAI | RCCGGY | 1 cut(s) | 2871 |
| BssECI | CCNNGG | 6 cut(s) | 275, 561, 651, 1264, 1457, 3176 |
| BssNAI | GTATAC | 1 cut(s) | 4148 |
| BssT1I | CCWWGG | 2 cut(s) | 651, 1457 |
| Bst1107I | GTATAC | 1 cut(s) | 4148 |
| Bst2UI | CCWGG | 5 cut(s) | 276, 1266, 2235, 2945, 3177 |
| Bst6I | CTCTTC | 1 cut(s) | 3747 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 923 |
| BstAUI | TGTACA | 3 cut(s) | 1042, 2122, 2142 |
| BstBAI | YACGTR | 1 cut(s) | 2811 |
| BstBI | TTCGAA | 2 cut(s) | 622, 752 |
| BstC8I | GCNNGC | 6 cut(s) | 300, 1415, 1957, 2318, 3223, 4090 |
| BstDSI | CCRYGG | 1 cut(s) | 561 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 186 |
| BstH2I | RGCGCY | 3 cut(s) | 105, 1051, 1072 |
| BstHHI | GCGC | 4 cut(s) | 104, 402, 1050, 1071 |
| BstMAI | GTCTC | 3 cut(s) | 2016, 2634, 3388 |
| BstMCI | CGRYCG | 1 cut(s) | 2578 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 923, 1780, 2039, 2058, 3137, 3218, 3335, 4255 |
| BstNI | CCWGG | 5 cut(s) | 276, 1266, 2235, 2945, 3177 |
| BstNSI | RCATGY | 7 cut(s) | 252, 1538, 2320, 2629, 3542, 3732, 4092 |
| BstSCI | CCNGG | 5 cut(s) | 274, 1264, 2233, 2943, 3175 |
| BstSFI | CTRYAG | 5 cut(s) | 798, 2499, 2547, 2913, 3474 |
| BstSLI | GKGCMC | 4 cut(s) | 218, 282, 2443, 3809 |
| BstV1I | GCAGC | 7 cut(s) | 1318, 2029, 2513, 2687, 3868, 3871, 4222 |
| BstV2I | GAAGAC | 2 cut(s) | 69, 3782 |
| BstX2I | RGATCY | 4 cut(s) | 1738, 2375, 2737, 3715 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 937, 4222 |
| BstYI | RGATCY | 4 cut(s) | 1738, 2375, 2737, 3715 |
| BstZ17I | GTATAC | 1 cut(s) | 4148 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1978, 3579 |
| BsuRI | GGCC | 7 cut(s) | 21, 216, 560, 811, 1959, 2807, 4258 |
| BtgI | CCRYGG | 1 cut(s) | 561 |
| BtgZI | GCGATG | 1 cut(s) | 2133 |
| BtrI | CACGTC | 1 cut(s) | 4240 |
| BtsI | GCAGTG | 2 cut(s) | 1241, 3300 |
| BveI | ACCTGC | 4 cut(s) | 1768, 2906, 3341, 3370 |
| Cac8I | GCNNGC | 6 cut(s) | 300, 1415, 1957, 2318, 3223, 4090 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1568 |
| CciI | TCATGA | 2 cut(s) | 583, 3450 |
| CfoI | GCGC | 4 cut(s) | 104, 402, 1050, 1071 |
| Cfr10I | RCCGGY | 1 cut(s) | 2871 |
| Cfr13I | GGNCC | 9 cut(s) | 202, 214, 215, 1250, 1305, 1895, 2656, 4226, 4256 |
| CseI | GACGC | 1 cut(s) | 1228 |
| CsiI | ACCWGGT | 1 cut(s) | 2233 |
| DraI | TTTAAA | 3 cut(s) | 712, 3624, 4177 |
| EaeI | YGGCCR | 1 cut(s) | 1957 |
| Eam1104I | CTCTTC | 1 cut(s) | 3747 |
| EarI | CTCTTC | 1 cut(s) | 3747 |
| Ecl136II | GAGCTC | 3 cut(s) | 1948, 2768, 3158 |
| Eco130I | CCWWGG | 2 cut(s) | 651, 1457 |
| Eco24I | GRGCYC | 4 cut(s) | 218, 1950, 2770, 3160 |
| Eco31I | GGTCTC | 1 cut(s) | 3388 |
| Eco32I | GATATC | 1 cut(s) | 3556 |
| Eco47I | GGWCC | 6 cut(s) | 202, 1250, 1305, 1895, 2656, 4226 |
| Eco53kI | GAGCTC | 3 cut(s) | 1948, 2768, 3158 |
| Eco57I | CTGAAG | 3 cut(s) | 1905, 1920, 3831 |
| Eco72I | CACGTG | 1 cut(s) | 2811 |
| Eco81I | CCTNAGG | 2 cut(s) | 1978, 3579 |
| Eco88I | CYCGRG | 1 cut(s) | 3077 |
| EcoICRI | GAGCTC | 3 cut(s) | 1948, 2768, 3158 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 186 |
| EcoO109I | RGGNCCY | 3 cut(s) | 215, 1895, 2656 |
| EcoRI | GAATTC | 1 cut(s) | 2939 |
| EcoRII | CCWGG | 5 cut(s) | 274, 1264, 2233, 2943, 3175 |
| EcoRV | GATATC | 1 cut(s) | 3556 |
| EcoT14I | CCWWGG | 2 cut(s) | 651, 1457 |
| EcoT22I | ATGCAT | 2 cut(s) | 1536, 4090 |
| EcoT38I | GRGCYC | 4 cut(s) | 218, 1950, 2770, 3160 |
| ErhI | CCWWGG | 2 cut(s) | 651, 1457 |
| FaqI | GGGAC | 9 cut(s) | 414, 1148, 1397, 1523, 2341, 2824, 3193, 3230, 4239 |
| FauI | CCCGC | 1 cut(s) | 215 |
| FauNDI | CATATG | 2 cut(s) | 678, 3954 |
| FbaI | TGATCA | 1 cut(s) | 2349 |
| FblI | GTMKAC | 2 cut(s) | 3598, 4147 |
| FriOI | GRGCYC | 4 cut(s) | 218, 1950, 2770, 3160 |
| FspBI | CTAG | 8 cut(s) | 693, 942, 1373, 1814, 2063, 2481, 2520, 3027 |
| FspI | TGCGCA | 1 cut(s) | 401 |
| GlaI | GCGC | 4 cut(s) | 103, 401, 1049, 1070 |
| GsaI | CCCAGC | 2 cut(s) | 575, 3216 |
| GsuI | CTGGAG | 2 cut(s) | 2841, 3053 |
| HaeII | RGCGCY | 3 cut(s) | 105, 1051, 1072 |
| HaeIII | GGCC | 7 cut(s) | 21, 216, 560, 811, 1959, 2807, 4258 |
| HapII | CCGG | 2 cut(s) | 2872, 3005 |
| HgaI | GACGC | 1 cut(s) | 1228 |
| HhaI | GCGC | 4 cut(s) | 104, 402, 1050, 1071 |
| Hin6I | GCGC | 4 cut(s) | 102, 400, 1048, 1069 |
| HinP1I | GCGC | 4 cut(s) | 102, 400, 1048, 1069 |
| HincII | GTYRAC | 4 cut(s) | 1318, 1747, 2417, 4108 |
| HindII | GTYRAC | 4 cut(s) | 1318, 1747, 2417, 4108 |
| HindIII | AAGCTT | 2 cut(s) | 1411, 2833 |
| HpaI | GTTAAC | 1 cut(s) | 1318 |
| HpaII | CCGG | 2 cut(s) | 2872, 3005 |
| HphI | GGTGA | 8 cut(s) | 34, 248, 1119, 1364, 1529, 3182, 3752, 4001 |
| Hpy99I | CGWCG | 2 cut(s) | 2439, 2787 |
| HpyCH4IV | ACGT | 8 cut(s) | 1201, 1366, 2810, 3231, 3673, 3696, 3980, 4239 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 923, 1780, 2039, 2058, 3137, 3218, 3335, 4255 |
| HpySE526I | ACGT | 8 cut(s) | 1201, 1366, 2810, 3231, 3673, 3696, 3980, 4239 |
| HspAI | GCGC | 4 cut(s) | 102, 400, 1048, 1069 |
| KpnI | GGTACC | 1 cut(s) | 1977 |
| Ksp22I | TGATCA | 1 cut(s) | 2349 |
| KspAI | GTTAAC | 1 cut(s) | 1318 |
| LmnI | GCTCC | 7 cut(s) | 439, 527, 2765, 2773, 3155, 3272, 3639 |
| Lsp1109I | GCAGC | 7 cut(s) | 1318, 2029, 2513, 2687, 3868, 3871, 4222 |
| LweI | GCATC | 9 cut(s) | 82, 665, 1426, 1706, 2233, 3431, 3451, 3469, 3676 |
| MabI | ACCWGGT | 1 cut(s) | 2233 |
| MaeI | CTAG | 8 cut(s) | 693, 942, 1373, 1814, 2063, 2481, 2520, 3027 |
| MaeII | ACGT | 8 cut(s) | 1201, 1366, 2810, 3231, 3673, 3696, 3980, 4239 |
| MaeIII | GTNAC | 8 cut(s) | 986, 1352, 1937, 2132, 3061, 3232, 3298, 3724 |
| MbiI | CCGCTC | 1 cut(s) | 4063 |
| MfeI | CAATTG | 1 cut(s) | 2106 |
| MflI | RGATCY | 4 cut(s) | 1738, 2375, 2737, 3715 |
| MhlI | GDGCHC | 9 cut(s) | 218, 282, 524, 1950, 2080, 2443, 2770, 3160, 3809 |
| MlsI | TGGCCA | 1 cut(s) | 1959 |
| MluNI | TGGCCA | 1 cut(s) | 1959 |
| MlyI | GAGTC | 8 cut(s) | 656, 1170, 1335, 1848, 2270, 2887, 3252, 3594 |
| MmeI | TCCRAC | 5 cut(s) | 135, 301, 1138, 2973, 3335 |
| Mox20I | TGGCCA | 1 cut(s) | 1959 |
| Mph1103I | ATGCAT | 2 cut(s) | 1536, 4090 |
| MroXI | GAANNNNTTC | 2 cut(s) | 700, 3573 |
| MscI | TGGCCA | 1 cut(s) | 1959 |
| MslI | CAYNNNNRTG | 4 cut(s) | 788, 931, 1711, 4139 |
| Msp20I | TGGCCA | 1 cut(s) | 1959 |
| MspA1I | CMGCKG | 2 cut(s) | 2600, 2612 |
| MspI | CCGG | 2 cut(s) | 2872, 3005 |
| MspR9I | CCNGG | 5 cut(s) | 276, 1266, 2235, 2945, 3177 |
| MunI | CAATTG | 1 cut(s) | 2106 |
| Mva1269I | GAATGC | 3 cut(s) | 402, 1281, 2695 |
| MvaI | CCWGG | 5 cut(s) | 276, 1266, 2235, 2945, 3177 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 923, 1780, 2039, 2058, 3137, 3218, 3335, 4255 |
| NdeI | CATATG | 2 cut(s) | 678, 3954 |
| NlaIV | GGNNCC | 8 cut(s) | 204, 216, 441, 1270, 1740, 1975, 2739, 4227 |
| NmuCI | GTSAC | 4 cut(s) | 986, 1352, 2132, 3298 |
| NsbI | TGCGCA | 1 cut(s) | 401 |
| NsiI | ATGCAT | 2 cut(s) | 1536, 4090 |
| NspI | RCATGY | 7 cut(s) | 252, 1538, 2320, 2629, 3542, 3732, 4092 |
| NspV | TTCGAA | 2 cut(s) | 622, 752 |
| OliI | CACNNNNGTG | 1 cut(s) | 1711 |
| PaeI | GCATGC | 2 cut(s) | 2320, 4092 |
| PaeR7I | CTCGAG | 1 cut(s) | 3077 |
| PagI | TCATGA | 2 cut(s) | 583, 3450 |
| PaqCI | CACCTGC | 1 cut(s) | 1768 |
| PciI | ACATGT | 3 cut(s) | 248, 2625, 3728 |
| PctI | GAATGC | 3 cut(s) | 402, 1281, 2695 |
| PdmI | GAANNNNTTC | 2 cut(s) | 700, 3573 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 1034, 1919, 2569 |
| PfoI | TCCNGGA | 1 cut(s) | 2943 |
| PleI | GAGTC | 8 cut(s) | 655, 1169, 1335, 1847, 2269, 2887, 3251, 3594 |
| PmaCI | CACGTG | 1 cut(s) | 2811 |
| PmlI | CACGTG | 1 cut(s) | 2811 |
| PpsI | GAGTC | 8 cut(s) | 655, 1169, 1335, 1847, 2269, 2887, 3251, 3594 |
| Ppu21I | YACGTR | 1 cut(s) | 2811 |
| PpuMI | RGGWCCY | 2 cut(s) | 1895, 2656 |
| PscI | ACATGT | 3 cut(s) | 248, 2625, 3728 |
| PsiI | TTATAA | 4 cut(s) | 150, 539, 1667, 2178 |
| Psp124BI | GAGCTC | 3 cut(s) | 1950, 2770, 3160 |
| Psp1406I | AACGTT | 1 cut(s) | 3231 |
| Psp5II | RGGWCCY | 2 cut(s) | 1895, 2656 |
| Psp6I | CCWGG | 5 cut(s) | 274, 1264, 2233, 2943, 3175 |
| PspCI | CACGTG | 1 cut(s) | 2811 |
| PspFI | CCCAGC | 2 cut(s) | 571, 3212 |
| PspGI | CCWGG | 5 cut(s) | 274, 1264, 2233, 2943, 3175 |
| PspN4I | GGNNCC | 8 cut(s) | 204, 216, 441, 1270, 1740, 1975, 2739, 4227 |
| PspOMI | GGGCCC | 1 cut(s) | 214 |
| PspPI | GGNCC | 9 cut(s) | 202, 214, 215, 1250, 1305, 1895, 2656, 4226, 4256 |
| PspPPI | RGGWCCY | 2 cut(s) | 1895, 2656 |
| PspXI | VCTCGAGB | 1 cut(s) | 3077 |
| PstI | CTGCAG | 2 cut(s) | 2503, 2917 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1568 |
| PsuI | RGATCY | 4 cut(s) | 1738, 2375, 2737, 3715 |
| PvuII | CAGCTG | 2 cut(s) | 2600, 2612 |
| RseI | CAYNNNNRTG | 4 cut(s) | 788, 931, 1711, 4139 |
| SacI | GAGCTC | 3 cut(s) | 1950, 2770, 3160 |
| Sau96I | GGNCC | 9 cut(s) | 202, 214, 215, 1250, 1305, 1895, 2656, 4226, 4256 |
| ScaI | AGTACT | 1 cut(s) | 334 |
| SchI | GAGTC | 8 cut(s) | 656, 1170, 1335, 1848, 2270, 2887, 3252, 3594 |
| ScrFI | CCNGG | 5 cut(s) | 276, 1266, 2235, 2945, 3177 |
| SduI | GDGCHC | 9 cut(s) | 218, 282, 524, 1950, 2080, 2443, 2770, 3160, 3809 |
| SexAI | ACCWGGT | 1 cut(s) | 2233 |
| SfaNI | GCATC | 9 cut(s) | 82, 665, 1426, 1706, 2233, 3431, 3451, 3469, 3676 |
| SfcI | CTRYAG | 5 cut(s) | 798, 2499, 2547, 2913, 3474 |
| Sfr274I | CTCGAG | 1 cut(s) | 3077 |
| SfuI | TTCGAA | 2 cut(s) | 622, 752 |
| SinI | GGWCC | 6 cut(s) | 202, 1250, 1305, 1895, 2656, 4226 |
| SlaI | CTCGAG | 1 cut(s) | 3077 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 788, 931, 1711, 4139 |
| SmlI | CTYRAG | 5 cut(s) | 1638, 2258, 3077, 3311, 3527 |
| SmoI | CTYRAG | 5 cut(s) | 1638, 2258, 3077, 3311, 3527 |
| SphI | GCATGC | 2 cut(s) | 2320, 4092 |
| SsiI | CCGC | 8 cut(s) | 192, 208, 257, 2039, 2246, 2574, 3968, 4063 |
| SspI | AATATT | 6 cut(s) | 1219, 2280, 2290, 2389, 3052, 4173 |
| SspMI | CTAG | 8 cut(s) | 693, 942, 1373, 1814, 2063, 2481, 2520, 3027 |
| SstI | GAGCTC | 3 cut(s) | 1950, 2770, 3160 |
| StyD4I | CCNGG | 5 cut(s) | 274, 1264, 2233, 2943, 3175 |
| StyI | CCWWGG | 2 cut(s) | 651, 1457 |
| TaiI | ACGT | 8 cut(s) | 1204, 1369, 2813, 3234, 3676, 3699, 3983, 4242 |
| TatI | WGTACW | 7 cut(s) | 332, 1042, 2011, 2122, 2142, 3287, 3762 |
| TauI | GCSGC | 3 cut(s) | 195, 2042, 2249 |
| TseFI | GTSAC | 4 cut(s) | 986, 1352, 2132, 3298 |
| TseI | GCWGC | 7 cut(s) | 1331, 2042, 2501, 2700, 3859, 3881, 4210 |
| Tsp45I | GTSAC | 4 cut(s) | 986, 1352, 2132, 3298 |
| TspGWI | ACGGA | 6 cut(s) | 131, 1353, 1751, 2112, 2701, 3285 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 1034, 1919, 2569 |
| VneI | GTGCAC | 1 cut(s) | 2439 |
| VpaK11BI | GGWCC | 6 cut(s) | 202, 1250, 1305, 1895, 2656, 4226 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 186 |
| XbaI | TCTAGA | 1 cut(s) | 1372 |
| XceI | RCATGY | 7 cut(s) | 252, 1538, 2320, 2629, 3542, 3732, 4092 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1782, 3053 |
| XhoI | CTCGAG | 1 cut(s) | 3077 |
| XmiI | GTMKAC | 2 cut(s) | 3598, 4147 |
| XmnI | GAANNNNTTC | 2 cut(s) | 700, 3573 |
| XspI | CTAG | 8 cut(s) | 693, 942, 1373, 1814, 2063, 2481, 2520, 3027 |
| ZrmI | AGTACT | 1 cut(s) | 334 |
| Zsp2I | ATGCAT | 2 cut(s) | 1536, 4090 |