Long chain base biosynthesis protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g01910 |
| malus_domestica | MD02G1254800.v1.1 |
| rosa_chinensis | RchiOBHm_Chr4g0385711 RchiOBHm_Chr4g0392541 RchiOBHm_Chr7g0217771 RchiOBHm_Chr7g0217781 RchiOBHm_Chr7g0225391 |
| rosa_laevigata | RLG00000009613 RLG00000015392 RLG00000030410 RLG00000036877 |
| rosa_multiflora | Rmu_sc0001863.1_g000004 Rmu_sc0006711.1_g000026 Rmu_sc0011203.1_g000021 |
| rosa_roxburghii | Rroxscaffold_7G00203840 |
| rosa_samantha | Rh4AG311200 Rh4BG318300 Rh4CG333600 Rh5BG392500 Rh6CG013300 Rh6DG014500 Rh7AG312400 |
| rosa_wichuraiana | Rw0G020880 Rw7G026460 Rw7G028190 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 259 |
| AcsI | RAATTY | 2 cut(s) | 253, 377 |
| AcuI | CTGAAG | 1 cut(s) | 63 |
| AgsI | TTSAA | 3 cut(s) | 239, 295, 398 |
| AluBI | AGCT | 1 cut(s) | 242 |
| AluI | AGCT | 1 cut(s) | 242 |
| Alw26I | GTCTC | 1 cut(s) | 374 |
| AoxI | GGCC | 1 cut(s) | 259 |
| ApeKI | GCWGC | 2 cut(s) | 419, 440 |
| ApoI | RAATTY | 2 cut(s) | 253, 377 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 13 |
| AspLEI | GCGC | 1 cut(s) | 225 |
| AsuHPI | GGTGA | 1 cut(s) | 472 |
| BalI | TGGCCA | 1 cut(s) | 261 |
| BbvI | GCAGC | 2 cut(s) | 406, 452 |
| BclI | TGATCA | 1 cut(s) | 477 |
| BcoDI | GTCTC | 1 cut(s) | 374 |
| BfaI | CTAG | 2 cut(s) | 123, 467 |
| BfoI | RGCGCY | 1 cut(s) | 226 |
| BisI | GCNGC | 2 cut(s) | 420, 441 |
| BlsI | GCNGC | 2 cut(s) | 421, 442 |
| BmiI | GGNNCC | 1 cut(s) | 16 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 320, 352 |
| Bpu10I | CCTNAGC | 1 cut(s) | 436 |
| BpuEI | CTTGAG | 1 cut(s) | 200 |
| BsaI | GGTCTC | 1 cut(s) | 374 |
| BsaWI | WCCGGW | 1 cut(s) | 64 |
| Bse1I | ACTGG | 1 cut(s) | 150 |
| Bse3DI | GCAATG | 1 cut(s) | 429 |
| BseGI | GGATG | 1 cut(s) | 85 |
| BseMI | GCAATG | 1 cut(s) | 429 |
| BseNI | ACTGG | 1 cut(s) | 150 |
| BseXI | GCAGC | 2 cut(s) | 406, 452 |
| BshFI | GGCC | 1 cut(s) | 261 |
| BsiSI | CCGG | 2 cut(s) | 65, 360 |
| BslFI | GGGAC | 1 cut(s) | 441 |
| BsmAI | GTCTC | 1 cut(s) | 374 |
| BsmFI | GGGAC | 1 cut(s) | 441 |
| BsnI | GGCC | 1 cut(s) | 261 |
| Bso31I | GGTCTC | 1 cut(s) | 374 |
| Bsp143I | GATC | 1 cut(s) | 477 |
| BspANI | GGCC | 1 cut(s) | 261 |
| BspLI | GGNNCC | 1 cut(s) | 16 |
| BspTNI | GGTCTC | 1 cut(s) | 374 |
| BsrDI | GCAATG | 1 cut(s) | 429 |
| BsrI | ACTGG | 1 cut(s) | 150 |
| BssMI | GATC | 1 cut(s) | 477 |
| Bst4CI | ACNGT | 1 cut(s) | 193 |
| BstC8I | GCNNGC | 2 cut(s) | 203, 207 |
| BstDEI | CTNAG | 2 cut(s) | 210, 436 |
| BstF5I | GGATG | 1 cut(s) | 85 |
| BstH2I | RGCGCY | 1 cut(s) | 226 |
| BstHHI | GCGC | 1 cut(s) | 225 |
| BstKTI | GATC | 1 cut(s) | 480 |
| BstMAI | GTCTC | 1 cut(s) | 374 |
| BstMBI | GATC | 1 cut(s) | 477 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 440 |
| BstNSI | RCATGY | 1 cut(s) | 434 |
| BstV1I | GCAGC | 2 cut(s) | 406, 452 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 157, 257 |
| BsuRI | GGCC | 1 cut(s) | 261 |
| BtsCI | GGATG | 1 cut(s) | 85 |
| BtsIMutI | CAGTG | 4 cut(s) | 39, 157, 189, 372 |
| Cac8I | GCNNGC | 2 cut(s) | 203, 207 |
| CfoI | GCGC | 1 cut(s) | 225 |
| CviAII | CATG | 3 cut(s) | 157, 168, 431 |
| CviJI | RGCY | 4 cut(s) | 242, 261, 269, 359 |
| CviKI_1 | RGCY | 4 cut(s) | 242, 261, 269, 359 |
| DdeI | CTNAG | 2 cut(s) | 210, 436 |
| DpnI | GATC | 1 cut(s) | 479 |
| DpnII | GATC | 1 cut(s) | 477 |
| EaeI | YGGCCR | 1 cut(s) | 259 |
| Eco31I | GGTCTC | 1 cut(s) | 374 |
| Eco57I | CTGAAG | 1 cut(s) | 63 |
| EcoRI | GAATTC | 1 cut(s) | 253 |
| FaeI | CATG | 3 cut(s) | 160, 171, 434 |
| FaiI | YATR | 8 cut(s) | 50, 57, 139, 158, 169, 306, 384, 432 |
| FaqI | GGGAC | 1 cut(s) | 441 |
| FatI | CATG | 3 cut(s) | 156, 167, 430 |
| FbaI | TGATCA | 1 cut(s) | 477 |
| Fnu4HI | GCNGC | 2 cut(s) | 420, 441 |
| FokI | GGATG | 1 cut(s) | 92 |
| Fsp4HI | GCNGC | 2 cut(s) | 420, 441 |
| FspBI | CTAG | 2 cut(s) | 123, 467 |
| GlaI | GCGC | 1 cut(s) | 224 |
| GluI | GCNGC | 2 cut(s) | 420, 441 |
| HaeII | RGCGCY | 1 cut(s) | 226 |
| HaeIII | GGCC | 1 cut(s) | 261 |
| HapII | CCGG | 2 cut(s) | 65, 360 |
| HhaI | GCGC | 1 cut(s) | 225 |
| Hin1II | CATG | 3 cut(s) | 160, 171, 434 |
| Hin6I | GCGC | 1 cut(s) | 223 |
| HinP1I | GCGC | 1 cut(s) | 223 |
| HinfI | GANTC | 6 cut(s) | 59, 161, 186, 214, 453, 470 |
| HpaII | CCGG | 2 cut(s) | 65, 360 |
| HphI | GGTGA | 1 cut(s) | 472 |
| Hpy166II | GTNNAC | 1 cut(s) | 247 |
| Hpy188III | TCNNGA | 3 cut(s) | 123, 179, 196 |
| Hpy8I | GTNNAC | 1 cut(s) | 247 |
| HpyAV | CCTTC | 5 cut(s) | 34, 68, 77, 289, 440 |
| HpyCH4III | ACNGT | 1 cut(s) | 193 |
| HpyCH4V | TGCA | 3 cut(s) | 52, 91, 422 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 440 |
| HpyF3I | CTNAG | 2 cut(s) | 210, 436 |
| Hsp92II | CATG | 3 cut(s) | 160, 171, 434 |
| HspAI | GCGC | 1 cut(s) | 223 |
| Ksp22I | TGATCA | 1 cut(s) | 477 |
| Kzo9I | GATC | 1 cut(s) | 477 |
| LpnPI | CCDG | 7 cut(s) | 78, 163, 205, 243, 263, 373, 377 |
| Lsp1109I | GCAGC | 2 cut(s) | 406, 452 |
| MaeI | CTAG | 2 cut(s) | 123, 467 |
| MaeIII | GTNAC | 1 cut(s) | 152 |
| MalI | GATC | 1 cut(s) | 479 |
| MboI | GATC | 1 cut(s) | 477 |
| MboII | GAAGA | 1 cut(s) | 56 |
| MfeI | CAATTG | 1 cut(s) | 132 |
| MlsI | TGGCCA | 1 cut(s) | 261 |
| MluCI | AATT | 5 cut(s) | 132, 253, 282, 290, 377 |
| MluNI | TGGCCA | 1 cut(s) | 261 |
| MlyI | GAGTC | 1 cut(s) | 479 |
| MmeI | TCCRAC | 1 cut(s) | 51 |
| MnlI | CCTC | 4 cut(s) | 42, 284, 359, 443 |
| Mox20I | TGGCCA | 1 cut(s) | 261 |
| MroXI | GAANNNNTTC | 1 cut(s) | 13 |
| MscI | TGGCCA | 1 cut(s) | 261 |
| MseI | TTAA | 3 cut(s) | 20, 144, 288 |
| Msp20I | TGGCCA | 1 cut(s) | 261 |
| MspI | CCGG | 2 cut(s) | 65, 360 |
| MunI | CAATTG | 1 cut(s) | 132 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 440 |
| NdeII | GATC | 1 cut(s) | 477 |
| NlaIII | CATG | 3 cut(s) | 160, 171, 434 |
| NlaIV | GGNNCC | 1 cut(s) | 16 |
| NmuCI | GTSAC | 1 cut(s) | 152 |
| NspI | RCATGY | 1 cut(s) | 434 |
| PdmI | GAANNNNTTC | 1 cut(s) | 13 |
| PfeI | GAWTC | 5 cut(s) | 59, 161, 186, 214, 453 |
| PflFI | GACNNNGTC | 1 cut(s) | 366 |
| PkrI | GCNGC | 2 cut(s) | 421, 442 |
| PleI | GAGTC | 1 cut(s) | 478 |
| PpsI | GAGTC | 1 cut(s) | 478 |
| PspN4I | GGNNCC | 1 cut(s) | 16 |
| PsyI | GACNNNGTC | 1 cut(s) | 366 |
| SaqAI | TTAA | 3 cut(s) | 20, 144, 288 |
| SatI | GCNGC | 2 cut(s) | 420, 441 |
| Sau3AI | GATC | 1 cut(s) | 477 |
| SchI | GAGTC | 1 cut(s) | 479 |
| SetI | ASST | 4 cut(s) | 26, 244, 311, 370 |
| SmlI | CTYRAG | 1 cut(s) | 179 |
| SmoI | CTYRAG | 1 cut(s) | 179 |
| Sse9I | AATT | 5 cut(s) | 132, 253, 282, 290, 377 |
| SspMI | CTAG | 2 cut(s) | 123, 467 |
| TaaI | ACNGT | 1 cut(s) | 193 |
| TasI | AATT | 5 cut(s) | 132, 253, 282, 290, 377 |
| TfiI | GAWTC | 5 cut(s) | 59, 161, 186, 214, 453 |
| Tru1I | TTAA | 3 cut(s) | 20, 144, 288 |
| Tru9I | TTAA | 3 cut(s) | 20, 144, 288 |
| TscAI | CASTG | 4 cut(s) | 46, 157, 196, 379 |
| TseFI | GTSAC | 1 cut(s) | 152 |
| TseI | GCWGC | 2 cut(s) | 419, 440 |
| Tsp45I | GTSAC | 1 cut(s) | 152 |
| TspDTI | ATGAA | 5 cut(s) | 16, 72, 96, 153, 294 |
| TspRI | CASTG | 4 cut(s) | 46, 157, 196, 379 |
| Tth111I | GACNNNGTC | 1 cut(s) | 366 |
| XapI | RAATTY | 2 cut(s) | 253, 377 |
| XbaI | TCTAGA | 1 cut(s) | 122 |
| XceI | RCATGY | 1 cut(s) | 434 |
| XmnI | GAANNNNTTC | 1 cut(s) | 13 |
| XspI | CTAG | 2 cut(s) | 123, 467 |