Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g01910 |
| malus_domestica | MD02G1254800.v1.1 |
| rosa_chinensis | RchiOBHm_Chr4g0385711 RchiOBHm_Chr4g0392541 RchiOBHm_Chr7g0217771 RchiOBHm_Chr7g0217781 RchiOBHm_Chr7g0225391 |
| rosa_laevigata | RLG00000009613 RLG00000015392 RLG00000030410 RLG00000036877 |
| rosa_multiflora | Rmu_sc0001863.1_g000004 Rmu_sc0006711.1_g000026 Rmu_sc0011203.1_g000021 |
| rosa_roxburghii | Rroxscaffold_7G00203840 |
| rosa_samantha | Rh4AG311200 Rh4BG318300 Rh4CG333600 Rh5BG392500 Rh6CG013300 Rh6DG014500 Rh7AG312400 |
| rosa_wichuraiana | Rw0G020880 Rw7G026460 Rw7G028190 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 64 |
| AcsI | RAATTY | 1 cut(s) | 105 |
| AhlI | ACTAGT | 1 cut(s) | 227 |
| AjnI | CCWGG | 1 cut(s) | 73 |
| AluBI | AGCT | 1 cut(s) | 94 |
| AluI | AGCT | 1 cut(s) | 94 |
| Alw21I | GWGCWC | 1 cut(s) | 83 |
| AlwI | GGATC | 1 cut(s) | 64 |
| ApoI | RAATTY | 1 cut(s) | 105 |
| Bbv12I | GWGCWC | 1 cut(s) | 83 |
| BccI | CCATC | 2 cut(s) | 34, 41 |
| BciT130I | CCWGG | 1 cut(s) | 75 |
| BcuI | ACTAGT | 1 cut(s) | 227 |
| BfaI | CTAG | 2 cut(s) | 95, 228 |
| BfmI | CTRYAG | 1 cut(s) | 30 |
| Bme1390I | CCNGG | 1 cut(s) | 75 |
| BmrFI | CCNGG | 1 cut(s) | 75 |
| BsaJI | CCNNGG | 2 cut(s) | 73, 74 |
| BseBI | CCWGG | 1 cut(s) | 75 |
| BseDI | CCNNGG | 2 cut(s) | 73, 74 |
| BseGI | GGATG | 1 cut(s) | 67 |
| BseRI | GAGGAG | 1 cut(s) | 205 |
| BsiHKAI | GWGCWC | 1 cut(s) | 83 |
| Bsp1286I | GDGCHC | 1 cut(s) | 83 |
| Bsp143I | GATC | 2 cut(s) | 69, 220 |
| BspPI | GGATC | 1 cut(s) | 64 |
| BssECI | CCNNGG | 2 cut(s) | 73, 74 |
| BssMI | GATC | 2 cut(s) | 69, 220 |
| Bst2UI | CCWGG | 1 cut(s) | 75 |
| Bst4CI | ACNGT | 1 cut(s) | 144 |
| BstF5I | GGATG | 1 cut(s) | 67 |
| BstKTI | GATC | 2 cut(s) | 72, 223 |
| BstMBI | GATC | 2 cut(s) | 69, 220 |
| BstNI | CCWGG | 1 cut(s) | 75 |
| BstSCI | CCNGG | 1 cut(s) | 73 |
| BstSFI | CTRYAG | 1 cut(s) | 30 |
| BstX2I | RGATCY | 1 cut(s) | 69 |
| BstYI | RGATCY | 1 cut(s) | 69 |
| BtgZI | GCGATG | 1 cut(s) | 53 |
| BtsCI | GGATG | 1 cut(s) | 67 |
| CviJI | RGCY | 2 cut(s) | 94, 197 |
| CviKI_1 | RGCY | 2 cut(s) | 94, 197 |
| DpnI | GATC | 2 cut(s) | 71, 222 |
| DpnII | GATC | 2 cut(s) | 69, 220 |
| EcoRII | CCWGG | 1 cut(s) | 73 |
| FaiI | YATR | 4 cut(s) | 138, 159, 204, 262 |
| FokI | GGATG | 1 cut(s) | 74 |
| FspBI | CTAG | 2 cut(s) | 95, 228 |
| Hpy188I | TCNGA | 1 cut(s) | 220 |
| Hpy188III | TCNNGA | 3 cut(s) | 233, 266, 276 |
| HpyCH4III | ACNGT | 1 cut(s) | 144 |
| Kzo9I | GATC | 2 cut(s) | 69, 220 |
| LmnI | GCTCC | 1 cut(s) | 78 |
| LpnPI | CCDG | 5 cut(s) | 60, 87, 108, 183, 218 |
| MaeI | CTAG | 2 cut(s) | 95, 228 |
| MalI | GATC | 2 cut(s) | 71, 222 |
| MboI | GATC | 2 cut(s) | 69, 220 |
| MboII | GAAGA | 2 cut(s) | 28, 196 |
| MflI | RGATCY | 1 cut(s) | 69 |
| MhlI | GDGCHC | 1 cut(s) | 83 |
| MluCI | AATT | 1 cut(s) | 105 |
| MnlI | CCTC | 4 cut(s) | 28, 174, 183, 186 |
| MspR9I | CCNGG | 1 cut(s) | 75 |
| MvaI | CCWGG | 1 cut(s) | 75 |
| NdeII | GATC | 2 cut(s) | 69, 220 |
| PasI | CCCWGGG | 1 cut(s) | 74 |
| Psp6I | CCWGG | 1 cut(s) | 73 |
| PspGI | CCWGG | 1 cut(s) | 73 |
| PsuI | RGATCY | 1 cut(s) | 69 |
| Sau3AI | GATC | 2 cut(s) | 69, 220 |
| ScrFI | CCNGG | 1 cut(s) | 75 |
| SduI | GDGCHC | 1 cut(s) | 83 |
| SetI | ASST | 1 cut(s) | 96 |
| SfcI | CTRYAG | 1 cut(s) | 30 |
| SgeI | CNNG | 9 cut(s) | 37, 65, 86, 87, 107, 135, 210, 240, 245 |
| SpeI | ACTAGT | 1 cut(s) | 227 |
| Sse9I | AATT | 1 cut(s) | 105 |
| SspMI | CTAG | 2 cut(s) | 95, 228 |
| StyD4I | CCNGG | 1 cut(s) | 73 |
| TaaI | ACNGT | 1 cut(s) | 144 |
| TasI | AATT | 1 cut(s) | 105 |
| TspDTI | ATGAA | 5 cut(s) | 17, 78, 117, 174, 186 |
| TspGWI | ACGGA | 1 cut(s) | 126 |
| XapI | RAATTY | 1 cut(s) | 105 |
| XspI | CTAG | 2 cut(s) | 95, 228 |