Long chain base biosynthesis protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g01910 |
| malus_domestica | MD02G1254800.v1.1 |
| rosa_chinensis | RchiOBHm_Chr4g0385711 RchiOBHm_Chr4g0392541 RchiOBHm_Chr7g0217771 RchiOBHm_Chr7g0217781 RchiOBHm_Chr7g0225391 |
| rosa_laevigata | RLG00000009613 RLG00000015392 RLG00000030410 RLG00000036877 |
| rosa_multiflora | Rmu_sc0001863.1_g000004 Rmu_sc0006711.1_g000026 Rmu_sc0011203.1_g000021 |
| rosa_roxburghii | Rroxscaffold_7G00203840 |
| rosa_samantha | Rh4AG311200 Rh4BG318300 Rh4CG333600 Rh5BG392500 Rh6CG013300 Rh6DG014500 Rh7AG312400 |
| rosa_wichuraiana | Rw0G020880 Rw7G026460 Rw7G028190 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 8 |
| AciI | CCGC | 2 cut(s) | 8, 376 |
| AcuI | CTGAAG | 1 cut(s) | 386 |
| AcyI | GRCGYC | 1 cut(s) | 23 |
| AfaI | GTAC | 1 cut(s) | 419 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 241, 445 |
| AgsI | TTSAA | 3 cut(s) | 52, 316, 410 |
| AleI | CACNNNNGTG | 1 cut(s) | 305 |
| AluBI | AGCT | 4 cut(s) | 70, 79, 396, 413 |
| AluI | AGCT | 4 cut(s) | 70, 79, 396, 413 |
| Alw21I | GWGCWC | 2 cut(s) | 72, 81 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 183 |
| BanII | GRGCYC | 2 cut(s) | 72, 81 |
| BbsI | GAAGAC | 1 cut(s) | 275 |
| Bbv12I | GWGCWC | 2 cut(s) | 72, 81 |
| BccI | CCATC | 2 cut(s) | 141, 215 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 6, 40 |
| BfaI | CTAG | 1 cut(s) | 294 |
| BfmI | CTRYAG | 1 cut(s) | 124 |
| BglII | AGATCT | 1 cut(s) | 60 |
| BmiI | GGNNCC | 1 cut(s) | 186 |
| BpiI | GAAGAC | 1 cut(s) | 275 |
| BpmI | CTGGAG | 1 cut(s) | 371 |
| BsaHI | GRCGYC | 1 cut(s) | 23 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 241, 445 |
| Bse1I | ACTGG | 1 cut(s) | 421 |
| BseGI | GGATG | 2 cut(s) | 256, 449 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 241, 445 |
| BseMII | CTCAG | 1 cut(s) | 78 |
| BseNI | ACTGG | 1 cut(s) | 421 |
| BsiHKAI | GWGCWC | 2 cut(s) | 72, 81 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 241, 445 |
| Bsp1286I | GDGCHC | 2 cut(s) | 72, 81 |
| Bsp143I | GATC | 3 cut(s) | 39, 60, 166 |
| BspACI | CCGC | 2 cut(s) | 8, 376 |
| BspCNI | CTCAG | 1 cut(s) | 77 |
| BspLI | GGNNCC | 1 cut(s) | 186 |
| BsrBI | CCGCTC | 1 cut(s) | 8 |
| BsrI | ACTGG | 1 cut(s) | 421 |
| BssMI | GATC | 3 cut(s) | 39, 60, 166 |
| BssNI | GRCGYC | 1 cut(s) | 23 |
| Bst4CI | ACNGT | 1 cut(s) | 56 |
| BstACI | GRCGYC | 1 cut(s) | 23 |
| BstC8I | GCNNGC | 2 cut(s) | 378, 447 |
| BstDEI | CTNAG | 2 cut(s) | 64, 381 |
| BstF5I | GGATG | 2 cut(s) | 256, 449 |
| BstKTI | GATC | 3 cut(s) | 42, 63, 169 |
| BstMBI | GATC | 3 cut(s) | 39, 60, 166 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 14, 76 |
| BstNSI | RCATGY | 1 cut(s) | 438 |
| BstSFI | CTRYAG | 1 cut(s) | 124 |
| BstV2I | GAAGAC | 1 cut(s) | 275 |
| BstX2I | RGATCY | 1 cut(s) | 60 |
| BstYI | RGATCY | 1 cut(s) | 60 |
| BtgZI | GCGATG | 1 cut(s) | 160 |
| BtsCI | GGATG | 2 cut(s) | 256, 449 |
| Cac8I | GCNNGC | 2 cut(s) | 378, 447 |
| CseI | GACGC | 1 cut(s) | 12 |
| Csp6I | GTAC | 1 cut(s) | 418 |
| CviAII | CATG | 2 cut(s) | 328, 435 |
| CviJI | RGCY | 7 cut(s) | 70, 79, 123, 152, 380, 396, 413 |
| CviKI_1 | RGCY | 7 cut(s) | 70, 79, 123, 152, 380, 396, 413 |
| CviQI | GTAC | 1 cut(s) | 418 |
| DdeI | CTNAG | 2 cut(s) | 64, 381 |
| DpnI | GATC | 3 cut(s) | 41, 62, 168 |
| DpnII | GATC | 3 cut(s) | 39, 60, 166 |
| Ecl136II | GAGCTC | 2 cut(s) | 70, 79 |
| Eco24I | GRGCYC | 2 cut(s) | 72, 81 |
| Eco53kI | GAGCTC | 2 cut(s) | 70, 79 |
| Eco57I | CTGAAG | 1 cut(s) | 386 |
| EcoICRI | GAGCTC | 2 cut(s) | 70, 79 |
| EcoT38I | GRGCYC | 2 cut(s) | 72, 81 |
| FaeI | CATG | 2 cut(s) | 331, 438 |
| FaiI | YATR | 8 cut(s) | 172, 221, 228, 321, 329, 393, 399, 436 |
| FatI | CATG | 2 cut(s) | 327, 434 |
| FauI | CCCGC | 1 cut(s) | 369 |
| FokI | GGATG | 2 cut(s) | 263, 436 |
| FriOI | GRGCYC | 2 cut(s) | 72, 81 |
| FspBI | CTAG | 1 cut(s) | 294 |
| GsuI | CTGGAG | 1 cut(s) | 371 |
| HgaI | GACGC | 1 cut(s) | 12 |
| Hin1I | GRCGYC | 1 cut(s) | 23 |
| Hin1II | CATG | 2 cut(s) | 331, 438 |
| HinfI | GANTC | 3 cut(s) | 32, 258, 332 |
| Hpy166II | GTNNAC | 1 cut(s) | 418 |
| Hpy188I | TCNGA | 3 cut(s) | 60, 67, 366 |
| Hpy188III | TCNNGA | 4 cut(s) | 188, 294, 350, 456 |
| Hpy8I | GTNNAC | 1 cut(s) | 418 |
| Hpy99I | CGWCG | 2 cut(s) | 28, 47 |
| HpyAV | CCTTC | 1 cut(s) | 248 |
| HpyCH4III | ACNGT | 1 cut(s) | 56 |
| HpyCH4V | TGCA | 1 cut(s) | 223 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 14, 76 |
| HpyF3I | CTNAG | 2 cut(s) | 64, 381 |
| Hsp92I | GRCGYC | 1 cut(s) | 23 |
| Hsp92II | CATG | 2 cut(s) | 331, 438 |
| Kzo9I | GATC | 3 cut(s) | 39, 60, 166 |
| LmnI | GCTCC | 2 cut(s) | 5, 75 |
| LpnPI | CCDG | 6 cut(s) | 102, 126, 201, 335, 431, 434 |
| MaeI | CTAG | 1 cut(s) | 294 |
| MalI | GATC | 3 cut(s) | 41, 62, 168 |
| MbiI | CCGCTC | 1 cut(s) | 8 |
| MboI | GATC | 3 cut(s) | 39, 60, 166 |
| MboII | GAAGA | 2 cut(s) | 275, 379 |
| MfeI | CAATTG | 1 cut(s) | 303 |
| MflI | RGATCY | 1 cut(s) | 60 |
| MhlI | GDGCHC | 2 cut(s) | 72, 81 |
| MluCI | AATT | 1 cut(s) | 303 |
| MlyI | GAGTC | 1 cut(s) | 267 |
| MmeI | TCCRAC | 2 cut(s) | 9, 222 |
| MnlI | CCTC | 5 cut(s) | 13, 169, 204, 213, 346 |
| MroXI | GAANNNNTTC | 1 cut(s) | 183 |
| MseI | TTAA | 1 cut(s) | 338 |
| MslI | CAYNNNNRTG | 1 cut(s) | 305 |
| MunI | CAATTG | 1 cut(s) | 303 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 14, 76 |
| NdeII | GATC | 3 cut(s) | 39, 60, 166 |
| NlaIII | CATG | 2 cut(s) | 331, 438 |
| NlaIV | GGNNCC | 1 cut(s) | 186 |
| NspI | RCATGY | 1 cut(s) | 438 |
| OliI | CACNNNNGTG | 1 cut(s) | 305 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 32 |
| PdmI | GAANNNNTTC | 1 cut(s) | 183 |
| PfeI | GAWTC | 2 cut(s) | 32, 332 |
| PleI | GAGTC | 1 cut(s) | 266 |
| PpsI | GAGTC | 1 cut(s) | 266 |
| Psp124BI | GAGCTC | 2 cut(s) | 72, 81 |
| PspN4I | GGNNCC | 1 cut(s) | 186 |
| PsuI | RGATCY | 1 cut(s) | 60 |
| RsaI | GTAC | 1 cut(s) | 419 |
| RsaNI | GTAC | 1 cut(s) | 418 |
| RseI | CAYNNNNRTG | 1 cut(s) | 305 |
| SacI | GAGCTC | 2 cut(s) | 72, 81 |
| SaqAI | TTAA | 1 cut(s) | 338 |
| Sau3AI | GATC | 3 cut(s) | 39, 60, 166 |
| SchI | GAGTC | 1 cut(s) | 267 |
| SduI | GDGCHC | 2 cut(s) | 72, 81 |
| SetI | ASST | 5 cut(s) | 72, 81, 196, 398, 415 |
| SfcI | CTRYAG | 1 cut(s) | 124 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 305 |
| Sse9I | AATT | 1 cut(s) | 303 |
| SsiI | CCGC | 2 cut(s) | 8, 376 |
| SspI | AATATT | 1 cut(s) | 132 |
| SspMI | CTAG | 1 cut(s) | 294 |
| SstI | GAGCTC | 2 cut(s) | 72, 81 |
| TaaI | ACNGT | 1 cut(s) | 56 |
| TasI | AATT | 1 cut(s) | 303 |
| TfiI | GAWTC | 2 cut(s) | 32, 332 |
| Tru1I | TTAA | 1 cut(s) | 338 |
| Tru9I | TTAA | 1 cut(s) | 338 |
| TspDTI | ATGAA | 3 cut(s) | 243, 267, 275 |
| TspGWI | ACGGA | 1 cut(s) | 170 |
| XbaI | TCTAGA | 1 cut(s) | 293 |
| XceI | RCATGY | 1 cut(s) | 438 |
| XmnI | GAANNNNTTC | 1 cut(s) | 183 |
| XspI | CTAG | 1 cut(s) | 294 |