ADP-ribosylation factor family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G19640 AT4G19640 |
| fragaria_vesca | FvH4_3g11910 |
| malus_domestica | MD00G1046600.v1.1 MD01G1006200.v1.1 MD15G1186500.v1.1 |
| pyrus_communis | pycom05g24470 |
| rosa_laevigata | RLG00000036433 |
| rosa_multiflora | Rmu_sc0000083.1_g000004 Rmu_sc0008232.1_g000017 Rmu_sc0010017.1_g000006 |
| rosa_roxburghii | Rroxscaffold_1G00056390 Rroxscaffold_5G00345420 |
| rosa_samantha | Rh1DG039100 Rh4CG034000 Rh5AG141200 Rh5AG279100 Rh5BG336400 Rh6BG008600 Rh6BG252700 Rh7CG226700 |
| rosa_wichuraiana | Rw1G009000 Rw3G019420 Rw4G002470 Rw7G039100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 96 |
| AcsI | RAATTY | 1 cut(s) | 74 |
| AgsI | TTSAA | 1 cut(s) | 74 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 23, 55 |
| AluBI | AGCT | 1 cut(s) | 26 |
| AluI | AGCT | 1 cut(s) | 26 |
| AoxI | GGCC | 1 cut(s) | 89 |
| ApoI | RAATTY | 1 cut(s) | 74 |
| AspLEI | GCGC | 1 cut(s) | 51 |
| AspS9I | GGNCC | 2 cut(s) | 82, 179 |
| AvaII | GGWCC | 2 cut(s) | 82, 179 |
| BccI | CCATC | 1 cut(s) | 170 |
| Bme18I | GGWCC | 2 cut(s) | 82, 179 |
| BmgT120I | GGNCC | 2 cut(s) | 82, 179 |
| BseGI | GGATG | 2 cut(s) | 22, 181 |
| BseYI | CCCAGC | 1 cut(s) | 26 |
| BshFI | GGCC | 1 cut(s) | 91 |
| BsnI | GGCC | 1 cut(s) | 91 |
| BspANI | GGCC | 1 cut(s) | 91 |
| BstF5I | GGATG | 2 cut(s) | 22, 181 |
| BstHHI | GCGC | 1 cut(s) | 51 |
| BstNSI | RCATGY | 1 cut(s) | 161 |
| BsuRI | GGCC | 1 cut(s) | 91 |
| BtsCI | GGATG | 2 cut(s) | 22, 181 |
| CfoI | GCGC | 1 cut(s) | 51 |
| Cfr13I | GGNCC | 2 cut(s) | 82, 179 |
| CviAII | CATG | 2 cut(s) | 158, 162 |
| CviJI | RGCY | 3 cut(s) | 26, 91, 141 |
| CviKI_1 | RGCY | 3 cut(s) | 26, 91, 141 |
| Eco147I | AGGCCT | 1 cut(s) | 91 |
| Eco47I | GGWCC | 2 cut(s) | 82, 179 |
| EcoT22I | ATGCAT | 1 cut(s) | 163 |
| FaeI | CATG | 2 cut(s) | 161, 165 |
| FaiI | YATR | 4 cut(s) | 87, 96, 159, 163 |
| FatI | CATG | 2 cut(s) | 157, 161 |
| FokI | GGATG | 1 cut(s) | 29 |
| GlaI | GCGC | 1 cut(s) | 50 |
| GsaI | CCCAGC | 1 cut(s) | 30 |
| HaeIII | GGCC | 1 cut(s) | 91 |
| HhaI | GCGC | 1 cut(s) | 51 |
| Hin1II | CATG | 2 cut(s) | 161, 165 |
| Hin6I | GCGC | 1 cut(s) | 49 |
| HinP1I | GCGC | 1 cut(s) | 49 |
| HpyCH4IV | ACGT | 1 cut(s) | 107 |
| HpyCH4V | TGCA | 3 cut(s) | 111, 121, 161 |
| HpySE526I | ACGT | 1 cut(s) | 107 |
| Hsp92II | CATG | 2 cut(s) | 161, 165 |
| HspAI | GCGC | 1 cut(s) | 49 |
| LmnI | GCTCC | 3 cut(s) | 23, 128, 165 |
| LpnPI | CCDG | 2 cut(s) | 12, 65 |
| MaeII | ACGT | 1 cut(s) | 107 |
| MluCI | AATT | 3 cut(s) | 65, 74, 184 |
| Mph1103I | ATGCAT | 1 cut(s) | 163 |
| MslI | CAYNNNNRTG | 2 cut(s) | 116, 160 |
| NlaIII | CATG | 2 cut(s) | 161, 165 |
| NsiI | ATGCAT | 1 cut(s) | 163 |
| NspI | RCATGY | 1 cut(s) | 161 |
| PceI | AGGCCT | 1 cut(s) | 91 |
| PsiI | TTATAA | 1 cut(s) | 96 |
| PspFI | CCCAGC | 1 cut(s) | 26 |
| PspPI | GGNCC | 2 cut(s) | 82, 179 |
| RseI | CAYNNNNRTG | 2 cut(s) | 116, 160 |
| Sau96I | GGNCC | 2 cut(s) | 82, 179 |
| SetI | ASST | 4 cut(s) | 28, 84, 110, 174 |
| SgeI | CNNG | 9 cut(s) | 23, 39, 48, 92, 120, 154, 170, 174, 181 |
| SinI | GGWCC | 2 cut(s) | 82, 179 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 116, 160 |
| Sse9I | AATT | 3 cut(s) | 65, 74, 184 |
| SseBI | AGGCCT | 1 cut(s) | 91 |
| StuI | AGGCCT | 1 cut(s) | 91 |
| TaiI | ACGT | 1 cut(s) | 110 |
| TasI | AATT | 3 cut(s) | 65, 74, 184 |
| VpaK11BI | GGWCC | 2 cut(s) | 82, 179 |
| XapI | RAATTY | 1 cut(s) | 74 |
| XceI | RCATGY | 1 cut(s) | 161 |
| Zsp2I | ATGCAT | 1 cut(s) | 163 |