Ras-related protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G19640 AT4G19640 |
| fragaria_vesca | FvH4_3g11910 |
| malus_domestica | MD00G1046600.v1.1 MD01G1006200.v1.1 MD15G1186500.v1.1 |
| pyrus_communis | pycom05g24470 |
| rosa_laevigata | RLG00000036433 |
| rosa_multiflora | Rmu_sc0000083.1_g000004 Rmu_sc0008232.1_g000017 Rmu_sc0010017.1_g000006 |
| rosa_roxburghii | Rroxscaffold_1G00056390 Rroxscaffold_5G00345420 |
| rosa_samantha | Rh1DG039100 Rh4CG034000 Rh5AG141200 Rh5AG279100 Rh5BG336400 Rh6BG008600 Rh6BG252700 Rh7CG226700 |
| rosa_wichuraiana | Rw1G009000 Rw3G019420 Rw4G002470 Rw7G039100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 113 |
| AccB1I | GGYRCC | 1 cut(s) | 148 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcsI | RAATTY | 2 cut(s) | 101, 258 |
| AfaI | GTAC | 1 cut(s) | 221 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 12 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 33, 65 |
| AluBI | AGCT | 1 cut(s) | 170 |
| AluI | AGCT | 1 cut(s) | 170 |
| AoxI | GGCC | 1 cut(s) | 3 |
| ApeKI | GCWGC | 1 cut(s) | 170 |
| ApoI | RAATTY | 2 cut(s) | 101, 258 |
| AsuC2I | CCSGG | 1 cut(s) | 13 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BanI | GGYRCC | 1 cut(s) | 148 |
| BbvI | GCAGC | 1 cut(s) | 157 |
| BccI | CCATC | 1 cut(s) | 228 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 246 |
| BciVI | GTATCC | 1 cut(s) | 109 |
| BcnI | CCSGG | 1 cut(s) | 13 |
| BfuAI | ACCTGC | 1 cut(s) | 113 |
| BfuI | GTATCC | 1 cut(s) | 109 |
| BisI | GCNGC | 1 cut(s) | 171 |
| BlsI | GCNGC | 1 cut(s) | 172 |
| Bme1390I | CCNGG | 1 cut(s) | 13 |
| BmiI | GGNNCC | 1 cut(s) | 150 |
| BmrFI | CCNGG | 1 cut(s) | 13 |
| BmsI | GCATC | 1 cut(s) | 79 |
| BpuMI | CCSGG | 1 cut(s) | 13 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 159, 189 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 12 |
| BseGI | GGATG | 2 cut(s) | 239, 250 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 12 |
| BseXI | GCAGC | 1 cut(s) | 157 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BshNI | GGYRCC | 1 cut(s) | 148 |
| BsiSI | CCGG | 1 cut(s) | 12 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 12 |
| BsnI | GGCC | 1 cut(s) | 5 |
| Bsp1407I | TGTACA | 1 cut(s) | 219 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspLI | GGNNCC | 1 cut(s) | 150 |
| BspMI | ACCTGC | 1 cut(s) | 113 |
| BspT107I | GGYRCC | 1 cut(s) | 148 |
| BsrGI | TGTACA | 1 cut(s) | 219 |
| Bst4CI | ACNGT | 2 cut(s) | 97, 253 |
| Bst6I | CTCTTC | 1 cut(s) | 233 |
| BstAUI | TGTACA | 1 cut(s) | 219 |
| BstF5I | GGATG | 2 cut(s) | 239, 250 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 176 |
| BstSCI | CCNGG | 1 cut(s) | 11 |
| BstV1I | GCAGC | 1 cut(s) | 157 |
| BsuI | GTATCC | 1 cut(s) | 109 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| BtsCI | GGATG | 2 cut(s) | 239, 250 |
| BveI | ACCTGC | 1 cut(s) | 113 |
| Csp6I | GTAC | 1 cut(s) | 220 |
| CviJI | RGCY | 3 cut(s) | 5, 80, 170 |
| CviKI_1 | RGCY | 3 cut(s) | 5, 80, 170 |
| CviQI | GTAC | 1 cut(s) | 220 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 1 cut(s) | 233 |
| EarI | CTCTTC | 1 cut(s) | 233 |
| EcoRI | GAATTC | 1 cut(s) | 258 |
| FaiI | YATR | 4 cut(s) | 141, 162, 192, 269 |
| Fnu4HI | GCNGC | 1 cut(s) | 171 |
| FokI | GGATG | 2 cut(s) | 246, 257 |
| Fsp4HI | GCNGC | 1 cut(s) | 171 |
| GluI | GCNGC | 1 cut(s) | 171 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| HapII | CCGG | 1 cut(s) | 12 |
| HinfI | GANTC | 1 cut(s) | 41 |
| HpaII | CCGG | 1 cut(s) | 12 |
| Hpy166II | GTNNAC | 1 cut(s) | 220 |
| Hpy188I | TCNGA | 1 cut(s) | 257 |
| Hpy188III | TCNNGA | 1 cut(s) | 128 |
| Hpy8I | GTNNAC | 1 cut(s) | 220 |
| HpyCH4III | ACNGT | 2 cut(s) | 97, 253 |
| HpyCH4V | TGCA | 3 cut(s) | 92, 179, 267 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 176 |
| LmnI | GCTCC | 1 cut(s) | 167 |
| LpnPI | CCDG | 2 cut(s) | 25, 108 |
| Lsp1109I | GCAGC | 1 cut(s) | 157 |
| LweI | GCATC | 1 cut(s) | 79 |
| MboII | GAAGA | 3 cut(s) | 52, 55, 250 |
| MfeI | CAATTG | 1 cut(s) | 48 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluCI | AATT | 7 cut(s) | 35, 48, 101, 183, 207, 223, 258 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MnlI | CCTC | 2 cut(s) | 126, 234 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MseI | TTAA | 1 cut(s) | 197 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspI | CCGG | 1 cut(s) | 12 |
| MspR9I | CCNGG | 1 cut(s) | 13 |
| MunI | CAATTG | 1 cut(s) | 48 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 176 |
| NciI | CCSGG | 1 cut(s) | 13 |
| NlaIV | GGNNCC | 1 cut(s) | 150 |
| PfeI | GAWTC | 1 cut(s) | 41 |
| PflFI | GACNNNGTC | 1 cut(s) | 251 |
| PkrI | GCNGC | 1 cut(s) | 172 |
| PspN4I | GGNNCC | 1 cut(s) | 150 |
| PsyI | GACNNNGTC | 1 cut(s) | 251 |
| RsaI | GTAC | 1 cut(s) | 221 |
| RsaNI | GTAC | 1 cut(s) | 220 |
| SaqAI | TTAA | 1 cut(s) | 197 |
| SatI | GCNGC | 1 cut(s) | 171 |
| ScrFI | CCNGG | 1 cut(s) | 13 |
| SetI | ASST | 3 cut(s) | 127, 137, 172 |
| SfaNI | GCATC | 1 cut(s) | 79 |
| SgeI | CNNG | 8 cut(s) | 24, 25, 31, 79, 135, 140, 226, 242 |
| Sse9I | AATT | 7 cut(s) | 35, 48, 101, 183, 207, 223, 258 |
| StyD4I | CCNGG | 1 cut(s) | 11 |
| TaaI | ACNGT | 2 cut(s) | 97, 253 |
| TaqI | TCGA | 1 cut(s) | 44 |
| TasI | AATT | 7 cut(s) | 35, 48, 101, 183, 207, 223, 258 |
| TatI | WGTACW | 1 cut(s) | 219 |
| TfiI | GAWTC | 1 cut(s) | 41 |
| Tru1I | TTAA | 1 cut(s) | 197 |
| Tru9I | TTAA | 1 cut(s) | 197 |
| TseI | GCWGC | 1 cut(s) | 170 |
| Tth111I | GACNNNGTC | 1 cut(s) | 251 |
| XapI | RAATTY | 2 cut(s) | 101, 258 |