Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0001860

Physical Location & Seq

Genomic Coordinates Reverse (-)

30250700 .. 30255269

Gene Structure 4570 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1207200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2094 bp

ATGAGCAGTCAGATAGTAGTGTTAATTTTAAGGTTGATTTTCCTTGTGGTGTTTCTTGGATGGCTTATGATTTGGATTGTGCTGCCTACAAAAACCTACAAAAATGACTGGAAACCCAACTTACAAAGCAAGCTCAATTCTACATATTTTGGAGAGCAAGGGGTTAATCTTCTGCTCTTCTCATTCCCAATGATGTTAATAGCAGCTTTGAGCTGTGTTTATCTCCATCTCCAAAACAAATCAACTAGGTCGTCATCCTCCACAAGTACTACCACTACCGGCGTCATTACAAAACGATTAGCCTTTTGGAAACGTCCGGTAATTGTGAAGGCTCCTCTGGGAATTGTCACTGCAATGGAGCTTGCTTTTGGACTCATGTTTGTTGCACTCTTGGTCTGGTCTCTTACCAATTACTTATATGTCAGCTTCGGCCACCTCCATATGCATTTGCCTGGCGAGAAAGTGTGGGAAGCGAAGTTTCGAAGTGTGTCATTGAGATTAGGTTACATTGGGAACATTTGCTGGGCACTTCTCTTCTTTCCTGTAACTCGAGGATCATCGATTTTACCTCTCTTCGGGCTCACATCTGAGTCAAGTATTAAGTATCATATTTGGCTCGGCCATCTCTCGATGATCCTCTTTGCTGCACATACCCTAGGGTTCGTCATCTACTGGACCATGACTAATCAGATGGTTCTGCTGCTTGAGTGGAGCAAAACCTATGTATCAAATGTAGCTGGGGAGATTGCAATTGTGTTGGCAATGGCCATGTGGATCACAAGCATTCCTCGCTTTAGGCGTAAAATGTTTGAACTTTTTTTTTACACCCACCATCTCTACGCACTCTACATCTTCTTCTACGCACTGCATGTCGGTGCTTCCTACTTCTGCATGCTCCTCCCCGGCATCTTCCTCTTCATCGTCGATCGATACTTGAGATTTTTACAGTCGTACCAACGAGCTGGGTTAGTCTCAGCTCGCGTTTTACCATGTGGTACCATTGAGCTCAACTTCGCCAAGACCCAAGGATTGGATTATAATCCCACTAGCATCTTGTTTATAAACGTGCCAAGCATATCCAAGCTGCAATGGCACCCATTTACAGTGACTTCAAACCCTAACATGGAGCCACACAATCTCAGTGTTGTTATCAAGAGTGAAGGAAGTTGGTCTCAAAAACTCTACAAGCAACTGTCTTCAAATGTGGATCATGTCCAAGCTTCTGTCGAAGGACCTTATGGCCCCATTTCATCTCATTTTCTAAGGCACGAGGCTCTGGTGATGTTCAGTGGAGGCAGTGGAATCACTTCTCTCATTTCCATAATCCGTGAAATTATTTTCCAAACCACCAAACCCGATTCCCATTTGCCACGTGTACGGCTCATATGTGCCTTCAAGAACACAGATGATCTGTCCATGCTACAACTCTTGCTTCCTATTTCTTCAACCCCTTCCGATTTTTCCCATGTAGATTTGAAAATTGAAGCCTATGTCACCAGAGAGACAGAACAGCCGCCGGCATTGGCTTGGAAGCCCATCCAAACAGTGTCCTTTAAGGCCGACCCATTGGACTCACCCATTTCTAGGGTTTTAGGTCCAAGCAGTTGGCTGTGGCTTGGTGCAACAATCTCGTCCTCATTCGTCTTGTTTCTCGTTACTTTGGGACTTACCACTCGTTTCTACATTTACCCGATTGACCACAACACTGGTGAAGTTTATCACCAGTCTTTTATCTGTCTCTGGTACATGTTTTTGGTCTGTTCTTGTATTTTGCTGGTATCTAGTGTAACTTTTCTTTGGTGCAAGAGACAACTAAATGCCTTGGAAGGGAAACAAATCCAAAATGGGGAAGCGCCAGCTCATGAAATAGAACTTGAAGGCCTTCCACATCATCCTGAAACCCTAATTGCTCAAGCCACACTGGTGCATTATGGAACAAGGCCTGATCTCAAGAAAATTCTGTTGGCGTCCAAGGGATCTGATATTGGAGTGTTGGTGTGTGGGCCAAGGAAGATGAGACATGATGTTGCCAAAATCTGTTCATCTCGTTCGGCAGATAATTTGCACTTCGAGTCCATTAGCTTCAACTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000293 GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0016491 GO:0016722 GO:0016723 GO:0055114

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NAD_binding_6

Protein Analysis

698

Amino Acids

78.92

Weight (kDa)

9.19

Isoelectric Point (pI)

42.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ferric_reduct	PF01794	167 - 286	8.5e-20	Ferric reductase like transmembrane component
FAD_binding_8	PF08022	323 - 415	2.6e-21	FAD-binding domain
NAD_binding_6	PF08030	423 - 681	8.8e-18	Ferric reductase NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001860)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G23980 AT5G23990 AT5G23990 AT5G23990
fragaria_vesca	FvH4_7g30120 FvH4_7g30120 FvH4_7g30141
malus_domestica	MD01G1207200.v1.1 MD07G1278100.v1.1
prunus_persica	Prupe.2G299900_v2.0.a1
pyrus_communis	pycom07g25310
rosa_chinensis	RchiOBHm_Chr1g0378121 RchiOBHm_Chr1g0378131 RchiOBHm_Chr1g0378151 RchiOBHm_Chr1g0378171
rosa_laevigata	RLG00000026465 RLG00000026467 RLG00000026469 RLG00000026470
rosa_multiflora	Rmu_sc0000625.1_g000007 Rmu_sc0000625.1_g000009 Rmu_sc0001465.1_g000007 Rmu_sc0001465.1_g000010
rosa_roxburghii	Rroxscaffold_156G00440270 Rroxscaffold_4G00280700 Rroxscaffold_4G00280710 Rroxscaffold_4G00280730 Rroxscaffold_4G00280760
rosa_rugosa	Rorug01G0406500 Rorug01G0406700
rosa_samantha	Rh1AG423000 Rh1AG423100 Rh1AG423300 Rh1BG385300 Rh1BG385500 Rh1BG385800 Rh1CG399300 Rh1CG399500 Rh1CG399600 Rh1DG416500 Rh1DG416700 Rh1DG416900
rosa_wichuraiana	Rw1G037390 Rw1G037400 Rw1G037420 Rw1G037430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1038, 1061
Acc65I	GGTACC	1 cut(s)	995
AccB1I	GGYRCC	2 cut(s)	995, 1092
AccB7I	CCANNNNNTGG	1 cut(s)	1030
AccII	CGCG	1 cut(s)	981
AciI	CCGC	1 cut(s)	1514
AclWI	GGATC	5 cut(s)	562, 628, 782, 1215, 1984
AcoI	YGGCCR	3 cut(s)	430, 619, 765
AcsI	RAATTY	1 cut(s)	1956
AcvI	CACGTG	1 cut(s)	1373
AcyI	GRCGYC	2 cut(s)	282, 1967
AfaI	GTAC	5 cut(s)	268, 953, 997, 1377, 1745
AfiI	CCNNNNNNNGG	6 cut(s)	575, 1030, 1123, 1584, 1827, 1846
AflIII	ACRYGT	2 cut(s)	1372, 1746
AgsI	TTSAA	9 cut(s)	812, 1113, 1200, 1396, 1446, 1477, 1484, 1877, 2086
AjnI	CCWGG	1 cut(s)	451
AjuI	GAANNNNNNNTTGG	2 cut(s)	1946, 1978
AleI	CACNNNNGTG	1 cut(s)	1922
Alw21I	GWGCWC	1 cut(s)	1008
Alw26I	GTCTC	7 cut(s)	405, 976, 1176, 1496, 1742, 1801, 2011
AlwI	GGATC	5 cut(s)	562, 628, 782, 1215, 1984
Ama87I	CYCGRG	1 cut(s)	549
AoxI	GGCC	8 cut(s)	430, 619, 765, 1240, 1557, 1879, 1940, 2003
ApeKI	GCWGC	5 cut(s)	82, 203, 644, 700, 1084
ApoI	RAATTY	1 cut(s)	1956
Asp700I	GAANNNNTTC	2 cut(s)	1306, 1881
Asp718I	GGTACC	1 cut(s)	995
AspA2I	CCTAGG	1 cut(s)	655
AspLEI	GCGC	1 cut(s)	1855
AspS9I	GGNCC	5 cut(s)	675, 1232, 1241, 1595, 2003
AsuC2I	CCSGG	1 cut(s)	903
AsuHPI	GGTGA	5 cut(s)	1291, 1486, 1566, 1712, 1721
AsuII	TTCGAA	1 cut(s)	481
AvaI	CYCGRG	1 cut(s)	549
AvaII	GGWCC	3 cut(s)	675, 1232, 1595
AvrII	CCTAGG	1 cut(s)	655
BaeGI	GKGCMC	1 cut(s)	529
BaeI	ACNNNNGTAYC	4 cut(s)	708, 741, 935, 968
BalI	TGGCCA	1 cut(s)	767
BanI	GGYRCC	2 cut(s)	995, 1092
BanII	GRGCYC	2 cut(s)	582, 1008
BauI	CACGAG	1 cut(s)	1268
BbrPI	CACGTG	1 cut(s)	1373
BbsI	GAAGAC	1 cut(s)	1188
Bbv12I	GWGCWC	1 cut(s)	1008
BbvI	GCAGC	5 cut(s)	69, 215, 631, 687, 1071
BccI	CCATC	6 cut(s)	54, 234, 630, 685, 840, 1544
BceAI	ACGGC	1 cut(s)	1394
BcgI	CGANNNNNNTGC	2 cut(s)	1611, 1645
BciT130I	CCWGG	1 cut(s)	453
BcnI	CCSGG	1 cut(s)	903
BcoDI	GTCTC	7 cut(s)	405, 976, 1176, 1496, 1742, 1801, 2011
BfaI	CTAG	5 cut(s)	246, 656, 1047, 1584, 1782
BfoI	RGCGCY	1 cut(s)	1856
BisI	GCNGC	6 cut(s)	83, 204, 645, 701, 1085, 1514
BlnI	CCTAGG	1 cut(s)	655
BlsI	GCNGC	6 cut(s)	84, 205, 646, 702, 1086, 1515
BmcAI	AGTACT	1 cut(s)	268
Bme1390I	CCNGG	2 cut(s)	453, 903
Bme18I	GGWCC	3 cut(s)	675, 1232, 1595
BmeT110I	CYCGRG	1 cut(s)	549
BmgT120I	GGNCC	5 cut(s)	675, 1232, 1241, 1595, 2003
BmiI	GGNNCC	5 cut(s)	333, 997, 1094, 1128, 1243
BmrFI	CCNGG	2 cut(s)	453, 903
BmsI	GCATC	2 cut(s)	915, 1059
BpiI	GAAGAC	1 cut(s)	1188
Bpu14I	TTCGAA	1 cut(s)	481
BpuEI	CTTGAG	4 cut(s)	725, 955, 1896, 1934
BpuMI	CCSGG	1 cut(s)	903
Bsa29I	ATCGAT	2 cut(s)	560, 928
BsaAI	YACGTR	1 cut(s)	1373
BsaBI	GATNNNNATC	1 cut(s)	1038
BsaHI	GRCGYC	2 cut(s)	282, 1967
BsaI	GGTCTC	2 cut(s)	405, 1176
BsaJI	CCNNGG	6 cut(s)	655, 901, 1024, 1821, 1971, 2006
BsaWI	WCCGGW	1 cut(s)	316
BsaXI	ACNNNNNCTCC	2 cut(s)	1980, 2010
Bsc4I	CCNNNNNNNGG	6 cut(s)	575, 1030, 1123, 1584, 1827, 1846
Bse118I	RCCGGY	2 cut(s)	278, 1516
Bse1I	ACTGG	6 cut(s)	113, 677, 1711, 1723, 1926, 2093
Bse3DI	GCAATG	3 cut(s)	360, 768, 1094
Bse8I	GATNNNNATC	1 cut(s)	1038
BseBI	CCWGG	1 cut(s)	453
BseCI	ATCGAT	2 cut(s)	560, 928
BseDI	CCNNGG	6 cut(s)	655, 901, 1024, 1821, 1971, 2006
BseGI	GGATG	4 cut(s)	65, 254, 1536, 1891
BseJI	GATNNNNATC	1 cut(s)	1038
BseLI	CCNNNNNNNGG	6 cut(s)	575, 1030, 1123, 1584, 1827, 1846
BseMI	GCAATG	3 cut(s)	360, 768, 1094
BseMII	CTCAG	3 cut(s)	579, 987, 1153
BseNI	ACTGG	6 cut(s)	113, 677, 1711, 1723, 1926, 2093
BseRI	GAGGAG	2 cut(s)	324, 887
BseSI	GKGCMC	1 cut(s)	529
BseXI	GCAGC	5 cut(s)	69, 215, 631, 687, 1071
BseYI	CCCAGC	3 cut(s)	522, 737, 962
BsgI	GTGCAG	1 cut(s)	630
Bsh1236I	CGCG	1 cut(s)	981
Bsh1285I	CGRYCG	1 cut(s)	928
BshFI	GGCC	8 cut(s)	432, 621, 767, 1242, 1559, 1881, 1942, 2005
BshNI	GGYRCC	2 cut(s)	995, 1092
BshVI	ATCGAT	2 cut(s)	560, 928
BsiEI	CGRYCG	1 cut(s)	928
BsiHKAI	GWGCWC	1 cut(s)	1008
BsiHKCI	CYCGRG	1 cut(s)	549
BsiSI	CCGG	4 cut(s)	279, 317, 903, 1517
BslFI	GGGAC	1 cut(s)	1677
BslI	CCNNNNNNNGG	6 cut(s)	575, 1030, 1123, 1584, 1827, 1846
BsmAI	GTCTC	7 cut(s)	405, 976, 1176, 1496, 1742, 1801, 2011
BsmFI	GGGAC	1 cut(s)	1677
BsmI	GAATGC	1 cut(s)	783
BsnI	GGCC	8 cut(s)	432, 621, 767, 1242, 1559, 1881, 1942, 2005
Bso31I	GGTCTC	2 cut(s)	405, 1176
BsoBI	CYCGRG	1 cut(s)	549
Bsp119I	TTCGAA	1 cut(s)	481
Bsp1286I	GDGCHC	3 cut(s)	529, 582, 1008
Bsp143I	GATC	8 cut(s)	554, 633, 774, 925, 1207, 1408, 1945, 1976
BspACI	CCGC	1 cut(s)	1514
BspANI	GGCC	8 cut(s)	432, 621, 767, 1242, 1559, 1881, 1942, 2005
BspCNI	CTCAG	3 cut(s)	580, 986, 1152
BspDI	ATCGAT	2 cut(s)	560, 928
BspFNI	CGCG	1 cut(s)	981
BspHI	TCATGA	1 cut(s)	1861
BspLI	GGNNCC	5 cut(s)	333, 997, 1094, 1128, 1243
BspPI	GGATC	5 cut(s)	562, 628, 782, 1215, 1984
BspQI	GCTCTTC	1 cut(s)	182
BspT104I	TTCGAA	1 cut(s)	481
BspT107I	GGYRCC	2 cut(s)	995, 1092
BspTNI	GGTCTC	2 cut(s)	405, 1176
BsrDI	GCAATG	3 cut(s)	360, 768, 1094
BsrFI	RCCGGY	2 cut(s)	278, 1516
BsrI	ACTGG	6 cut(s)	113, 677, 1711, 1723, 1926, 2093
BssAI	RCCGGY	2 cut(s)	278, 1516
BssECI	CCNNGG	6 cut(s)	655, 901, 1024, 1821, 1971, 2006
BssMI	GATC	8 cut(s)	554, 633, 774, 925, 1207, 1408, 1945, 1976
BssNI	GRCGYC	2 cut(s)	282, 1967
BssSI	CACGAG	1 cut(s)	1268
BssT1I	CCWWGG	5 cut(s)	655, 1024, 1821, 1971, 2006
Bst2BI	CACGAG	1 cut(s)	1268
Bst2UI	CCWGG	1 cut(s)	453
Bst4CI	ACNGT	4 cut(s)	948, 1105, 1194, 1546
Bst6I	CTCTTC	4 cut(s)	182, 539, 578, 920
BstACI	GRCGYC	2 cut(s)	282, 1967
BstBAI	YACGTR	1 cut(s)	1373
BstBI	TTCGAA	1 cut(s)	481
BstC8I	GCNNGC	6 cut(s)	131, 363, 893, 979, 1518, 1857
BstDEI	CTNAG	4 cut(s)	588, 973, 1139, 1262
BstF5I	GGATG	4 cut(s)	65, 254, 1536, 1891
BstFNI	CGCG	1 cut(s)	981
BstH2I	RGCGCY	1 cut(s)	1856
BstHHI	GCGC	1 cut(s)	1855
BstKTI	GATC	8 cut(s)	557, 636, 777, 928, 1210, 1411, 1948, 1979
BstMAI	GTCTC	7 cut(s)	405, 976, 1176, 1496, 1742, 1801, 2011
BstMBI	GATC	8 cut(s)	554, 633, 774, 925, 1207, 1408, 1945, 1976
BstMCI	CGRYCG	1 cut(s)	928
BstMWI	GCNNNNNNNGC	2 cut(s)	789, 1090
BstNI	CCWGG	1 cut(s)	453
BstNSI	RCATGY	3 cut(s)	872, 895, 1750
BstSCI	CCNGG	2 cut(s)	451, 901
BstSLI	GKGCMC	1 cut(s)	529
BstUI	CGCG	1 cut(s)	981
BstV1I	GCAGC	5 cut(s)	69, 215, 631, 687, 1071
BstV2I	GAAGAC	1 cut(s)	1188
BstX2I	RGATCY	1 cut(s)	1976
BstXI	CCANNNNNNTGG	3 cut(s)	962, 1605, 1706
BstYI	RGATCY	1 cut(s)	1976
Bsu15I	ATCGAT	2 cut(s)	560, 928
BsuRI	GGCC	8 cut(s)	432, 621, 767, 1242, 1559, 1881, 1942, 2005
BsuTUI	ATCGAT	2 cut(s)	560, 928
BtsCI	GGATG	4 cut(s)	65, 254, 1536, 1891
BtsI	GCAGTG	3 cut(s)	348, 863, 1303
BtsIMutI	CAGTG	9 cut(s)	348, 863, 1110, 1147, 1294, 1303, 1551, 1704, 1919
Cac8I	GCNNGC	6 cut(s)	131, 363, 893, 979, 1518, 1857
CciI	TCATGA	1 cut(s)	1861
CfoI	GCGC	1 cut(s)	1855
Cfr10I	RCCGGY	2 cut(s)	278, 1516
Cfr13I	GGNCC	5 cut(s)	675, 1232, 1241, 1595, 2003
ClaI	ATCGAT	2 cut(s)	560, 928
CseI	GACGC	2 cut(s)	271, 1956
Csp6I	GTAC	5 cut(s)	267, 952, 996, 1376, 1744
CviQI	GTAC	5 cut(s)	267, 952, 996, 1376, 1744
DdeI	CTNAG	4 cut(s)	588, 973, 1139, 1262
DpnI	GATC	8 cut(s)	556, 635, 776, 927, 1209, 1410, 1947, 1978
DpnII	GATC	8 cut(s)	554, 633, 774, 925, 1207, 1408, 1945, 1976
EaeI	YGGCCR	3 cut(s)	430, 619, 765
Eam1104I	CTCTTC	4 cut(s)	182, 539, 578, 920
EarI	CTCTTC	4 cut(s)	182, 539, 578, 920
Ecl136II	GAGCTC	1 cut(s)	1006
Eco130I	CCWWGG	5 cut(s)	655, 1024, 1821, 1971, 2006
Eco147I	AGGCCT	2 cut(s)	1881, 1942
Eco24I	GRGCYC	2 cut(s)	582, 1008
Eco31I	GGTCTC	2 cut(s)	405, 1176
Eco47I	GGWCC	3 cut(s)	675, 1232, 1595
Eco53kI	GAGCTC	1 cut(s)	1006
Eco72I	CACGTG	1 cut(s)	1373
Eco88I	CYCGRG	1 cut(s)	549
EcoICRI	GAGCTC	1 cut(s)	1006
EcoO109I	RGGNCCY	1 cut(s)	1232
EcoRII	CCWGG	1 cut(s)	451
EcoT14I	CCWWGG	5 cut(s)	655, 1024, 1821, 1971, 2006
EcoT22I	ATGCAT	1 cut(s)	447
EcoT38I	GRGCYC	2 cut(s)	582, 1008
ErhI	CCWWGG	5 cut(s)	655, 1024, 1821, 1971, 2006
FaqI	GGGAC	1 cut(s)	1677
FauNDI	CATATG	2 cut(s)	441, 1385
Fnu4HI	GCNGC	6 cut(s)	83, 204, 645, 701, 1085, 1514
FokI	GGATG	4 cut(s)	72, 241, 1523, 1878
FriOI	GRGCYC	2 cut(s)	582, 1008
Fsp4HI	GCNGC	6 cut(s)	83, 204, 645, 701, 1085, 1514
FspBI	CTAG	5 cut(s)	246, 656, 1047, 1584, 1782
GlaI	GCGC	1 cut(s)	1854
GluI	GCNGC	6 cut(s)	83, 204, 645, 701, 1085, 1514
GsaI	CCCAGC	3 cut(s)	526, 741, 966
HaeII	RGCGCY	1 cut(s)	1856
HaeIII	GGCC	8 cut(s)	432, 621, 767, 1242, 1559, 1881, 1942, 2005
HapII	CCGG	4 cut(s)	279, 317, 903, 1517
HgaI	GACGC	2 cut(s)	271, 1956
HhaI	GCGC	1 cut(s)	1855
Hin1I	GRCGYC	2 cut(s)	282, 1967
Hin6I	GCGC	1 cut(s)	1853
HinP1I	GCGC	1 cut(s)	1853
HindIII	AAGCTT	1 cut(s)	1218
HinfI	GANTC	6 cut(s)	372, 590, 1302, 1358, 1571, 2072
HpaII	CCGG	4 cut(s)	279, 317, 903, 1517
HphI	GGTGA	5 cut(s)	1291, 1486, 1566, 1712, 1721
Hpy166II	GTNNAC	1 cut(s)	1376
Hpy188I	TCNGA	5 cut(s)	12, 589, 690, 1456, 1981
Hpy188III	TCNNGA	6 cut(s)	628, 1153, 1396, 1862, 1895, 1951
Hpy8I	GTNNAC	1 cut(s)	1376
Hpy99I	CGWCG	1 cut(s)	926
HpyAV	CCTTC	8 cut(s)	322, 1154, 1223, 1402, 1461, 1820, 1871, 1892
HpyCH4III	ACNGT	4 cut(s)	948, 1105, 1194, 1546
HpyCH4IV	ACGT	3 cut(s)	313, 1065, 1372
HpyF10VI	GCNNNNNNNGC	2 cut(s)	789, 1090
HpyF3I	CTNAG	4 cut(s)	588, 973, 1139, 1262
HpySE526I	ACGT	3 cut(s)	313, 1065, 1372
Hsp92I	GRCGYC	2 cut(s)	282, 1967
HspAI	GCGC	1 cut(s)	1853
KpnI	GGTACC	1 cut(s)	999
KroI	GCCGGC	1 cut(s)	1516
KroNI	GCCGGC	1 cut(s)	1518
Kzo9I	GATC	8 cut(s)	554, 633, 774, 925, 1207, 1408, 1945, 1976
LguI	GCTCTTC	1 cut(s)	182
LmnI	GCTCC	5 cut(s)	337, 358, 711, 900, 1126
Lsp1109I	GCAGC	5 cut(s)	69, 215, 631, 687, 1071
LweI	GCATC	2 cut(s)	915, 1059
MaeI	CTAG	5 cut(s)	246, 656, 1047, 1584, 1782
MaeII	ACGT	3 cut(s)	313, 1065, 1372
MaeIII	GTNAC	7 cut(s)	346, 503, 544, 1105, 1492, 1654, 1786
MalI	GATC	8 cut(s)	556, 635, 776, 927, 1209, 1410, 1947, 1978
MboI	GATC	8 cut(s)	554, 633, 774, 925, 1207, 1408, 1945, 1976
MfeI	CAATTG	1 cut(s)	750
MflI	RGATCY	1 cut(s)	1976
MhlI	GDGCHC	3 cut(s)	529, 582, 1008
MlsI	TGGCCA	1 cut(s)	767
MluNI	TGGCCA	1 cut(s)	767
MlyI	GAGTC	4 cut(s)	366, 599, 1565, 2081
Mox20I	TGGCCA	1 cut(s)	767
Mph1103I	ATGCAT	1 cut(s)	447
MroNI	GCCGGC	1 cut(s)	1516
MroXI	GAANNNNTTC	2 cut(s)	1306, 1881
MscI	TGGCCA	1 cut(s)	767
MseI	TTAA	6 cut(s)	23, 29, 165, 197, 600, 1554
MslI	CAYNNNNRTG	3 cut(s)	353, 873, 1922
Msp20I	TGGCCA	1 cut(s)	767
MspI	CCGG	4 cut(s)	279, 317, 903, 1517
MspR9I	CCNGG	2 cut(s)	453, 903
MunI	CAATTG	1 cut(s)	750
Mva1269I	GAATGC	1 cut(s)	783
MvaI	CCWGG	1 cut(s)	453
MvnI	CGCG	1 cut(s)	981
MwoI	GCNNNNNNNGC	2 cut(s)	789, 1090
NaeI	GCCGGC	1 cut(s)	1518
NciI	CCSGG	1 cut(s)	903
NdeI	CATATG	2 cut(s)	441, 1385
NdeII	GATC	8 cut(s)	554, 633, 774, 925, 1207, 1408, 1945, 1976
NgoMIV	GCCGGC	1 cut(s)	1516
NlaIV	GGNNCC	5 cut(s)	333, 997, 1094, 1128, 1243
NmeAIII	GCCGAG	1 cut(s)	597
NmuCI	GTSAC	3 cut(s)	346, 1105, 1492
NsiI	ATGCAT	1 cut(s)	447
NspI	RCATGY	3 cut(s)	872, 895, 1750
NspV	TTCGAA	1 cut(s)	481
OliI	CACNNNNGTG	1 cut(s)	1922
PaeI	GCATGC	1 cut(s)	895
PaeR7I	CTCGAG	1 cut(s)	549
PagI	TCATGA	1 cut(s)	1861
PceI	AGGCCT	2 cut(s)	1881, 1942
PciI	ACATGT	1 cut(s)	1746
PciSI	GCTCTTC	1 cut(s)	182
PcsI	WCGNNNNNNNCGW	1 cut(s)	796
PctI	GAATGC	1 cut(s)	783
PdiI	GCCGGC	1 cut(s)	1518
PdmI	GAANNNNTTC	2 cut(s)	1306, 1881
PfeI	GAWTC	2 cut(s)	1302, 1358
PflMI	CCANNNNNTGG	1 cut(s)	1030
PkrI	GCNGC	6 cut(s)	84, 205, 646, 702, 1086, 1515
Ple19I	CGATCG	1 cut(s)	928
PleI	GAGTC	4 cut(s)	366, 598, 1565, 2080
PmaCI	CACGTG	1 cut(s)	1373
PmlI	CACGTG	1 cut(s)	1373
PpsI	GAGTC	4 cut(s)	366, 598, 1565, 2080
Ppu21I	YACGTR	1 cut(s)	1373
PpuMI	RGGWCCY	1 cut(s)	1232
PscI	ACATGT	1 cut(s)	1746
PsiI	TTATAA	2 cut(s)	1038, 1061
Psp124BI	GAGCTC	1 cut(s)	1008
Psp5II	RGGWCCY	1 cut(s)	1232
Psp6I	CCWGG	1 cut(s)	451
PspCI	CACGTG	1 cut(s)	1373
PspFI	CCCAGC	3 cut(s)	522, 737, 962
PspGI	CCWGG	1 cut(s)	451
PspN4I	GGNNCC	5 cut(s)	333, 997, 1094, 1128, 1243
PspPI	GGNCC	5 cut(s)	675, 1232, 1241, 1595, 2003
PspPPI	RGGWCCY	1 cut(s)	1232
PspXI	VCTCGAGB	1 cut(s)	549
PsuI	RGATCY	1 cut(s)	1976
PvuI	CGATCG	1 cut(s)	928
RsaI	GTAC	5 cut(s)	268, 953, 997, 1377, 1745
RsaNI	GTAC	5 cut(s)	267, 952, 996, 1376, 1744
RseI	CAYNNNNRTG	3 cut(s)	353, 873, 1922
SacI	GAGCTC	1 cut(s)	1008
SapI	GCTCTTC	1 cut(s)	182
SaqAI	TTAA	6 cut(s)	23, 29, 165, 197, 600, 1554
SatI	GCNGC	6 cut(s)	83, 204, 645, 701, 1085, 1514
Sau3AI	GATC	8 cut(s)	554, 633, 774, 925, 1207, 1408, 1945, 1976
Sau96I	GGNCC	5 cut(s)	675, 1232, 1241, 1595, 2003
ScaI	AGTACT	1 cut(s)	268
SchI	GAGTC	4 cut(s)	366, 599, 1565, 2081
ScrFI	CCNGG	2 cut(s)	453, 903
SduI	GDGCHC	3 cut(s)	529, 582, 1008
SfaNI	GCATC	2 cut(s)	915, 1059
Sfr274I	CTCGAG	1 cut(s)	549
SfuI	TTCGAA	1 cut(s)	481
SinI	GGWCC	3 cut(s)	675, 1232, 1595
SlaI	CTCGAG	1 cut(s)	549
SmiMI	CAYNNNNRTG	3 cut(s)	353, 873, 1922
SmlI	CTYRAG	5 cut(s)	549, 704, 934, 1911, 1949
SmoI	CTYRAG	5 cut(s)	549, 704, 934, 1911, 1949
SphI	GCATGC	1 cut(s)	895
SseBI	AGGCCT	2 cut(s)	1881, 1942
SsiI	CCGC	1 cut(s)	1514
SspMI	CTAG	5 cut(s)	246, 656, 1047, 1584, 1782
SstI	GAGCTC	1 cut(s)	1008
StuI	AGGCCT	2 cut(s)	1881, 1942
StyD4I	CCNGG	2 cut(s)	451, 901
StyI	CCWWGG	5 cut(s)	655, 1024, 1821, 1971, 2006
TaaI	ACNGT	4 cut(s)	948, 1105, 1194, 1546
TaiI	ACGT	3 cut(s)	316, 1068, 1375
TaqI	TCGA	8 cut(s)	481, 550, 560, 629, 924, 928, 1227, 2070
TatI	WGTACW	1 cut(s)	266
TauI	GCSGC	1 cut(s)	1516
TfiI	GAWTC	2 cut(s)	1302, 1358
Tru1I	TTAA	6 cut(s)	23, 29, 165, 197, 600, 1554
Tru9I	TTAA	6 cut(s)	23, 29, 165, 197, 600, 1554
TscAI	CASTG	9 cut(s)	355, 870, 1110, 1147, 1294, 1303, 1551, 1711, 1926
TseFI	GTSAC	3 cut(s)	346, 1105, 1492
TseI	GCWGC	5 cut(s)	82, 203, 644, 700, 1084
Tsp45I	GTSAC	3 cut(s)	346, 1105, 1492
TspDTI	ATGAA	4 cut(s)	907, 1239, 1878, 2031
TspGWI	ACGGA	1 cut(s)	1316
TspRI	CASTG	9 cut(s)	355, 870, 1110, 1147, 1294, 1303, 1551, 1711, 1926
Van91I	CCANNNNNTGG	1 cut(s)	1030
VpaK11BI	GGWCC	3 cut(s)	675, 1232, 1595
XapI	RAATTY	1 cut(s)	1956
XceI	RCATGY	3 cut(s)	872, 895, 1750
XhoI	CTCGAG	1 cut(s)	549
XmaJI	CCTAGG	1 cut(s)	655
XmnI	GAANNNNTTC	2 cut(s)	1306, 1881
XspI	CTAG	5 cut(s)	246, 656, 1047, 1584, 1782
ZrmI	AGTACT	1 cut(s)	268
Zsp2I	ATGCAT	1 cut(s)	447

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.