Rh1CG399600

Ferric reduction oxidase 4-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0001860
Physical Location & Seq
Reverse (-)
66607671 .. 66609086
1416 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG399600.1

Sequence Viewer

Length: 1008 bp
ATGATCATCAGGTTGATATTGCTTCTGGTGTTTGTTGGATGGCTCACAGTTTGGATTATGGTGCCAACAAAAACTTACAAATATACCTGGAAACCCAACCTTGAAGCCAATCTCACTTCAACTTATTTTGGAGTGCAAGGGACAAATCTGCTGCTTTTCGCTTTCCCAATGATGTTCGTAGCAGCCTTGAGCTGTGTTTATCTTCATCTAGTTCAGAAAAAATCACAGAACTCCAACGAGATCAGGTCGTCGGTTGCTGCTGGCTTCTGGAGACGTCCGGTGGTTGTAACGGCTCCTCTGGGGGTCGTCACGGCGATGGAGCTAGGGTTTGGGGTGATGTTTATTTCACTCTTGGTTTGGTCTCTAGCTAACTACTTGATTACCAGCTTCGGCAACCTCCATATGCATATGAATATGATGAGCATGGATAAAGTATGGCAAAGCAAGTTTCGAAGTGTATCGTTGAGACTTGGGTACATTGGGAACATATGCTGGGCGTTTCTCTTCTTTCCTGTGACTCGAAGCTCTTCGATTTTACACATGTTTGGGCTCACATCGGAGTCGAGTATAAAGTACCATATTTGGCTTGGCCATCTCTCCATGCTTCTATTTTCTGTACACACCGTAGGCTTCATCATCTACTGGGGCATGACTCATCAAATGGCTGAAATGCTAGAATGGAGCTCGACTTATGTATCAAACGTAGCTGGAGAGATTGCAATTGTGTTTGCAATGGCAATGTGGGTGACAAGCATTCCTCGTGTCAGACGGAAAATGTTTGAAGTATTTTTCTATACGCACCAGCTATACCCACTCTATATCTTGTTCTACGTATTACATGTTGGTGCTTCCTACTTCTGTATGATCCTTCCCGGAATCTTCCTCTTTGTCATTGATCGATACTTGAGATTTTTACAGTCTTCCCGACACGCTGCTTTAGTCTCAGCACGGGTTCTACCTTGTGAAACAATTGAGCTCAACTTCTCCACGAACAAAGGTAATACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000293 GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0016491 GO:0016722 GO:0016723 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAD_binding_8 Ferric_reduct NAD_binding_6

Protein Analysis

335

Amino Acids

38.54

Weight (kDa)

9.65

Isoelectric Point (pI)

41.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ferric_reduct PF01794 157 - 276 2.4e-19 Ferric reductase like transmembrane component
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 277
AccB1I GGYRCC 1 cut(s) 61
AclWI GGATC 1 cut(s) 859
AcoI YGGCCR 1 cut(s) 589
AcyI GRCGYC 1 cut(s) 274
AfaI GTAC 3 cut(s) 476, 575, 618
AflIII ACRYGT 2 cut(s) 540, 838
AgsI TTSAA 3 cut(s) 104, 120, 782
AjnI CCWGG 1 cut(s) 86
AluBI AGCT 9 cut(s) 192, 322, 368, 387, 525, 684, 707, 805, 976
AluI AGCT 9 cut(s) 192, 322, 368, 387, 525, 684, 707, 805, 976
Alw21I GWGCWC 2 cut(s) 686, 978
Alw26I GTCTC 4 cut(s) 265, 366, 460, 946
AlwI GGATC 1 cut(s) 859
AoxI GGCC 1 cut(s) 589
ApeKI GCWGC 4 cut(s) 151, 182, 257, 932
Asp700I GAANNNNTTC 1 cut(s) 526
AsuC2I CCSGG 1 cut(s) 873
AsuHPI GGTGA 2 cut(s) 346, 757
AsuII TTCGAA 1 cut(s) 451
BaeI ACNNNNGTAYC 2 cut(s) 678, 711
BalI TGGCCA 1 cut(s) 591
BanI GGYRCC 1 cut(s) 61
BanII GRGCYC 3 cut(s) 552, 686, 978
BauI CACGAG 1 cut(s) 759
BbsI GAAGAC 1 cut(s) 912
Bbv12I GWGCWC 2 cut(s) 686, 978
BbvI GCAGC 4 cut(s) 138, 194, 244, 919
BccI CCATC 3 cut(s) 33, 310, 600
BceAI ACGGC 2 cut(s) 306, 327
BciT130I CCWGG 1 cut(s) 88
BclI TGATCA 1 cut(s) 3
BcnI CCSGG 1 cut(s) 873
BcoDI GTCTC 4 cut(s) 265, 366, 460, 946
BfaI CTAG 4 cut(s) 209, 323, 365, 674
BisI GCNGC 4 cut(s) 152, 183, 258, 933
BlsI GCNGC 4 cut(s) 153, 184, 259, 934
Bme1390I CCNGG 2 cut(s) 88, 873
BmiI GGNNCC 2 cut(s) 63, 294
BmrFI CCNGG 2 cut(s) 88, 873
BmrI ACTGGG 1 cut(s) 652
BmuI ACTGGG 1 cut(s) 652
BpiI GAAGAC 1 cut(s) 912
BpmI CTGGAG 2 cut(s) 289, 729
Bpu14I TTCGAA 1 cut(s) 451
BpuEI CTTGAG 2 cut(s) 208, 925
BpuMI CCSGG 1 cut(s) 873
Bsa29I ATCGAT 1 cut(s) 898
BsaAI YACGTR 1 cut(s) 832
BsaHI GRCGYC 1 cut(s) 274
BsaI GGTCTC 1 cut(s) 366
BsaWI WCCGGW 1 cut(s) 277
BsaXI ACNNNNNCTCC 2 cut(s) 311, 341
Bse1I ACTGG 1 cut(s) 647
Bse3DI GCAATG 2 cut(s) 738, 744
BseBI CCWGG 1 cut(s) 88
BseCI ATCGAT 1 cut(s) 898
BseGI GGATG 1 cut(s) 44
BseMI GCAATG 2 cut(s) 738, 744
BseMII CTCAG 1 cut(s) 957
BseNI ACTGG 1 cut(s) 647
BseRI GAGGAG 1 cut(s) 285
BseXI GCAGC 4 cut(s) 138, 194, 244, 919
BseYI CCCAGC 1 cut(s) 492
BshFI GGCC 1 cut(s) 591
BshNI GGYRCC 1 cut(s) 61
BshVI ATCGAT 1 cut(s) 898
BsiHKAI GWGCWC 2 cut(s) 686, 978
BsiSI CCGG 2 cut(s) 278, 873
BslFI GGGAC 1 cut(s) 154
BsmAI GTCTC 4 cut(s) 265, 366, 460, 946
BsmBI CGTCTC 1 cut(s) 265
BsmFI GGGAC 1 cut(s) 154
BsmI GAATGC 1 cut(s) 753
BsnI GGCC 1 cut(s) 591
Bso31I GGTCTC 1 cut(s) 366
Bsp119I TTCGAA 1 cut(s) 451
Bsp1286I GDGCHC 3 cut(s) 552, 686, 978
Bsp1407I TGTACA 1 cut(s) 616
Bsp143I GATC 4 cut(s) 3, 240, 864, 895
BspANI GGCC 1 cut(s) 591
BspCNI CTCAG 1 cut(s) 956
BspDI ATCGAT 1 cut(s) 898
BspLI GGNNCC 2 cut(s) 63, 294
BspPI GGATC 1 cut(s) 859
BspQI GCTCTTC 1 cut(s) 532
BspT104I TTCGAA 1 cut(s) 451
BspT107I GGYRCC 1 cut(s) 61
BspTNI GGTCTC 1 cut(s) 366
BsrDI GCAATG 2 cut(s) 738, 744
BsrGI TGTACA 1 cut(s) 616
BsrI ACTGG 1 cut(s) 647
BssMI GATC 4 cut(s) 3, 240, 864, 895
BssNI GRCGYC 1 cut(s) 274
BssSI CACGAG 1 cut(s) 759
Bst2BI CACGAG 1 cut(s) 759
Bst2UI CCWGG 1 cut(s) 88
Bst4CI ACNGT 3 cut(s) 49, 625, 918
Bst6I CTCTTC 2 cut(s) 509, 532
BstACI GRCGYC 1 cut(s) 274
BstAUI TGTACA 1 cut(s) 616
BstBAI YACGTR 1 cut(s) 832
BstBI TTCGAA 1 cut(s) 451
BstC8I GCNNGC 1 cut(s) 262
BstDEI CTNAG 1 cut(s) 943
BstF5I GGATG 1 cut(s) 44
BstKTI GATC 4 cut(s) 6, 243, 867, 898
BstMAI GTCTC 4 cut(s) 265, 366, 460, 946
BstMBI GATC 4 cut(s) 3, 240, 864, 895
BstNI CCWGG 1 cut(s) 88
BstNSI RCATGY 2 cut(s) 544, 842
BstSCI CCNGG 2 cut(s) 86, 871
BstSNI TACGTA 1 cut(s) 832
BstV1I GCAGC 4 cut(s) 138, 194, 244, 919
BstV2I GAAGAC 1 cut(s) 912
Bsu15I ATCGAT 1 cut(s) 898
BsuRI GGCC 1 cut(s) 591
BsuTUI ATCGAT 1 cut(s) 898
BtgZI GCGATG 1 cut(s) 329
BtsCI GGATG 1 cut(s) 44
Cac8I GCNNGC 1 cut(s) 262
ClaI ATCGAT 1 cut(s) 898
Csp6I GTAC 3 cut(s) 475, 574, 617
CviAII CATG 5 cut(s) 424, 541, 601, 649, 839
CviQI GTAC 3 cut(s) 475, 574, 617
DdeI CTNAG 1 cut(s) 943
DpnI GATC 4 cut(s) 5, 242, 866, 897
DpnII GATC 4 cut(s) 3, 240, 864, 895
EaeI YGGCCR 1 cut(s) 589
Eam1104I CTCTTC 2 cut(s) 509, 532
EarI CTCTTC 2 cut(s) 509, 532
Ecl136II GAGCTC 2 cut(s) 684, 976
Eco105I TACGTA 1 cut(s) 832
Eco24I GRGCYC 3 cut(s) 552, 686, 978
Eco31I GGTCTC 1 cut(s) 366
Eco53kI GAGCTC 2 cut(s) 684, 976
EcoICRI GAGCTC 2 cut(s) 684, 976
EcoRII CCWGG 1 cut(s) 86
EcoT22I ATGCAT 1 cut(s) 408
EcoT38I GRGCYC 3 cut(s) 552, 686, 978
Esp3I CGTCTC 1 cut(s) 265
FaeI CATG 5 cut(s) 427, 544, 604, 652, 842
FaqI GGGAC 1 cut(s) 154
FatI CATG 5 cut(s) 423, 540, 600, 648, 838
FauNDI CATATG 3 cut(s) 402, 408, 488
FbaI TGATCA 1 cut(s) 3
Fnu4HI GCNGC 4 cut(s) 152, 183, 258, 933
FokI GGATG 1 cut(s) 51
FriOI GRGCYC 3 cut(s) 552, 686, 978
Fsp4HI GCNGC 4 cut(s) 152, 183, 258, 933
FspBI CTAG 4 cut(s) 209, 323, 365, 674
GluI GCNGC 4 cut(s) 152, 183, 258, 933
GsaI CCCAGC 1 cut(s) 496
GsuI CTGGAG 2 cut(s) 289, 729
HaeIII GGCC 1 cut(s) 591
HapII CCGG 2 cut(s) 278, 873
Hin1I GRCGYC 1 cut(s) 274
Hin1II CATG 5 cut(s) 427, 544, 604, 652, 842
HinfI GANTC 4 cut(s) 517, 560, 652, 876
HpaII CCGG 2 cut(s) 278, 873
HphI GGTGA 2 cut(s) 346, 757
Hpy166II GTNNAC 1 cut(s) 619
Hpy188I TCNGA 3 cut(s) 216, 559, 767
Hpy188III TCNNGA 2 cut(s) 268, 924
Hpy8I GTNNAC 1 cut(s) 619
Hpy99I CGWCG 1 cut(s) 253
HpyAV CCTTC 1 cut(s) 878
HpyCH4III ACNGT 3 cut(s) 49, 625, 918
HpyCH4IV ACGT 3 cut(s) 274, 702, 831
HpyCH4V TGCA 4 cut(s) 136, 406, 719, 731
HpyF3I CTNAG 1 cut(s) 943
HpySE526I ACGT 3 cut(s) 274, 702, 831
Hsp92I GRCGYC 1 cut(s) 274
Hsp92II CATG 5 cut(s) 427, 544, 604, 652, 842
Ksp22I TGATCA 1 cut(s) 3
Kzo9I GATC 4 cut(s) 3, 240, 864, 895
LguI GCTCTTC 1 cut(s) 532
LmnI GCTCC 3 cut(s) 298, 319, 681
Lsp1109I GCAGC 4 cut(s) 138, 194, 244, 919
MaeI CTAG 4 cut(s) 209, 323, 365, 674
MaeII ACGT 3 cut(s) 274, 702, 831
MaeIII GTNAC 4 cut(s) 286, 307, 514, 745
MalI GATC 4 cut(s) 5, 242, 866, 897
MboI GATC 4 cut(s) 3, 240, 864, 895
MboII GAAGA 5 cut(s) 194, 496, 519, 871, 912
MfeI CAATTG 2 cut(s) 720, 969
MhlI GDGCHC 3 cut(s) 552, 686, 978
MlsI TGGCCA 1 cut(s) 591
MluCI AATT 2 cut(s) 720, 969
MluNI TGGCCA 1 cut(s) 591
MlyI GAGTC 3 cut(s) 511, 569, 646
MmeI TCCRAC 2 cut(s) 16, 258
MnlI CCTC 4 cut(s) 306, 407, 768, 893
Mox20I TGGCCA 1 cut(s) 591
Mph1103I ATGCAT 1 cut(s) 408
MroXI GAANNNNTTC 1 cut(s) 526
MscI TGGCCA 1 cut(s) 591
MseI TTAA 1 cut(s) 1006
MslI CAYNNNNRTG 2 cut(s) 314, 843
Msp20I TGGCCA 1 cut(s) 591
MspI CCGG 2 cut(s) 278, 873
MspR9I CCNGG 2 cut(s) 88, 873
MunI CAATTG 2 cut(s) 720, 969
Mva1269I GAATGC 1 cut(s) 753
MvaI CCWGG 1 cut(s) 88
NciI CCSGG 1 cut(s) 873
NdeI CATATG 3 cut(s) 402, 408, 488
NdeII GATC 4 cut(s) 3, 240, 864, 895
NlaIII CATG 5 cut(s) 427, 544, 604, 652, 842
NlaIV GGNNCC 2 cut(s) 63, 294
NmuCI GTSAC 3 cut(s) 307, 514, 745
NsiI ATGCAT 1 cut(s) 408
NspI RCATGY 2 cut(s) 544, 842
NspV TTCGAA 1 cut(s) 451
PciI ACATGT 2 cut(s) 540, 838
PciSI GCTCTTC 1 cut(s) 532
PctI GAATGC 1 cut(s) 753
PdmI GAANNNNTTC 1 cut(s) 526
PfeI GAWTC 1 cut(s) 876
PfoI TCCNGGA 1 cut(s) 871
PkrI GCNGC 4 cut(s) 153, 184, 259, 934
PleI GAGTC 3 cut(s) 511, 568, 646
PpsI GAGTC 3 cut(s) 511, 568, 646
Ppu21I YACGTR 1 cut(s) 832
PscI ACATGT 2 cut(s) 540, 838
Psp124BI GAGCTC 2 cut(s) 686, 978
Psp6I CCWGG 1 cut(s) 86
PspFI CCCAGC 1 cut(s) 492
PspGI CCWGG 1 cut(s) 86
PspN4I GGNNCC 2 cut(s) 63, 294
RsaI GTAC 3 cut(s) 476, 575, 618
RsaNI GTAC 3 cut(s) 475, 574, 617
RseI CAYNNNNRTG 2 cut(s) 314, 843
SacI GAGCTC 2 cut(s) 686, 978
SapI GCTCTTC 1 cut(s) 532
SaqAI TTAA 1 cut(s) 1006
SatI GCNGC 4 cut(s) 152, 183, 258, 933
Sau3AI GATC 4 cut(s) 3, 240, 864, 895
SchI GAGTC 3 cut(s) 511, 569, 646
ScrFI CCNGG 2 cut(s) 88, 873
SduI GDGCHC 3 cut(s) 552, 686, 978
SfuI TTCGAA 1 cut(s) 451
SmiMI CAYNNNNRTG 2 cut(s) 314, 843
SmlI CTYRAG 2 cut(s) 187, 904
SmoI CTYRAG 2 cut(s) 187, 904
SnaBI TACGTA 1 cut(s) 832
Sse9I AATT 2 cut(s) 720, 969
SspMI CTAG 4 cut(s) 209, 323, 365, 674
SstI GAGCTC 2 cut(s) 686, 978
StyD4I CCNGG 2 cut(s) 86, 871
TaaI ACNGT 3 cut(s) 49, 625, 918
TaiI ACGT 3 cut(s) 277, 705, 834
TaqI TCGA 6 cut(s) 451, 520, 530, 563, 686, 898
TasI AATT 2 cut(s) 720, 969
TatI WGTACW 1 cut(s) 616
TfiI GAWTC 1 cut(s) 876
Tru1I TTAA 1 cut(s) 1006
Tru9I TTAA 1 cut(s) 1006
TseFI GTSAC 3 cut(s) 307, 514, 745
TseI GCWGC 4 cut(s) 151, 182, 257, 932
Tsp45I GTSAC 3 cut(s) 307, 514, 745
TspDTI ATGAA 3 cut(s) 194, 425, 622
TspGWI ACGGA 1 cut(s) 784
XceI RCATGY 2 cut(s) 544, 842
XcmI CCANNNNNNNNNTGG 1 cut(s) 584
XmnI GAANNNNTTC 1 cut(s) 526
XspI CTAG 4 cut(s) 209, 323, 365, 674
ZraI GACGTC 1 cut(s) 275
Zsp2I ATGCAT 1 cut(s) 408
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.