RchiOBHm_Chr1g0378121

Ferric reduction oxidase 4-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
64727527 .. 64732236
4710 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ60155

Sequence Viewer

Length: 2112 bp
ATGAGCACAAATACAGCAGTAGTATCAGTTATCAGGTTCATATTGCTTCCAGTGTTTGTTGGATGGCTCATCATTTGGATTGTGTTGCCAACCGAAACTTACAGAGATTCCTGGAGACCCTACCTCCAAGGCAAACTCAACTCAACATATTTCGGAGATCAAGGGACAAATCTGCTGCTTTTCTCGTTCCCGATGATGTTCATAGCAGCTTTGAGTTGTGTTTATCTCCATCTAATCCGGAAGAGGAAATCAAACAAGTCATCATACTCGACATACTACTCCACAAGCTTTGCTAGCTACTGGAGACGTCCGGCGAGTGTGAAATCTCCACTGGGAATTGTGACCGCAATGGAGCTCGGTTTCACAATAATGTTTATTGCACTCTTTGTGTGGTCTCTTACCAATTACATACATGTCGGCTTCGCCCACCTCCATAATATGCATACGAAACCAGTTCCAGGCCTGAAAGAGTGGGAAGCAAAGCTTCGTAGCGTGTCGTACAGACTTGGGTTAACCGGAAACATATGTCTGGCATTTCTCTTCTTCCCTGTAACTCGAGGCTCTTCGATTTTGGCTCTGGTTGGCTTAACATCGGAGTCGAGTATCAAGTACCATGTTTGGCTCGGCCATCTCTCCATGGTTCTATTTGCTGCTCATTCCCTAGGCTACATCATCTTCTGGGCCATCACTAATCAAATGGCTGAGATGCTAGAATGGAGCAAGACTCATGTATCAAACGTAGCTGGGGAGATTGCTATTCTATTTGCAATGGCAATGTGGGTGACTAGCATTCCTCGTGTTAGACGAAAAATGTTTGAATTATTTTTCTATACCCACCAGCTCTACGTTCTCTACATCGTCTTCTACGTACTGCACGCCGGTGCTAATTTCTTCTGTACGATCCTTCCTGGGATCTTCCTCTTCATCATAGATCGGTACCTGAGATTTTTACAGTCTAATCAACGCGCTGAGTTACTCTCCGCACGCATTTTACCTTGTGAGACCATTGAACTGAACTTCTCCAAGATCCAAGGTCTGGATTATAATCCCACTAGCATCTTGTTTATCAATGTGCCTAGTGTATCCAAGATGCAGTGGCACCCGTTTACAGTGAATTCGAACTCTAACATGGAGGCAGACAAGTTAAGTGTTGTGATTAAGAGTCTCGGAAGTTGGTCTCAGAAACTTTACCAGCAACTTTCTTCTAATTCTATGGATCATATTCAAGTTTCTGTTGAAGGGCCTTATGGACCTAATTCAACTCATTTTCTAAGGCACAAAGCTCTGGTGATGATTAGTGGAGGCAGTGGAATTACTCCGATGATCTCCATAATCCGAGAAATCATTTTCCAAAGCACCAAACCGGACTGCCATGTTCCGCCTGTTCGGTTGATATGTGCCTTCAAGAACTCAGCTGATCTCACCATGCTACAACTCTTGCTTCCAATTTCTGTCACACCTTCAAATTTTACCCAGCTGCAGTTTCAAATTGAAGCTTATGTGACCAGGGAGACACAGAAGCTGCCTCCATCAGACTCCCTCAAGCTTCTCCAAACCCTATGGTTTAAGCCAGACCCACTGGACTCACCCATTTCTTTGGTTCTAGGACAAAACACTTGGCTATGGCTTGGTGCTATAATCTCATCCTCATTTGTCTTATTTCTCTTTGTTTTGGGCATTGTCAATCGTTTCTATATATACCCAATCGACCACAACACTGGTGAACACTACCATGTCTCCTTCATTTGCCTGTGGTACATGTTTTTGATCTGTGCCTCCATTTTCATAGTCTCTAGTGCAGTCTACATTTGGTGCAAGAGACAGAACGCCATCGAAGATGCGAAGCAAACTCAGAATGCGAAATTATCAACACCAACAACTGATATCGAACTTGCGAGTTCTCCCCATAATCATGAGTCCCTGATTGCTCAAGCTACCCAAGTGCATTATGGAACTAGGCCTAACCTGAAGAAAATTCTGTTGGAGACCAAAGGATCTGATATTGGAGTGTTGGTTTGTGGCCCAAGGAAGATGAGGCATGAGGTTGCCACAGTCTGTTCATCCAGTTTGGCACATAATCTGCACTTTGAGTCCATTAGCTTTAACTGGTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

703

Amino Acids

79.9

Weight (kDa)

9.23

Isoelectric Point (pI)

39.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ferric_reduct PF01794 169 - 289 1.1e-19 Ferric reductase like transmembrane component
FAD_binding_8 PF08022 324 - 419 1.8e-23 FAD-binding domain
NAD_binding_6 PF08030 427 - 686 1.2e-21 Ferric reductase NAD binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1044
AatII GACGTC 1 cut(s) 310
Acc65I GGTACC 1 cut(s) 936
AccB1I GGYRCC 2 cut(s) 936, 1098
AccB7I CCANNNNNTGG 1 cut(s) 1036
AccI GTMKAC 1 cut(s) 1803
AccII CGCG 1 cut(s) 966
AccIII TCCGGA 1 cut(s) 237
AciI CCGC 3 cut(s) 345, 981, 1379
AclWI GGATC 5 cut(s) 895, 920, 1021, 1224, 2002
AcoI YGGCCR 1 cut(s) 625
AcsI RAATTY 3 cut(s) 1114, 1465, 1974
AcuI CTGAAG 1 cut(s) 1988
AcyI GRCGYC 1 cut(s) 307
AfaI GTAC 6 cut(s) 500, 611, 870, 898, 938, 1757
AfiI CCNNNNNNNGG 2 cut(s) 458, 1036
AflIII ACRYGT 2 cut(s) 412, 1758
AgsI TTSAA 9 cut(s) 818, 1010, 1226, 1238, 1260, 1405, 1464, 1487, 1493
AjnI CCWGG 4 cut(s) 110, 457, 907, 1505
AjuI GAANNNNNNNTTGG 2 cut(s) 1964, 1996
AleI CACNNNNGTG 1 cut(s) 879
Alw21I GWGCWC 2 cut(s) 8, 357
AlwI GGATC 5 cut(s) 895, 920, 1021, 1224, 2002
AlwNI CAGNNNCTG 1 cut(s) 1522
Ama87I CYCGRG 1 cut(s) 555
Aor13HI TCCGGA 1 cut(s) 237
AoxI GGCC 6 cut(s) 460, 625, 681, 1241, 1958, 2020
ApeKI GCWGC 5 cut(s) 175, 206, 650, 1477, 1522
ApoI RAATTY 3 cut(s) 1114, 1465, 1974
Asp718I GGTACC 1 cut(s) 936
AspA2I CCTAGG 1 cut(s) 661
AspLEI GCGC 1 cut(s) 968
AspS9I GGNCC 4 cut(s) 681, 1241, 1250, 2021
AsuHPI GGTGA 5 cut(s) 793, 1300, 1414, 1578, 1733
AsuII TTCGAA 1 cut(s) 1118
AsuNHI GCTAGC 1 cut(s) 293
AvaI CYCGRG 1 cut(s) 555
AvaII GGWCC 1 cut(s) 1250
AvrII CCTAGG 1 cut(s) 661
BaeI ACNNNNGTAYC 2 cut(s) 714, 747
BanI GGYRCC 2 cut(s) 936, 1098
BanII GRGCYC 1 cut(s) 357
BauI CACGAG 1 cut(s) 795
BbsI GAAGAC 1 cut(s) 853
Bbv12I GWGCWC 2 cut(s) 8, 357
BbvI GCAGC 5 cut(s) 162, 218, 637, 1464, 1509
BccI CCATC 6 cut(s) 57, 237, 636, 692, 1537, 1838
BciT130I CCWGG 4 cut(s) 112, 459, 909, 1507
BciVI GTATCC 1 cut(s) 1093
BfaI CTAG 9 cut(s) 294, 662, 710, 786, 1053, 1077, 1604, 1794, 1956
BfmI CTRYAG 1 cut(s) 1478
BfuI GTATCC 1 cut(s) 1093
BisI GCNGC 5 cut(s) 176, 207, 651, 1478, 1523
BlnI CCTAGG 1 cut(s) 661
BlsI GCNGC 5 cut(s) 177, 208, 652, 1479, 1524
Bme1390I CCNGG 4 cut(s) 112, 459, 909, 1507
Bme18I GGWCC 1 cut(s) 1250
BmeT110I CYCGRG 1 cut(s) 555
BmgT120I GGNCC 4 cut(s) 681, 1241, 1250, 2021
BmiI GGNNCC 2 cut(s) 938, 1100
BmrFI CCNGG 4 cut(s) 112, 459, 909, 1507
BmrI ACTGGG 1 cut(s) 341
BmsI GCATC 4 cut(s) 696, 1065, 1080, 1828
BmtI GCTAGC 1 cut(s) 297
BmuI ACTGGG 1 cut(s) 341
BpiI GAAGAC 1 cut(s) 853
BplI GAGNNNNNCTC 4 cut(s) 709, 741, 962, 994
BpmI CTGGAG 2 cut(s) 133, 322
Bpu14I TTCGAA 1 cut(s) 1118
BpuEI CTTGAG 2 cut(s) 1526, 1914
BsaAI YACGTR 1 cut(s) 868
BsaBI GATNNNNATC 1 cut(s) 1044
BsaHI GRCGYC 1 cut(s) 307
BsaI GGTCTC 5 cut(s) 109, 399, 995, 1182, 1979
BsaJI CCNNGG 7 cut(s) 127, 636, 661, 908, 1030, 1506, 2024
BsaWI WCCGGW 3 cut(s) 237, 515, 1363
BsaXI ACNNNNNCTCC 6 cut(s) 108, 138, 1721, 1751, 1998, 2028
Bsc4I CCNNNNNNNGG 2 cut(s) 458, 1036
Bse118I RCCGGY 1 cut(s) 878
Bse1I ACTGG 8 cut(s) 50, 305, 336, 452, 1584, 1723, 2064, 2111
Bse3DI GCAATG 3 cut(s) 354, 774, 780
Bse8I GATNNNNATC 1 cut(s) 1044
BseAI TCCGGA 1 cut(s) 237
BseBI CCWGG 4 cut(s) 112, 459, 909, 1507
BseDI CCNNGG 7 cut(s) 127, 636, 661, 908, 1030, 1506, 2024
BseGI GGATG 3 cut(s) 68, 1643, 2060
BseJI GATNNNNATC 1 cut(s) 1044
BseLI CCNNNNNNNGG 2 cut(s) 458, 1036
BseMI GCAATG 3 cut(s) 354, 774, 780
BseMII CTCAG 6 cut(s) 693, 932, 960, 1193, 1425, 1865
BseNI ACTGG 8 cut(s) 50, 305, 336, 452, 1584, 1723, 2064, 2111
BseXI GCAGC 5 cut(s) 162, 218, 637, 1464, 1509
BseYI CCCAGC 2 cut(s) 743, 1473
BsgI GTGCAG 3 cut(s) 857, 1818, 2066
Bsh1236I CGCG 1 cut(s) 966
BshFI GGCC 6 cut(s) 462, 627, 683, 1243, 1960, 2022
BshNI GGYRCC 2 cut(s) 936, 1098
BsiHKAI GWGCWC 2 cut(s) 8, 357
BsiHKCI CYCGRG 1 cut(s) 555
BsiSI CCGG 5 cut(s) 238, 311, 516, 879, 1364
BslFI GGGAC 2 cut(s) 178, 1903
BslI CCNNNNNNNGG 2 cut(s) 458, 1036
BsmBI CGTCTC 1 cut(s) 298
BsmFI GGGAC 2 cut(s) 178, 1903
BsmI GAATGC 2 cut(s) 789, 1861
BsnI GGCC 6 cut(s) 462, 627, 683, 1243, 1960, 2022
Bso31I GGTCTC 5 cut(s) 109, 399, 995, 1182, 1979
BsoBI CYCGRG 1 cut(s) 555
Bsp119I TTCGAA 1 cut(s) 1118
Bsp1286I GDGCHC 2 cut(s) 8, 357
Bsp13I TCCGGA 1 cut(s) 237
Bsp19I CCATGG 1 cut(s) 636
BspACI CCGC 3 cut(s) 345, 981, 1379
BspANI GGCC 6 cut(s) 462, 627, 683, 1243, 1960, 2022
BspCNI CTCAG 6 cut(s) 694, 933, 961, 1192, 1424, 1864
BspEI TCCGGA 1 cut(s) 237
BspFNI CGCG 1 cut(s) 966
BspHI TCATGA 1 cut(s) 1912
BspLI GGNNCC 2 cut(s) 938, 1100
BspMAI CTGCAG 1 cut(s) 1482
BspOI GCTAGC 1 cut(s) 297
BspPI GGATC 5 cut(s) 895, 920, 1021, 1224, 2002
BspQI GCTCTTC 1 cut(s) 568
BspT104I TTCGAA 1 cut(s) 1118
BspT107I GGYRCC 2 cut(s) 936, 1098
BspTNI GGTCTC 5 cut(s) 109, 399, 995, 1182, 1979
BsrDI GCAATG 3 cut(s) 354, 774, 780
BsrFI RCCGGY 1 cut(s) 878
BsrI ACTGG 8 cut(s) 50, 305, 336, 452, 1584, 1723, 2064, 2111
BssAI RCCGGY 1 cut(s) 878
BssECI CCNNGG 7 cut(s) 127, 636, 661, 908, 1030, 1506, 2024
BssNI GRCGYC 1 cut(s) 307
BssSI CACGAG 1 cut(s) 795
BssT1I CCWWGG 5 cut(s) 127, 636, 661, 1030, 2024
Bst2BI CACGAG 1 cut(s) 795
Bst2UI CCWGG 4 cut(s) 112, 459, 909, 1507
Bst4CI ACNGT 3 cut(s) 954, 1111, 2053
Bst6I CTCTTC 4 cut(s) 236, 545, 568, 926
BstACI GRCGYC 1 cut(s) 307
BstBAI YACGTR 1 cut(s) 868
BstBI TTCGAA 1 cut(s) 1118
BstC8I GCNNGC 3 cut(s) 295, 876, 985
BstDEI CTNAG 7 cut(s) 702, 941, 969, 1179, 1271, 1411, 1851
BstDSI CCRYGG 1 cut(s) 636
BstF5I GGATG 3 cut(s) 68, 1643, 2060
BstFNI CGCG 1 cut(s) 966
BstHHI GCGC 1 cut(s) 968
BstMWI GCNNNNNNNGC 1 cut(s) 294
BstNI CCWGG 4 cut(s) 112, 459, 909, 1507
BstNSI RCATGY 2 cut(s) 416, 1762
BstSCI CCNGG 4 cut(s) 110, 457, 907, 1505
BstSFI CTRYAG 1 cut(s) 1478
BstSNI TACGTA 1 cut(s) 868
BstUI CGCG 1 cut(s) 966
BstV1I GCAGC 5 cut(s) 162, 218, 637, 1464, 1509
BstV2I GAAGAC 1 cut(s) 853
BstX2I RGATCY 3 cut(s) 912, 1026, 1994
BstXI CCANNNNNNTGG 2 cut(s) 1597, 1718
BstYI RGATCY 3 cut(s) 912, 1026, 1994
BsuI GTATCC 1 cut(s) 1093
BsuRI GGCC 6 cut(s) 462, 627, 683, 1243, 1960, 2022
BtgI CCRYGG 1 cut(s) 636
BtsCI GGATG 3 cut(s) 68, 1643, 2060
BtsI GCAGTG 2 cut(s) 1100, 1312
BtsIMutI CAGTG 7 cut(s) 57, 329, 1100, 1116, 1312, 1577, 1716
Cac8I GCNNGC 3 cut(s) 295, 876, 985
CaiI CAGNNNCTG 1 cut(s) 1522
CciI TCATGA 1 cut(s) 1912
CfoI GCGC 1 cut(s) 968
Cfr10I RCCGGY 1 cut(s) 878
Cfr13I GGNCC 4 cut(s) 681, 1241, 1250, 2021
Csp6I GTAC 6 cut(s) 499, 610, 869, 897, 937, 1756
CspCI CAANNNNNGTGG 2 cut(s) 271, 306
CviQI GTAC 6 cut(s) 499, 610, 869, 897, 937, 1756
DdeI CTNAG 7 cut(s) 702, 941, 969, 1179, 1271, 1411, 1851
EaeI YGGCCR 1 cut(s) 625
Eam1104I CTCTTC 4 cut(s) 236, 545, 568, 926
EarI CTCTTC 4 cut(s) 236, 545, 568, 926
EciI GGCGGA 1 cut(s) 1368
Ecl136II GAGCTC 1 cut(s) 355
Eco105I TACGTA 1 cut(s) 868
Eco130I CCWWGG 5 cut(s) 127, 636, 661, 1030, 2024
Eco147I AGGCCT 2 cut(s) 462, 1960
Eco24I GRGCYC 1 cut(s) 357
Eco31I GGTCTC 5 cut(s) 109, 399, 995, 1182, 1979
Eco32I GATATC 1 cut(s) 1885
Eco47I GGWCC 1 cut(s) 1250
Eco53kI GAGCTC 1 cut(s) 355
Eco57I CTGAAG 1 cut(s) 1988
Eco88I CYCGRG 1 cut(s) 555
EcoICRI GAGCTC 1 cut(s) 355
EcoO109I RGGNCCY 1 cut(s) 1241
EcoRI GAATTC 1 cut(s) 1114
EcoRII CCWGG 4 cut(s) 110, 457, 907, 1505
EcoRV GATATC 1 cut(s) 1885
EcoT14I CCWWGG 5 cut(s) 127, 636, 661, 1030, 2024
EcoT22I ATGCAT 1 cut(s) 444
EcoT38I GRGCYC 1 cut(s) 357
ErhI CCWWGG 5 cut(s) 127, 636, 661, 1030, 2024
Esp3I CGTCTC 1 cut(s) 298
FalI AAGNNNNNCTT 2 cut(s) 468, 500
FaqI GGGAC 2 cut(s) 178, 1903
FauNDI CATATG 1 cut(s) 524
FblI GTMKAC 1 cut(s) 1803
Fnu4HI GCNGC 5 cut(s) 176, 207, 651, 1478, 1523
FokI GGATG 3 cut(s) 75, 1630, 2047
FriOI GRGCYC 1 cut(s) 357
Fsp4HI GCNGC 5 cut(s) 176, 207, 651, 1478, 1523
FspBI CTAG 9 cut(s) 294, 662, 710, 786, 1053, 1077, 1604, 1794, 1956
GlaI GCGC 1 cut(s) 967
GluI GCNGC 5 cut(s) 176, 207, 651, 1478, 1523
GsaI CCCAGC 2 cut(s) 747, 1477
GsuI CTGGAG 2 cut(s) 133, 322
HaeIII GGCC 6 cut(s) 462, 627, 683, 1243, 1960, 2022
HapII CCGG 5 cut(s) 238, 311, 516, 879, 1364
HhaI GCGC 1 cut(s) 968
Hin1I GRCGYC 1 cut(s) 307
Hin6I GCGC 1 cut(s) 966
HinP1I GCGC 1 cut(s) 966
HincII GTYRAC 1 cut(s) 513
HindII GTYRAC 1 cut(s) 513
HindIII AAGCTT 4 cut(s) 286, 482, 1494, 1544
HinfI GANTC 8 cut(s) 107, 596, 724, 1162, 1535, 1583, 1916, 2090
HpaI GTTAAC 1 cut(s) 513
HpaII CCGG 5 cut(s) 238, 311, 516, 879, 1364
HphI GGTGA 5 cut(s) 793, 1300, 1414, 1578, 1733
Hpy166II GTNNAC 4 cut(s) 513, 1107, 1724, 1804
Hpy188I TCNGA 9 cut(s) 155, 595, 1169, 1182, 1320, 1337, 1534, 1854, 1999
Hpy188III TCNNGA 5 cut(s) 190, 238, 1037, 1405, 1913
Hpy8I GTNNAC 4 cut(s) 513, 1107, 1724, 1804
HpyAV CCTTC 5 cut(s) 914, 1232, 1411, 1470, 1750
HpyCH4III ACNGT 3 cut(s) 954, 1111, 2053
HpyCH4IV ACGT 4 cut(s) 307, 738, 846, 867
HpyF10VI GCNNNNNNNGC 1 cut(s) 294
HpyF3I CTNAG 7 cut(s) 702, 941, 969, 1179, 1271, 1411, 1851
HpySE526I ACGT 4 cut(s) 307, 738, 846, 867
Hsp92I GRCGYC 1 cut(s) 307
HspAI GCGC 1 cut(s) 966
Kpn2I TCCGGA 1 cut(s) 237
KpnI GGTACC 1 cut(s) 940
KspAI GTTAAC 1 cut(s) 513
LguI GCTCTTC 1 cut(s) 568
LmnI GCTCC 2 cut(s) 352, 717
Lsp1109I GCAGC 5 cut(s) 162, 218, 637, 1464, 1509
LweI GCATC 4 cut(s) 696, 1065, 1080, 1828
MaeI CTAG 9 cut(s) 294, 662, 710, 786, 1053, 1077, 1604, 1794, 1956
MaeII ACGT 4 cut(s) 307, 738, 846, 867
MaeIII GTNAC 6 cut(s) 340, 550, 781, 972, 1453, 1501
MflI RGATCY 3 cut(s) 912, 1026, 1994
MhlI GDGCHC 2 cut(s) 8, 357
MlyI GAGTC 7 cut(s) 605, 718, 1171, 1529, 1577, 1925, 2099
MmeI TCCRAC 2 cut(s) 40, 1962
Mph1103I ATGCAT 1 cut(s) 444
MroI TCCGGA 1 cut(s) 237
MseI TTAA 6 cut(s) 512, 587, 1145, 1158, 1566, 2103
MslI CAYNNNNRTG 4 cut(s) 368, 879, 1731, 1911
MspA1I CMGCKG 2 cut(s) 1415, 1477
MspI CCGG 5 cut(s) 238, 311, 516, 879, 1364
MspR9I CCNGG 4 cut(s) 112, 459, 909, 1507
Mva1269I GAATGC 2 cut(s) 789, 1861
MvaI CCWGG 4 cut(s) 112, 459, 909, 1507
MvnI CGCG 1 cut(s) 966
MwoI GCNNNNNNNGC 1 cut(s) 294
NcoI CCATGG 1 cut(s) 636
NdeI CATATG 1 cut(s) 524
NheI GCTAGC 1 cut(s) 293
NlaIV GGNNCC 2 cut(s) 938, 1100
NmeAIII GCCGAG 1 cut(s) 603
NmuCI GTSAC 4 cut(s) 340, 781, 1453, 1501
NsiI ATGCAT 1 cut(s) 444
NspI RCATGY 2 cut(s) 416, 1762
NspV TTCGAA 1 cut(s) 1118
OliI CACNNNNGTG 1 cut(s) 879
PaeR7I CTCGAG 1 cut(s) 555
PagI TCATGA 1 cut(s) 1912
PceI AGGCCT 2 cut(s) 462, 1960
PciI ACATGT 2 cut(s) 412, 1758
PciSI GCTCTTC 1 cut(s) 568
PcsI WCGNNNNNNNCGW 2 cut(s) 802, 864
PctI GAATGC 2 cut(s) 789, 1861
PfeI GAWTC 1 cut(s) 107
PflMI CCANNNNNTGG 1 cut(s) 1036
PfoI TCCNGGA 1 cut(s) 110
PkrI GCNGC 5 cut(s) 177, 208, 652, 1479, 1524
PleI GAGTC 7 cut(s) 604, 718, 1170, 1529, 1577, 1924, 2098
PpsI GAGTC 7 cut(s) 604, 718, 1170, 1529, 1577, 1924, 2098
Ppu21I YACGTR 1 cut(s) 868
PscI ACATGT 2 cut(s) 412, 1758
PsiI TTATAA 1 cut(s) 1044
Psp124BI GAGCTC 1 cut(s) 357
Psp6I CCWGG 4 cut(s) 110, 457, 907, 1505
PspFI CCCAGC 2 cut(s) 743, 1473
PspGI CCWGG 4 cut(s) 110, 457, 907, 1505
PspN4I GGNNCC 2 cut(s) 938, 1100
PspPI GGNCC 4 cut(s) 681, 1241, 1250, 2021
PspXI VCTCGAGB 1 cut(s) 555
PstI CTGCAG 1 cut(s) 1482
PstNI CAGNNNCTG 1 cut(s) 1522
PsuI RGATCY 3 cut(s) 912, 1026, 1994
PvuII CAGCTG 2 cut(s) 1415, 1477
RsaI GTAC 6 cut(s) 500, 611, 870, 898, 938, 1757
RsaNI GTAC 6 cut(s) 499, 610, 869, 897, 937, 1756
RseI CAYNNNNRTG 4 cut(s) 368, 879, 1731, 1911
SacI GAGCTC 1 cut(s) 357
SapI GCTCTTC 1 cut(s) 568
SaqAI TTAA 6 cut(s) 512, 587, 1145, 1158, 1566, 2103
SatI GCNGC 5 cut(s) 176, 207, 651, 1478, 1523
Sau96I GGNCC 4 cut(s) 681, 1241, 1250, 2021
SchI GAGTC 7 cut(s) 605, 718, 1171, 1529, 1577, 1925, 2099
ScrFI CCNGG 4 cut(s) 112, 459, 909, 1507
SduI GDGCHC 2 cut(s) 8, 357
SfaNI GCATC 4 cut(s) 696, 1065, 1080, 1828
SfcI CTRYAG 1 cut(s) 1478
Sfr274I CTCGAG 1 cut(s) 555
SfuI TTCGAA 1 cut(s) 1118
SgrAI CRCCGGYG 1 cut(s) 878
SinI GGWCC 1 cut(s) 1250
SlaI CTCGAG 1 cut(s) 555
SmiMI CAYNNNNRTG 4 cut(s) 368, 879, 1731, 1911
SmlI CTYRAG 3 cut(s) 555, 1541, 1929
SmoI CTYRAG 3 cut(s) 555, 1541, 1929
SnaBI TACGTA 1 cut(s) 868
SseBI AGGCCT 2 cut(s) 462, 1960
SsiI CCGC 3 cut(s) 345, 981, 1379
SspMI CTAG 9 cut(s) 294, 662, 710, 786, 1053, 1077, 1604, 1794, 1956
SstI GAGCTC 1 cut(s) 357
StuI AGGCCT 2 cut(s) 462, 1960
StyD4I CCNGG 4 cut(s) 110, 457, 907, 1505
StyI CCWWGG 5 cut(s) 127, 636, 661, 1030, 2024
TaaI ACNGT 3 cut(s) 954, 1111, 2053
TaiI ACGT 4 cut(s) 310, 741, 849, 870
TaqI TCGA 8 cut(s) 269, 556, 566, 599, 1118, 1707, 1833, 1887
TfiI GAWTC 1 cut(s) 107
Tru1I TTAA 6 cut(s) 512, 587, 1145, 1158, 1566, 2103
Tru9I TTAA 6 cut(s) 512, 587, 1145, 1158, 1566, 2103
TscAI CASTG 7 cut(s) 57, 336, 1100, 1116, 1312, 1584, 1723
TseFI GTSAC 4 cut(s) 340, 781, 1453, 1501
TseI GCWGC 5 cut(s) 175, 206, 650, 1477, 1522
Tsp45I GTSAC 4 cut(s) 340, 781, 1453, 1501
TspDTI ATGAA 6 cut(s) 28, 190, 913, 1732, 1774, 2049
TspRI CASTG 7 cut(s) 57, 336, 1100, 1116, 1312, 1584, 1723
Van91I CCANNNNNTGG 1 cut(s) 1036
VpaK11BI GGWCC 1 cut(s) 1250
XapI RAATTY 3 cut(s) 1114, 1465, 1974
XceI RCATGY 2 cut(s) 416, 1762
XcmI CCANNNNNNNNNTGG 1 cut(s) 1946
XhoI CTCGAG 1 cut(s) 555
XmaJI CCTAGG 1 cut(s) 661
XmiI GTMKAC 1 cut(s) 1803
XspI CTAG 9 cut(s) 294, 662, 710, 786, 1053, 1077, 1604, 1794, 1956
ZraI GACGTC 1 cut(s) 308
Zsp2I ATGCAT 1 cut(s) 444
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.