Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0001860

Physical Location & Seq

Genomic Coordinates Forward (+)

3183269 .. 3187621

Gene Structure 4353 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00280730.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2112 bp

ATGAGCACAAATACAGCAGTAGTATCAGTTATGAGGTTCATATTGCTTCTAATGTTTGTTGGATGGCTCATCGTTTGGATTCTGTTGCCAACCAAAGCTTACGGATATTCCTGGAGACCCAACCTACAAGGCAAACTCAACTCAACATATTTCGGAGATAAAGGGACAAATCTGCTGCTTTTCTCGTTCCCGATGATGTTCATAGCTGCTTTGAGTTGTGTTTATCTCCATCTAATTCAGAAGGAGAAATCATCATACTCGACATACTACTCCACAAGCTTTGCTAGCTTCTGGAGGCGTCCGGCGAGTGTGAAAGCTCCACTGGGAATTGTGACTGCAATGGAGCTCGGTTTCGCATTAATGTTTGTTGCACTCTTGGTGTGGTCTCTTACCAATTACACACATGTCGGGTTTGCCTACCTCCATAATATGTATAAGAAACCAGTTCCGGGCCTGAAAGAGAAAGAGTGGGAAGCAAAGCTTCATTACGTATCGTACTGGCTTGGGTTAACCGGAAACATATGTCTGGCATTTCTCTTCTTCCCTGTAACTCGAGGCTCTTCGATTTTGGCAATGGTTGGGTTAACATCGGAGTCGAGTATGAAGTACCATATTTGGCTTGGCCATCTCTCCATGGTTCTATTTGCTGCTCATTCCGTAGGGTACATCATCTTCTGGGCCATCACTCATCAAATGGCTGAGATGCTAGAATGGAGCAAGACTTATGTATCAAACGTAGCTGGGGAGATTGCAATTGGATTTGCAATGGCAATGTGGGTGACTAGCATTCCTCGTGTTAGACAAAAAATGTTTGAACTATTTTTCTACACCCACCAGCTCTACGTTCTCTACATCGTCTTCTACGTACTGCACGCCGGTGCTTCCTCCTTCTGTACAATCCTTCCTGGAATCTTCCTGTTCATCATAGATCGGTACCTGAGATTTTTACAATCTAATCAACGAGCTGAGTTACTCTCTGCACGCATTTTACCTTGTGAGACTATTGAACTCAACTTCTCCAAGAGCCAAGGCCTGGATTATAATCCCACTAGCATCTTGTTTATCAATGTGCCTAATGTATCCAAGATGCAGTGGCACCCGTTTACAGTGAATTCGAACTCTAACATGGAGGAAGACAAGCTAAGTGTTGTGATTAAGAGTCTAGGAAGTTGGTCTCAGAAACTTTACCAGCAACTTTCTTCTAATTCTATGGATCATATTCAAGTTTCTGTTGAAGGGCCTTATGGACCTACTTCATCTCATTTCCTAAGGCACAAGGCTCTGGTGATGATTAGTGGAGGCAGTGGAATTACTCCGATGATCTCCATAATCCGAGAACTCATTTTCCAAAGCACCAAACCAGACTGCCATGTTCCGCCTGTTCGGTTTATATGTGCCTTCAAGAACTCAGCTGATCTCACCATGCTACAACTCATGCTTCCAATTTCTGTCACACCTTCAAATTTTACCCTGCTGCAGTTTCAAATTGAAGCCTATGTGACCAGGGAGACACAGCAGCAGCCTCCATCAGACCCCCACAAGCTTCTCCAAACCCTATGGTTTAAGCCAGACCCATTGGACTCGCCCATTTCTTTGGTTCTAGGACAAAACACTTGGCTATGGCTTGGTGCTATAGTTTCATCCTCATTTGTCTTATTTCTCTTTGTTTTGGGCATTGTCAATCGTTTCTATATATACCCAATTGAACACAACACTGGTGAACACTACCATGTCTCCTTCATTTGCCTGTGGTACATGTTTTTGGTCTGTGCCTCCATTTTCATAGTCTCCAGTGCAGTCTTCATTTGGCGCAAGAGACAGAACGCCATCGAAGAAGGGAAGCGAACTCAGAATGCGAAATTATCAACATCAACAACTGATGATATTGAACTTGAGAGTTCTCCCCATAATCATGAGTCCCTGATTGCTCAAGCTACCCAAGTGCATTACGGAACTAGGCCTGACCTGAAAAAAATTCTGTTGGAGACCAAAGGATCTGATATTGGAGTGTTGGTTTGTGGCCCAAGGAAGATGAGACATGAGGTTGCCACAGTTTGTTCATCCAGTTTGGCACATAATCTGCACTTTGAGTCCATTAGCTTTAACTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000293 GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0016491 GO:0016722 GO:0016723 GO:0055114

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NAD_binding_6

Protein Analysis

703

Amino Acids

80.0

Weight (kDa)

8.91

Isoelectric Point (pI)

39.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ferric_reduct	PF01794	168 - 288	1.2e-18	Ferric reductase like transmembrane component
FAD_binding_8	PF08022	323 - 419	3.2e-24	FAD-binding domain
NAD_binding_6	PF08030	426 - 686	8.3e-22	Ferric reductase NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001860)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G23980 AT5G23990 AT5G23990 AT5G23990
fragaria_vesca	FvH4_7g30120 FvH4_7g30120 FvH4_7g30141
malus_domestica	MD01G1207200.v1.1 MD07G1278100.v1.1
prunus_persica	Prupe.2G299900_v2.0.a1
pyrus_communis	pycom07g25310
rosa_chinensis	RchiOBHm_Chr1g0378121 RchiOBHm_Chr1g0378131 RchiOBHm_Chr1g0378151 RchiOBHm_Chr1g0378171
rosa_laevigata	RLG00000026465 RLG00000026467 RLG00000026469 RLG00000026470
rosa_multiflora	Rmu_sc0000625.1_g000007 Rmu_sc0000625.1_g000009 Rmu_sc0001465.1_g000007 Rmu_sc0001465.1_g000010
rosa_roxburghii	Rroxscaffold_156G00440270 Rroxscaffold_4G00280700 Rroxscaffold_4G00280710 Rroxscaffold_4G00280730 Rroxscaffold_4G00280760
rosa_rugosa	Rorug01G0406500 Rorug01G0406700
rosa_samantha	Rh1AG423000 Rh1AG423100 Rh1AG423300 Rh1BG385300 Rh1BG385500 Rh1BG385800 Rh1CG399300 Rh1CG399500 Rh1CG399600 Rh1DG416500 Rh1DG416700 Rh1DG416900
rosa_wichuraiana	Rw1G037390 Rw1G037400 Rw1G037420 Rw1G037430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1041
Acc65I	GGTACC	1 cut(s)	933
AccB1I	GGYRCC	2 cut(s)	933, 1095
AccB7I	CCANNNNNTGG	1 cut(s)	1033
AciI	CCGC	1 cut(s)	1376
AclWI	GGATC	2 cut(s)	1221, 2002
AcoI	YGGCCR	1 cut(s)	622
AcsI	RAATTY	3 cut(s)	1111, 1462, 1974
AcyI	GRCGYC	1 cut(s)	298
AfaI	GTAC	7 cut(s)	497, 608, 665, 867, 895, 935, 1754
AfiI	CCNNNNNNNGG	2 cut(s)	449, 1033
AflIII	ACRYGT	2 cut(s)	403, 1755
AjnI	CCWGG	4 cut(s)	110, 904, 1032, 1502
AleI	CACNNNNGTG	1 cut(s)	876
AloI	GAACNNNNNNTCC	2 cut(s)	1329, 1361
Alw21I	GWGCWC	2 cut(s)	8, 348
AlwI	GGATC	2 cut(s)	1221, 2002
Ama87I	CYCGRG	1 cut(s)	552
AoxI	GGCC	7 cut(s)	451, 622, 678, 1030, 1238, 1958, 2020
ApeKI	GCWGC	6 cut(s)	175, 206, 647, 1474, 1516, 1519
ApoI	RAATTY	3 cut(s)	1111, 1462, 1974
AseI	ATTAAT	1 cut(s)	359
Asp718I	GGTACC	1 cut(s)	933
AspLEI	GCGC	1 cut(s)	1812
AspS9I	GGNCC	5 cut(s)	451, 678, 1238, 1247, 2021
AsuC2I	CCSGG	1 cut(s)	450
AsuHPI	GGTGA	4 cut(s)	790, 1297, 1411, 1730
AsuII	TTCGAA	1 cut(s)	1115
AsuNHI	GCTAGC	1 cut(s)	284
AvaI	CYCGRG	1 cut(s)	552
AvaII	GGWCC	1 cut(s)	1247
AxyI	CCTNAGG	1 cut(s)	1268
BaeI	ACNNNNGTAYC	2 cut(s)	711, 744
BalI	TGGCCA	1 cut(s)	624
BanI	GGYRCC	2 cut(s)	933, 1095
BanII	GRGCYC	1 cut(s)	348
BarI	GAAGNNNNNNTAC	2 cut(s)	656, 688
BauI	CACGAG	1 cut(s)	792
BbsI	GAAGAC	3 cut(s)	850, 1140, 1792
Bbv12I	GWGCWC	2 cut(s)	8, 348
BbvI	GCAGC	6 cut(s)	162, 193, 634, 1461, 1528, 1531
BccI	CCATC	6 cut(s)	57, 237, 633, 689, 1534, 1835
BciT130I	CCWGG	4 cut(s)	112, 906, 1034, 1504
BciVI	GTATCC	1 cut(s)	1090
BcnI	CCSGG	1 cut(s)	450
BfaI	CTAG	7 cut(s)	285, 707, 783, 1050, 1163, 1601, 1956
BfmI	CTRYAG	2 cut(s)	1475, 1632
BfuI	GTATCC	1 cut(s)	1090
BisI	GCNGC	6 cut(s)	176, 207, 648, 1475, 1517, 1520
BlsI	GCNGC	6 cut(s)	177, 208, 649, 1476, 1518, 1521
Bme1390I	CCNGG	5 cut(s)	112, 450, 906, 1034, 1504
Bme18I	GGWCC	1 cut(s)	1247
BmeT110I	CYCGRG	1 cut(s)	552
BmgT120I	GGNCC	5 cut(s)	451, 678, 1238, 1247, 2021
BmiI	GGNNCC	2 cut(s)	935, 1097
BmrFI	CCNGG	5 cut(s)	112, 450, 906, 1034, 1504
BmrI	ACTGGG	1 cut(s)	332
BmsI	GCATC	3 cut(s)	693, 1062, 1077
BmtI	GCTAGC	1 cut(s)	288
BmuI	ACTGGG	1 cut(s)	332
BpiI	GAAGAC	3 cut(s)	850, 1140, 1792
BplI	GAGNNNNNCTC	2 cut(s)	959, 991
BpmI	CTGGAG	3 cut(s)	133, 313, 1774
Bpu14I	TTCGAA	1 cut(s)	1115
BpuEI	CTTGAG	2 cut(s)	1913, 1914
BpuMI	CCSGG	1 cut(s)	450
BsaAI	YACGTR	2 cut(s)	490, 865
BsaBI	GATNNNNATC	1 cut(s)	1041
BsaHI	GRCGYC	1 cut(s)	298
BsaI	GGTCTC	4 cut(s)	109, 390, 1179, 1979
BsaJI	CCNNGG	4 cut(s)	633, 1027, 1503, 2024
BsaWI	WCCGGW	1 cut(s)	512
BsaXI	ACNNNNNCTCC	4 cut(s)	1718, 1748, 1998, 2028
Bsc4I	CCNNNNNNNGG	2 cut(s)	449, 1033
Bse118I	RCCGGY	1 cut(s)	875
Bse1I	ACTGG	7 cut(s)	327, 443, 503, 1720, 1791, 2064, 2111
Bse21I	CCTNAGG	1 cut(s)	1268
Bse3DI	GCAATG	4 cut(s)	345, 579, 771, 777
Bse8I	GATNNNNATC	1 cut(s)	1041
BseBI	CCWGG	4 cut(s)	112, 906, 1034, 1504
BseDI	CCNNGG	4 cut(s)	633, 1027, 1503, 2024
BseGI	GGATG	3 cut(s)	68, 1640, 2060
BseJI	GATNNNNATC	1 cut(s)	1041
BseLI	CCNNNNNNNGG	2 cut(s)	449, 1033
BseMI	GCAATG	4 cut(s)	345, 579, 771, 777
BseMII	CTCAG	6 cut(s)	690, 929, 957, 1190, 1422, 1862
BseNI	ACTGG	7 cut(s)	327, 443, 503, 1720, 1791, 2064, 2111
BseXI	GCAGC	6 cut(s)	162, 193, 634, 1461, 1528, 1531
BseYI	CCCAGC	1 cut(s)	740
BsgI	GTGCAG	4 cut(s)	854, 963, 1815, 2066
BshFI	GGCC	7 cut(s)	453, 624, 680, 1032, 1240, 1960, 2022
BshNI	GGYRCC	2 cut(s)	933, 1095
BsiHKAI	GWGCWC	2 cut(s)	8, 348
BsiHKCI	CYCGRG	1 cut(s)	552
BsiSI	CCGG	4 cut(s)	302, 449, 513, 876
BslFI	GGGAC	2 cut(s)	178, 1903
BslI	CCNNNNNNNGG	2 cut(s)	449, 1033
BsmFI	GGGAC	2 cut(s)	178, 1903
BsmI	GAATGC	2 cut(s)	786, 1858
BsnI	GGCC	7 cut(s)	453, 624, 680, 1032, 1240, 1960, 2022
Bso31I	GGTCTC	4 cut(s)	109, 390, 1179, 1979
BsoBI	CYCGRG	1 cut(s)	552
Bsp119I	TTCGAA	1 cut(s)	1115
Bsp1286I	GDGCHC	2 cut(s)	8, 348
Bsp1407I	TGTACA	1 cut(s)	893
Bsp143I	GATC	5 cut(s)	928, 1213, 1320, 1414, 1994
Bsp19I	CCATGG	1 cut(s)	633
BspACI	CCGC	1 cut(s)	1376
BspANI	GGCC	7 cut(s)	453, 624, 680, 1032, 1240, 1960, 2022
BspCNI	CTCAG	6 cut(s)	691, 930, 958, 1189, 1421, 1861
BspHI	TCATGA	1 cut(s)	1912
BspLI	GGNNCC	2 cut(s)	935, 1097
BspMAI	CTGCAG	1 cut(s)	1479
BspOI	GCTAGC	1 cut(s)	288
BspPI	GGATC	2 cut(s)	1221, 2002
BspQI	GCTCTTC	1 cut(s)	565
BspT104I	TTCGAA	1 cut(s)	1115
BspT107I	GGYRCC	2 cut(s)	933, 1095
BspTNI	GGTCTC	4 cut(s)	109, 390, 1179, 1979
BsrDI	GCAATG	4 cut(s)	345, 579, 771, 777
BsrFI	RCCGGY	1 cut(s)	875
BsrGI	TGTACA	1 cut(s)	893
BsrI	ACTGG	7 cut(s)	327, 443, 503, 1720, 1791, 2064, 2111
BssAI	RCCGGY	1 cut(s)	875
BssECI	CCNNGG	4 cut(s)	633, 1027, 1503, 2024
BssMI	GATC	5 cut(s)	928, 1213, 1320, 1414, 1994
BssNI	GRCGYC	1 cut(s)	298
BssSI	CACGAG	1 cut(s)	792
BssT1I	CCWWGG	3 cut(s)	633, 1027, 2024
Bst2BI	CACGAG	1 cut(s)	792
Bst2UI	CCWGG	4 cut(s)	112, 906, 1034, 1504
Bst4CI	ACNGT	2 cut(s)	1108, 2053
Bst6I	CTCTTC	2 cut(s)	542, 565
BstACI	GRCGYC	1 cut(s)	298
BstAUI	TGTACA	1 cut(s)	893
BstBAI	YACGTR	2 cut(s)	490, 865
BstBI	TTCGAA	1 cut(s)	1115
BstC8I	GCNNGC	3 cut(s)	286, 873, 982
BstDEI	CTNAG	8 cut(s)	699, 938, 966, 1142, 1176, 1268, 1408, 1848
BstDSI	CCRYGG	1 cut(s)	633
BstF5I	GGATG	3 cut(s)	68, 1640, 2060
BstHHI	GCGC	1 cut(s)	1812
BstKTI	GATC	5 cut(s)	931, 1216, 1323, 1417, 1997
BstMBI	GATC	5 cut(s)	928, 1213, 1320, 1414, 1994
BstMWI	GCNNNNNNNGC	1 cut(s)	285
BstNI	CCWGG	4 cut(s)	112, 906, 1034, 1504
BstNSI	RCATGY	2 cut(s)	407, 1759
BstSCI	CCNGG	5 cut(s)	110, 448, 904, 1032, 1502
BstSFI	CTRYAG	2 cut(s)	1475, 1632
BstSNI	TACGTA	2 cut(s)	490, 865
BstV1I	GCAGC	6 cut(s)	162, 193, 634, 1461, 1528, 1531
BstV2I	GAAGAC	3 cut(s)	850, 1140, 1792
BstX2I	RGATCY	1 cut(s)	1994
BstXI	CCANNNNNNTGG	1 cut(s)	1594
BstYI	RGATCY	1 cut(s)	1994
Bsu36I	CCTNAGG	1 cut(s)	1268
BsuI	GTATCC	1 cut(s)	1090
BsuRI	GGCC	7 cut(s)	453, 624, 680, 1032, 1240, 1960, 2022
BtgI	CCRYGG	1 cut(s)	633
BtsCI	GGATG	3 cut(s)	68, 1640, 2060
BtsI	GCAGTG	2 cut(s)	1097, 1309
BtsIMutI	CAGTG	6 cut(s)	320, 1097, 1113, 1309, 1713, 1798
Cac8I	GCNNGC	3 cut(s)	286, 873, 982
CciI	TCATGA	1 cut(s)	1912
CfoI	GCGC	1 cut(s)	1812
Cfr10I	RCCGGY	1 cut(s)	875
Cfr13I	GGNCC	5 cut(s)	451, 678, 1238, 1247, 2021
CseI	GACGC	1 cut(s)	287
Csp6I	GTAC	7 cut(s)	496, 607, 664, 866, 894, 934, 1753
CspCI	CAANNNNNGTGG	2 cut(s)	262, 297
CviQI	GTAC	7 cut(s)	496, 607, 664, 866, 894, 934, 1753
DdeI	CTNAG	8 cut(s)	699, 938, 966, 1142, 1176, 1268, 1408, 1848
DpnI	GATC	5 cut(s)	930, 1215, 1322, 1416, 1996
DpnII	GATC	5 cut(s)	928, 1213, 1320, 1414, 1994
EaeI	YGGCCR	1 cut(s)	622
Eam1104I	CTCTTC	2 cut(s)	542, 565
EarI	CTCTTC	2 cut(s)	542, 565
EciI	GGCGGA	1 cut(s)	1365
Ecl136II	GAGCTC	1 cut(s)	346
Eco105I	TACGTA	2 cut(s)	490, 865
Eco130I	CCWWGG	3 cut(s)	633, 1027, 2024
Eco147I	AGGCCT	2 cut(s)	1032, 1960
Eco24I	GRGCYC	1 cut(s)	348
Eco31I	GGTCTC	4 cut(s)	109, 390, 1179, 1979
Eco47I	GGWCC	1 cut(s)	1247
Eco53kI	GAGCTC	1 cut(s)	346
Eco81I	CCTNAGG	1 cut(s)	1268
Eco88I	CYCGRG	1 cut(s)	552
EcoICRI	GAGCTC	1 cut(s)	346
EcoO109I	RGGNCCY	1 cut(s)	1238
EcoRI	GAATTC	1 cut(s)	1111
EcoRII	CCWGG	4 cut(s)	110, 904, 1032, 1502
EcoT14I	CCWWGG	3 cut(s)	633, 1027, 2024
EcoT38I	GRGCYC	1 cut(s)	348
ErhI	CCWWGG	3 cut(s)	633, 1027, 2024
FalI	AAGNNNNNCTT	2 cut(s)	465, 497
FaqI	GGGAC	2 cut(s)	178, 1903
FauNDI	CATATG	1 cut(s)	521
Fnu4HI	GCNGC	6 cut(s)	176, 207, 648, 1475, 1517, 1520
FokI	GGATG	3 cut(s)	75, 1627, 2047
FriOI	GRGCYC	1 cut(s)	348
Fsp4HI	GCNGC	6 cut(s)	176, 207, 648, 1475, 1517, 1520
FspBI	CTAG	7 cut(s)	285, 707, 783, 1050, 1163, 1601, 1956
GlaI	GCGC	1 cut(s)	1811
GluI	GCNGC	6 cut(s)	176, 207, 648, 1475, 1517, 1520
GsaI	CCCAGC	1 cut(s)	744
GsuI	CTGGAG	3 cut(s)	133, 313, 1774
HaeIII	GGCC	7 cut(s)	453, 624, 680, 1032, 1240, 1960, 2022
HapII	CCGG	4 cut(s)	302, 449, 513, 876
HgaI	GACGC	1 cut(s)	287
HhaI	GCGC	1 cut(s)	1812
Hin1I	GRCGYC	1 cut(s)	298
Hin6I	GCGC	1 cut(s)	1810
HinP1I	GCGC	1 cut(s)	1810
HincII	GTYRAC	2 cut(s)	510, 585
HindII	GTYRAC	2 cut(s)	510, 585
HindIII	AAGCTT	4 cut(s)	96, 277, 479, 1541
HinfI	GANTC	7 cut(s)	79, 593, 909, 1159, 1580, 1916, 2090
HpaI	GTTAAC	2 cut(s)	510, 585
HpaII	CCGG	4 cut(s)	302, 449, 513, 876
HphI	GGTGA	4 cut(s)	790, 1297, 1411, 1730
Hpy166II	GTNNAC	4 cut(s)	510, 585, 1104, 1721
Hpy188I	TCNGA	9 cut(s)	155, 240, 592, 1179, 1317, 1334, 1531, 1851, 1999
Hpy188III	TCNNGA	4 cut(s)	190, 292, 1402, 1913
Hpy8I	GTNNAC	4 cut(s)	510, 585, 1104, 1721
HpyAV	CCTTC	8 cut(s)	235, 898, 911, 1229, 1408, 1467, 1747, 1829
HpyCH4III	ACNGT	2 cut(s)	1108, 2053
HpyCH4IV	ACGT	4 cut(s)	489, 735, 843, 864
HpyF10VI	GCNNNNNNNGC	1 cut(s)	285
HpyF3I	CTNAG	8 cut(s)	699, 938, 966, 1142, 1176, 1268, 1408, 1848
HpySE526I	ACGT	4 cut(s)	489, 735, 843, 864
Hsp92I	GRCGYC	1 cut(s)	298
HspAI	GCGC	1 cut(s)	1810
KpnI	GGTACC	1 cut(s)	937
KspAI	GTTAAC	2 cut(s)	510, 585
Kzo9I	GATC	5 cut(s)	928, 1213, 1320, 1414, 1994
LguI	GCTCTTC	1 cut(s)	565
LmnI	GCTCC	3 cut(s)	322, 343, 714
Lsp1109I	GCAGC	6 cut(s)	162, 193, 634, 1461, 1528, 1531
LweI	GCATC	3 cut(s)	693, 1062, 1077
MaeI	CTAG	7 cut(s)	285, 707, 783, 1050, 1163, 1601, 1956
MaeII	ACGT	4 cut(s)	489, 735, 843, 864
MaeIII	GTNAC	6 cut(s)	331, 547, 778, 969, 1450, 1498
MalI	GATC	5 cut(s)	930, 1215, 1322, 1416, 1996
MboI	GATC	5 cut(s)	928, 1213, 1320, 1414, 1994
MfeI	CAATTG	2 cut(s)	753, 1701
MflI	RGATCY	1 cut(s)	1994
MhlI	GDGCHC	2 cut(s)	8, 348
MlsI	TGGCCA	1 cut(s)	624
MluNI	TGGCCA	1 cut(s)	624
MlyI	GAGTC	5 cut(s)	602, 1168, 1574, 1925, 2099
MmeI	TCCRAC	2 cut(s)	40, 1962
Mox20I	TGGCCA	1 cut(s)	624
MscI	TGGCCA	1 cut(s)	624
MseI	TTAA	6 cut(s)	359, 509, 584, 1155, 1563, 2103
MslI	CAYNNNNRTG	3 cut(s)	876, 1728, 1911
Msp20I	TGGCCA	1 cut(s)	624
MspA1I	CMGCKG	1 cut(s)	1412
MspI	CCGG	4 cut(s)	302, 449, 513, 876
MspR9I	CCNGG	5 cut(s)	112, 450, 906, 1034, 1504
MunI	CAATTG	2 cut(s)	753, 1701
Mva1269I	GAATGC	2 cut(s)	786, 1858
MvaI	CCWGG	4 cut(s)	112, 906, 1034, 1504
MwoI	GCNNNNNNNGC	1 cut(s)	285
NciI	CCSGG	1 cut(s)	450
NcoI	CCATGG	1 cut(s)	633
NdeI	CATATG	1 cut(s)	521
NdeII	GATC	5 cut(s)	928, 1213, 1320, 1414, 1994
NheI	GCTAGC	1 cut(s)	284
NlaIV	GGNNCC	2 cut(s)	935, 1097
NmuCI	GTSAC	4 cut(s)	331, 778, 1450, 1498
NspI	RCATGY	2 cut(s)	407, 1759
NspV	TTCGAA	1 cut(s)	1115
OliI	CACNNNNGTG	1 cut(s)	876
PaeR7I	CTCGAG	1 cut(s)	552
PagI	TCATGA	1 cut(s)	1912
PceI	AGGCCT	2 cut(s)	1032, 1960
PciI	ACATGT	2 cut(s)	403, 1755
PciSI	GCTCTTC	1 cut(s)	565
PcsI	WCGNNNNNNNCGW	1 cut(s)	861
PctI	GAATGC	2 cut(s)	786, 1858
PfeI	GAWTC	2 cut(s)	79, 909
PflMI	CCANNNNNTGG	1 cut(s)	1033
PfoI	TCCNGGA	2 cut(s)	110, 904
PkrI	GCNGC	6 cut(s)	177, 208, 649, 1476, 1518, 1521
PleI	GAGTC	5 cut(s)	601, 1167, 1574, 1924, 2098
PpsI	GAGTC	5 cut(s)	601, 1167, 1574, 1924, 2098
Ppu21I	YACGTR	2 cut(s)	490, 865
PscI	ACATGT	2 cut(s)	403, 1755
PshBI	ATTAAT	1 cut(s)	359
PsiI	TTATAA	1 cut(s)	1041
Psp124BI	GAGCTC	1 cut(s)	348
Psp6I	CCWGG	4 cut(s)	110, 904, 1032, 1502
PspFI	CCCAGC	1 cut(s)	740
PspGI	CCWGG	4 cut(s)	110, 904, 1032, 1502
PspN4I	GGNNCC	2 cut(s)	935, 1097
PspPI	GGNCC	5 cut(s)	451, 678, 1238, 1247, 2021
PspXI	VCTCGAGB	1 cut(s)	552
PstI	CTGCAG	1 cut(s)	1479
PsuI	RGATCY	1 cut(s)	1994
PvuII	CAGCTG	1 cut(s)	1412
RsaI	GTAC	7 cut(s)	497, 608, 665, 867, 895, 935, 1754
RsaNI	GTAC	7 cut(s)	496, 607, 664, 866, 894, 934, 1753
RseI	CAYNNNNRTG	3 cut(s)	876, 1728, 1911
SacI	GAGCTC	1 cut(s)	348
SapI	GCTCTTC	1 cut(s)	565
SaqAI	TTAA	6 cut(s)	359, 509, 584, 1155, 1563, 2103
SatI	GCNGC	6 cut(s)	176, 207, 648, 1475, 1517, 1520
Sau3AI	GATC	5 cut(s)	928, 1213, 1320, 1414, 1994
Sau96I	GGNCC	5 cut(s)	451, 678, 1238, 1247, 2021
SchI	GAGTC	5 cut(s)	602, 1168, 1574, 1925, 2099
ScrFI	CCNGG	5 cut(s)	112, 450, 906, 1034, 1504
SduI	GDGCHC	2 cut(s)	8, 348
SfaNI	GCATC	3 cut(s)	693, 1062, 1077
SfcI	CTRYAG	2 cut(s)	1475, 1632
Sfr274I	CTCGAG	1 cut(s)	552
SfuI	TTCGAA	1 cut(s)	1115
SgrAI	CRCCGGYG	1 cut(s)	875
SinI	GGWCC	1 cut(s)	1247
SlaI	CTCGAG	1 cut(s)	552
SmiMI	CAYNNNNRTG	3 cut(s)	876, 1728, 1911
SmlI	CTYRAG	3 cut(s)	552, 1892, 1929
SmoI	CTYRAG	3 cut(s)	552, 1892, 1929
SnaBI	TACGTA	2 cut(s)	490, 865
SseBI	AGGCCT	2 cut(s)	1032, 1960
SsiI	CCGC	1 cut(s)	1376
SspMI	CTAG	7 cut(s)	285, 707, 783, 1050, 1163, 1601, 1956
SstI	GAGCTC	1 cut(s)	348
StuI	AGGCCT	2 cut(s)	1032, 1960
StyD4I	CCNGG	5 cut(s)	110, 448, 904, 1032, 1502
StyI	CCWWGG	3 cut(s)	633, 1027, 2024
TaaI	ACNGT	2 cut(s)	1108, 2053
TaiI	ACGT	4 cut(s)	492, 738, 846, 867
TaqI	TCGA	6 cut(s)	260, 553, 563, 596, 1115, 1830
TatI	WGTACW	1 cut(s)	893
TfiI	GAWTC	2 cut(s)	79, 909
Tru1I	TTAA	6 cut(s)	359, 509, 584, 1155, 1563, 2103
Tru9I	TTAA	6 cut(s)	359, 509, 584, 1155, 1563, 2103
TscAI	CASTG	6 cut(s)	327, 1097, 1113, 1309, 1720, 1798
TseFI	GTSAC	4 cut(s)	331, 778, 1450, 1498
TseI	GCWGC	6 cut(s)	175, 206, 647, 1474, 1516, 1519
Tsp45I	GTSAC	4 cut(s)	331, 778, 1450, 1498
TspGWI	ACGGA	3 cut(s)	117, 646, 1965
TspRI	CASTG	6 cut(s)	327, 1097, 1113, 1309, 1720, 1798
Van91I	CCANNNNNTGG	1 cut(s)	1033
VpaK11BI	GGWCC	1 cut(s)	1247
VspI	ATTAAT	1 cut(s)	359
XapI	RAATTY	3 cut(s)	1111, 1462, 1974
XceI	RCATGY	2 cut(s)	407, 1759
XcmI	CCANNNNNNNNNTGG	1 cut(s)	617
XhoI	CTCGAG	1 cut(s)	552
XspI	CTAG	7 cut(s)	285, 707, 783, 1050, 1163, 1601, 1956

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.