Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0001860

Physical Location & Seq

Genomic Coordinates Forward (+)

3209344 .. 3214606

Gene Structure 5263 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000026470

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2112 bp

ATGAGCACAAATACAGCAGTAGTATCAGTCATCAGGTTCATATTGCTTCTAGTGTTTGTTGGATGGCTCATCATTTGGATTGCGTTGCCAACCGAAACTTACAGAGATTCCTGGAGACCCTACCTACAAGGCAAACTCAACTCAACATATTTCGGAGATCAAGGGACAAATCTGCTGCTTTTCTCGTTTCCGATGATGTTCATAGCAGCTTTGGGTTGTGTTTATCTCCATCTAATCCGGAAGAGGAAATCAAACAAGTCATCATACTCGACATACTACTCCACAAGCTTTGCTAGCTTCTGGCGACGTCCGACGAGTGTGAAATCTCCACTGGGAATTGTCACTGCAATGGAGCTCGGTTTCACAATAATGTTTATTGCACTCTTTGTGTGGTCTCTTACCAATTACATACATGTCGGCTTCTCCCACCTCCATAATATGCATACGAAACCAGTTCCAGGCCTGAAAGAGTGGGAAGCAAAGCTTCGTAGCGTGTCGTACAGACTTGGGTTAACCGGAAACACATGTCTGGCATTTCTCTTCTTCCCTGTAACTCGAGGCTCTTCGATTTTGGCTCTGGTTGGCTTAACATCGGAGTCGAGTATCAAGTACCATATTTGGCTCGGCCATCTCTCCATGGTCCTATTTGCTGCTCATTCTCTAGGCTACATCATCTTCTGGGCCATCACTAATCAAATGGCTGAGATGCTAGAATGGAGCAAGACTCATGTATCAAACGTAGCTGGGGAGATTGCAATTCTATTTGCAATGGCAATGTGGGTGACTAGCATTCCTCGTGTTAGACGAAAAATGTTTGAATTATTTTTCTACACCCACCAGCTCTACATTCTCTACATCGTCTTCTACGTACTGCACGCCGGTGAAAACTTCTTCAGTACGATCCTTCCTGGGATCTTCCTCTTCATCATAGATCGGTACCTGAGATTTTTACACTCTAATCAACGTGCTGAGTTACTCTCCGCACGCATTTTACCTTGTAAGACCATTGAACTGAACTTCTCCAAGAGCCAAGGTCTGGATTATAATCCCACTAGCATCTTGTTTATCAATGTCCCTACTATATCCAAGATGCAATGGCACCCATTTACAGTGACTTCGAACTCTAACATGGAGGCAGACAAGCTAACTGTTGTGATTAAGAGTCTAGGAAGTTGGTCTCAGAAACTTTACCAACAACTTTCTTCTAATTCTATGGATCATATTCAAGTTTCTGTTGAAGGGCCTTATGGACCTAATTCATCTCATTTTCTAAGGCACAAGGCTCTGGTGATGATTAGTGGAGGCAGTGGAATTACTCCGATGATCTCCATAATCCGAGAAATCATTTTCCAAAGCACCAAACCAGACTGCCATGTTCCGCCTGTTCGGTTGATATGTGCCTTCAAGAACTCAGCTGATCTCACCATGCTACAACTCTTGCTTCCAATTTCTGTCACACCTTCTAATTTTACCCAGCTGCAGTTTCAAATTGAAGCATATGTGACCAGGGAGACACAGAAGCTGCCTCCATCAGACACCCTCAAGCTTCTCCAAACCCTATGGTTTAAGCCAGACTCACTGGACTCACCCATATCTTTGGTTCTAGGACAAAACACTTGGCTATGGCTTGGTGCTATAATCTCATCCTCATTTGTCTTATTTCTCTTTGTTTTGGGCATTGTCAATCGTTTCTATATATACCCAATTGACCACAACACTGGTGAACACTACCATGTCTCCTTCATTTGCCTGTGGTACATGTTTTTGATCTGTACCTCCATTTTCTTAGTCTCCAGTGCAGTCTTCATTTGGTGCAAGAGACAGAACGCCATCGAAGATGCGAAGCGAACTCAGAATGCGAAATTATCAACACCAACAACTGATATCGAACTTGCGAGTTCTCCCCATAATCATGAGTCCCTGATTGCTCAAGCTACCCATGTGCATTATGGAACTAGGCCTGACCTGAAGAAAATTCTGTTGGAGACCAAAGGATCTGATATTGGAGTGTTGGTTTGTGGCCCAAGGAAGATGAGGCATGAGGTTGCCACAGTTTGTTCATCCAGTTTGGCACATAATCTGCACTTTGAGTCCATTAGCTTTAACTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000293 GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0016491 GO:0016722 GO:0016723 GO:0055114

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NAD_binding_6

Protein Analysis

704

Amino Acids

80.0

Weight (kDa)

9.31

Isoelectric Point (pI)

37.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ferric_reduct	PF01794	169 - 289	1.3e-19	Ferric reductase like transmembrane component
FAD_binding_8	PF08022	324 - 419	9.1e-24	FAD-binding domain
NAD_binding_6	PF08030	427 - 686	1.6e-21	Ferric reductase NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001860)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G23980 AT5G23990 AT5G23990 AT5G23990
fragaria_vesca	FvH4_7g30120 FvH4_7g30120 FvH4_7g30141
malus_domestica	MD01G1207200.v1.1 MD07G1278100.v1.1
prunus_persica	Prupe.2G299900_v2.0.a1
pyrus_communis	pycom07g25310
rosa_chinensis	RchiOBHm_Chr1g0378121 RchiOBHm_Chr1g0378131 RchiOBHm_Chr1g0378151 RchiOBHm_Chr1g0378171
rosa_laevigata	RLG00000026465 RLG00000026467 RLG00000026469 RLG00000026470
rosa_multiflora	Rmu_sc0000625.1_g000007 Rmu_sc0000625.1_g000009 Rmu_sc0001465.1_g000007 Rmu_sc0001465.1_g000010
rosa_roxburghii	Rroxscaffold_156G00440270 Rroxscaffold_4G00280700 Rroxscaffold_4G00280710 Rroxscaffold_4G00280730 Rroxscaffold_4G00280760
rosa_rugosa	Rorug01G0406500 Rorug01G0406700
rosa_samantha	Rh1AG423000 Rh1AG423100 Rh1AG423300 Rh1BG385300 Rh1BG385500 Rh1BG385800 Rh1CG399300 Rh1CG399500 Rh1CG399600 Rh1DG416500 Rh1DG416700 Rh1DG416900
rosa_wichuraiana	Rw1G037390 Rw1G037400 Rw1G037420 Rw1G037430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1044
AatII	GACGTC	1 cut(s)	310
Acc65I	GGTACC	1 cut(s)	936
AccB1I	GGYRCC	2 cut(s)	936, 1098
AccB7I	CCANNNNNTGG	1 cut(s)	1036
AccIII	TCCGGA	1 cut(s)	237
AciI	CCGC	2 cut(s)	981, 1379
AclWI	GGATC	4 cut(s)	895, 920, 1224, 2002
AcoI	YGGCCR	1 cut(s)	625
AcsI	RAATTY	1 cut(s)	1974
AcuI	CTGAAG	2 cut(s)	877, 1988
AcyI	GRCGYC	1 cut(s)	307
AfaI	GTAC	7 cut(s)	500, 611, 870, 898, 938, 1757, 1774
AfiI	CCNNNNNNNGG	2 cut(s)	458, 1036
AflIII	ACRYGT	3 cut(s)	412, 524, 1758
AgsI	TTSAA	7 cut(s)	818, 1010, 1226, 1238, 1405, 1487, 1493
AjnI	CCWGG	4 cut(s)	110, 457, 907, 1505
AjuI	GAANNNNNNNTTGG	2 cut(s)	1964, 1996
AleI	CACNNNNGTG	1 cut(s)	879
Alw21I	GWGCWC	2 cut(s)	8, 357
Alw26I	GTCTC	8 cut(s)	109, 399, 1182, 1505, 1741, 1795, 1813, 1979
AlwI	GGATC	4 cut(s)	895, 920, 1224, 2002
AlwNI	CAGNNNCTG	1 cut(s)	1522
Ama87I	CYCGRG	1 cut(s)	555
Aor13HI	TCCGGA	1 cut(s)	237
AoxI	GGCC	6 cut(s)	460, 625, 681, 1241, 1958, 2020
ApeKI	GCWGC	5 cut(s)	175, 206, 650, 1477, 1522
ApoI	RAATTY	1 cut(s)	1974
Asp718I	GGTACC	1 cut(s)	936
AspS9I	GGNCC	5 cut(s)	640, 681, 1241, 1250, 2021
AsuHPI	GGTGA	6 cut(s)	793, 893, 1300, 1414, 1578, 1733
AsuII	TTCGAA	1 cut(s)	1118
AsuNHI	GCTAGC	1 cut(s)	293
AvaI	CYCGRG	1 cut(s)	555
AvaII	GGWCC	2 cut(s)	640, 1250
BaeI	ACNNNNGTAYC	2 cut(s)	714, 747
BanI	GGYRCC	2 cut(s)	936, 1098
BanII	GRGCYC	1 cut(s)	357
BauI	CACGAG	1 cut(s)	795
BbsI	GAAGAC	2 cut(s)	853, 1795
Bbv12I	GWGCWC	2 cut(s)	8, 357
BbvI	GCAGC	5 cut(s)	162, 218, 637, 1464, 1509
BccI	CCATC	6 cut(s)	57, 237, 636, 692, 1537, 1838
BciT130I	CCWGG	4 cut(s)	112, 459, 909, 1507
BcoDI	GTCTC	8 cut(s)	109, 399, 1182, 1505, 1741, 1795, 1813, 1979
BfaI	CTAG	9 cut(s)	50, 294, 662, 710, 786, 1053, 1166, 1604, 1956
BfmI	CTRYAG	1 cut(s)	1478
BisI	GCNGC	5 cut(s)	176, 207, 651, 1478, 1523
BlsI	GCNGC	5 cut(s)	177, 208, 652, 1479, 1524
Bme1390I	CCNGG	4 cut(s)	112, 459, 909, 1507
Bme18I	GGWCC	2 cut(s)	640, 1250
BmeT110I	CYCGRG	1 cut(s)	555
BmgT120I	GGNCC	5 cut(s)	640, 681, 1241, 1250, 2021
BmiI	GGNNCC	2 cut(s)	938, 1100
BmrFI	CCNGG	4 cut(s)	112, 459, 909, 1507
BmrI	ACTGGG	1 cut(s)	341
BmsI	GCATC	4 cut(s)	696, 1065, 1080, 1828
BmtI	GCTAGC	1 cut(s)	297
BmuI	ACTGGG	1 cut(s)	341
BpiI	GAAGAC	2 cut(s)	853, 1795
BplI	GAGNNNNNCTC	4 cut(s)	709, 741, 962, 994
BpmI	CTGGAG	2 cut(s)	133, 1777
Bpu14I	TTCGAA	1 cut(s)	1118
BpuEI	CTTGAG	2 cut(s)	1526, 1914
BsaAI	YACGTR	1 cut(s)	868
BsaBI	GATNNNNATC	1 cut(s)	1044
BsaHI	GRCGYC	1 cut(s)	307
BsaI	GGTCTC	4 cut(s)	109, 399, 1182, 1979
BsaJI	CCNNGG	5 cut(s)	636, 908, 1030, 1506, 2024
BsaWI	WCCGGW	2 cut(s)	237, 515
BsaXI	ACNNNNNCTCC	4 cut(s)	1721, 1751, 1998, 2028
Bsc4I	CCNNNNNNNGG	2 cut(s)	458, 1036
Bse118I	RCCGGY	1 cut(s)	878
Bse1I	ACTGG	7 cut(s)	336, 452, 1584, 1723, 1794, 2064, 2111
Bse3DI	GCAATG	4 cut(s)	354, 774, 780, 1100
Bse8I	GATNNNNATC	1 cut(s)	1044
BseAI	TCCGGA	1 cut(s)	237
BseBI	CCWGG	4 cut(s)	112, 459, 909, 1507
BseDI	CCNNGG	5 cut(s)	636, 908, 1030, 1506, 2024
BseGI	GGATG	3 cut(s)	68, 1643, 2060
BseJI	GATNNNNATC	1 cut(s)	1044
BseLI	CCNNNNNNNGG	2 cut(s)	458, 1036
BseMI	GCAATG	4 cut(s)	354, 774, 780, 1100
BseMII	CTCAG	6 cut(s)	693, 932, 960, 1193, 1425, 1865
BseNI	ACTGG	7 cut(s)	336, 452, 1584, 1723, 1794, 2064, 2111
BseXI	GCAGC	5 cut(s)	162, 218, 637, 1464, 1509
BseYI	CCCAGC	2 cut(s)	743, 1473
BsgI	GTGCAG	3 cut(s)	857, 1818, 2066
BshFI	GGCC	6 cut(s)	462, 627, 683, 1243, 1960, 2022
BshNI	GGYRCC	2 cut(s)	936, 1098
BsiHKAI	GWGCWC	2 cut(s)	8, 357
BsiHKCI	CYCGRG	1 cut(s)	555
BsiSI	CCGG	3 cut(s)	238, 516, 879
BslFI	GGGAC	3 cut(s)	178, 1058, 1903
BslI	CCNNNNNNNGG	2 cut(s)	458, 1036
BsmAI	GTCTC	8 cut(s)	109, 399, 1182, 1505, 1741, 1795, 1813, 1979
BsmFI	GGGAC	3 cut(s)	178, 1058, 1903
BsmI	GAATGC	2 cut(s)	789, 1861
BsnI	GGCC	6 cut(s)	462, 627, 683, 1243, 1960, 2022
Bso31I	GGTCTC	4 cut(s)	109, 399, 1182, 1979
BsoBI	CYCGRG	1 cut(s)	555
Bsp119I	TTCGAA	1 cut(s)	1118
Bsp1286I	GDGCHC	2 cut(s)	8, 357
Bsp13I	TCCGGA	1 cut(s)	237
Bsp143I	GATC	9 cut(s)	157, 900, 912, 931, 1216, 1323, 1417, 1767, 1994
Bsp19I	CCATGG	1 cut(s)	636
BspACI	CCGC	2 cut(s)	981, 1379
BspANI	GGCC	6 cut(s)	462, 627, 683, 1243, 1960, 2022
BspCNI	CTCAG	6 cut(s)	694, 933, 961, 1192, 1424, 1864
BspEI	TCCGGA	1 cut(s)	237
BspHI	TCATGA	1 cut(s)	1912
BspLI	GGNNCC	2 cut(s)	938, 1100
BspMAI	CTGCAG	1 cut(s)	1482
BspOI	GCTAGC	1 cut(s)	297
BspPI	GGATC	4 cut(s)	895, 920, 1224, 2002
BspQI	GCTCTTC	1 cut(s)	568
BspT104I	TTCGAA	1 cut(s)	1118
BspT107I	GGYRCC	2 cut(s)	936, 1098
BspTNI	GGTCTC	4 cut(s)	109, 399, 1182, 1979
BsrDI	GCAATG	4 cut(s)	354, 774, 780, 1100
BsrFI	RCCGGY	1 cut(s)	878
BsrI	ACTGG	7 cut(s)	336, 452, 1584, 1723, 1794, 2064, 2111
BssAI	RCCGGY	1 cut(s)	878
BssECI	CCNNGG	5 cut(s)	636, 908, 1030, 1506, 2024
BssMI	GATC	9 cut(s)	157, 900, 912, 931, 1216, 1323, 1417, 1767, 1994
BssNI	GRCGYC	1 cut(s)	307
BssSI	CACGAG	1 cut(s)	795
BssT1I	CCWWGG	3 cut(s)	636, 1030, 2024
Bst2BI	CACGAG	1 cut(s)	795
Bst2UI	CCWGG	4 cut(s)	112, 459, 909, 1507
Bst4CI	ACNGT	3 cut(s)	1111, 1150, 2053
Bst6I	CTCTTC	4 cut(s)	236, 545, 568, 926
BstACI	GRCGYC	1 cut(s)	307
BstBAI	YACGTR	1 cut(s)	868
BstBI	TTCGAA	1 cut(s)	1118
BstC8I	GCNNGC	3 cut(s)	295, 876, 985
BstDEI	CTNAG	8 cut(s)	702, 941, 969, 1179, 1271, 1411, 1786, 1851
BstDSI	CCRYGG	1 cut(s)	636
BstF5I	GGATG	3 cut(s)	68, 1643, 2060
BstKTI	GATC	9 cut(s)	160, 903, 915, 934, 1219, 1326, 1420, 1770, 1997
BstMAI	GTCTC	8 cut(s)	109, 399, 1182, 1505, 1741, 1795, 1813, 1979
BstMBI	GATC	9 cut(s)	157, 900, 912, 931, 1216, 1323, 1417, 1767, 1994
BstMWI	GCNNNNNNNGC	1 cut(s)	294
BstNI	CCWGG	4 cut(s)	112, 459, 909, 1507
BstNSI	RCATGY	3 cut(s)	416, 528, 1762
BstSCI	CCNGG	4 cut(s)	110, 457, 907, 1505
BstSFI	CTRYAG	1 cut(s)	1478
BstSNI	TACGTA	1 cut(s)	868
BstV1I	GCAGC	5 cut(s)	162, 218, 637, 1464, 1509
BstV2I	GAAGAC	2 cut(s)	853, 1795
BstX2I	RGATCY	2 cut(s)	912, 1994
BstXI	CCANNNNNNTGG	2 cut(s)	1597, 1718
BstYI	RGATCY	2 cut(s)	912, 1994
BsuRI	GGCC	6 cut(s)	462, 627, 683, 1243, 1960, 2022
BtgI	CCRYGG	1 cut(s)	636
BtsCI	GGATG	3 cut(s)	68, 1643, 2060
BtsI	GCAGTG	2 cut(s)	342, 1312
BtsIMutI	CAGTG	7 cut(s)	329, 342, 1116, 1312, 1577, 1716, 1801
Cac8I	GCNNGC	3 cut(s)	295, 876, 985
CaiI	CAGNNNCTG	1 cut(s)	1522
CciI	TCATGA	1 cut(s)	1912
Cfr10I	RCCGGY	1 cut(s)	878
Cfr13I	GGNCC	5 cut(s)	640, 681, 1241, 1250, 2021
Csp6I	GTAC	7 cut(s)	499, 610, 869, 897, 937, 1756, 1773
CspCI	CAANNNNNGTGG	2 cut(s)	271, 306
CviQI	GTAC	7 cut(s)	499, 610, 869, 897, 937, 1756, 1773
DdeI	CTNAG	8 cut(s)	702, 941, 969, 1179, 1271, 1411, 1786, 1851
DpnI	GATC	9 cut(s)	159, 902, 914, 933, 1218, 1325, 1419, 1769, 1996
DpnII	GATC	9 cut(s)	157, 900, 912, 931, 1216, 1323, 1417, 1767, 1994
EaeI	YGGCCR	1 cut(s)	625
Eam1104I	CTCTTC	4 cut(s)	236, 545, 568, 926
EarI	CTCTTC	4 cut(s)	236, 545, 568, 926
EciI	GGCGGA	1 cut(s)	1368
Ecl136II	GAGCTC	1 cut(s)	355
Eco105I	TACGTA	1 cut(s)	868
Eco130I	CCWWGG	3 cut(s)	636, 1030, 2024
Eco147I	AGGCCT	2 cut(s)	462, 1960
Eco24I	GRGCYC	1 cut(s)	357
Eco31I	GGTCTC	4 cut(s)	109, 399, 1182, 1979
Eco32I	GATATC	1 cut(s)	1885
Eco47I	GGWCC	2 cut(s)	640, 1250
Eco53kI	GAGCTC	1 cut(s)	355
Eco57I	CTGAAG	2 cut(s)	877, 1988
Eco88I	CYCGRG	1 cut(s)	555
EcoICRI	GAGCTC	1 cut(s)	355
EcoO109I	RGGNCCY	1 cut(s)	1241
EcoRII	CCWGG	4 cut(s)	110, 457, 907, 1505
EcoRV	GATATC	1 cut(s)	1885
EcoT14I	CCWWGG	3 cut(s)	636, 1030, 2024
EcoT22I	ATGCAT	1 cut(s)	444
EcoT38I	GRGCYC	1 cut(s)	357
ErhI	CCWWGG	3 cut(s)	636, 1030, 2024
FalI	AAGNNNNNCTT	2 cut(s)	468, 500
FaqI	GGGAC	3 cut(s)	178, 1058, 1903
FauNDI	CATATG	1 cut(s)	1498
Fnu4HI	GCNGC	5 cut(s)	176, 207, 651, 1478, 1523
FokI	GGATG	3 cut(s)	75, 1630, 2047
FriOI	GRGCYC	1 cut(s)	357
Fsp4HI	GCNGC	5 cut(s)	176, 207, 651, 1478, 1523
FspBI	CTAG	9 cut(s)	50, 294, 662, 710, 786, 1053, 1166, 1604, 1956
GluI	GCNGC	5 cut(s)	176, 207, 651, 1478, 1523
GsaI	CCCAGC	2 cut(s)	747, 1477
GsuI	CTGGAG	2 cut(s)	133, 1777
HaeIII	GGCC	6 cut(s)	462, 627, 683, 1243, 1960, 2022
HapII	CCGG	3 cut(s)	238, 516, 879
Hin1I	GRCGYC	1 cut(s)	307
HincII	GTYRAC	1 cut(s)	513
HindII	GTYRAC	1 cut(s)	513
HindIII	AAGCTT	3 cut(s)	286, 482, 1544
HinfI	GANTC	8 cut(s)	107, 596, 724, 1162, 1574, 1583, 1916, 2090
HpaI	GTTAAC	1 cut(s)	513
HpaII	CCGG	3 cut(s)	238, 516, 879
HphI	GGTGA	6 cut(s)	793, 893, 1300, 1414, 1578, 1733
Hpy166II	GTNNAC	2 cut(s)	513, 1724
Hpy188III	TCNNGA	4 cut(s)	238, 1037, 1405, 1913
Hpy8I	GTNNAC	2 cut(s)	513, 1724
Hpy99I	CGWCG	2 cut(s)	309, 316
HpyAV	CCTTC	5 cut(s)	914, 1232, 1411, 1470, 1750
HpyCH4III	ACNGT	3 cut(s)	1111, 1150, 2053
HpyCH4IV	ACGT	4 cut(s)	307, 738, 867, 964
HpyF10VI	GCNNNNNNNGC	1 cut(s)	294
HpyF3I	CTNAG	8 cut(s)	702, 941, 969, 1179, 1271, 1411, 1786, 1851
HpySE526I	ACGT	4 cut(s)	307, 738, 867, 964
Hsp92I	GRCGYC	1 cut(s)	307
Kpn2I	TCCGGA	1 cut(s)	237
KpnI	GGTACC	1 cut(s)	940
KspAI	GTTAAC	1 cut(s)	513
Kzo9I	GATC	9 cut(s)	157, 900, 912, 931, 1216, 1323, 1417, 1767, 1994
LguI	GCTCTTC	1 cut(s)	568
LmnI	GCTCC	2 cut(s)	352, 717
Lsp1109I	GCAGC	5 cut(s)	162, 218, 637, 1464, 1509
LweI	GCATC	4 cut(s)	696, 1065, 1080, 1828
MaeI	CTAG	9 cut(s)	50, 294, 662, 710, 786, 1053, 1166, 1604, 1956
MaeII	ACGT	4 cut(s)	307, 738, 867, 964
MaeIII	GTNAC	7 cut(s)	340, 550, 781, 972, 1111, 1453, 1501
MalI	GATC	9 cut(s)	159, 902, 914, 933, 1218, 1325, 1419, 1769, 1996
MboI	GATC	9 cut(s)	157, 900, 912, 931, 1216, 1323, 1417, 1767, 1994
MfeI	CAATTG	1 cut(s)	1704
MflI	RGATCY	2 cut(s)	912, 1994
MhlI	GDGCHC	2 cut(s)	8, 357
MlyI	GAGTC	7 cut(s)	605, 718, 1171, 1568, 1577, 1925, 2099
MmeI	TCCRAC	3 cut(s)	40, 335, 1962
Mph1103I	ATGCAT	1 cut(s)	444
MroI	TCCGGA	1 cut(s)	237
MseI	TTAA	5 cut(s)	512, 587, 1158, 1566, 2103
MslI	CAYNNNNRTG	5 cut(s)	347, 368, 879, 1731, 1911
MspA1I	CMGCKG	2 cut(s)	1415, 1477
MspI	CCGG	3 cut(s)	238, 516, 879
MspR9I	CCNGG	4 cut(s)	112, 459, 909, 1507
MunI	CAATTG	1 cut(s)	1704
Mva1269I	GAATGC	2 cut(s)	789, 1861
MvaI	CCWGG	4 cut(s)	112, 459, 909, 1507
MwoI	GCNNNNNNNGC	1 cut(s)	294
NcoI	CCATGG	1 cut(s)	636
NdeI	CATATG	1 cut(s)	1498
NdeII	GATC	9 cut(s)	157, 900, 912, 931, 1216, 1323, 1417, 1767, 1994
NheI	GCTAGC	1 cut(s)	293
NlaIV	GGNNCC	2 cut(s)	938, 1100
NmeAIII	GCCGAG	1 cut(s)	603
NmuCI	GTSAC	5 cut(s)	340, 781, 1111, 1453, 1501
NsiI	ATGCAT	1 cut(s)	444
NspI	RCATGY	3 cut(s)	416, 528, 1762
NspV	TTCGAA	1 cut(s)	1118
OliI	CACNNNNGTG	1 cut(s)	879
PaeR7I	CTCGAG	1 cut(s)	555
PagI	TCATGA	1 cut(s)	1912
PceI	AGGCCT	2 cut(s)	462, 1960
PciI	ACATGT	3 cut(s)	412, 524, 1758
PciSI	GCTCTTC	1 cut(s)	568
PcsI	WCGNNNNNNNCGW	2 cut(s)	802, 864
PctI	GAATGC	2 cut(s)	789, 1861
PfeI	GAWTC	1 cut(s)	107
PflMI	CCANNNNNTGG	1 cut(s)	1036
PfoI	TCCNGGA	1 cut(s)	110
PkrI	GCNGC	5 cut(s)	177, 208, 652, 1479, 1524
PleI	GAGTC	7 cut(s)	604, 718, 1170, 1568, 1577, 1924, 2098
PpsI	GAGTC	7 cut(s)	604, 718, 1170, 1568, 1577, 1924, 2098
Ppu21I	YACGTR	1 cut(s)	868
PscI	ACATGT	3 cut(s)	412, 524, 1758
PsiI	TTATAA	1 cut(s)	1044
Psp124BI	GAGCTC	1 cut(s)	357
Psp6I	CCWGG	4 cut(s)	110, 457, 907, 1505
PspFI	CCCAGC	2 cut(s)	743, 1473
PspGI	CCWGG	4 cut(s)	110, 457, 907, 1505
PspN4I	GGNNCC	2 cut(s)	938, 1100
PspPI	GGNCC	5 cut(s)	640, 681, 1241, 1250, 2021
PspXI	VCTCGAGB	1 cut(s)	555
PstI	CTGCAG	1 cut(s)	1482
PstNI	CAGNNNCTG	1 cut(s)	1522
PsuI	RGATCY	2 cut(s)	912, 1994
PvuII	CAGCTG	2 cut(s)	1415, 1477
RsaI	GTAC	7 cut(s)	500, 611, 870, 898, 938, 1757, 1774
RsaNI	GTAC	7 cut(s)	499, 610, 869, 897, 937, 1756, 1773
RseI	CAYNNNNRTG	5 cut(s)	347, 368, 879, 1731, 1911
SacI	GAGCTC	1 cut(s)	357
SapI	GCTCTTC	1 cut(s)	568
SaqAI	TTAA	5 cut(s)	512, 587, 1158, 1566, 2103
SatI	GCNGC	5 cut(s)	176, 207, 651, 1478, 1523
Sau3AI	GATC	9 cut(s)	157, 900, 912, 931, 1216, 1323, 1417, 1767, 1994
Sau96I	GGNCC	5 cut(s)	640, 681, 1241, 1250, 2021
SchI	GAGTC	7 cut(s)	605, 718, 1171, 1568, 1577, 1925, 2099
ScrFI	CCNGG	4 cut(s)	112, 459, 909, 1507
SduI	GDGCHC	2 cut(s)	8, 357
SfaNI	GCATC	4 cut(s)	696, 1065, 1080, 1828
SfcI	CTRYAG	1 cut(s)	1478
Sfr274I	CTCGAG	1 cut(s)	555
SfuI	TTCGAA	1 cut(s)	1118
SgrAI	CRCCGGYG	1 cut(s)	878
SinI	GGWCC	2 cut(s)	640, 1250
SlaI	CTCGAG	1 cut(s)	555
SmiMI	CAYNNNNRTG	5 cut(s)	347, 368, 879, 1731, 1911
SmlI	CTYRAG	3 cut(s)	555, 1541, 1929
SmoI	CTYRAG	3 cut(s)	555, 1541, 1929
SnaBI	TACGTA	1 cut(s)	868
SseBI	AGGCCT	2 cut(s)	462, 1960
SsiI	CCGC	2 cut(s)	981, 1379
SspMI	CTAG	9 cut(s)	50, 294, 662, 710, 786, 1053, 1166, 1604, 1956
SstI	GAGCTC	1 cut(s)	357
StuI	AGGCCT	2 cut(s)	462, 1960
StyD4I	CCNGG	4 cut(s)	110, 457, 907, 1505
StyI	CCWWGG	3 cut(s)	636, 1030, 2024
TaaI	ACNGT	3 cut(s)	1111, 1150, 2053
TaiI	ACGT	4 cut(s)	310, 741, 870, 967
TaqI	TCGA	7 cut(s)	269, 556, 566, 599, 1118, 1833, 1887
TfiI	GAWTC	1 cut(s)	107
Tru1I	TTAA	5 cut(s)	512, 587, 1158, 1566, 2103
Tru9I	TTAA	5 cut(s)	512, 587, 1158, 1566, 2103
TscAI	CASTG	7 cut(s)	336, 349, 1116, 1312, 1584, 1723, 1801
TseFI	GTSAC	5 cut(s)	340, 781, 1111, 1453, 1501
TseI	GCWGC	5 cut(s)	175, 206, 650, 1477, 1522
Tsp45I	GTSAC	5 cut(s)	340, 781, 1111, 1453, 1501
TspDTI	ATGAA	7 cut(s)	28, 190, 913, 1248, 1732, 1795, 2049
TspRI	CASTG	7 cut(s)	336, 349, 1116, 1312, 1584, 1723, 1801
Van91I	CCANNNNNTGG	1 cut(s)	1036
VpaK11BI	GGWCC	2 cut(s)	640, 1250
XapI	RAATTY	1 cut(s)	1974
XceI	RCATGY	3 cut(s)	416, 528, 1762
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1946
XhoI	CTCGAG	1 cut(s)	555
XspI	CTAG	9 cut(s)	50, 294, 662, 710, 786, 1053, 1166, 1604, 1956
ZraI	GACGTC	1 cut(s)	308
Zsp2I	ATGCAT	1 cut(s)	444

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.