Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0001860

Physical Location & Seq

Genomic Coordinates Reverse (-)

63268798 .. 63273346

Gene Structure 4549 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG416900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1959 bp

ATGATCATCAGGTTGATATTGCTTCTGGTGTTTGTTGGATGGCTCACAGTTTGGATTATGGTGCCAACAAAAACTTACAAATATACCTGGAAACCCAACCTTGAAGCCAATCTCACTTCAACTTATTTTGGAGTGCAAGGGACAAATCTGCTGCTTTTCGCTTTCCCAATGATGTTCGTAGCAGCCTTGAGCTGTGTTTATCTTCATCTAGTTCAGAAAAAATCACAGAACTCCAACGAGATCAGGTCGTCGGTTGCTGCTGGCTTCTGGAGACGTCCGGTGGTTGTAACGGCTCCTCTGGGGGTCGTCACGGCGATGGAGCTAGGGTTTGGGGTGATGTTTATTTCACTCTTGGTTTGGTCTCTAGCTAACTACTTGATTACCAGCTTCGGCAACCTCCATATGCATATGAATATGATGAGCATGGATAAAGTATGGCAAAGCAAGTTTCGAAGTGTATCGTTGAGACTTGGGTACATTGGGAACATATGCTGGGCGTTTCTCTTCTTTCCTGTGACTCGAAGCTCTTCGATTTTACACATGTTTGGGCTCACATCGGAGTCGAGTATAAAGTACCATATTTGGCTTGGCCATCTCTCCATGCTTCTATTTTCTGTACACACCGTAGGCTTCATCATCTACTGGGGCATGACTCATCAAATGGCTGAAATGCTAGAATGGAGCTCGACTTATGTATCAAACGTAGCTGGAGAGATTGCAATTGTGTTTGCAATGGCAATGTGGGTGACAAGCATTCCTCGTGTCAGACGGAAAATGTTTGAAGTATTTTTCTATACGCACCAGCTATACCCACTCTATATCTTGTTCTACGTATTACATGTTGGTGCTTCCTACTTCTGTATGATCCTTCCCGGAATCTTCCTCTTTGTCATTGATCGATACTTGAGATTTTTACAGTCTTCCCGACACGCTGCTTTAGTCTCAGCACGGGTTCTACCTTGTGAAACAATTGAGCTCAACTTCTCCACGAACAAAGGATTGGATTATAATCCTACTAGCATCTTGTTCGTCAATGTGCCTAGCATATCAAAGTTGCAATGGCACCCATTTACAGTGAATTCAAACTCTAACATGGAGGCGGACAAAATAAGTGTTGTGATTAAGAGTTTAGGAAGTTGGTCTCAAAAGCTTTATAAGCAACTGGCTTCTAATTCGGTGGAGCATATCCAAGTTTCTGTTGAAGGACCTTATGGACCTACTTCATCTCATTTTATGAGGCACAAGGGTTTGGTGATGGTAAGTGGAGGCAGTGGAATTACTCCTATGATTTCCATAATCCGAGAAATTATTTTCCAAAGCACTAAACCCGACTGCCATGTTCCAAGTATACGGCTGATTTGTGCATTCAAGAACTCAGCTGATCTCTCACTGCTGCAACTATTGCTTCCACTTTCTGGCACGCCTTCTGACCTTACCCAGATACAATTGCAAATAGAAGCCTATGTTACAAGGGAGACAGAGCAGCAGCCTCCATCTTCCCAAAAGCCATCCCAAACTTTATGGTTTAAGCCAAACCCATTGGATTTACCGATTTCTGGTGTTCTAGGTCCAAAAAGTTGGTTATGGCTTGCTACTATTATCTCGTCCTCATTTGTCTTATTTCTCATTATTTTGGGCATGGTCACTCGTTTCTATATATACCCGATTGACCACAACACTGGTGATAGTTACCATTACTCCTTCACTTGCCTTTGGTACATGTTTTTGGTCTGTGCCTCCATTTTTATAGTCTCTAGTACAGTTTTCATCTGGTGCAAGAACCAAAATGCCATGGAAAGAAATCAAATTCAGAATATAGAAGTACCCACAGAAACAATTGATGATAGAGAACTTGAAAGCTTTCCCCTTCATCATGAGTCCCTGATTGCTCAAGCTACCCAGGTGCATTATGGAACAAGGCCTGATCTCAAGAGTAAGTTAAAGTTAACCAAGTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000293 GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0016491 GO:0016722 GO:0016723 GO:0055114

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NAD_binding_6

Protein Analysis

652

Amino Acids

74.29

Weight (kDa)

9.12

Isoelectric Point (pI)

42.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ferric_reduct	PF01794	157 - 276	1.2e-18	Ferric reductase like transmembrane component
FAD_binding_8	PF08022	313 - 408	4.9e-23	FAD-binding domain
NAD_binding_6	PF08030	416 - 645	2.5e-14	Ferric reductase NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001860)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G23980 AT5G23990 AT5G23990 AT5G23990
fragaria_vesca	FvH4_7g30120 FvH4_7g30120 FvH4_7g30141
malus_domestica	MD01G1207200.v1.1 MD07G1278100.v1.1
prunus_persica	Prupe.2G299900_v2.0.a1
pyrus_communis	pycom07g25310
rosa_chinensis	RchiOBHm_Chr1g0378121 RchiOBHm_Chr1g0378131 RchiOBHm_Chr1g0378151 RchiOBHm_Chr1g0378171
rosa_laevigata	RLG00000026465 RLG00000026467 RLG00000026469 RLG00000026470
rosa_multiflora	Rmu_sc0000625.1_g000007 Rmu_sc0000625.1_g000009 Rmu_sc0001465.1_g000007 Rmu_sc0001465.1_g000010
rosa_roxburghii	Rroxscaffold_156G00440270 Rroxscaffold_4G00280700 Rroxscaffold_4G00280710 Rroxscaffold_4G00280730 Rroxscaffold_4G00280760
rosa_rugosa	Rorug01G0406500 Rorug01G0406700
rosa_samantha	Rh1AG423000 Rh1AG423100 Rh1AG423300 Rh1BG385300 Rh1BG385500 Rh1BG385800 Rh1CG399300 Rh1CG399500 Rh1CG399600 Rh1DG416500 Rh1DG416700 Rh1DG416900
rosa_wichuraiana	Rw1G037390 Rw1G037400 Rw1G037420 Rw1G037430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1008, 1155
AatII	GACGTC	1 cut(s)	277
AccB1I	GGYRCC	2 cut(s)	61, 1062
AccB7I	CCANNNNNTGG	1 cut(s)	1415
AccI	GTMKAC	1 cut(s)	1348
AciI	CCGC	1 cut(s)	1100
AclWI	GGATC	1 cut(s)	859
AcoI	YGGCCR	1 cut(s)	589
AcsI	RAATTY	2 cut(s)	1078, 1806
AcyI	GRCGYC	1 cut(s)	274
AfaI	GTAC	6 cut(s)	476, 575, 618, 1718, 1759, 1824
AfiI	CCNNNNNNNGG	2 cut(s)	1415, 1556
AflIII	ACRYGT	3 cut(s)	540, 838, 1719
AgsI	TTSAA	7 cut(s)	104, 120, 782, 1083, 1202, 1369, 1856
AjnI	CCWGG	2 cut(s)	86, 1899
AjuI	GAANNNNNNNTTGG	2 cut(s)	983, 1015
Alw21I	GWGCWC	2 cut(s)	686, 978
Alw26I	GTCTC	7 cut(s)	265, 366, 460, 946, 1146, 1469, 1756
AlwI	GGATC	1 cut(s)	859
AoxI	GGCC	2 cut(s)	589, 1919
ApeKI	GCWGC	7 cut(s)	151, 182, 257, 932, 1393, 1483, 1486
ApoI	RAATTY	2 cut(s)	1078, 1806
Asp700I	GAANNNNTTC	2 cut(s)	526, 1860
AspS9I	GGNCC	3 cut(s)	1205, 1214, 1568
AsuC2I	CCSGG	1 cut(s)	873
AsuHPI	GGTGA	4 cut(s)	346, 757, 1264, 1694
AsuII	TTCGAA	1 cut(s)	451
AvaII	GGWCC	3 cut(s)	1205, 1214, 1568
BaeI	ACNNNNGTAYC	2 cut(s)	678, 711
BalI	TGGCCA	1 cut(s)	591
BanI	GGYRCC	2 cut(s)	61, 1062
BanII	GRGCYC	3 cut(s)	552, 686, 978
BauI	CACGAG	1 cut(s)	759
BbsI	GAAGAC	1 cut(s)	912
Bbv12I	GWGCWC	2 cut(s)	686, 978
BbvI	GCAGC	7 cut(s)	138, 194, 244, 919, 1380, 1495, 1498
BccI	CCATC	6 cut(s)	33, 310, 600, 1249, 1501, 1516
BceAI	ACGGC	3 cut(s)	306, 327, 1367
BcgI	CGANNNNNNTGC	2 cut(s)	1009, 1043
BciT130I	CCWGG	2 cut(s)	88, 1901
BclI	TGATCA	1 cut(s)	3
BcnI	CCSGG	1 cut(s)	873
BcoDI	GTCTC	7 cut(s)	265, 366, 460, 946, 1146, 1469, 1756
BfaI	CTAG	8 cut(s)	209, 323, 365, 674, 1017, 1041, 1565, 1755
BisI	GCNGC	7 cut(s)	152, 183, 258, 933, 1394, 1484, 1487
BlsI	GCNGC	7 cut(s)	153, 184, 259, 934, 1395, 1485, 1488
Bme1390I	CCNGG	3 cut(s)	88, 873, 1901
Bme18I	GGWCC	3 cut(s)	1205, 1214, 1568
BmgT120I	GGNCC	3 cut(s)	1205, 1214, 1568
BmiI	GGNNCC	3 cut(s)	63, 294, 1064
BmrFI	CCNGG	3 cut(s)	88, 873, 1901
BmrI	ACTGGG	1 cut(s)	652
BmsI	GCATC	1 cut(s)	1029
BmuI	ACTGGG	1 cut(s)	652
BpiI	GAAGAC	1 cut(s)	912
BpmI	CTGGAG	2 cut(s)	289, 729
Bpu14I	TTCGAA	1 cut(s)	451
BpuEI	CTTGAG	4 cut(s)	208, 925, 1875, 1913
BpuMI	CCSGG	1 cut(s)	873
Bsa29I	ATCGAT	1 cut(s)	898
BsaAI	YACGTR	1 cut(s)	832
BsaBI	GATNNNNATC	1 cut(s)	1008
BsaHI	GRCGYC	1 cut(s)	274
BsaI	GGTCTC	2 cut(s)	366, 1146
BsaJI	CCNNGG	2 cut(s)	1791, 1899
BsaWI	WCCGGW	1 cut(s)	277
BsaXI	ACNNNNNCTCC	4 cut(s)	311, 341, 1682, 1712
Bsc4I	CCNNNNNNNGG	2 cut(s)	1415, 1556
Bse1I	ACTGG	3 cut(s)	647, 1167, 1684
Bse3DI	GCAATG	3 cut(s)	738, 744, 1064
Bse8I	GATNNNNATC	1 cut(s)	1008
BseBI	CCWGG	2 cut(s)	88, 1901
BseCI	ATCGAT	1 cut(s)	898
BseDI	CCNNGG	2 cut(s)	1791, 1899
BseGI	GGATG	2 cut(s)	44, 1508
BseJI	GATNNNNATC	1 cut(s)	1008
BseLI	CCNNNNNNNGG	2 cut(s)	1415, 1556
BseMI	GCAATG	3 cut(s)	738, 744, 1064
BseMII	CTCAG	2 cut(s)	957, 1389
BseNI	ACTGG	3 cut(s)	647, 1167, 1684
BseRI	GAGGAG	1 cut(s)	285
BseXI	GCAGC	7 cut(s)	138, 194, 244, 919, 1380, 1495, 1498
BseYI	CCCAGC	1 cut(s)	492
BshFI	GGCC	2 cut(s)	591, 1921
BshNI	GGYRCC	2 cut(s)	61, 1062
BshVI	ATCGAT	1 cut(s)	898
BsiHKAI	GWGCWC	2 cut(s)	686, 978
BsiSI	CCGG	2 cut(s)	278, 873
BslFI	GGGAC	2 cut(s)	154, 1864
BslI	CCNNNNNNNGG	2 cut(s)	1415, 1556
BsmAI	GTCTC	7 cut(s)	265, 366, 460, 946, 1146, 1469, 1756
BsmBI	CGTCTC	1 cut(s)	265
BsmFI	GGGAC	2 cut(s)	154, 1864
BsmI	GAATGC	2 cut(s)	753, 1364
BsnI	GGCC	2 cut(s)	591, 1921
Bso31I	GGTCTC	2 cut(s)	366, 1146
Bsp119I	TTCGAA	1 cut(s)	451
Bsp1286I	GDGCHC	3 cut(s)	552, 686, 978
Bsp1407I	TGTACA	1 cut(s)	616
Bsp143I	GATC	6 cut(s)	3, 240, 864, 895, 1381, 1924
Bsp19I	CCATGG	1 cut(s)	1791
BspACI	CCGC	1 cut(s)	1100
BspANI	GGCC	2 cut(s)	591, 1921
BspCNI	CTCAG	2 cut(s)	956, 1388
BspDI	ATCGAT	1 cut(s)	898
BspHI	TCATGA	1 cut(s)	1873
BspLI	GGNNCC	3 cut(s)	63, 294, 1064
BspPI	GGATC	1 cut(s)	859
BspQI	GCTCTTC	1 cut(s)	532
BspT104I	TTCGAA	1 cut(s)	451
BspT107I	GGYRCC	2 cut(s)	61, 1062
BspTNI	GGTCTC	2 cut(s)	366, 1146
BsrDI	GCAATG	3 cut(s)	738, 744, 1064
BsrGI	TGTACA	1 cut(s)	616
BsrI	ACTGG	3 cut(s)	647, 1167, 1684
BssECI	CCNNGG	2 cut(s)	1791, 1899
BssMI	GATC	6 cut(s)	3, 240, 864, 895, 1381, 1924
BssNAI	GTATAC	1 cut(s)	1349
BssNI	GRCGYC	1 cut(s)	274
BssSI	CACGAG	1 cut(s)	759
BssT1I	CCWWGG	1 cut(s)	1791
Bst1107I	GTATAC	1 cut(s)	1349
Bst2BI	CACGAG	1 cut(s)	759
Bst2UI	CCWGG	2 cut(s)	88, 1901
Bst4CI	ACNGT	5 cut(s)	49, 625, 918, 1075, 1762
Bst6I	CTCTTC	2 cut(s)	509, 532
BstACI	GRCGYC	1 cut(s)	274
BstAPI	GCANNNNNTGC	1 cut(s)	1402
BstAUI	TGTACA	1 cut(s)	616
BstBAI	YACGTR	1 cut(s)	832
BstBI	TTCGAA	1 cut(s)	451
BstC8I	GCNNGC	3 cut(s)	262, 1421, 1590
BstDEI	CTNAG	2 cut(s)	943, 1375
BstDSI	CCRYGG	1 cut(s)	1791
BstF5I	GGATG	2 cut(s)	44, 1508
BstKTI	GATC	6 cut(s)	6, 243, 867, 898, 1384, 1927
BstMAI	GTCTC	7 cut(s)	265, 366, 460, 946, 1146, 1469, 1756
BstMBI	GATC	6 cut(s)	3, 240, 864, 895, 1381, 1924
BstMWI	GCNNNNNNNGC	2 cut(s)	1156, 1402
BstNI	CCWGG	2 cut(s)	88, 1901
BstNSI	RCATGY	3 cut(s)	544, 842, 1723
BstSCI	CCNGG	3 cut(s)	86, 871, 1899
BstSNI	TACGTA	1 cut(s)	832
BstV1I	GCAGC	7 cut(s)	138, 194, 244, 919, 1380, 1495, 1498
BstV2I	GAAGAC	1 cut(s)	912
BstXI	CCANNNNNNTGG	2 cut(s)	1578, 1679
BstZ17I	GTATAC	1 cut(s)	1349
Bsu15I	ATCGAT	1 cut(s)	898
BsuRI	GGCC	2 cut(s)	591, 1921
BsuTUI	ATCGAT	1 cut(s)	898
BtgI	CCRYGG	1 cut(s)	1791
BtgZI	GCGATG	1 cut(s)	329
BtsCI	GGATG	2 cut(s)	44, 1508
BtsI	GCAGTG	2 cut(s)	1276, 1388
BtsIMutI	CAGTG	4 cut(s)	1080, 1276, 1388, 1677
Cac8I	GCNNGC	3 cut(s)	262, 1421, 1590
CciI	TCATGA	1 cut(s)	1873
Cfr13I	GGNCC	3 cut(s)	1205, 1214, 1568
ClaI	ATCGAT	1 cut(s)	898
Csp6I	GTAC	6 cut(s)	475, 574, 617, 1717, 1758, 1823
CviQI	GTAC	6 cut(s)	475, 574, 617, 1717, 1758, 1823
DdeI	CTNAG	2 cut(s)	943, 1375
DpnI	GATC	6 cut(s)	5, 242, 866, 897, 1383, 1926
DpnII	GATC	6 cut(s)	3, 240, 864, 895, 1381, 1924
EaeI	YGGCCR	1 cut(s)	589
Eam1104I	CTCTTC	2 cut(s)	509, 532
EarI	CTCTTC	2 cut(s)	509, 532
EciI	GGCGGA	1 cut(s)	1115
Ecl136II	GAGCTC	2 cut(s)	684, 976
Eco105I	TACGTA	1 cut(s)	832
Eco130I	CCWWGG	1 cut(s)	1791
Eco147I	AGGCCT	1 cut(s)	1921
Eco24I	GRGCYC	3 cut(s)	552, 686, 978
Eco31I	GGTCTC	2 cut(s)	366, 1146
Eco47I	GGWCC	3 cut(s)	1205, 1214, 1568
Eco53kI	GAGCTC	2 cut(s)	684, 976
EcoICRI	GAGCTC	2 cut(s)	684, 976
EcoO109I	RGGNCCY	1 cut(s)	1205
EcoRI	GAATTC	1 cut(s)	1078
EcoRII	CCWGG	2 cut(s)	86, 1899
EcoT14I	CCWWGG	1 cut(s)	1791
EcoT22I	ATGCAT	1 cut(s)	408
EcoT38I	GRGCYC	3 cut(s)	552, 686, 978
ErhI	CCWWGG	1 cut(s)	1791
Esp3I	CGTCTC	1 cut(s)	265
FaqI	GGGAC	2 cut(s)	154, 1864
FauNDI	CATATG	3 cut(s)	402, 408, 488
FbaI	TGATCA	1 cut(s)	3
FblI	GTMKAC	1 cut(s)	1348
Fnu4HI	GCNGC	7 cut(s)	152, 183, 258, 933, 1394, 1484, 1487
FokI	GGATG	2 cut(s)	51, 1495
FriOI	GRGCYC	3 cut(s)	552, 686, 978
Fsp4HI	GCNGC	7 cut(s)	152, 183, 258, 933, 1394, 1484, 1487
FspBI	CTAG	8 cut(s)	209, 323, 365, 674, 1017, 1041, 1565, 1755
GluI	GCNGC	7 cut(s)	152, 183, 258, 933, 1394, 1484, 1487
GsaI	CCCAGC	1 cut(s)	496
GsuI	CTGGAG	2 cut(s)	289, 729
HaeIII	GGCC	2 cut(s)	591, 1921
HapII	CCGG	2 cut(s)	278, 873
Hin1I	GRCGYC	1 cut(s)	274
HincII	GTYRAC	1 cut(s)	1947
HindII	GTYRAC	1 cut(s)	1947
HindIII	AAGCTT	2 cut(s)	1148, 1858
HinfI	GANTC	5 cut(s)	517, 560, 652, 876, 1877
HpaI	GTTAAC	1 cut(s)	1947
HpaII	CCGG	2 cut(s)	278, 873
HphI	GGTGA	4 cut(s)	346, 757, 1264, 1694
Hpy166II	GTNNAC	3 cut(s)	619, 1349, 1947
Hpy188I	TCNGA	6 cut(s)	216, 559, 767, 1301, 1429, 1812
Hpy188III	TCNNGA	5 cut(s)	268, 924, 1369, 1874, 1930
Hpy8I	GTNNAC	3 cut(s)	619, 1349, 1947
Hpy99I	CGWCG	1 cut(s)	253
HpyAV	CCTTC	5 cut(s)	878, 1196, 1434, 1711, 1877
HpyCH4III	ACNGT	5 cut(s)	49, 625, 918, 1075, 1762
HpyCH4IV	ACGT	3 cut(s)	274, 702, 831
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1156, 1402
HpyF3I	CTNAG	2 cut(s)	943, 1375
HpySE526I	ACGT	3 cut(s)	274, 702, 831
Hsp92I	GRCGYC	1 cut(s)	274
Ksp22I	TGATCA	1 cut(s)	3
KspAI	GTTAAC	1 cut(s)	1947
Kzo9I	GATC	6 cut(s)	3, 240, 864, 895, 1381, 1924
LguI	GCTCTTC	1 cut(s)	532
LmnI	GCTCC	4 cut(s)	298, 319, 681, 1180
Lsp1109I	GCAGC	7 cut(s)	138, 194, 244, 919, 1380, 1495, 1498
LweI	GCATC	1 cut(s)	1029
MaeI	CTAG	8 cut(s)	209, 323, 365, 674, 1017, 1041, 1565, 1755
MaeII	ACGT	3 cut(s)	274, 702, 831
MaeIII	GTNAC	7 cut(s)	286, 307, 514, 745, 1465, 1642, 1688
MalI	GATC	6 cut(s)	5, 242, 866, 897, 1383, 1926
MboI	GATC	6 cut(s)	3, 240, 864, 895, 1381, 1924
MboII	GAAGA	6 cut(s)	194, 496, 519, 871, 912, 1488
MfeI	CAATTG	4 cut(s)	720, 969, 1445, 1836
MhlI	GDGCHC	3 cut(s)	552, 686, 978
MlsI	TGGCCA	1 cut(s)	591
MluCI	AATT	9 cut(s)	720, 969, 1078, 1171, 1275, 1305, 1445, 1806, 1836
MluNI	TGGCCA	1 cut(s)	591
MlyI	GAGTC	4 cut(s)	511, 569, 646, 1886
MmeI	TCCRAC	2 cut(s)	16, 258
Mox20I	TGGCCA	1 cut(s)	591
Mph1103I	ATGCAT	1 cut(s)	408
MroXI	GAANNNNTTC	2 cut(s)	526, 1860
MscI	TGGCCA	1 cut(s)	591
MseI	TTAA	4 cut(s)	1122, 1527, 1940, 1946
MslI	CAYNNNNRTG	2 cut(s)	314, 843
Msp20I	TGGCCA	1 cut(s)	591
MspA1I	CMGCKG	1 cut(s)	1379
MspI	CCGG	2 cut(s)	278, 873
MspR9I	CCNGG	3 cut(s)	88, 873, 1901
MunI	CAATTG	4 cut(s)	720, 969, 1445, 1836
Mva1269I	GAATGC	2 cut(s)	753, 1364
MvaI	CCWGG	2 cut(s)	88, 1901
MwoI	GCNNNNNNNGC	2 cut(s)	1156, 1402
NciI	CCSGG	1 cut(s)	873
NcoI	CCATGG	1 cut(s)	1791
NdeI	CATATG	3 cut(s)	402, 408, 488
NdeII	GATC	6 cut(s)	3, 240, 864, 895, 1381, 1924
NlaIV	GGNNCC	3 cut(s)	63, 294, 1064
NmuCI	GTSAC	4 cut(s)	307, 514, 745, 1642
NsiI	ATGCAT	1 cut(s)	408
NspI	RCATGY	3 cut(s)	544, 842, 1723
NspV	TTCGAA	1 cut(s)	451
PagI	TCATGA	1 cut(s)	1873
PceI	AGGCCT	1 cut(s)	1921
PciI	ACATGT	3 cut(s)	540, 838, 1719
PciSI	GCTCTTC	1 cut(s)	532
PctI	GAATGC	2 cut(s)	753, 1364
PdmI	GAANNNNTTC	2 cut(s)	526, 1860
PfeI	GAWTC	1 cut(s)	876
PflMI	CCANNNNNTGG	1 cut(s)	1415
PfoI	TCCNGGA	1 cut(s)	871
PkrI	GCNGC	7 cut(s)	153, 184, 259, 934, 1395, 1485, 1488
PleI	GAGTC	4 cut(s)	511, 568, 646, 1885
PpsI	GAGTC	4 cut(s)	511, 568, 646, 1885
Ppu21I	YACGTR	1 cut(s)	832
PpuMI	RGGWCCY	1 cut(s)	1205
PscI	ACATGT	3 cut(s)	540, 838, 1719
PsiI	TTATAA	2 cut(s)	1008, 1155
Psp124BI	GAGCTC	2 cut(s)	686, 978
Psp5II	RGGWCCY	1 cut(s)	1205
Psp6I	CCWGG	2 cut(s)	86, 1899
PspFI	CCCAGC	1 cut(s)	492
PspGI	CCWGG	2 cut(s)	86, 1899
PspN4I	GGNNCC	3 cut(s)	63, 294, 1064
PspPI	GGNCC	3 cut(s)	1205, 1214, 1568
PspPPI	RGGWCCY	1 cut(s)	1205
PvuII	CAGCTG	1 cut(s)	1379
RsaI	GTAC	6 cut(s)	476, 575, 618, 1718, 1759, 1824
RsaNI	GTAC	6 cut(s)	475, 574, 617, 1717, 1758, 1823
RseI	CAYNNNNRTG	2 cut(s)	314, 843
SacI	GAGCTC	2 cut(s)	686, 978
SapI	GCTCTTC	1 cut(s)	532
SaqAI	TTAA	4 cut(s)	1122, 1527, 1940, 1946
SatI	GCNGC	7 cut(s)	152, 183, 258, 933, 1394, 1484, 1487
Sau3AI	GATC	6 cut(s)	3, 240, 864, 895, 1381, 1924
Sau96I	GGNCC	3 cut(s)	1205, 1214, 1568
SchI	GAGTC	4 cut(s)	511, 569, 646, 1886
ScrFI	CCNGG	3 cut(s)	88, 873, 1901
SduI	GDGCHC	3 cut(s)	552, 686, 978
SfaNI	GCATC	1 cut(s)	1029
SfuI	TTCGAA	1 cut(s)	451
SinI	GGWCC	3 cut(s)	1205, 1214, 1568
SmiMI	CAYNNNNRTG	2 cut(s)	314, 843
SmlI	CTYRAG	4 cut(s)	187, 904, 1890, 1928
SmoI	CTYRAG	4 cut(s)	187, 904, 1890, 1928
SnaBI	TACGTA	1 cut(s)	832
Sse9I	AATT	9 cut(s)	720, 969, 1078, 1171, 1275, 1305, 1445, 1806, 1836
SseBI	AGGCCT	1 cut(s)	1921
SsiI	CCGC	1 cut(s)	1100
SspMI	CTAG	8 cut(s)	209, 323, 365, 674, 1017, 1041, 1565, 1755
SstI	GAGCTC	2 cut(s)	686, 978
StuI	AGGCCT	1 cut(s)	1921
StyD4I	CCNGG	3 cut(s)	86, 871, 1899
StyI	CCWWGG	1 cut(s)	1791
TaaI	ACNGT	5 cut(s)	49, 625, 918, 1075, 1762
TaiI	ACGT	3 cut(s)	277, 705, 834
TaqI	TCGA	6 cut(s)	451, 520, 530, 563, 686, 898
TasI	AATT	9 cut(s)	720, 969, 1078, 1171, 1275, 1305, 1445, 1806, 1836
TatI	WGTACW	2 cut(s)	616, 1757
TfiI	GAWTC	1 cut(s)	876
Tru1I	TTAA	4 cut(s)	1122, 1527, 1940, 1946
Tru9I	TTAA	4 cut(s)	1122, 1527, 1940, 1946
TscAI	CASTG	4 cut(s)	1080, 1276, 1395, 1684
TseFI	GTSAC	4 cut(s)	307, 514, 745, 1642
TseI	GCWGC	7 cut(s)	151, 182, 257, 932, 1393, 1483, 1486
Tsp45I	GTSAC	4 cut(s)	307, 514, 745, 1642
TspDTI	ATGAA	6 cut(s)	194, 425, 622, 1212, 1756, 1859
TspGWI	ACGGA	1 cut(s)	784
TspRI	CASTG	4 cut(s)	1080, 1276, 1395, 1684
Van91I	CCANNNNNTGG	1 cut(s)	1415
VpaK11BI	GGWCC	3 cut(s)	1205, 1214, 1568
XapI	RAATTY	2 cut(s)	1078, 1806
XceI	RCATGY	3 cut(s)	544, 842, 1723
XcmI	CCANNNNNNNNNTGG	2 cut(s)	584, 1907
XmiI	GTMKAC	1 cut(s)	1348
XmnI	GAANNNNTTC	2 cut(s)	526, 1860
XspI	CTAG	8 cut(s)	209, 323, 365, 674, 1017, 1041, 1565, 1755
ZraI	GACGTC	1 cut(s)	275
Zsp2I	ATGCAT	1 cut(s)	408

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.