Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0001860

Physical Location & Seq

Genomic Coordinates Reverse (-)

66598107 .. 66602591

Gene Structure 4485 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG399500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2097 bp

ATGAGCACAAATACAGCAGTTAGGTTCATATTGCTTCTAATGTTTGTTGGATGGCTCATCGTTTGGATTCTGTTGCCAACCAAAGCTTACGGATATTCCTGGAGACCCAACCTACAAGGCAAACTCAACTCAACATATTTCGGAGATAAAGGGACAAATCTGCTGCTTTTCTCGTTCCCAATGATGTTCATAGCAGCTTTGAGTTGTGTTTATCTCCATCTAATTCAGAAGGAGAAATCATCATACTCGACATACTACTCCACAAGCTTTGCTAGCTTCTGGAGGCGTCCGGCGAGTGTGAAAGCTCCACTGGGAATTGTAACTACGATGGAGCTTGGATTCGCTGTAATGTTTGTTGCACTCTTGGTGTGGTCTCTTACCAATTACATACATGTCGGGTTTGCCTACCTCCATAATATGTATAAGAAACCAGTTCCGGGCCTGAAAGAGAAAGAGTGGGAAGCAAAGCTTCATTATGTATCGTACTGGCTTGGCTTAACCGGAAACATATGTCTGGCATTTCTCTTCTTCCCTGTAACTCGAGGCTCTTCGATTTTGGCTCTGGTTGGCTTAACATCGGAGTCGAGTATGAAGTACCATATTTGGCTTGGCCATCTCTCCATGGTTCTATTTGCTGCTCATTCCCTAGGCTACATCATCTTCTGGGCCATCACTCATCAAATGGCTGAGATGCTAGAATGGAGCAAGACTTATGTATCAAACGTAGCTGGGGAGATTGCAATTGTATTTGCAATGGCAATGTGGGTGACTAGCATTCCTCGTGTTAGACGAAAAATGTTTGAACTATTTTTCTACACCCACCAGCTCTACGTTCTCTACATCGTCTTCTACGTACTGCACGCCGGTGCTTTCTCCTTCTGTACAATCCTTCCTGGAATCTTCCTGTTCATCATAGATCGGTACCTGAGATTTTTACAGTCTAATCAACGCGCTGAGTTACTCTCTGCACGCATTTTACCTTGCGAGACTATTGAACTCAACTTCTCCAAGAGCCAAGGCCTGGATTATAATCCCACTAGCATCTTGTTTATCAATGTGCCTAGTGTATCCAAGATGCAGTGGCACCCGTTTACAGTGAATTCGAACTCTAACATGGAGGCAGACAAGCTAAGTGTTGTGATTAAAAGTCTCGGAAGTTGGTCTCAGAAACTTTACCAGCAACTTTCTTCTAATTCTATGGATCATATTCAAGTTTCTGTTGAAGGGCCTTATGGACCTACTTCATCTCATTTCCTAAGGCACAAGGCTCTCGTGATGATTAGTGGAGGCAGTGGAATTACTCCGATGATCTCCATAATCCGAGAAATCATTTTCCAAAGCACCAAACCAGACTGCCATGTTCCGCCTGTTCGGTTTATATGTGCCTTCAAGAACTCAGCTGATCTCACCATGCTACAACTCATGCTTCCAATTTCTATCACCCCTTTTAATTTTACCCAGCTGCAGTTTCAAATTGAAGCATATGTGACCAGGGAGACACACAAGCAGCCTCCATCAGACCCCCACAAGCCTCTCCAAACCATATGGTTTAAGCCAGACCCATTGGACTCGCCCATTTCTTTGGTTCTAGGACAAAACACATGGCTATGGCTTGGTGCTATAGTTTCATCCTCATTTGTCTTATTTCTCTTTGTTTTGGGCATTGTCAATCGTTTTTATATATACCCAATTGACCACAACACTGGTGAACACTACCATGCCTCCTTCATTTGCCTGTGGTACATGTTTTTGATCTGTGCCTCCATTTTCATAGTCTCTAGTGCAGTCTTCCTTTGGTGCAAGAGACAGAACGCCATTGAAGAAGGGAAGCGAACTCAGAATGCGAAATTATCAACATCAACAACTGATATTGAACTTGAGAGTTCTCCCCATAATCATGAGTCCCTGATTGCTCTAGCTACACAAGTGCATTACGGAACTAGGCCTGACCTGAAAAAAATTCTGTTGGAAACCAAAGGATCTGATATTGGAGTGTTGGTTTGTGGCCCAAGGAAGATGAGACATGAGGTTGCCACAGTTTGTTCATCCAGTTTGGCACATAATCTGCACTTTGAGTCCATTAGCTTTAACTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000293 GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0016491 GO:0016722 GO:0016723 GO:0055114

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NAD_binding_6

Protein Analysis

698

Amino Acids

79.52

Weight (kDa)

9.05

Isoelectric Point (pI)

40.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ferric_reduct	PF01794	164 - 284	1.5e-19	Ferric reductase like transmembrane component
FAD_binding_8	PF08022	319 - 415	4.6e-24	FAD-binding domain
NAD_binding_6	PF08030	422 - 681	3.1e-21	Ferric reductase NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001860)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G23980 AT5G23990 AT5G23990 AT5G23990
fragaria_vesca	FvH4_7g30120 FvH4_7g30120 FvH4_7g30141
malus_domestica	MD01G1207200.v1.1 MD07G1278100.v1.1
prunus_persica	Prupe.2G299900_v2.0.a1
pyrus_communis	pycom07g25310
rosa_chinensis	RchiOBHm_Chr1g0378121 RchiOBHm_Chr1g0378131 RchiOBHm_Chr1g0378151 RchiOBHm_Chr1g0378171
rosa_laevigata	RLG00000026465 RLG00000026467 RLG00000026469 RLG00000026470
rosa_multiflora	Rmu_sc0000625.1_g000007 Rmu_sc0000625.1_g000009 Rmu_sc0001465.1_g000007 Rmu_sc0001465.1_g000010
rosa_roxburghii	Rroxscaffold_156G00440270 Rroxscaffold_4G00280700 Rroxscaffold_4G00280710 Rroxscaffold_4G00280730 Rroxscaffold_4G00280760
rosa_rugosa	Rorug01G0406500 Rorug01G0406700
rosa_samantha	Rh1AG423000 Rh1AG423100 Rh1AG423300 Rh1BG385300 Rh1BG385500 Rh1BG385800 Rh1CG399300 Rh1CG399500 Rh1CG399600 Rh1DG416500 Rh1DG416700 Rh1DG416900
rosa_wichuraiana	Rw1G037390 Rw1G037400 Rw1G037420 Rw1G037430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1029
Acc65I	GGTACC	1 cut(s)	921
AccB1I	GGYRCC	2 cut(s)	921, 1083
AccB7I	CCANNNNNTGG	1 cut(s)	1021
AccII	CGCG	1 cut(s)	951
AciI	CCGC	1 cut(s)	1364
AclWI	GGATC	2 cut(s)	1209, 1987
AcoI	YGGCCR	1 cut(s)	610
AcsI	RAATTY	2 cut(s)	1099, 1959
AcyI	GRCGYC	1 cut(s)	286
AfaI	GTAC	6 cut(s)	485, 596, 855, 883, 923, 1742
AfiI	CCNNNNNNNGG	2 cut(s)	437, 1021
AflIII	ACRYGT	2 cut(s)	391, 1743
AgsI	TTSAA	9 cut(s)	803, 995, 1211, 1223, 1390, 1472, 1478, 1820, 1874
AjnI	CCWGG	4 cut(s)	98, 892, 1020, 1490
AleI	CACNNNNGTG	1 cut(s)	864
Alw21I	GWGCWC	1 cut(s)	8
Alw26I	GTCTC	9 cut(s)	97, 378, 980, 1154, 1167, 1490, 1780, 1798, 2014
AlwI	GGATC	2 cut(s)	1209, 1987
Ama87I	CYCGRG	1 cut(s)	540
AoxI	GGCC	7 cut(s)	439, 610, 666, 1018, 1226, 1943, 2005
ApeKI	GCWGC	5 cut(s)	163, 194, 635, 1462, 1507
ApoI	RAATTY	2 cut(s)	1099, 1959
Asp718I	GGTACC	1 cut(s)	921
AspA2I	CCTAGG	1 cut(s)	646
AspLEI	GCGC	1 cut(s)	953
AspS9I	GGNCC	5 cut(s)	439, 666, 1226, 1235, 2006
AsuC2I	CCSGG	1 cut(s)	438
AsuHPI	GGTGA	4 cut(s)	778, 1399, 1432, 1718
AsuII	TTCGAA	1 cut(s)	1103
AsuNHI	GCTAGC	1 cut(s)	272
AvaI	CYCGRG	1 cut(s)	540
AvaII	GGWCC	1 cut(s)	1235
AvrII	CCTAGG	1 cut(s)	646
AxyI	CCTNAGG	1 cut(s)	1256
BaeI	ACNNNNGTAYC	2 cut(s)	699, 732
BalI	TGGCCA	1 cut(s)	612
BanI	GGYRCC	2 cut(s)	921, 1083
BauI	CACGAG	2 cut(s)	780, 1271
BbsI	GAAGAC	2 cut(s)	838, 1780
Bbv12I	GWGCWC	1 cut(s)	8
BbvI	GCAGC	5 cut(s)	150, 206, 622, 1449, 1519
BccI	CCATC	6 cut(s)	45, 225, 322, 621, 677, 1522
BciT130I	CCWGG	4 cut(s)	100, 894, 1022, 1492
BciVI	GTATCC	1 cut(s)	1078
BcnI	CCSGG	1 cut(s)	438
BcoDI	GTCTC	9 cut(s)	97, 378, 980, 1154, 1167, 1490, 1780, 1798, 2014
BfmI	CTRYAG	2 cut(s)	1463, 1620
BfuI	GTATCC	1 cut(s)	1078
BisI	GCNGC	5 cut(s)	164, 195, 636, 1463, 1508
BlnI	CCTAGG	1 cut(s)	646
BlsI	GCNGC	5 cut(s)	165, 196, 637, 1464, 1509
Bme1390I	CCNGG	5 cut(s)	100, 438, 894, 1022, 1492
Bme18I	GGWCC	1 cut(s)	1235
BmeT110I	CYCGRG	1 cut(s)	540
BmgT120I	GGNCC	5 cut(s)	439, 666, 1226, 1235, 2006
BmiI	GGNNCC	2 cut(s)	923, 1085
BmrFI	CCNGG	5 cut(s)	100, 438, 894, 1022, 1492
BmrI	ACTGGG	1 cut(s)	320
BmsI	GCATC	3 cut(s)	681, 1050, 1065
BmtI	GCTAGC	1 cut(s)	276
BmuI	ACTGGG	1 cut(s)	320
BpiI	GAAGAC	2 cut(s)	838, 1780
BplI	GAGNNNNNCTC	2 cut(s)	947, 979
BpmI	CTGGAG	2 cut(s)	121, 301
Bpu14I	TTCGAA	1 cut(s)	1103
BpuEI	CTTGAG	1 cut(s)	1898
BpuMI	CCSGG	1 cut(s)	438
BsaAI	YACGTR	1 cut(s)	853
BsaBI	GATNNNNATC	1 cut(s)	1029
BsaHI	GRCGYC	1 cut(s)	286
BsaI	GGTCTC	3 cut(s)	97, 378, 1167
BsaJI	CCNNGG	5 cut(s)	621, 646, 1015, 1491, 2009
BsaWI	WCCGGW	1 cut(s)	500
BsaXI	ACNNNNNCTCC	4 cut(s)	1706, 1736, 1983, 2013
Bsc4I	CCNNNNNNNGG	2 cut(s)	437, 1021
Bse118I	RCCGGY	1 cut(s)	863
Bse1I	ACTGG	6 cut(s)	315, 431, 491, 1708, 2049, 2096
Bse21I	CCTNAGG	1 cut(s)	1256
Bse3DI	GCAATG	2 cut(s)	759, 765
Bse8I	GATNNNNATC	1 cut(s)	1029
BseBI	CCWGG	4 cut(s)	100, 894, 1022, 1492
BseDI	CCNNGG	5 cut(s)	621, 646, 1015, 1491, 2009
BseGI	GGATG	3 cut(s)	56, 1628, 2045
BseJI	GATNNNNATC	1 cut(s)	1029
BseLI	CCNNNNNNNGG	2 cut(s)	437, 1021
BseMI	GCAATG	2 cut(s)	759, 765
BseMII	CTCAG	6 cut(s)	678, 917, 945, 1178, 1410, 1850
BseNI	ACTGG	6 cut(s)	315, 431, 491, 1708, 2049, 2096
BseXI	GCAGC	5 cut(s)	150, 206, 622, 1449, 1519
BseYI	CCCAGC	2 cut(s)	728, 1458
BsgI	GTGCAG	4 cut(s)	842, 951, 1803, 2051
Bsh1236I	CGCG	1 cut(s)	951
BshFI	GGCC	7 cut(s)	441, 612, 668, 1020, 1228, 1945, 2007
BshNI	GGYRCC	2 cut(s)	921, 1083
BsiHKAI	GWGCWC	1 cut(s)	8
BsiHKCI	CYCGRG	1 cut(s)	540
BsiSI	CCGG	4 cut(s)	290, 437, 501, 864
BslFI	GGGAC	2 cut(s)	166, 1888
BslI	CCNNNNNNNGG	2 cut(s)	437, 1021
BsmAI	GTCTC	9 cut(s)	97, 378, 980, 1154, 1167, 1490, 1780, 1798, 2014
BsmFI	GGGAC	2 cut(s)	166, 1888
BsmI	GAATGC	2 cut(s)	774, 1846
BsnI	GGCC	7 cut(s)	441, 612, 668, 1020, 1228, 1945, 2007
Bso31I	GGTCTC	3 cut(s)	97, 378, 1167
BsoBI	CYCGRG	1 cut(s)	540
Bsp119I	TTCGAA	1 cut(s)	1103
Bsp1286I	GDGCHC	1 cut(s)	8
Bsp1407I	TGTACA	1 cut(s)	881
Bsp143I	GATC	6 cut(s)	916, 1201, 1308, 1402, 1752, 1979
Bsp19I	CCATGG	1 cut(s)	621
BspACI	CCGC	1 cut(s)	1364
BspANI	GGCC	7 cut(s)	441, 612, 668, 1020, 1228, 1945, 2007
BspCNI	CTCAG	6 cut(s)	679, 918, 946, 1177, 1409, 1849
BspFNI	CGCG	1 cut(s)	951
BspHI	TCATGA	1 cut(s)	1897
BspLI	GGNNCC	2 cut(s)	923, 1085
BspMAI	CTGCAG	1 cut(s)	1467
BspOI	GCTAGC	1 cut(s)	276
BspPI	GGATC	2 cut(s)	1209, 1987
BspQI	GCTCTTC	1 cut(s)	553
BspT104I	TTCGAA	1 cut(s)	1103
BspT107I	GGYRCC	2 cut(s)	921, 1083
BspTNI	GGTCTC	3 cut(s)	97, 378, 1167
BsrDI	GCAATG	2 cut(s)	759, 765
BsrFI	RCCGGY	1 cut(s)	863
BsrGI	TGTACA	1 cut(s)	881
BsrI	ACTGG	6 cut(s)	315, 431, 491, 1708, 2049, 2096
BssAI	RCCGGY	1 cut(s)	863
BssECI	CCNNGG	5 cut(s)	621, 646, 1015, 1491, 2009
BssMI	GATC	6 cut(s)	916, 1201, 1308, 1402, 1752, 1979
BssNI	GRCGYC	1 cut(s)	286
BssSI	CACGAG	2 cut(s)	780, 1271
BssT1I	CCWWGG	4 cut(s)	621, 646, 1015, 2009
Bst2BI	CACGAG	2 cut(s)	780, 1271
Bst2UI	CCWGG	4 cut(s)	100, 894, 1022, 1492
Bst4CI	ACNGT	3 cut(s)	939, 1096, 2038
Bst6I	CTCTTC	2 cut(s)	530, 553
BstACI	GRCGYC	1 cut(s)	286
BstAUI	TGTACA	1 cut(s)	881
BstBAI	YACGTR	1 cut(s)	853
BstBI	TTCGAA	1 cut(s)	1103
BstC8I	GCNNGC	3 cut(s)	274, 861, 970
BstDEI	CTNAG	8 cut(s)	687, 926, 954, 1130, 1164, 1256, 1396, 1836
BstDSI	CCRYGG	1 cut(s)	621
BstF5I	GGATG	3 cut(s)	56, 1628, 2045
BstFNI	CGCG	1 cut(s)	951
BstHHI	GCGC	1 cut(s)	953
BstKTI	GATC	6 cut(s)	919, 1204, 1311, 1405, 1755, 1982
BstMAI	GTCTC	9 cut(s)	97, 378, 980, 1154, 1167, 1490, 1780, 1798, 2014
BstMBI	GATC	6 cut(s)	916, 1201, 1308, 1402, 1752, 1979
BstMWI	GCNNNNNNNGC	1 cut(s)	273
BstNI	CCWGG	4 cut(s)	100, 894, 1022, 1492
BstNSI	RCATGY	2 cut(s)	395, 1747
BstSCI	CCNGG	5 cut(s)	98, 436, 892, 1020, 1490
BstSFI	CTRYAG	2 cut(s)	1463, 1620
BstSNI	TACGTA	1 cut(s)	853
BstUI	CGCG	1 cut(s)	951
BstV1I	GCAGC	5 cut(s)	150, 206, 622, 1449, 1519
BstV2I	GAAGAC	2 cut(s)	838, 1780
BstX2I	RGATCY	1 cut(s)	1979
BstXI	CCANNNNNNTGG	2 cut(s)	1582, 1703
BstYI	RGATCY	1 cut(s)	1979
Bsu36I	CCTNAGG	1 cut(s)	1256
BsuI	GTATCC	1 cut(s)	1078
BsuRI	GGCC	7 cut(s)	441, 612, 668, 1020, 1228, 1945, 2007
BtgI	CCRYGG	1 cut(s)	621
BtsCI	GGATG	3 cut(s)	56, 1628, 2045
BtsI	GCAGTG	2 cut(s)	1085, 1297
BtsIMutI	CAGTG	5 cut(s)	308, 1085, 1101, 1297, 1701
Cac8I	GCNNGC	3 cut(s)	274, 861, 970
CciI	TCATGA	1 cut(s)	1897
CfoI	GCGC	1 cut(s)	953
Cfr10I	RCCGGY	1 cut(s)	863
Cfr13I	GGNCC	5 cut(s)	439, 666, 1226, 1235, 2006
CseI	GACGC	1 cut(s)	275
Csp6I	GTAC	6 cut(s)	484, 595, 854, 882, 922, 1741
CspCI	CAANNNNNGTGG	2 cut(s)	250, 285
CviQI	GTAC	6 cut(s)	484, 595, 854, 882, 922, 1741
DdeI	CTNAG	8 cut(s)	687, 926, 954, 1130, 1164, 1256, 1396, 1836
DpnI	GATC	6 cut(s)	918, 1203, 1310, 1404, 1754, 1981
DpnII	GATC	6 cut(s)	916, 1201, 1308, 1402, 1752, 1979
EaeI	YGGCCR	1 cut(s)	610
Eam1104I	CTCTTC	2 cut(s)	530, 553
EarI	CTCTTC	2 cut(s)	530, 553
EciI	GGCGGA	1 cut(s)	1353
Eco105I	TACGTA	1 cut(s)	853
Eco130I	CCWWGG	4 cut(s)	621, 646, 1015, 2009
Eco147I	AGGCCT	2 cut(s)	1020, 1945
Eco31I	GGTCTC	3 cut(s)	97, 378, 1167
Eco47I	GGWCC	1 cut(s)	1235
Eco81I	CCTNAGG	1 cut(s)	1256
Eco88I	CYCGRG	1 cut(s)	540
EcoO109I	RGGNCCY	1 cut(s)	1226
EcoRI	GAATTC	1 cut(s)	1099
EcoRII	CCWGG	4 cut(s)	98, 892, 1020, 1490
EcoT14I	CCWWGG	4 cut(s)	621, 646, 1015, 2009
ErhI	CCWWGG	4 cut(s)	621, 646, 1015, 2009
FalI	AAGNNNNNCTT	2 cut(s)	453, 485
FaqI	GGGAC	2 cut(s)	166, 1888
FauNDI	CATATG	3 cut(s)	509, 1483, 1544
Fnu4HI	GCNGC	5 cut(s)	164, 195, 636, 1463, 1508
FokI	GGATG	3 cut(s)	63, 1615, 2032
Fsp4HI	GCNGC	5 cut(s)	164, 195, 636, 1463, 1508
GlaI	GCGC	1 cut(s)	952
GluI	GCNGC	5 cut(s)	164, 195, 636, 1463, 1508
GsaI	CCCAGC	2 cut(s)	732, 1462
GsuI	CTGGAG	2 cut(s)	121, 301
HaeIII	GGCC	7 cut(s)	441, 612, 668, 1020, 1228, 1945, 2007
HapII	CCGG	4 cut(s)	290, 437, 501, 864
HgaI	GACGC	1 cut(s)	275
HhaI	GCGC	1 cut(s)	953
Hin1I	GRCGYC	1 cut(s)	286
Hin6I	GCGC	1 cut(s)	951
HinP1I	GCGC	1 cut(s)	951
HindIII	AAGCTT	3 cut(s)	84, 265, 467
HinfI	GANTC	7 cut(s)	67, 339, 581, 897, 1568, 1901, 2075
HpaII	CCGG	4 cut(s)	290, 437, 501, 864
HphI	GGTGA	4 cut(s)	778, 1399, 1432, 1718
Hpy166II	GTNNAC	2 cut(s)	1092, 1709
Hpy188III	TCNNGA	4 cut(s)	280, 1273, 1390, 1898
Hpy8I	GTNNAC	2 cut(s)	1092, 1709
HpyAV	CCTTC	7 cut(s)	223, 886, 899, 1217, 1396, 1735, 1817
HpyCH4III	ACNGT	3 cut(s)	939, 1096, 2038
HpyCH4IV	ACGT	3 cut(s)	723, 831, 852
HpyF10VI	GCNNNNNNNGC	1 cut(s)	273
HpyF3I	CTNAG	8 cut(s)	687, 926, 954, 1130, 1164, 1256, 1396, 1836
HpySE526I	ACGT	3 cut(s)	723, 831, 852
Hsp92I	GRCGYC	1 cut(s)	286
HspAI	GCGC	1 cut(s)	951
KpnI	GGTACC	1 cut(s)	925
Kzo9I	GATC	6 cut(s)	916, 1201, 1308, 1402, 1752, 1979
LguI	GCTCTTC	1 cut(s)	553
LmnI	GCTCC	3 cut(s)	310, 331, 702
Lsp1109I	GCAGC	5 cut(s)	150, 206, 622, 1449, 1519
LweI	GCATC	3 cut(s)	681, 1050, 1065
MaeII	ACGT	3 cut(s)	723, 831, 852
MaeIII	GTNAC	5 cut(s)	319, 535, 766, 957, 1486
MalI	GATC	6 cut(s)	918, 1203, 1310, 1404, 1754, 1981
MboI	GATC	6 cut(s)	916, 1201, 1308, 1402, 1752, 1979
MfeI	CAATTG	2 cut(s)	741, 1689
MflI	RGATCY	1 cut(s)	1979
MhlI	GDGCHC	1 cut(s)	8
MlsI	TGGCCA	1 cut(s)	612
MluNI	TGGCCA	1 cut(s)	612
MlyI	GAGTC	4 cut(s)	590, 1562, 1910, 2084
MmeI	TCCRAC	2 cut(s)	28, 1947
Mox20I	TGGCCA	1 cut(s)	612
MscI	TGGCCA	1 cut(s)	612
MseI	TTAA	6 cut(s)	497, 572, 1143, 1449, 1551, 2088
MslI	CAYNNNNRTG	4 cut(s)	864, 1606, 1716, 1896
Msp20I	TGGCCA	1 cut(s)	612
MspA1I	CMGCKG	2 cut(s)	1400, 1462
MspI	CCGG	4 cut(s)	290, 437, 501, 864
MspR9I	CCNGG	5 cut(s)	100, 438, 894, 1022, 1492
MunI	CAATTG	2 cut(s)	741, 1689
Mva1269I	GAATGC	2 cut(s)	774, 1846
MvaI	CCWGG	4 cut(s)	100, 894, 1022, 1492
MvnI	CGCG	1 cut(s)	951
MwoI	GCNNNNNNNGC	1 cut(s)	273
NciI	CCSGG	1 cut(s)	438
NcoI	CCATGG	1 cut(s)	621
NdeI	CATATG	3 cut(s)	509, 1483, 1544
NdeII	GATC	6 cut(s)	916, 1201, 1308, 1402, 1752, 1979
NheI	GCTAGC	1 cut(s)	272
NlaIV	GGNNCC	2 cut(s)	923, 1085
NmuCI	GTSAC	2 cut(s)	766, 1486
NspI	RCATGY	2 cut(s)	395, 1747
NspV	TTCGAA	1 cut(s)	1103
OliI	CACNNNNGTG	1 cut(s)	864
PaeR7I	CTCGAG	1 cut(s)	540
PagI	TCATGA	1 cut(s)	1897
PceI	AGGCCT	2 cut(s)	1020, 1945
PciI	ACATGT	2 cut(s)	391, 1743
PciSI	GCTCTTC	1 cut(s)	553
PcsI	WCGNNNNNNNCGW	2 cut(s)	787, 849
PctI	GAATGC	2 cut(s)	774, 1846
PfeI	GAWTC	3 cut(s)	67, 339, 897
PflMI	CCANNNNNTGG	1 cut(s)	1021
PfoI	TCCNGGA	2 cut(s)	98, 892
PkrI	GCNGC	5 cut(s)	165, 196, 637, 1464, 1509
PleI	GAGTC	4 cut(s)	589, 1562, 1909, 2083
PpsI	GAGTC	4 cut(s)	589, 1562, 1909, 2083
Ppu21I	YACGTR	1 cut(s)	853
PscI	ACATGT	2 cut(s)	391, 1743
PsiI	TTATAA	1 cut(s)	1029
Psp6I	CCWGG	4 cut(s)	98, 892, 1020, 1490
PspFI	CCCAGC	2 cut(s)	728, 1458
PspGI	CCWGG	4 cut(s)	98, 892, 1020, 1490
PspN4I	GGNNCC	2 cut(s)	923, 1085
PspPI	GGNCC	5 cut(s)	439, 666, 1226, 1235, 2006
PspXI	VCTCGAGB	1 cut(s)	540
PstI	CTGCAG	1 cut(s)	1467
PsuI	RGATCY	1 cut(s)	1979
PvuII	CAGCTG	2 cut(s)	1400, 1462
RsaI	GTAC	6 cut(s)	485, 596, 855, 883, 923, 1742
RsaNI	GTAC	6 cut(s)	484, 595, 854, 882, 922, 1741
RseI	CAYNNNNRTG	4 cut(s)	864, 1606, 1716, 1896
SapI	GCTCTTC	1 cut(s)	553
SaqAI	TTAA	6 cut(s)	497, 572, 1143, 1449, 1551, 2088
SatI	GCNGC	5 cut(s)	164, 195, 636, 1463, 1508
Sau3AI	GATC	6 cut(s)	916, 1201, 1308, 1402, 1752, 1979
Sau96I	GGNCC	5 cut(s)	439, 666, 1226, 1235, 2006
SchI	GAGTC	4 cut(s)	590, 1562, 1910, 2084
ScrFI	CCNGG	5 cut(s)	100, 438, 894, 1022, 1492
SduI	GDGCHC	1 cut(s)	8
SfaNI	GCATC	3 cut(s)	681, 1050, 1065
SfcI	CTRYAG	2 cut(s)	1463, 1620
Sfr274I	CTCGAG	1 cut(s)	540
SfuI	TTCGAA	1 cut(s)	1103
SgrAI	CRCCGGYG	1 cut(s)	863
SinI	GGWCC	1 cut(s)	1235
SlaI	CTCGAG	1 cut(s)	540
SmiMI	CAYNNNNRTG	4 cut(s)	864, 1606, 1716, 1896
SmlI	CTYRAG	2 cut(s)	540, 1877
SmoI	CTYRAG	2 cut(s)	540, 1877
SnaBI	TACGTA	1 cut(s)	853
SseBI	AGGCCT	2 cut(s)	1020, 1945
SsiI	CCGC	1 cut(s)	1364
StuI	AGGCCT	2 cut(s)	1020, 1945
StyD4I	CCNGG	5 cut(s)	98, 436, 892, 1020, 1490
StyI	CCWWGG	4 cut(s)	621, 646, 1015, 2009
TaaI	ACNGT	3 cut(s)	939, 1096, 2038
TaiI	ACGT	3 cut(s)	726, 834, 855
TaqI	TCGA	5 cut(s)	248, 541, 551, 584, 1103
TatI	WGTACW	1 cut(s)	881
TfiI	GAWTC	3 cut(s)	67, 339, 897
Tru1I	TTAA	6 cut(s)	497, 572, 1143, 1449, 1551, 2088
Tru9I	TTAA	6 cut(s)	497, 572, 1143, 1449, 1551, 2088
TscAI	CASTG	5 cut(s)	315, 1085, 1101, 1297, 1708
TseFI	GTSAC	2 cut(s)	766, 1486
TseI	GCWGC	5 cut(s)	163, 194, 635, 1462, 1507
Tsp45I	GTSAC	2 cut(s)	766, 1486
TspGWI	ACGGA	2 cut(s)	105, 1950
TspRI	CASTG	5 cut(s)	315, 1085, 1101, 1297, 1708
Van91I	CCANNNNNTGG	1 cut(s)	1021
VpaK11BI	GGWCC	1 cut(s)	1235
XapI	RAATTY	2 cut(s)	1099, 1959
XceI	RCATGY	2 cut(s)	395, 1747
XcmI	CCANNNNNNNNNTGG	1 cut(s)	605
XhoI	CTCGAG	1 cut(s)	540
XmaJI	CCTAGG	1 cut(s)	646

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.