Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0001860

Physical Location & Seq

Genomic Coordinates Reverse (-)

65073469 .. 65078188

Gene Structure 4720 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G037390.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2100 bp

ATGAGCACAAATACAGCAGTAGTATCAGTTATCAGGTTCATATTGCTTCTAGTGTTTGTTGGATGGCTCATCATTTGGATTGTGTTGCCAACCGAAACTTACAGAGATTCCTGGAGACCCTACCTCCAAGGCAAACTCAACTCAACATATTTCGGAGATCAAGTTATATATACTAATTACAGGGACAAATCTGCTGCTTTTCTCGTTCCGATGATGTTCATAGCAGCTTTGAGTTGTGTTTATCTCCATCTAATCCGGAAGAGGAAATCAAACAACTTTGCTAGCTACTGGAGACGTCCGGCGAGTGTGAAATCTCCACTGGGAATTGTGACCGCAATGGAGCTCGGTTTCACAATAATGTTTATTGCACTCTTTGTGTGGTCTCTTACCAATTACATACATGTCGGCTTCGCCCACCTCCATAATATGCATACGAAACCAGTTCCAGGCCTGAAAGAGTGGGAAGCAAAGCTTCGTAGCGTGTCGTACAGACTTGGGTTAACCGGAAACATATGTCTGGCATTTCTCTTCTTCCCTGTAACTCGAGGCTCTTCGATTTTGGCTCTGGTTGGCTTAACATCGGAGTCGAGTATCAAGTACCATGTTTGGCTCGGCCATCTCTCCATGGTTCTATTTGCTGCTCATTCCCTAGGCTACATCATCTTCTGGGCCATCACTAATCAAATGGCTGAGATGCTAGAATGGAGCAAGACTCATGTATCAAACGTAGCTGGGGAGATTGCTATTCTATTTGCAATGGCAATGTGGGTGACTAGCATTCCTCGTGTTAGACGAAAAATGTTTGAATTATTTTTCTATACCCACCAGCTCTACGTTCTCTACATCGTCTTCTACGTACTGCACGCCGGTGCTAATTTCTTCTGTACGATCCTTCCTGGGATCTTCCTCTTCATCATAGATCGGTACCTGAGATTTTTACAGTCTAATCAACGCGCTGAGTTACTCTCCGCACGCATTTTACCTTGTGAGACCATTGAACTGAACTTCTCCAAGATCCAAGGTCTGGATTATAATCCCACTAGCATCTTGTTTATCAATGTGCCTAGTGTATCCAAGATGCAGTGGCACCCGTTTACAGTGAATTCGAACTCTAACATGGAGGCAGACAAGTTAAGTGTTGTGATTAAGAGTCTCGGAAGTTGGTCTCAGAAACTTTACCAGCAACTTTCTTCTAATTCTATGGATCATATTCAAGTTTCTGTTGAAGGGCCTTATGGACCTAATTCAACTCATTTTCTAAGGCACAAAGCTCTGGTGATGATTAGTGGAGGCAGTGGAATTACTCCGATGATCTCCATAATCCGAGAAATCATTTTCCAAAGCACCAAACCGGACTGCCATGTTCCGCCTGTTCGGTTGATATGTGCCTTCAAGAACTCAGCTGATCTCACCATGCTACAACTCTTGCTTCCAATTTCTGTCACACCTTCAAATTTTACCCAGCTGCAGTTTCAAATTGAAGCTTATGTGACCAGGGAGACACAGAAGCTGCCTCCATCAGACTCCCTCAAGCTTCTCCAAACCCTATGGTTTAAGCCAGACCCACTGGACTCACCCATTTCTTTGGTTCTAGGACAAAACACTTGGCTATGGCTTGGTGCTATAATCTCATCCTCATTTGTCTTATTTCTCTTTGTTTTGGGCATTGTCAATCGTTTCTATATATACCCAATCGACCACAACACTGGTGAACACTACCATGTCTCCTTCATTTGCCTGTGGTACATGTTTTTGATCTGTGCCTCCATTTTCATAGTCTCTAGTGCAGTCTACATTTGGTGCAAGAGACAGAACGCCATCGAAGATGCGAAGCAAACTCAGAATGCGAAATTATCAACACCAACAACTGATATCGAACTTGCGAGTTCTCCCCATAATCATGAGTCCCTGATTGCTCAAGCTACCCAAGTGCATTATGGAACTAGGCCTAACCTGAAGAAAATTCTGTTGGAGACCAAAGGATCTGATATTGGAGTGTTGGTTTGTGGCCCAAGGAAGATGAGGCATGAGGTTGCCACAGTCTGTTCATCCAGCTTGGCACATAATCTGCACTTTGAGTCCATTAGCTTTAACTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000293 GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0016491 GO:0016722 GO:0016723 GO:0055114

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NAD_binding_6

Protein Analysis

699

Amino Acids

79.52

Weight (kDa)

9.23

Isoelectric Point (pI)

37.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ferric_reduct	PF01794	165 - 285	1.1e-19	Ferric reductase like transmembrane component
FAD_binding_8	PF08022	320 - 415	1.8e-23	FAD-binding domain
NAD_binding_6	PF08030	423 - 682	1.1e-21	Ferric reductase NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001860)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G23980 AT5G23990 AT5G23990 AT5G23990
fragaria_vesca	FvH4_7g30120 FvH4_7g30120 FvH4_7g30141
malus_domestica	MD01G1207200.v1.1 MD07G1278100.v1.1
prunus_persica	Prupe.2G299900_v2.0.a1
pyrus_communis	pycom07g25310
rosa_chinensis	RchiOBHm_Chr1g0378121 RchiOBHm_Chr1g0378131 RchiOBHm_Chr1g0378151 RchiOBHm_Chr1g0378171
rosa_laevigata	RLG00000026465 RLG00000026467 RLG00000026469 RLG00000026470
rosa_multiflora	Rmu_sc0000625.1_g000007 Rmu_sc0000625.1_g000009 Rmu_sc0001465.1_g000007 Rmu_sc0001465.1_g000010
rosa_roxburghii	Rroxscaffold_156G00440270 Rroxscaffold_4G00280700 Rroxscaffold_4G00280710 Rroxscaffold_4G00280730 Rroxscaffold_4G00280760
rosa_rugosa	Rorug01G0406500 Rorug01G0406700
rosa_samantha	Rh1AG423000 Rh1AG423100 Rh1AG423300 Rh1BG385300 Rh1BG385500 Rh1BG385800 Rh1CG399300 Rh1CG399500 Rh1CG399600 Rh1DG416500 Rh1DG416700 Rh1DG416900
rosa_wichuraiana	Rw1G037390 Rw1G037400 Rw1G037420 Rw1G037430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1032
AatII	GACGTC	1 cut(s)	298
Acc65I	GGTACC	1 cut(s)	924
AccB1I	GGYRCC	2 cut(s)	924, 1086
AccB7I	CCANNNNNTGG	1 cut(s)	1024
AccI	GTMKAC	1 cut(s)	1791
AccII	CGCG	1 cut(s)	954
AccIII	TCCGGA	1 cut(s)	255
AciI	CCGC	3 cut(s)	333, 969, 1367
AclWI	GGATC	5 cut(s)	883, 908, 1009, 1212, 1990
AcoI	YGGCCR	1 cut(s)	613
AcsI	RAATTY	3 cut(s)	1102, 1453, 1962
AcuI	CTGAAG	1 cut(s)	1976
AcyI	GRCGYC	1 cut(s)	295
AfaI	GTAC	6 cut(s)	488, 599, 858, 886, 926, 1745
AfiI	CCNNNNNNNGG	2 cut(s)	446, 1024
AflIII	ACRYGT	2 cut(s)	400, 1746
AgsI	TTSAA	9 cut(s)	806, 998, 1214, 1226, 1248, 1393, 1452, 1475, 1481
AjnI	CCWGG	4 cut(s)	110, 445, 895, 1493
AjuI	GAANNNNNNNTTGG	2 cut(s)	1952, 1984
AleI	CACNNNNGTG	1 cut(s)	867
Alw21I	GWGCWC	2 cut(s)	8, 345
AlwI	GGATC	5 cut(s)	883, 908, 1009, 1212, 1990
AlwNI	CAGNNNCTG	1 cut(s)	1510
Ama87I	CYCGRG	1 cut(s)	543
Aor13HI	TCCGGA	1 cut(s)	255
AoxI	GGCC	6 cut(s)	448, 613, 669, 1229, 1946, 2008
ApeKI	GCWGC	5 cut(s)	194, 224, 638, 1465, 1510
ApoI	RAATTY	3 cut(s)	1102, 1453, 1962
Asp718I	GGTACC	1 cut(s)	924
AspA2I	CCTAGG	1 cut(s)	649
AspLEI	GCGC	1 cut(s)	956
AspS9I	GGNCC	4 cut(s)	669, 1229, 1238, 2009
AsuHPI	GGTGA	5 cut(s)	781, 1288, 1402, 1566, 1721
AsuII	TTCGAA	1 cut(s)	1106
AsuNHI	GCTAGC	1 cut(s)	281
AvaI	CYCGRG	1 cut(s)	543
AvaII	GGWCC	1 cut(s)	1238
AvrII	CCTAGG	1 cut(s)	649
BaeI	ACNNNNGTAYC	2 cut(s)	702, 735
BanI	GGYRCC	2 cut(s)	924, 1086
BanII	GRGCYC	1 cut(s)	345
BauI	CACGAG	1 cut(s)	783
BbsI	GAAGAC	1 cut(s)	841
Bbv12I	GWGCWC	2 cut(s)	8, 345
BbvI	GCAGC	5 cut(s)	181, 236, 625, 1452, 1497
BccI	CCATC	6 cut(s)	57, 255, 624, 680, 1525, 1826
BciT130I	CCWGG	4 cut(s)	112, 447, 897, 1495
BciVI	GTATCC	1 cut(s)	1081
BfmI	CTRYAG	1 cut(s)	1466
BfuI	GTATCC	1 cut(s)	1081
BisI	GCNGC	5 cut(s)	195, 225, 639, 1466, 1511
BlnI	CCTAGG	1 cut(s)	649
BlsI	GCNGC	5 cut(s)	196, 226, 640, 1467, 1512
Bme1390I	CCNGG	4 cut(s)	112, 447, 897, 1495
Bme18I	GGWCC	1 cut(s)	1238
BmeT110I	CYCGRG	1 cut(s)	543
BmgT120I	GGNCC	4 cut(s)	669, 1229, 1238, 2009
BmiI	GGNNCC	2 cut(s)	926, 1088
BmrFI	CCNGG	4 cut(s)	112, 447, 897, 1495
BmrI	ACTGGG	1 cut(s)	329
BmsI	GCATC	4 cut(s)	684, 1053, 1068, 1816
BmtI	GCTAGC	1 cut(s)	285
BmuI	ACTGGG	1 cut(s)	329
BpiI	GAAGAC	1 cut(s)	841
BplI	GAGNNNNNCTC	4 cut(s)	697, 729, 950, 982
BpmI	CTGGAG	2 cut(s)	133, 310
Bpu14I	TTCGAA	1 cut(s)	1106
BpuEI	CTTGAG	2 cut(s)	1514, 1902
BsaAI	YACGTR	1 cut(s)	856
BsaBI	GATNNNNATC	1 cut(s)	1032
BsaHI	GRCGYC	1 cut(s)	295
BsaI	GGTCTC	5 cut(s)	109, 387, 983, 1170, 1967
BsaJI	CCNNGG	7 cut(s)	127, 624, 649, 896, 1018, 1494, 2012
BsaWI	WCCGGW	3 cut(s)	255, 503, 1351
BsaXI	ACNNNNNCTCC	8 cut(s)	108, 138, 147, 177, 1709, 1739, 1986, 2016
Bsc4I	CCNNNNNNNGG	2 cut(s)	446, 1024
Bse118I	RCCGGY	1 cut(s)	866
Bse1I	ACTGG	6 cut(s)	293, 324, 440, 1572, 1711, 2099
Bse3DI	GCAATG	3 cut(s)	342, 762, 768
Bse8I	GATNNNNATC	1 cut(s)	1032
BseAI	TCCGGA	1 cut(s)	255
BseBI	CCWGG	4 cut(s)	112, 447, 897, 1495
BseDI	CCNNGG	7 cut(s)	127, 624, 649, 896, 1018, 1494, 2012
BseGI	GGATG	3 cut(s)	68, 1631, 2048
BseJI	GATNNNNATC	1 cut(s)	1032
BseLI	CCNNNNNNNGG	2 cut(s)	446, 1024
BseMI	GCAATG	3 cut(s)	342, 762, 768
BseMII	CTCAG	6 cut(s)	681, 920, 948, 1181, 1413, 1853
BseNI	ACTGG	6 cut(s)	293, 324, 440, 1572, 1711, 2099
BseXI	GCAGC	5 cut(s)	181, 236, 625, 1452, 1497
BseYI	CCCAGC	2 cut(s)	731, 1461
BsgI	GTGCAG	3 cut(s)	845, 1806, 2054
Bsh1236I	CGCG	1 cut(s)	954
BshFI	GGCC	6 cut(s)	450, 615, 671, 1231, 1948, 2010
BshNI	GGYRCC	2 cut(s)	924, 1086
BsiHKAI	GWGCWC	2 cut(s)	8, 345
BsiHKCI	CYCGRG	1 cut(s)	543
BsiSI	CCGG	5 cut(s)	256, 299, 504, 867, 1352
BslFI	GGGAC	2 cut(s)	197, 1891
BslI	CCNNNNNNNGG	2 cut(s)	446, 1024
BsmBI	CGTCTC	1 cut(s)	286
BsmFI	GGGAC	2 cut(s)	197, 1891
BsmI	GAATGC	2 cut(s)	777, 1849
BsnI	GGCC	6 cut(s)	450, 615, 671, 1231, 1948, 2010
Bso31I	GGTCTC	5 cut(s)	109, 387, 983, 1170, 1967
BsoBI	CYCGRG	1 cut(s)	543
Bsp119I	TTCGAA	1 cut(s)	1106
Bsp1286I	GDGCHC	2 cut(s)	8, 345
Bsp13I	TCCGGA	1 cut(s)	255
Bsp19I	CCATGG	1 cut(s)	624
BspACI	CCGC	3 cut(s)	333, 969, 1367
BspANI	GGCC	6 cut(s)	450, 615, 671, 1231, 1948, 2010
BspCNI	CTCAG	6 cut(s)	682, 921, 949, 1180, 1412, 1852
BspEI	TCCGGA	1 cut(s)	255
BspFNI	CGCG	1 cut(s)	954
BspHI	TCATGA	1 cut(s)	1900
BspLI	GGNNCC	2 cut(s)	926, 1088
BspMAI	CTGCAG	1 cut(s)	1470
BspOI	GCTAGC	1 cut(s)	285
BspPI	GGATC	5 cut(s)	883, 908, 1009, 1212, 1990
BspQI	GCTCTTC	1 cut(s)	556
BspT104I	TTCGAA	1 cut(s)	1106
BspT107I	GGYRCC	2 cut(s)	924, 1086
BspTNI	GGTCTC	5 cut(s)	109, 387, 983, 1170, 1967
BsrDI	GCAATG	3 cut(s)	342, 762, 768
BsrFI	RCCGGY	1 cut(s)	866
BsrI	ACTGG	6 cut(s)	293, 324, 440, 1572, 1711, 2099
BssAI	RCCGGY	1 cut(s)	866
BssECI	CCNNGG	7 cut(s)	127, 624, 649, 896, 1018, 1494, 2012
BssNI	GRCGYC	1 cut(s)	295
BssSI	CACGAG	1 cut(s)	783
BssT1I	CCWWGG	5 cut(s)	127, 624, 649, 1018, 2012
Bst2BI	CACGAG	1 cut(s)	783
Bst2UI	CCWGG	4 cut(s)	112, 447, 897, 1495
Bst4CI	ACNGT	3 cut(s)	942, 1099, 2041
Bst6I	CTCTTC	4 cut(s)	254, 533, 556, 914
BstACI	GRCGYC	1 cut(s)	295
BstBAI	YACGTR	1 cut(s)	856
BstBI	TTCGAA	1 cut(s)	1106
BstC8I	GCNNGC	3 cut(s)	283, 864, 973
BstDEI	CTNAG	7 cut(s)	690, 929, 957, 1167, 1259, 1399, 1839
BstDSI	CCRYGG	1 cut(s)	624
BstF5I	GGATG	3 cut(s)	68, 1631, 2048
BstFNI	CGCG	1 cut(s)	954
BstHHI	GCGC	1 cut(s)	956
BstNI	CCWGG	4 cut(s)	112, 447, 897, 1495
BstNSI	RCATGY	2 cut(s)	404, 1750
BstSCI	CCNGG	4 cut(s)	110, 445, 895, 1493
BstSFI	CTRYAG	1 cut(s)	1466
BstSNI	TACGTA	1 cut(s)	856
BstUI	CGCG	1 cut(s)	954
BstV1I	GCAGC	5 cut(s)	181, 236, 625, 1452, 1497
BstV2I	GAAGAC	1 cut(s)	841
BstX2I	RGATCY	3 cut(s)	900, 1014, 1982
BstXI	CCANNNNNNTGG	2 cut(s)	1585, 1706
BstYI	RGATCY	3 cut(s)	900, 1014, 1982
BsuI	GTATCC	1 cut(s)	1081
BsuRI	GGCC	6 cut(s)	450, 615, 671, 1231, 1948, 2010
BtgI	CCRYGG	1 cut(s)	624
BtsCI	GGATG	3 cut(s)	68, 1631, 2048
BtsI	GCAGTG	2 cut(s)	1088, 1300
BtsIMutI	CAGTG	6 cut(s)	317, 1088, 1104, 1300, 1565, 1704
Cac8I	GCNNGC	3 cut(s)	283, 864, 973
CaiI	CAGNNNCTG	1 cut(s)	1510
CciI	TCATGA	1 cut(s)	1900
CfoI	GCGC	1 cut(s)	956
Cfr10I	RCCGGY	1 cut(s)	866
Cfr13I	GGNCC	4 cut(s)	669, 1229, 1238, 2009
Csp6I	GTAC	6 cut(s)	487, 598, 857, 885, 925, 1744
CviQI	GTAC	6 cut(s)	487, 598, 857, 885, 925, 1744
DdeI	CTNAG	7 cut(s)	690, 929, 957, 1167, 1259, 1399, 1839
EaeI	YGGCCR	1 cut(s)	613
Eam1104I	CTCTTC	4 cut(s)	254, 533, 556, 914
EarI	CTCTTC	4 cut(s)	254, 533, 556, 914
EciI	GGCGGA	1 cut(s)	1356
Ecl136II	GAGCTC	1 cut(s)	343
Eco105I	TACGTA	1 cut(s)	856
Eco130I	CCWWGG	5 cut(s)	127, 624, 649, 1018, 2012
Eco147I	AGGCCT	2 cut(s)	450, 1948
Eco24I	GRGCYC	1 cut(s)	345
Eco31I	GGTCTC	5 cut(s)	109, 387, 983, 1170, 1967
Eco32I	GATATC	1 cut(s)	1873
Eco47I	GGWCC	1 cut(s)	1238
Eco53kI	GAGCTC	1 cut(s)	343
Eco57I	CTGAAG	1 cut(s)	1976
Eco88I	CYCGRG	1 cut(s)	543
EcoICRI	GAGCTC	1 cut(s)	343
EcoO109I	RGGNCCY	1 cut(s)	1229
EcoRI	GAATTC	1 cut(s)	1102
EcoRII	CCWGG	4 cut(s)	110, 445, 895, 1493
EcoRV	GATATC	1 cut(s)	1873
EcoT14I	CCWWGG	5 cut(s)	127, 624, 649, 1018, 2012
EcoT22I	ATGCAT	1 cut(s)	432
EcoT38I	GRGCYC	1 cut(s)	345
ErhI	CCWWGG	5 cut(s)	127, 624, 649, 1018, 2012
Esp3I	CGTCTC	1 cut(s)	286
FalI	AAGNNNNNCTT	2 cut(s)	456, 488
FaqI	GGGAC	2 cut(s)	197, 1891
FauNDI	CATATG	1 cut(s)	512
FblI	GTMKAC	1 cut(s)	1791
Fnu4HI	GCNGC	5 cut(s)	195, 225, 639, 1466, 1511
FokI	GGATG	3 cut(s)	75, 1618, 2035
FriOI	GRGCYC	1 cut(s)	345
Fsp4HI	GCNGC	5 cut(s)	195, 225, 639, 1466, 1511
GlaI	GCGC	1 cut(s)	955
GluI	GCNGC	5 cut(s)	195, 225, 639, 1466, 1511
GsaI	CCCAGC	2 cut(s)	735, 1465
GsuI	CTGGAG	2 cut(s)	133, 310
HaeIII	GGCC	6 cut(s)	450, 615, 671, 1231, 1948, 2010
HapII	CCGG	5 cut(s)	256, 299, 504, 867, 1352
HhaI	GCGC	1 cut(s)	956
Hin1I	GRCGYC	1 cut(s)	295
Hin6I	GCGC	1 cut(s)	954
HinP1I	GCGC	1 cut(s)	954
HincII	GTYRAC	1 cut(s)	501
HindII	GTYRAC	1 cut(s)	501
HindIII	AAGCTT	3 cut(s)	470, 1482, 1532
HinfI	GANTC	8 cut(s)	107, 584, 712, 1150, 1523, 1571, 1904, 2078
HpaI	GTTAAC	1 cut(s)	501
HpaII	CCGG	5 cut(s)	256, 299, 504, 867, 1352
HphI	GGTGA	5 cut(s)	781, 1288, 1402, 1566, 1721
Hpy166II	GTNNAC	4 cut(s)	501, 1095, 1712, 1792
Hpy188III	TCNNGA	4 cut(s)	256, 1025, 1393, 1901
Hpy8I	GTNNAC	4 cut(s)	501, 1095, 1712, 1792
HpyAV	CCTTC	5 cut(s)	902, 1220, 1399, 1458, 1738
HpyCH4III	ACNGT	3 cut(s)	942, 1099, 2041
HpyCH4IV	ACGT	4 cut(s)	295, 726, 834, 855
HpyF3I	CTNAG	7 cut(s)	690, 929, 957, 1167, 1259, 1399, 1839
HpySE526I	ACGT	4 cut(s)	295, 726, 834, 855
Hsp92I	GRCGYC	1 cut(s)	295
HspAI	GCGC	1 cut(s)	954
Kpn2I	TCCGGA	1 cut(s)	255
KpnI	GGTACC	1 cut(s)	928
KspAI	GTTAAC	1 cut(s)	501
LguI	GCTCTTC	1 cut(s)	556
LmnI	GCTCC	2 cut(s)	340, 705
Lsp1109I	GCAGC	5 cut(s)	181, 236, 625, 1452, 1497
LweI	GCATC	4 cut(s)	684, 1053, 1068, 1816
MaeII	ACGT	4 cut(s)	295, 726, 834, 855
MaeIII	GTNAC	6 cut(s)	328, 538, 769, 960, 1441, 1489
MflI	RGATCY	3 cut(s)	900, 1014, 1982
MhlI	GDGCHC	2 cut(s)	8, 345
MlyI	GAGTC	7 cut(s)	593, 706, 1159, 1517, 1565, 1913, 2087
MmeI	TCCRAC	2 cut(s)	40, 1950
Mph1103I	ATGCAT	1 cut(s)	432
MroI	TCCGGA	1 cut(s)	255
MseI	TTAA	6 cut(s)	500, 575, 1133, 1146, 1554, 2091
MslI	CAYNNNNRTG	4 cut(s)	356, 867, 1719, 1899
MspA1I	CMGCKG	2 cut(s)	1403, 1465
MspI	CCGG	5 cut(s)	256, 299, 504, 867, 1352
MspR9I	CCNGG	4 cut(s)	112, 447, 897, 1495
Mva1269I	GAATGC	2 cut(s)	777, 1849
MvaI	CCWGG	4 cut(s)	112, 447, 897, 1495
MvnI	CGCG	1 cut(s)	954
NcoI	CCATGG	1 cut(s)	624
NdeI	CATATG	1 cut(s)	512
NheI	GCTAGC	1 cut(s)	281
NlaIV	GGNNCC	2 cut(s)	926, 1088
NmeAIII	GCCGAG	1 cut(s)	591
NmuCI	GTSAC	4 cut(s)	328, 769, 1441, 1489
NsiI	ATGCAT	1 cut(s)	432
NspI	RCATGY	2 cut(s)	404, 1750
NspV	TTCGAA	1 cut(s)	1106
OliI	CACNNNNGTG	1 cut(s)	867
PaeR7I	CTCGAG	1 cut(s)	543
PagI	TCATGA	1 cut(s)	1900
PceI	AGGCCT	2 cut(s)	450, 1948
PciI	ACATGT	2 cut(s)	400, 1746
PciSI	GCTCTTC	1 cut(s)	556
PcsI	WCGNNNNNNNCGW	2 cut(s)	790, 852
PctI	GAATGC	2 cut(s)	777, 1849
PfeI	GAWTC	1 cut(s)	107
PflMI	CCANNNNNTGG	1 cut(s)	1024
PfoI	TCCNGGA	1 cut(s)	110
PkrI	GCNGC	5 cut(s)	196, 226, 640, 1467, 1512
PleI	GAGTC	7 cut(s)	592, 706, 1158, 1517, 1565, 1912, 2086
PpsI	GAGTC	7 cut(s)	592, 706, 1158, 1517, 1565, 1912, 2086
Ppu21I	YACGTR	1 cut(s)	856
PscI	ACATGT	2 cut(s)	400, 1746
PsiI	TTATAA	1 cut(s)	1032
Psp124BI	GAGCTC	1 cut(s)	345
Psp6I	CCWGG	4 cut(s)	110, 445, 895, 1493
PspFI	CCCAGC	2 cut(s)	731, 1461
PspGI	CCWGG	4 cut(s)	110, 445, 895, 1493
PspN4I	GGNNCC	2 cut(s)	926, 1088
PspPI	GGNCC	4 cut(s)	669, 1229, 1238, 2009
PspXI	VCTCGAGB	1 cut(s)	543
PstI	CTGCAG	1 cut(s)	1470
PstNI	CAGNNNCTG	1 cut(s)	1510
PsuI	RGATCY	3 cut(s)	900, 1014, 1982
PvuII	CAGCTG	2 cut(s)	1403, 1465
RsaI	GTAC	6 cut(s)	488, 599, 858, 886, 926, 1745
RsaNI	GTAC	6 cut(s)	487, 598, 857, 885, 925, 1744
RseI	CAYNNNNRTG	4 cut(s)	356, 867, 1719, 1899
SacI	GAGCTC	1 cut(s)	345
SapI	GCTCTTC	1 cut(s)	556
SaqAI	TTAA	6 cut(s)	500, 575, 1133, 1146, 1554, 2091
SatI	GCNGC	5 cut(s)	195, 225, 639, 1466, 1511
Sau96I	GGNCC	4 cut(s)	669, 1229, 1238, 2009
SchI	GAGTC	7 cut(s)	593, 706, 1159, 1517, 1565, 1913, 2087
ScrFI	CCNGG	4 cut(s)	112, 447, 897, 1495
SduI	GDGCHC	2 cut(s)	8, 345
SfaNI	GCATC	4 cut(s)	684, 1053, 1068, 1816
SfcI	CTRYAG	1 cut(s)	1466
Sfr274I	CTCGAG	1 cut(s)	543
SfuI	TTCGAA	1 cut(s)	1106
SgrAI	CRCCGGYG	1 cut(s)	866
SinI	GGWCC	1 cut(s)	1238
SlaI	CTCGAG	1 cut(s)	543
SmiMI	CAYNNNNRTG	4 cut(s)	356, 867, 1719, 1899
SmlI	CTYRAG	3 cut(s)	543, 1529, 1917
SmoI	CTYRAG	3 cut(s)	543, 1529, 1917
SnaBI	TACGTA	1 cut(s)	856
SseBI	AGGCCT	2 cut(s)	450, 1948
SsiI	CCGC	3 cut(s)	333, 969, 1367
SstI	GAGCTC	1 cut(s)	345
StuI	AGGCCT	2 cut(s)	450, 1948
StyD4I	CCNGG	4 cut(s)	110, 445, 895, 1493
StyI	CCWWGG	5 cut(s)	127, 624, 649, 1018, 2012
TaaI	ACNGT	3 cut(s)	942, 1099, 2041
TaiI	ACGT	4 cut(s)	298, 729, 837, 858
TaqI	TCGA	7 cut(s)	544, 554, 587, 1106, 1695, 1821, 1875
TfiI	GAWTC	1 cut(s)	107
Tru1I	TTAA	6 cut(s)	500, 575, 1133, 1146, 1554, 2091
Tru9I	TTAA	6 cut(s)	500, 575, 1133, 1146, 1554, 2091
TscAI	CASTG	6 cut(s)	324, 1088, 1104, 1300, 1572, 1711
TseFI	GTSAC	4 cut(s)	328, 769, 1441, 1489
TseI	GCWGC	5 cut(s)	194, 224, 638, 1465, 1510
Tsp45I	GTSAC	4 cut(s)	328, 769, 1441, 1489
TspDTI	ATGAA	6 cut(s)	28, 208, 901, 1720, 1762, 2037
TspRI	CASTG	6 cut(s)	324, 1088, 1104, 1300, 1572, 1711
Van91I	CCANNNNNTGG	1 cut(s)	1024
VpaK11BI	GGWCC	1 cut(s)	1238
XapI	RAATTY	3 cut(s)	1102, 1453, 1962
XceI	RCATGY	2 cut(s)	404, 1750
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1934
XhoI	CTCGAG	1 cut(s)	543
XmaJI	CCTAGG	1 cut(s)	649
XmiI	GTMKAC	1 cut(s)	1791
ZraI	GACGTC	1 cut(s)	296
Zsp2I	ATGCAT	1 cut(s)	432

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.