Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0001860

Physical Location & Seq

Genomic Coordinates Reverse (-)

65081796 .. 65095724

Gene Structure 13929 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G037400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2124 bp

ATGAGCACTAATACAGCAGTAGCATCAGTTATGAGGTTCATATTACTTCTAGTGTTTGTTGGATGGCTCATCATTTGGATTGTGTTGCCAACCAAAACTTACGGTGATTCCTGGAGACCCTACCTTCAAGCCAAACTCAACTCAACATATTTCGGATATCGAGACAGATTTTTATATATACTAATTGCAGGGACAAATCTGCTGCTTTTCTCGTTCCCGATGATGTTCATAGCAGCTTTGAGTTGTGTTTATCTCCATCTAATTCAGAAGGAGAAATCATCATACTCGACATACTACTCCACAAGCTTTGCTAGCTTCTGGAGGCACCCCCTCTCGCCCCTACCTGGGTCCGCCAGTGTCTGGAGGCGTCCGGCGAGTGTGAAAGCTCCTCTGGGAATTGTGACTACGATGGAGCTTGGTTTCGCTGTAATGTTTGTTGCACTCTTGGTGTGGTCTCTTACCAATTACATACATGTCGGGTTTGCCTACCTCCATAATATGTATAAGAAACCTGTTCCCGGCCTGAAAGAGAGAGAGTGGGAAGCGAAGCTTCATTATGTATCGTACTGGCTTGGGTTAACCGGAAACATATATGTGGCATTTCTCTTCTTCCCTATAACTCGAGGCTCTTCGATTTTGGCTCTGGTTGGCTTAACGTCGGAGTCGAGTATCAAGTACCATATTTGGCTCGGCCATCTCTCCATGGTTCTATTTGCTGCTCATTCCCTGGGCTACATTATCTTCTGGGCCATCACTCATCAAATGGCTCAGGTACAATCAACTAAATCAATGGTGATGATGCATATGCTAGAATGGAGCTCAACTCGGGTATCAAGCGTAGCAGGGGAGATTGCAATAGTGTTTGCAATTGCAATCTCTACGTTCTCTACATCGTCTTCTACGTACTGCACACCGGTGCTTAATTATTTCTTCTGTACGATCCTTCCTGGGATCTTCCTCTTCATCATAGATCGGTACCTGAGATTTTTACAATCTTATCAACGTGCCGAGTTAGTCTCCGCACGCATTTCACCTTGTGAGACCATTGAACTCAACTTCTCCAAGAGCCGAGGCCTAGATTATAATCCCACTAGCATCTTGTTTATCAATGTCCCTAGTGTATCCAAGATGCAATGGCACCCATTTACAGTGACTTCAAACTCTAACATGGAGGCAGATAAGCTAAGTGTTAAACTTTACCAGCAACTTTCTTCTAATTCTGTGGATCATATTCAAGTTTCTGTTGAAGGGCCTTATGGACCTCGTTCATCTCATTTTCTAAGGCACAAGGCTCTGGTGGTGATTAGTGGAGGCAGTGGAATTACACCGATGATCTCCATAATCCGAGAAATCATTTTCCAAAGCACCAAACCAGACTGCCATGTTCCGCCTGTTCGGTTGATATGTGCCTTCAAGAACTCAGCTGATCTCACCATGCTACAACTCTTGCTTCCAATTTCTGTCACACCTTCTAATTTTACCCAGCTGCAGTTTCAAATTGAAGCATATGTGACCAGGGAGACACACAAGCAGCCTCCACCAGAACCCCACAAGTCTCTCCAAACCTTATGGTTTAAGCCAAACCAACTGAACTCACCCATTTCTTTGGTTCTAGGACAAAACACTTGGCTATGGCTTGGTGCTATAATCTCATCCTCATTTGTCTTATTTCTCTTTGTTTTGGGCATTGTCAATCGTTTCTATATATACCCAATCGACCACAACACTGGTGAACACTACCATGTCTCCTTCATTTGCCTGTGGTACAAGTTTTTGGTCTCATGTGCCTCCATTTTCATAGTCTCTAGTGCAGTCTTCATTTGGTGCAAGAGACAGAACGCCATCGAAGAAGGGAAGCGAACTCAGAATGCGAGATCAACACCAACAACTGATATCGAACTTGCGAGTTCTCCCCATAATCATGAGTCCCTGATCGCTCAAGCTACCCAAGTGCATTATGGAACTAGGCCTGACCTGAAGAAAATTCTGTTATTGGAAACCAAAGGATCTGATATTGGAGTGTTGGTTAGTGGCCCAAGGAAGTTGAGACATGAGGTTGCCACAGTCTGTTCATCCAGTTTGGCACATAATCTGCACTTTGAGTCCATTAGCTTTAACTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000293 GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0016491 GO:0016722 GO:0016723 GO:0055114

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NAD_binding_6

Protein Analysis

707

Amino Acids

80.03

Weight (kDa)

9.33

Isoelectric Point (pI)

42.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ferric_reduct	PF01794	191 - 299	3.5e-08	Ferric reductase like transmembrane component
FAD_binding_8	PF08022	336 - 422	1.1e-14	FAD-binding domain
NAD_binding_6	PF08030	430 - 690	4.5e-17	Ferric reductase NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001860)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G23980 AT5G23990 AT5G23990 AT5G23990
fragaria_vesca	FvH4_7g30120 FvH4_7g30120 FvH4_7g30141
malus_domestica	MD01G1207200.v1.1 MD07G1278100.v1.1
prunus_persica	Prupe.2G299900_v2.0.a1
pyrus_communis	pycom07g25310
rosa_chinensis	RchiOBHm_Chr1g0378121 RchiOBHm_Chr1g0378131 RchiOBHm_Chr1g0378151 RchiOBHm_Chr1g0378171
rosa_laevigata	RLG00000026465 RLG00000026467 RLG00000026469 RLG00000026470
rosa_multiflora	Rmu_sc0000625.1_g000007 Rmu_sc0000625.1_g000009 Rmu_sc0001465.1_g000007 Rmu_sc0001465.1_g000010
rosa_roxburghii	Rroxscaffold_156G00440270 Rroxscaffold_4G00280700 Rroxscaffold_4G00280710 Rroxscaffold_4G00280730 Rroxscaffold_4G00280760
rosa_rugosa	Rorug01G0406500 Rorug01G0406700
rosa_samantha	Rh1AG423000 Rh1AG423100 Rh1AG423300 Rh1BG385300 Rh1BG385500 Rh1BG385800 Rh1CG399300 Rh1CG399500 Rh1CG399600 Rh1DG416500 Rh1DG416700 Rh1DG416900
rosa_wichuraiana	Rw1G037390 Rw1G037400 Rw1G037420 Rw1G037430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1083
Acc65I	GGTACC	1 cut(s)	975
AccB1I	GGYRCC	3 cut(s)	324, 975, 1137
AccB7I	CCANNNNNTGG	1 cut(s)	360
AciI	CCGC	3 cut(s)	351, 1020, 1388
AclWI	GGATC	4 cut(s)	934, 959, 1233, 2014
AcoI	YGGCCR	1 cut(s)	691
AcsI	RAATTY	1 cut(s)	1983
AcuI	CTGAAG	1 cut(s)	1997
AcyI	GRCGYC	1 cut(s)	367
AdeI	CACNNNGTG	1 cut(s)	1037
AfaI	GTAC	7 cut(s)	566, 677, 774, 905, 937, 977, 1766
AfiI	CCNNNNNNNGG	4 cut(s)	344, 345, 360, 518
AflIII	ACRYGT	1 cut(s)	472
AgeI	ACCGGT	1 cut(s)	913
AgsI	TTSAA	8 cut(s)	128, 1049, 1158, 1235, 1247, 1414, 1496, 1502
AjnI	CCWGG	5 cut(s)	110, 343, 726, 946, 1514
AleI	CACNNNNGTG	1 cut(s)	914
Alw21I	GWGCWC	2 cut(s)	8, 821
AlwI	GGATC	4 cut(s)	934, 959, 1233, 2014
AlwNI	CAGNNNCTG	1 cut(s)	360
Ama87I	CYCGRG	2 cut(s)	621, 825
AoxI	GGCC	7 cut(s)	520, 691, 747, 1072, 1250, 1967, 2032
ApeKI	GCWGC	5 cut(s)	202, 233, 716, 1486, 1531
ApoI	RAATTY	1 cut(s)	1983
AsiGI	ACCGGT	1 cut(s)	913
Asp718I	GGTACC	1 cut(s)	975
AspS9I	GGNCC	5 cut(s)	348, 747, 1250, 1259, 2033
AsuC2I	CCSGG	1 cut(s)	519
AsuHPI	GGTGA	7 cut(s)	116, 805, 1023, 1312, 1423, 1587, 1742
AsuNHI	GCTAGC	1 cut(s)	311
AvaI	CYCGRG	2 cut(s)	621, 825
AvaII	GGWCC	2 cut(s)	348, 1259
BaeI	ACNNNNGTAYC	2 cut(s)	813, 846
BanI	GGYRCC	3 cut(s)	324, 975, 1137
BanII	GRGCYC	1 cut(s)	821
BbsI	GAAGAC	2 cut(s)	888, 1807
Bbv12I	GWGCWC	2 cut(s)	8, 821
BbvI	GCAGC	5 cut(s)	189, 245, 703, 1473, 1543
BccI	CCATC	6 cut(s)	57, 264, 403, 702, 758, 1850
BciT130I	CCWGG	5 cut(s)	112, 345, 728, 948, 1516
BciVI	GTATCC	1 cut(s)	1132
BcnI	CCSGG	1 cut(s)	519
BfaI	CTAG	9 cut(s)	50, 312, 809, 1076, 1092, 1116, 1613, 1806, 1965
BfmI	CTRYAG	1 cut(s)	1487
BfuI	GTATCC	1 cut(s)	1132
BisI	GCNGC	5 cut(s)	203, 234, 717, 1487, 1532
BlsI	GCNGC	5 cut(s)	204, 235, 718, 1488, 1533
Bme1390I	CCNGG	6 cut(s)	112, 345, 519, 728, 948, 1516
Bme18I	GGWCC	2 cut(s)	348, 1259
BmeT110I	CYCGRG	2 cut(s)	621, 825
BmgT120I	GGNCC	5 cut(s)	348, 747, 1250, 1259, 2033
BmiI	GGNNCC	4 cut(s)	326, 349, 977, 1139
BmrFI	CCNGG	6 cut(s)	112, 345, 519, 728, 948, 1516
BmsI	GCATC	4 cut(s)	32, 789, 1104, 1119
BmtI	GCTAGC	1 cut(s)	315
BpiI	GAAGAC	2 cut(s)	888, 1807
BplI	GAGNNNNNCTC	4 cut(s)	808, 840, 1001, 1033
BpmI	CTGGAG	3 cut(s)	133, 340, 382
Bpu10I	CCTNAGC	1 cut(s)	768
BpuEI	CTTGAG	1 cut(s)	1923
BpuMI	CCSGG	1 cut(s)	519
BsaAI	YACGTR	1 cut(s)	903
BsaBI	GATNNNNATC	1 cut(s)	1083
BsaHI	GRCGYC	1 cut(s)	367
BsaI	GGTCTC	4 cut(s)	109, 459, 1034, 1783
BsaJI	CCNNGG	8 cut(s)	344, 702, 726, 727, 947, 1069, 1515, 2036
BsaWI	WCCGGW	2 cut(s)	581, 913
BsaXI	ACNNNNNCTCC	4 cut(s)	1730, 1760, 2010, 2040
Bsc4I	CCNNNNNNNGG	4 cut(s)	344, 345, 360, 518
Bse118I	RCCGGY	1 cut(s)	913
Bse1I	ACTGG	5 cut(s)	354, 572, 1732, 2076, 2123
Bse3DI	GCAATG	1 cut(s)	1139
Bse8I	GATNNNNATC	1 cut(s)	1083
BseBI	CCWGG	5 cut(s)	112, 345, 728, 948, 1516
BseDI	CCNNGG	8 cut(s)	344, 702, 726, 727, 947, 1069, 1515, 2036
BseGI	GGATG	3 cut(s)	68, 1652, 2072
BseJI	GATNNNNATC	1 cut(s)	1083
BseLI	CCNNNNNNNGG	4 cut(s)	344, 345, 360, 518
BseMI	GCAATG	1 cut(s)	1139
BseMII	CTCAG	4 cut(s)	782, 971, 1434, 1877
BseNI	ACTGG	5 cut(s)	354, 572, 1732, 2076, 2123
BseRI	GAGGAG	1 cut(s)	378
BseXI	GCAGC	5 cut(s)	189, 245, 703, 1473, 1543
BseYI	CCCAGC	1 cut(s)	1482
BsgI	GTGCAG	3 cut(s)	892, 1830, 2078
BshFI	GGCC	7 cut(s)	522, 693, 749, 1074, 1252, 1969, 2034
BshNI	GGYRCC	3 cut(s)	324, 975, 1137
BshTI	ACCGGT	1 cut(s)	913
BsiHKAI	GWGCWC	2 cut(s)	8, 821
BsiHKCI	CYCGRG	2 cut(s)	621, 825
BsiSI	CCGG	4 cut(s)	371, 519, 582, 914
BslFI	GGGAC	3 cut(s)	205, 1097, 1912
BslI	CCNNNNNNNGG	4 cut(s)	344, 345, 360, 518
BsmFI	GGGAC	3 cut(s)	205, 1097, 1912
BsmI	GAATGC	1 cut(s)	1873
BsnI	GGCC	7 cut(s)	522, 693, 749, 1074, 1252, 1969, 2034
Bso31I	GGTCTC	4 cut(s)	109, 459, 1034, 1783
BsoBI	CYCGRG	2 cut(s)	621, 825
Bsp1286I	GDGCHC	2 cut(s)	8, 821
Bsp143I	GATC	9 cut(s)	939, 951, 970, 1225, 1332, 1426, 1874, 1932, 2006
Bsp19I	CCATGG	1 cut(s)	702
BspACI	CCGC	3 cut(s)	351, 1020, 1388
BspANI	GGCC	7 cut(s)	522, 693, 749, 1074, 1252, 1969, 2034
BspCNI	CTCAG	4 cut(s)	781, 972, 1433, 1876
BspHI	TCATGA	1 cut(s)	1921
BspLI	GGNNCC	4 cut(s)	326, 349, 977, 1139
BspMAI	CTGCAG	1 cut(s)	1491
BspOI	GCTAGC	1 cut(s)	315
BspPI	GGATC	4 cut(s)	934, 959, 1233, 2014
BspQI	GCTCTTC	1 cut(s)	634
BspT107I	GGYRCC	3 cut(s)	324, 975, 1137
BspTNI	GGTCTC	4 cut(s)	109, 459, 1034, 1783
BsrDI	GCAATG	1 cut(s)	1139
BsrFI	RCCGGY	1 cut(s)	913
BsrI	ACTGG	5 cut(s)	354, 572, 1732, 2076, 2123
BssAI	RCCGGY	1 cut(s)	913
BssECI	CCNNGG	8 cut(s)	344, 702, 726, 727, 947, 1069, 1515, 2036
BssMI	GATC	9 cut(s)	939, 951, 970, 1225, 1332, 1426, 1874, 1932, 2006
BssNI	GRCGYC	1 cut(s)	367
BssT1I	CCWWGG	2 cut(s)	702, 2036
Bst2UI	CCWGG	5 cut(s)	112, 345, 728, 948, 1516
Bst4CI	ACNGT	3 cut(s)	104, 1150, 2065
Bst6I	CTCTTC	3 cut(s)	611, 634, 965
BstACI	GRCGYC	1 cut(s)	367
BstBAI	YACGTR	1 cut(s)	903
BstC8I	GCNNGC	2 cut(s)	313, 1024
BstDEI	CTNAG	6 cut(s)	768, 980, 1184, 1280, 1420, 1863
BstDSI	CCRYGG	1 cut(s)	702
BstF5I	GGATG	3 cut(s)	68, 1652, 2072
BstKTI	GATC	9 cut(s)	942, 954, 973, 1228, 1335, 1429, 1877, 1935, 2009
BstMBI	GATC	9 cut(s)	939, 951, 970, 1225, 1332, 1426, 1874, 1932, 2006
BstMWI	GCNNNNNNNGC	1 cut(s)	312
BstNI	CCWGG	5 cut(s)	112, 345, 728, 948, 1516
BstNSI	RCATGY	1 cut(s)	476
BstSCI	CCNGG	6 cut(s)	110, 343, 517, 726, 946, 1514
BstSFI	CTRYAG	1 cut(s)	1487
BstSNI	TACGTA	1 cut(s)	903
BstV1I	GCAGC	5 cut(s)	189, 245, 703, 1473, 1543
BstV2I	GAAGAC	2 cut(s)	888, 1807
BstX2I	RGATCY	2 cut(s)	951, 2006
BstXI	CCANNNNNNTGG	2 cut(s)	1606, 1727
BstYI	RGATCY	2 cut(s)	951, 2006
BsuI	GTATCC	1 cut(s)	1132
BsuRI	GGCC	7 cut(s)	522, 693, 749, 1074, 1252, 1969, 2034
BtgI	CCRYGG	1 cut(s)	702
BtsCI	GGATG	3 cut(s)	68, 1652, 2072
BtsI	GCAGTG	1 cut(s)	1321
BtsIMutI	CAGTG	4 cut(s)	361, 1155, 1321, 1725
Cac8I	GCNNGC	2 cut(s)	313, 1024
CaiI	CAGNNNCTG	1 cut(s)	360
CciI	TCATGA	1 cut(s)	1921
Cfr10I	RCCGGY	1 cut(s)	913
Cfr13I	GGNCC	5 cut(s)	348, 747, 1250, 1259, 2033
CseI	GACGC	1 cut(s)	356
Csp6I	GTAC	7 cut(s)	565, 676, 773, 904, 936, 976, 1765
CspAI	ACCGGT	1 cut(s)	913
CspCI	CAANNNNNGTGG	2 cut(s)	289, 324
CviAII	CATG	9 cut(s)	473, 703, 1168, 1382, 1435, 1742, 1782, 1922, 2051
CviQI	GTAC	7 cut(s)	565, 676, 773, 904, 936, 976, 1765
DdeI	CTNAG	6 cut(s)	768, 980, 1184, 1280, 1420, 1863
DpnI	GATC	9 cut(s)	941, 953, 972, 1227, 1334, 1428, 1876, 1934, 2008
DpnII	GATC	9 cut(s)	939, 951, 970, 1225, 1332, 1426, 1874, 1932, 2006
DraIII	CACNNNGTG	1 cut(s)	1037
EaeI	YGGCCR	1 cut(s)	691
Eam1104I	CTCTTC	3 cut(s)	611, 634, 965
EarI	CTCTTC	3 cut(s)	611, 634, 965
EciI	GGCGGA	2 cut(s)	340, 1377
Ecl136II	GAGCTC	1 cut(s)	819
Eco105I	TACGTA	1 cut(s)	903
Eco130I	CCWWGG	2 cut(s)	702, 2036
Eco147I	AGGCCT	2 cut(s)	1074, 1969
Eco24I	GRGCYC	1 cut(s)	821
Eco31I	GGTCTC	4 cut(s)	109, 459, 1034, 1783
Eco32I	GATATC	2 cut(s)	158, 1894
Eco47I	GGWCC	2 cut(s)	348, 1259
Eco53kI	GAGCTC	1 cut(s)	819
Eco57I	CTGAAG	1 cut(s)	1997
Eco88I	CYCGRG	2 cut(s)	621, 825
EcoICRI	GAGCTC	1 cut(s)	819
EcoO109I	RGGNCCY	1 cut(s)	1250
EcoRII	CCWGG	5 cut(s)	110, 343, 726, 946, 1514
EcoRV	GATATC	2 cut(s)	158, 1894
EcoT14I	CCWWGG	2 cut(s)	702, 2036
EcoT22I	ATGCAT	1 cut(s)	804
EcoT38I	GRGCYC	1 cut(s)	821
ErhI	CCWWGG	2 cut(s)	702, 2036
FaeI	CATG	9 cut(s)	476, 706, 1171, 1385, 1438, 1745, 1785, 1925, 2054
FalI	AAGNNNNNCTT	2 cut(s)	534, 566
FaqI	GGGAC	3 cut(s)	205, 1097, 1912
FatI	CATG	9 cut(s)	472, 702, 1167, 1381, 1434, 1741, 1781, 1921, 2050
FauNDI	CATATG	2 cut(s)	804, 1507
Fnu4HI	GCNGC	5 cut(s)	203, 234, 717, 1487, 1532
FokI	GGATG	3 cut(s)	75, 1639, 2059
FriOI	GRGCYC	1 cut(s)	821
Fsp4HI	GCNGC	5 cut(s)	203, 234, 717, 1487, 1532
FspBI	CTAG	9 cut(s)	50, 312, 809, 1076, 1092, 1116, 1613, 1806, 1965
GluI	GCNGC	5 cut(s)	203, 234, 717, 1487, 1532
GsaI	CCCAGC	1 cut(s)	1486
GsuI	CTGGAG	3 cut(s)	133, 340, 382
HaeIII	GGCC	7 cut(s)	522, 693, 749, 1074, 1252, 1969, 2034
HapII	CCGG	4 cut(s)	371, 519, 582, 914
HgaI	GACGC	1 cut(s)	356
Hin1I	GRCGYC	1 cut(s)	367
Hin1II	CATG	9 cut(s)	476, 706, 1171, 1385, 1438, 1745, 1785, 1925, 2054
HincII	GTYRAC	1 cut(s)	579
HindII	GTYRAC	1 cut(s)	579
HindIII	AAGCTT	2 cut(s)	304, 548
HinfI	GANTC	4 cut(s)	107, 662, 1925, 2102
HpaI	GTTAAC	1 cut(s)	579
HpaII	CCGG	4 cut(s)	371, 519, 582, 914
HphI	GGTGA	7 cut(s)	116, 805, 1023, 1312, 1423, 1587, 1742
Hpy166II	GTNNAC	2 cut(s)	579, 1733
Hpy188I	TCNGA	6 cut(s)	155, 267, 661, 1346, 1866, 2011
Hpy188III	TCNNGA	6 cut(s)	161, 217, 319, 361, 1414, 1922
Hpy8I	GTNNAC	2 cut(s)	579, 1733
Hpy99I	CGWCG	1 cut(s)	661
HpyAV	CCTTC	8 cut(s)	134, 262, 953, 1241, 1420, 1479, 1759, 1844
HpyCH4III	ACNGT	3 cut(s)	104, 1150, 2065
HpyCH4IV	ACGT	4 cut(s)	656, 881, 902, 1003
HpyF10VI	GCNNNNNNNGC	1 cut(s)	312
HpyF3I	CTNAG	6 cut(s)	768, 980, 1184, 1280, 1420, 1863
HpySE526I	ACGT	4 cut(s)	656, 881, 902, 1003
Hsp92I	GRCGYC	1 cut(s)	367
Hsp92II	CATG	9 cut(s)	476, 706, 1171, 1385, 1438, 1745, 1785, 1925, 2054
KpnI	GGTACC	1 cut(s)	979
KspAI	GTTAAC	1 cut(s)	579
Kzo9I	GATC	9 cut(s)	939, 951, 970, 1225, 1332, 1426, 1874, 1932, 2006
LguI	GCTCTTC	1 cut(s)	634
LmnI	GCTCC	3 cut(s)	391, 412, 816
Lsp1109I	GCAGC	5 cut(s)	189, 245, 703, 1473, 1543
LweI	GCATC	4 cut(s)	32, 789, 1104, 1119
MaeI	CTAG	9 cut(s)	50, 312, 809, 1076, 1092, 1116, 1613, 1806, 1965
MaeII	ACGT	4 cut(s)	656, 881, 902, 1003
MaeIII	GTNAC	4 cut(s)	400, 1150, 1462, 1510
MalI	GATC	9 cut(s)	941, 953, 972, 1227, 1334, 1428, 1876, 1934, 2008
MboI	GATC	9 cut(s)	939, 951, 970, 1225, 1332, 1426, 1874, 1932, 2006
MfeI	CAATTG	1 cut(s)	867
MflI	RGATCY	2 cut(s)	951, 2006
MhlI	GDGCHC	2 cut(s)	8, 821
MlyI	GAGTC	3 cut(s)	671, 1934, 2111
MmeI	TCCRAC	2 cut(s)	40, 639
Mph1103I	ATGCAT	1 cut(s)	804
MseI	TTAA	6 cut(s)	578, 653, 921, 1191, 1575, 2115
MslI	CAYNNNNRTG	4 cut(s)	593, 914, 1740, 1920
MspA1I	CMGCKG	2 cut(s)	1424, 1486
MspI	CCGG	4 cut(s)	371, 519, 582, 914
MspR9I	CCNGG	6 cut(s)	112, 345, 519, 728, 948, 1516
MunI	CAATTG	1 cut(s)	867
Mva1269I	GAATGC	1 cut(s)	1873
MvaI	CCWGG	5 cut(s)	112, 345, 728, 948, 1516
MwoI	GCNNNNNNNGC	1 cut(s)	312
NciI	CCSGG	1 cut(s)	519
NcoI	CCATGG	1 cut(s)	702
NdeI	CATATG	2 cut(s)	804, 1507
NdeII	GATC	9 cut(s)	939, 951, 970, 1225, 1332, 1426, 1874, 1932, 2006
NheI	GCTAGC	1 cut(s)	311
NlaIII	CATG	9 cut(s)	476, 706, 1171, 1385, 1438, 1745, 1785, 1925, 2054
NlaIV	GGNNCC	4 cut(s)	326, 349, 977, 1139
NmeAIII	GCCGAG	3 cut(s)	669, 1033, 1094
NmuCI	GTSAC	4 cut(s)	400, 1150, 1462, 1510
NsiI	ATGCAT	1 cut(s)	804
NspI	RCATGY	1 cut(s)	476
OliI	CACNNNNGTG	1 cut(s)	914
PaeR7I	CTCGAG	1 cut(s)	621
PagI	TCATGA	1 cut(s)	1921
PasI	CCCWGGG	1 cut(s)	727
PceI	AGGCCT	2 cut(s)	1074, 1969
PciI	ACATGT	1 cut(s)	472
PciSI	GCTCTTC	1 cut(s)	634
PcsI	WCGNNNNNNNCGW	2 cut(s)	662, 899
PctI	GAATGC	1 cut(s)	1873
PfeI	GAWTC	1 cut(s)	107
PflMI	CCANNNNNTGG	1 cut(s)	360
PfoI	TCCNGGA	1 cut(s)	110
PinAI	ACCGGT	1 cut(s)	913
PkrI	GCNGC	5 cut(s)	204, 235, 718, 1488, 1533
PleI	GAGTC	3 cut(s)	670, 1933, 2110
PpsI	GAGTC	3 cut(s)	670, 1933, 2110
Ppu21I	YACGTR	1 cut(s)	903
PscI	ACATGT	1 cut(s)	472
PsiI	TTATAA	1 cut(s)	1083
Psp124BI	GAGCTC	1 cut(s)	821
Psp6I	CCWGG	5 cut(s)	110, 343, 726, 946, 1514
PspFI	CCCAGC	1 cut(s)	1482
PspGI	CCWGG	5 cut(s)	110, 343, 726, 946, 1514
PspN4I	GGNNCC	4 cut(s)	326, 349, 977, 1139
PspPI	GGNCC	5 cut(s)	348, 747, 1250, 1259, 2033
PspXI	VCTCGAGB	1 cut(s)	621
PstI	CTGCAG	1 cut(s)	1491
PstNI	CAGNNNCTG	1 cut(s)	360
PsuI	RGATCY	2 cut(s)	951, 2006
PvuII	CAGCTG	2 cut(s)	1424, 1486
RsaI	GTAC	7 cut(s)	566, 677, 774, 905, 937, 977, 1766
RsaNI	GTAC	7 cut(s)	565, 676, 773, 904, 936, 976, 1765
RseI	CAYNNNNRTG	4 cut(s)	593, 914, 1740, 1920
SacI	GAGCTC	1 cut(s)	821
SapI	GCTCTTC	1 cut(s)	634
SaqAI	TTAA	6 cut(s)	578, 653, 921, 1191, 1575, 2115
SatI	GCNGC	5 cut(s)	203, 234, 717, 1487, 1532
Sau3AI	GATC	9 cut(s)	939, 951, 970, 1225, 1332, 1426, 1874, 1932, 2006
Sau96I	GGNCC	5 cut(s)	348, 747, 1250, 1259, 2033
SchI	GAGTC	3 cut(s)	671, 1934, 2111
ScrFI	CCNGG	6 cut(s)	112, 345, 519, 728, 948, 1516
SduI	GDGCHC	2 cut(s)	8, 821
SfaNI	GCATC	4 cut(s)	32, 789, 1104, 1119
SfcI	CTRYAG	1 cut(s)	1487
Sfr274I	CTCGAG	1 cut(s)	621
SgrAI	CRCCGGYG	1 cut(s)	913
SinI	GGWCC	2 cut(s)	348, 1259
SlaI	CTCGAG	1 cut(s)	621
SmiMI	CAYNNNNRTG	4 cut(s)	593, 914, 1740, 1920
SmlI	CTYRAG	2 cut(s)	621, 1938
SmoI	CTYRAG	2 cut(s)	621, 1938
SnaBI	TACGTA	1 cut(s)	903
SseBI	AGGCCT	2 cut(s)	1074, 1969
SsiI	CCGC	3 cut(s)	351, 1020, 1388
SspMI	CTAG	9 cut(s)	50, 312, 809, 1076, 1092, 1116, 1613, 1806, 1965
SstI	GAGCTC	1 cut(s)	821
StuI	AGGCCT	2 cut(s)	1074, 1969
StyD4I	CCNGG	6 cut(s)	110, 343, 517, 726, 946, 1514
StyI	CCWWGG	2 cut(s)	702, 2036
TaaI	ACNGT	3 cut(s)	104, 1150, 2065
TaiI	ACGT	4 cut(s)	659, 884, 905, 1006
TaqI	TCGA	8 cut(s)	160, 287, 622, 632, 665, 1716, 1845, 1896
TfiI	GAWTC	1 cut(s)	107
Tru1I	TTAA	6 cut(s)	578, 653, 921, 1191, 1575, 2115
Tru9I	TTAA	6 cut(s)	578, 653, 921, 1191, 1575, 2115
TscAI	CASTG	4 cut(s)	361, 1155, 1321, 1732
TseFI	GTSAC	4 cut(s)	400, 1150, 1462, 1510
TseI	GCWGC	5 cut(s)	202, 233, 716, 1486, 1531
Tsp45I	GTSAC	4 cut(s)	400, 1150, 1462, 1510
TspDTI	ATGAA	9 cut(s)	28, 217, 542, 952, 1257, 1741, 1786, 1807, 2061
TspRI	CASTG	4 cut(s)	361, 1155, 1321, 1732
Van91I	CCANNNNNTGG	1 cut(s)	360
VpaK11BI	GGWCC	2 cut(s)	348, 1259
XapI	RAATTY	1 cut(s)	1983
XceI	RCATGY	1 cut(s)	476
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1955
XhoI	CTCGAG	1 cut(s)	621
XspI	CTAG	9 cut(s)	50, 312, 809, 1076, 1092, 1116, 1613, 1806, 1965
Zsp2I	ATGCAT	1 cut(s)	804

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.