MD02G1263200.v1.1

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Forward (+)
31759248 .. 31760604
1357 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1263200.v1.1.491

Sequence Viewer

Length: 1092 bp
ATGTCCAGTGGAAAACTCTCAGATGCATTCAAATCCCACCCTATCTTTCTCCACAAGCAACAGCCAGACGACTTCAGCTCATTGCAGGAATTGCCGAAGTCGTATGCATGGACGTCACAGCTGAACGAATATCCATCTTTCGAATCATTATCTTGCTCAGAGTCTGTGCCGGTAATCGATCTCACCGACCCAAATGTCGTTGAACTCGTAGGACATGCATGCAAGACTTGGGGCATGTTCCAGGCCACAAACCATGGCGTCCCTCAAAAACTTGTTGACGACATGGAATCTACTGTTCGAAGCCTTTTCTCTCTGCCACCCCAACAAAAGCTCAAAGCAGCTCGATTGCCCGATGGCTTTTCCGGCTACGGTTTCCATCGCATATCTGCCTTTTGTGAAAAGCTAATGTGGTCTGAGAGCTTCACTACCGTTGGCTCACCACTTGAACATTTTCGCCAACTTTGGCCCCAAGATTACACCAAGTTCTGTTGTATTGCTGAAGAATATGAGAGAGAGATGATAAGGCTTGCGGCTAAGTTGATGTGGCTAATGCTTGGCTCATTAGGCATATCCAAGGAAGACATCAAATGGGCGGGTCCAAGAGGTGAATTTGAAGATGCATCTGCAGTCTTACAATTCAACTCTTACCCAGCTTGTCCGGATCCGGATCGGACCATAGGTCTTGCCCAACATACCGATTCAAGCCTCATTTCAATCGTCCACCAAAGCAGTAACGCCAGTGGCTTGCAAGTTTTCCGACAGGGGGAGGAGGAGGGCCGTGGGTGGCTTATGGTTCCACCAGTCCCTGGGGCTTTCGTGATCAATGTGGGTGACTTCATGCACATGCTATCAAACGGATTGTACCAGAATGTCTTTCACCGGGCAGTGGTGAACCGAAGCCAGCACCGCGTATCAGTCGCTTGCTTATATGGTCCTCCGGAGAATGCTCAGGTCTCACCCCTCTCAAAATTACTTGGCCCGAGCTGTCCTCCGCTGTACCCGCCGCTCACTTGGAATGAGTACCTTGGAACAAAGGCAAAGCTTCACAACAAGGCACTTGAATCACTCCGACTGTGTGCTCCTCCGAATTAG

Protein Analysis

364

Amino Acids

40.52

Weight (kDa)

6.06

Isoelectric Point (pI)

49.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 56 - 157 9.2e-21 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 210 - 312 3.7e-29 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 194
AatII GACGTC 1 cut(s) 116
AccB7I CCANNNNNTGG 1 cut(s) 806
AccBSI CCGCTC 1 cut(s) 1006
AccII CGCG 1 cut(s) 909
AccIII TCCGGA 3 cut(s) 658, 664, 937
AciI CCGC 6 cut(s) 530, 593, 907, 992, 1001, 1004
AclWI GGATC 3 cut(s) 656, 669, 675
AcsI RAATTY 1 cut(s) 608
AcuI CTGAAG 2 cut(s) 58, 519
AcyI GRCGYC 2 cut(s) 113, 258
AfaI GTAC 3 cut(s) 863, 998, 1022
AfiI CCNNNNNNNGG 3 cut(s) 763, 806, 886
AgsI TTSAA 8 cut(s) 31, 203, 446, 614, 640, 702, 714, 1061
AhdI GACNNNNNGTC 1 cut(s) 678
AjnI CCWGG 2 cut(s) 240, 805
AluBI AGCT 9 cut(s) 78, 121, 331, 341, 403, 420, 653, 984, 1042
AluI AGCT 9 cut(s) 78, 121, 331, 341, 403, 420, 653, 984, 1042
Alw21I GWGCWC 1 cut(s) 1081
Alw26I GTCTC 1 cut(s) 958
AlwI GGATC 3 cut(s) 656, 669, 675
AlwNI CAGNNNCTG 2 cut(s) 164, 806
Ama87I CYCGRG 1 cut(s) 979
Aor13HI TCCGGA 3 cut(s) 658, 664, 937
AoxI GGCC 4 cut(s) 243, 464, 775, 976
ApeKI GCWGC 1 cut(s) 338
ApoI RAATTY 1 cut(s) 608
Asp700I GAANNNNTTC 1 cut(s) 450
AspS9I GGNCC 6 cut(s) 465, 596, 672, 775, 932, 977
AsuC2I CCSGG 1 cut(s) 881
AsuHPI GGTGA 7 cut(s) 175, 429, 617, 842, 869, 901, 948
AsuII TTCGAA 2 cut(s) 141, 298
AvaI CYCGRG 1 cut(s) 979
AvaII GGWCC 3 cut(s) 596, 672, 932
BamHI GGATCC 1 cut(s) 661
BbsI GAAGAC 1 cut(s) 585
Bbv12I GWGCWC 1 cut(s) 1081
BbvI GCAGC 1 cut(s) 350
BccI CCATC 3 cut(s) 142, 347, 384
BceAI ACGGC 1 cut(s) 762
BciT130I CCWGG 2 cut(s) 242, 807
BclI TGATCA 1 cut(s) 819
BcnI CCSGG 1 cut(s) 881
BcoDI GTCTC 1 cut(s) 958
BfmI CTRYAG 1 cut(s) 624
BisI GCNGC 3 cut(s) 339, 531, 1004
BlsI GCNGC 3 cut(s) 340, 532, 1005
Bme1390I CCNGG 3 cut(s) 242, 807, 881
Bme18I GGWCC 3 cut(s) 596, 672, 932
BmeRI GACNNNNNGTC 1 cut(s) 678
BmeT110I CYCGRG 1 cut(s) 979
BmgT120I GGNCC 6 cut(s) 465, 596, 672, 775, 932, 977
BmiI GGNNCC 4 cut(s) 467, 597, 663, 795
BmrFI CCNGG 3 cut(s) 242, 807, 881
BmsI GCATC 3 cut(s) 13, 607, 629
BpiI GAAGAC 1 cut(s) 585
BplI GAGNNNNNCTC 2 cut(s) 973, 1005
Bpu10I CCTNAGC 1 cut(s) 948
Bpu14I TTCGAA 2 cut(s) 141, 298
BpuMI CCSGG 1 cut(s) 881
Bsa29I ATCGAT 1 cut(s) 177
BsaBI GATNNNNATC 1 cut(s) 666
BsaHI GRCGYC 2 cut(s) 113, 258
BsaI GGTCTC 1 cut(s) 958
BsaJI CCNNGG 6 cut(s) 253, 573, 778, 805, 806, 1024
BsaWI WCCGGW 3 cut(s) 658, 664, 937
Bsc4I CCNNNNNNNGG 3 cut(s) 763, 806, 886
Bse118I RCCGGY 1 cut(s) 169
Bse1I ACTGG 3 cut(s) 6, 738, 800
Bse3DI GCAATG 1 cut(s) 80
Bse8I GATNNNNATC 1 cut(s) 666
BseAI TCCGGA 3 cut(s) 658, 664, 937
BseBI CCWGG 2 cut(s) 242, 807
BseCI ATCGAT 1 cut(s) 177
BseDI CCNNGG 6 cut(s) 253, 573, 778, 805, 806, 1024
BseJI GATNNNNATC 1 cut(s) 666
BseLI CCNNNNNNNGG 3 cut(s) 763, 806, 886
BseMI GCAATG 1 cut(s) 80
BseMII CTCAG 4 cut(s) 33, 171, 405, 962
BseNI ACTGG 3 cut(s) 6, 738, 800
BseRI GAGGAG 3 cut(s) 782, 785, 1071
BseXI GCAGC 1 cut(s) 350
BseYI CCCAGC 1 cut(s) 649
Bsh1236I CGCG 1 cut(s) 909
BshFI GGCC 4 cut(s) 245, 466, 777, 978
BshVI ATCGAT 1 cut(s) 177
BsiHKAI GWGCWC 1 cut(s) 1081
BsiHKCI CYCGRG 1 cut(s) 979
BsiSI CCGG 6 cut(s) 170, 363, 659, 665, 880, 938
BslFI GGGAC 2 cut(s) 245, 788
BslI CCNNNNNNNGG 3 cut(s) 763, 806, 886
BsmAI GTCTC 1 cut(s) 958
BsmFI GGGAC 2 cut(s) 245, 788
BsmI GAATGC 2 cut(s) 26, 949
BsnI GGCC 4 cut(s) 245, 466, 777, 978
Bso31I GGTCTC 1 cut(s) 958
BsoBI CYCGRG 1 cut(s) 979
Bsp119I TTCGAA 2 cut(s) 141, 298
Bsp1286I GDGCHC 1 cut(s) 1081
Bsp13I TCCGGA 3 cut(s) 658, 664, 937
Bsp143I GATC 4 cut(s) 178, 661, 667, 819
Bsp19I CCATGG 1 cut(s) 253
BspACI CCGC 6 cut(s) 530, 593, 907, 992, 1001, 1004
BspANI GGCC 4 cut(s) 245, 466, 777, 978
BspCNI CTCAG 4 cut(s) 32, 170, 406, 961
BspDI ATCGAT 1 cut(s) 177
BspEI TCCGGA 3 cut(s) 658, 664, 937
BspFNI CGCG 1 cut(s) 909
BspLI GGNNCC 4 cut(s) 467, 597, 663, 795
BspMAI CTGCAG 1 cut(s) 628
BspPI GGATC 3 cut(s) 656, 669, 675
BspT104I TTCGAA 2 cut(s) 141, 298
BspTNI GGTCTC 1 cut(s) 958
BsrBI CCGCTC 1 cut(s) 1006
BsrDI GCAATG 1 cut(s) 80
BsrFI RCCGGY 1 cut(s) 169
BsrI ACTGG 3 cut(s) 6, 738, 800
BssAI RCCGGY 1 cut(s) 169
BssECI CCNNGG 6 cut(s) 253, 573, 778, 805, 806, 1024
BssMI GATC 4 cut(s) 178, 661, 667, 819
BssNI GRCGYC 2 cut(s) 113, 258
BssT1I CCWWGG 3 cut(s) 253, 573, 1024
Bst2UI CCWGG 2 cut(s) 242, 807
Bst4CI ACNGT 4 cut(s) 295, 371, 430, 1074
BstACI GRCGYC 2 cut(s) 113, 258
BstAPI GCANNNNNTGC 1 cut(s) 91
BstBI TTCGAA 2 cut(s) 141, 298
BstC8I GCNNGC 5 cut(s) 220, 528, 746, 902, 922
BstDEI CTNAG 5 cut(s) 19, 157, 414, 534, 948
BstDSI CCRYGG 2 cut(s) 253, 778
BstFNI CGCG 1 cut(s) 909
BstKTI GATC 4 cut(s) 181, 664, 670, 822
BstMAI GTCTC 1 cut(s) 958
BstMBI GATC 4 cut(s) 178, 661, 667, 819
BstMWI GCNNNNNNNGC 5 cut(s) 91, 363, 564, 906, 1000
BstNI CCWGG 2 cut(s) 242, 807
BstNSI RCATGY 4 cut(s) 218, 222, 238, 847
BstSCI CCNGG 3 cut(s) 240, 805, 879
BstSFI CTRYAG 1 cut(s) 624
BstUI CGCG 1 cut(s) 909
BstV1I GCAGC 1 cut(s) 350
BstV2I GAAGAC 1 cut(s) 585
BstX2I RGATCY 1 cut(s) 661
BstYI RGATCY 1 cut(s) 661
Bsu15I ATCGAT 1 cut(s) 177
BsuRI GGCC 4 cut(s) 245, 466, 777, 978
BsuTUI ATCGAT 1 cut(s) 177
BtgI CCRYGG 2 cut(s) 253, 778
BtgZI GCGATG 1 cut(s) 362
BtsI GCAGTG 1 cut(s) 891
BtsIMutI CAGTG 3 cut(s) 13, 745, 891
Cac8I GCNNGC 5 cut(s) 220, 528, 746, 902, 922
CaiI CAGNNNCTG 2 cut(s) 164, 806
Cfr10I RCCGGY 1 cut(s) 169
Cfr13I GGNCC 6 cut(s) 465, 596, 672, 775, 932, 977
ClaI ATCGAT 1 cut(s) 177
CseI GACGC 1 cut(s) 247
Csp6I GTAC 3 cut(s) 862, 997, 1021
CviAII CATG 8 cut(s) 108, 215, 219, 235, 254, 283, 838, 844
CviQI GTAC 3 cut(s) 862, 997, 1021
DdeI CTNAG 5 cut(s) 19, 157, 414, 534, 948
DpnI GATC 4 cut(s) 180, 663, 669, 821
DpnII GATC 4 cut(s) 178, 661, 667, 819
DrdI GACNNNNNNGTC 1 cut(s) 194
DriI GACNNNNNGTC 1 cut(s) 678
DseDI GACNNNNNNGTC 1 cut(s) 194
Eam1105I GACNNNNNGTC 1 cut(s) 678
Eco130I CCWWGG 3 cut(s) 253, 573, 1024
Eco31I GGTCTC 1 cut(s) 958
Eco47I GGWCC 3 cut(s) 596, 672, 932
Eco57I CTGAAG 2 cut(s) 58, 519
Eco88I CYCGRG 1 cut(s) 979
EcoRII CCWGG 2 cut(s) 240, 805
EcoT14I CCWWGG 3 cut(s) 253, 573, 1024
EcoT22I ATGCAT 4 cut(s) 28, 109, 220, 622
ErhI CCWWGG 3 cut(s) 253, 573, 1024
FaeI CATG 8 cut(s) 111, 218, 222, 238, 257, 286, 841, 847
FaqI GGGAC 2 cut(s) 245, 788
FatI CATG 8 cut(s) 107, 214, 218, 234, 253, 282, 837, 843
FauI CCCGC 2 cut(s) 586, 1008
FbaI TGATCA 1 cut(s) 819
Fnu4HI GCNGC 3 cut(s) 339, 531, 1004
Fsp4HI GCNGC 3 cut(s) 339, 531, 1004
GluI GCNGC 3 cut(s) 339, 531, 1004
GsaI CCCAGC 1 cut(s) 653
HaeIII GGCC 4 cut(s) 245, 466, 777, 978
HapII CCGG 6 cut(s) 170, 363, 659, 665, 880, 938
HgaI GACGC 1 cut(s) 247
Hin1I GRCGYC 2 cut(s) 113, 258
Hin1II CATG 8 cut(s) 111, 218, 222, 238, 257, 286, 841, 847
HincII GTYRAC 1 cut(s) 277
HindII GTYRAC 1 cut(s) 277
HindIII AAGCTT 1 cut(s) 1040
HinfI GANTC 5 cut(s) 143, 161, 287, 698, 1061
HpaII CCGG 6 cut(s) 170, 363, 659, 665, 880, 938
HphI GGTGA 7 cut(s) 175, 429, 617, 842, 869, 901, 948
Hpy166II GTNNAC 3 cut(s) 277, 721, 892
Hpy188I TCNGA 7 cut(s) 22, 160, 415, 672, 758, 1070, 1086
Hpy188III TCNNGA 4 cut(s) 659, 665, 817, 938
Hpy8I GTNNAC 3 cut(s) 277, 721, 892
HpyCH4III ACNGT 4 cut(s) 295, 371, 430, 1074
HpyCH4IV ACGT 1 cut(s) 113
HpyCH4V TGCA 9 cut(s) 26, 85, 107, 218, 222, 620, 626, 748, 841
HpyF10VI GCNNNNNNNGC 5 cut(s) 91, 363, 564, 906, 1000
HpyF3I CTNAG 5 cut(s) 19, 157, 414, 534, 948
HpySE526I ACGT 1 cut(s) 113
Hsp92I GRCGYC 2 cut(s) 113, 258
Hsp92II CATG 8 cut(s) 111, 218, 222, 238, 257, 286, 841, 847
Kpn2I TCCGGA 3 cut(s) 658, 664, 937
Ksp22I TGATCA 1 cut(s) 819
Kzo9I GATC 4 cut(s) 178, 661, 667, 819
LmnI GCTCC 1 cut(s) 1084
Lsp1109I GCAGC 1 cut(s) 350
LweI GCATC 3 cut(s) 13, 607, 629
MaeII ACGT 1 cut(s) 113
MaeIII GTNAC 3 cut(s) 114, 731, 830
MalI GATC 4 cut(s) 180, 663, 669, 821
MbiI CCGCTC 1 cut(s) 1006
MboI GATC 4 cut(s) 178, 661, 667, 819
MboII GAAGA 3 cut(s) 512, 590, 626
MflI RGATCY 1 cut(s) 661
MhlI GDGCHC 1 cut(s) 1081
MluCI AATT 5 cut(s) 89, 608, 635, 968, 1087
MlyI GAGTC 1 cut(s) 170
MmeI TCCRAC 1 cut(s) 781
Mph1103I ATGCAT 4 cut(s) 28, 109, 220, 622
MroI TCCGGA 3 cut(s) 658, 664, 937
MroXI GAANNNNTTC 1 cut(s) 450
MslI CAYNNNNRTG 1 cut(s) 842
MspA1I CMGCKG 2 cut(s) 121, 994
MspI CCGG 6 cut(s) 170, 363, 659, 665, 880, 938
MspR9I CCNGG 3 cut(s) 242, 807, 881
Mva1269I GAATGC 2 cut(s) 26, 949
MvaI CCWGG 2 cut(s) 242, 807
MvnI CGCG 1 cut(s) 909
MwoI GCNNNNNNNGC 5 cut(s) 91, 363, 564, 906, 1000
NciI CCSGG 1 cut(s) 881
NcoI CCATGG 1 cut(s) 253
NdeII GATC 4 cut(s) 178, 661, 667, 819
NlaIII CATG 8 cut(s) 111, 218, 222, 238, 257, 286, 841, 847
NlaIV GGNNCC 4 cut(s) 467, 597, 663, 795
NmuCI GTSAC 2 cut(s) 114, 830
NsiI ATGCAT 4 cut(s) 28, 109, 220, 622
NspI RCATGY 4 cut(s) 218, 222, 238, 847
NspV TTCGAA 2 cut(s) 141, 298
PaeI GCATGC 1 cut(s) 222
PasI CCCWGGG 1 cut(s) 806
PcsI WCGNNNNNNNCGW 2 cut(s) 183, 204
PctI GAATGC 2 cut(s) 26, 949
PdmI GAANNNNTTC 1 cut(s) 450
PfeI GAWTC 4 cut(s) 143, 287, 698, 1061
PflMI CCANNNNNTGG 1 cut(s) 806
PkrI GCNGC 3 cut(s) 340, 532, 1005
PleI GAGTC 1 cut(s) 169
PpsI GAGTC 1 cut(s) 169
Psp6I CCWGG 2 cut(s) 240, 805
PspFI CCCAGC 1 cut(s) 649
PspGI CCWGG 2 cut(s) 240, 805
PspN4I GGNNCC 4 cut(s) 467, 597, 663, 795
PspPI GGNCC 6 cut(s) 465, 596, 672, 775, 932, 977
PstI CTGCAG 1 cut(s) 628
PstNI CAGNNNCTG 2 cut(s) 164, 806
PsuI RGATCY 1 cut(s) 661
PvuII CAGCTG 1 cut(s) 121
RsaI GTAC 3 cut(s) 863, 998, 1022
RsaNI GTAC 3 cut(s) 862, 997, 1021
RseI CAYNNNNRTG 1 cut(s) 842
SatI GCNGC 3 cut(s) 339, 531, 1004
Sau3AI GATC 4 cut(s) 178, 661, 667, 819
Sau96I GGNCC 6 cut(s) 465, 596, 672, 775, 932, 977
SchI GAGTC 1 cut(s) 170
ScrFI CCNGG 3 cut(s) 242, 807, 881
SduI GDGCHC 1 cut(s) 1081
SfaNI GCATC 3 cut(s) 13, 607, 629
SfcI CTRYAG 1 cut(s) 624
SfuI TTCGAA 2 cut(s) 141, 298
SinI GGWCC 3 cut(s) 596, 672, 932
SmiMI CAYNNNNRTG 1 cut(s) 842
SphI GCATGC 1 cut(s) 222
Sse9I AATT 5 cut(s) 89, 608, 635, 968, 1087
SsiI CCGC 6 cut(s) 530, 593, 907, 992, 1001, 1004
StyD4I CCNGG 3 cut(s) 240, 805, 879
StyI CCWWGG 3 cut(s) 253, 573, 1024
TaaI ACNGT 4 cut(s) 295, 371, 430, 1074
TaiI ACGT 1 cut(s) 116
TaqI TCGA 4 cut(s) 141, 177, 298, 343
TasI AATT 5 cut(s) 89, 608, 635, 968, 1087
TauI GCSGC 2 cut(s) 533, 1006
TfiI GAWTC 4 cut(s) 143, 287, 698, 1061
TscAI CASTG 3 cut(s) 13, 745, 891
TseFI GTSAC 2 cut(s) 114, 830
TseI GCWGC 1 cut(s) 338
Tsp45I GTSAC 2 cut(s) 114, 830
TspDTI ATGAA 1 cut(s) 826
TspGWI ACGGA 1 cut(s) 870
TspRI CASTG 3 cut(s) 13, 745, 891
Van91I CCANNNNNTGG 1 cut(s) 806
VpaK11BI GGWCC 3 cut(s) 596, 672, 932
XapI RAATTY 1 cut(s) 608
XceI RCATGY 4 cut(s) 218, 222, 238, 847
XmnI GAANNNNTTC 1 cut(s) 450
ZraI GACGTC 1 cut(s) 114
Zsp2I ATGCAT 4 cut(s) 28, 109, 220, 622
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.