pycom07g04260

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Reverse (-)
3681345 .. 3682675
1331 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g04260.2

Sequence Viewer

Length: 1173 bp
ATGTCGAGTGGAAAACTCTCAGATGCATTCAAATCCCACCCTATCTTTCTTCACAAGCAACACCCACACGACTTCGGCTCATTACAGGAATTGCCGGAGTCGTATGCATGGACGTCACAGCTTAACGAATATCCGTCTTTCGAATCATTATCTTGCTCAGAGTCTGTGCCGGTAATCGATCTCGCCGACCCAAATGTCTTTGAACTCCTAGGACATGCATGCAAGACTTGGGGCATGTTCCAAGCCACAAACCATGGCGTCCCCCAAAAACTTGTTGACGACATGGAATATACAGTTCGAAGCCTTTTCTCTCTGCCACCCCAACAAAAGCTCAAAGCAGCTCGATTGCCCGATGGCATTTCCGGTTACGGTTTCCATCGCATATCTGCCTTTTGTGAAAAGCTAATGTGGTCTGAGAGCTTCACTACCGTTGGCTCCCCACTTCAACATTTTTGCCAACTTTGGCCCCAAGATTACACCAAGTTCTGGTACGTACGCATGCATGCACGTATTACTCCAACCACTTATAATTATGTACGATATTTAGACATACAAAACTGGCATTCAAGTTGTGTTACTGAAGAATATGAGAAAGAGATGAAAAGGCTTGCAGCTAGATTGATGTGGCTAATGCTTGGCTCATTAGGCATATCCAAGGAAGACATCAAATGGGCGGGTCCAAGAGGTGAATTTGAAGATGCATCTGCAGCCTTACAATTGAACTCATACCCCGCTTGTCCGGATCCGGATCGGACCATGGGTCTTGCCCAACATACTGATTCAAACCTCCTGTCAATCGTCCACCAAAGCGCTAACGCCAGTGGCTTGCAAGTTTTCCAAGAAGGGAAGGATGAGGGCCGGGGGTGGCTTATGGTTCCACCGGTCCCGGGGGCTTTTGTGATCAATGTGGGCGACTTAATTCACATATTATCAAACGGATTGTACCAGAACCCCCTTCACCGGGCAGTGGTGAACCGGAGCCAGCACCGTGTATCAGTTGCCTACTTATATGGTCCTCCGGAGAATGCTCAGCTCTTTCCCCTCTCGAAATTACTCGGCCCGAGTTGCCCTCCGCTGTACCCGCCCGTCACTTGGAATGAGTACCTTGGAACCAAGGCAAAGCTTAACAACAAGGCACTTCAATCACTCCGACTGAATGCTCCTCTGAATTAG

Protein Analysis

391

Amino Acids

43.97

Weight (kDa)

6.56

Isoelectric Point (pI)

46.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 528
AasI GACNNNNNNGTC 1 cut(s) 194
AatII GACGTC 1 cut(s) 116
AccB7I CCANNNNNTGG 1 cut(s) 486
AccIII TCCGGA 3 cut(s) 739, 745, 1018
AciI CCGC 4 cut(s) 674, 732, 1073, 1082
AclWI GGATC 3 cut(s) 737, 750, 756
AcsI RAATTY 1 cut(s) 689
AcuI CTGAAG 1 cut(s) 600
AcyI GRCGYC 2 cut(s) 113, 258
AfaI GTAC 6 cut(s) 491, 495, 537, 944, 1079, 1103
AfeI AGCGCT 1 cut(s) 811
AfiI CCNNNNNNNGG 6 cut(s) 486, 887, 960, 961, 967, 1092
AgeI ACCGGT 1 cut(s) 880
AgsI TTSAA 8 cut(s) 31, 203, 446, 567, 695, 721, 783, 1142
AhdI GACNNNNNGTC 1 cut(s) 759
AluBI AGCT 8 cut(s) 121, 331, 341, 403, 420, 614, 1033, 1123
AluI AGCT 8 cut(s) 121, 331, 341, 403, 420, 614, 1033, 1123
AlwI GGATC 3 cut(s) 737, 750, 756
AlwNI CAGNNNCTG 1 cut(s) 164
Ama87I CYCGRG 2 cut(s) 886, 1060
Aor13HI TCCGGA 3 cut(s) 739, 745, 1018
Aor51HI AGCGCT 1 cut(s) 811
AoxI GGCC 3 cut(s) 464, 856, 1057
ApeKI GCWGC 3 cut(s) 338, 611, 707
ApoI RAATTY 1 cut(s) 689
ArsI GACNNNNNNTTYG 2 cut(s) 776, 808
AsiGI ACCGGT 1 cut(s) 880
AspA2I CCTAGG 1 cut(s) 208
AspLEI GCGC 1 cut(s) 812
AspS9I GGNCC 7 cut(s) 465, 677, 753, 856, 883, 1013, 1058
AsuC2I CCSGG 4 cut(s) 860, 887, 888, 962
AsuHPI GGTGA 3 cut(s) 698, 950, 982
AsuII TTCGAA 2 cut(s) 141, 298
AvaI CYCGRG 2 cut(s) 886, 1060
AvaII GGWCC 4 cut(s) 677, 753, 883, 1013
AvrII CCTAGG 1 cut(s) 208
BamHI GGATCC 1 cut(s) 742
BbsI GAAGAC 1 cut(s) 666
BbvI GCAGC 3 cut(s) 350, 623, 719
BccI CCATC 2 cut(s) 347, 384
BclI TGATCA 1 cut(s) 900
BcnI CCSGG 4 cut(s) 860, 887, 888, 962
BfaI CTAG 2 cut(s) 209, 615
BfmI CTRYAG 1 cut(s) 705
BfoI RGCGCY 1 cut(s) 813
BisI GCNGC 3 cut(s) 339, 612, 708
BlnI CCTAGG 1 cut(s) 208
BlpI GCTNAGC 1 cut(s) 1029
BlsI GCNGC 3 cut(s) 340, 613, 709
Bme1390I CCNGG 4 cut(s) 860, 887, 888, 962
Bme18I GGWCC 4 cut(s) 677, 753, 883, 1013
BmeRI GACNNNNNGTC 1 cut(s) 759
BmeT110I CYCGRG 2 cut(s) 886, 1060
BmgT120I GGNCC 7 cut(s) 465, 677, 753, 856, 883, 1013, 1058
BmiI GGNNCC 8 cut(s) 436, 467, 678, 744, 876, 885, 980, 1111
BmrFI CCNGG 4 cut(s) 860, 887, 888, 962
BmsI GCATC 3 cut(s) 13, 688, 710
BpiI GAAGAC 1 cut(s) 666
BplI GAGNNNNNCTC 2 cut(s) 1054, 1086
Bpu1102I GCTNAGC 1 cut(s) 1029
Bpu14I TTCGAA 2 cut(s) 141, 298
BpuMI CCSGG 4 cut(s) 860, 887, 888, 962
Bsa29I ATCGAT 1 cut(s) 177
BsaAI YACGTR 2 cut(s) 493, 509
BsaBI GATNNNNATC 1 cut(s) 747
BsaHI GRCGYC 2 cut(s) 113, 258
BsaJI CCNNGG 9 cut(s) 208, 253, 654, 756, 859, 886, 887, 1105, 1113
BsaWI WCCGGW 6 cut(s) 362, 739, 745, 880, 975, 1018
Bsc4I CCNNNNNNNGG 6 cut(s) 486, 887, 960, 961, 967, 1092
Bse118I RCCGGY 2 cut(s) 169, 880
Bse1I ACTGG 2 cut(s) 563, 819
Bse8I GATNNNNATC 1 cut(s) 747
BseAI TCCGGA 3 cut(s) 739, 745, 1018
BseCI ATCGAT 1 cut(s) 177
BseDI CCNNGG 9 cut(s) 208, 253, 654, 756, 859, 886, 887, 1105, 1113
BseGI GGATG 1 cut(s) 856
BseJI GATNNNNATC 1 cut(s) 747
BseLI CCNNNNNNNGG 6 cut(s) 486, 887, 960, 961, 967, 1092
BseMII CTCAG 4 cut(s) 33, 171, 405, 1043
BseNI ACTGG 2 cut(s) 563, 819
BseRI GAGGAG 1 cut(s) 1152
BseXI GCAGC 3 cut(s) 350, 623, 719
BshFI GGCC 3 cut(s) 466, 858, 1059
BshTI ACCGGT 1 cut(s) 880
BshVI ATCGAT 1 cut(s) 177
BsiHKCI CYCGRG 2 cut(s) 886, 1060
BsiWI CGTACG 1 cut(s) 493
BslFI GGGAC 2 cut(s) 245, 869
BslI CCNNNNNNNGG 6 cut(s) 486, 887, 960, 961, 967, 1092
BsmFI GGGAC 2 cut(s) 245, 869
BsmI GAATGC 4 cut(s) 26, 562, 1030, 1162
BsnI GGCC 3 cut(s) 466, 858, 1059
BsoBI CYCGRG 2 cut(s) 886, 1060
Bsp119I TTCGAA 2 cut(s) 141, 298
Bsp13I TCCGGA 3 cut(s) 739, 745, 1018
Bsp143I GATC 4 cut(s) 178, 742, 748, 900
Bsp1720I GCTNAGC 1 cut(s) 1029
Bsp19I CCATGG 2 cut(s) 253, 756
BspACI CCGC 4 cut(s) 674, 732, 1073, 1082
BspANI GGCC 3 cut(s) 466, 858, 1059
BspCNI CTCAG 4 cut(s) 32, 170, 406, 1042
BspDI ATCGAT 1 cut(s) 177
BspEI TCCGGA 3 cut(s) 739, 745, 1018
BspLI GGNNCC 8 cut(s) 436, 467, 678, 744, 876, 885, 980, 1111
BspMAI CTGCAG 1 cut(s) 709
BspPI GGATC 3 cut(s) 737, 750, 756
BspT104I TTCGAA 2 cut(s) 141, 298
BsrFI RCCGGY 2 cut(s) 169, 880
BsrI ACTGG 2 cut(s) 563, 819
BssAI RCCGGY 2 cut(s) 169, 880
BssECI CCNNGG 9 cut(s) 208, 253, 654, 756, 859, 886, 887, 1105, 1113
BssMI GATC 4 cut(s) 178, 742, 748, 900
BssNI GRCGYC 2 cut(s) 113, 258
BssT1I CCWWGG 6 cut(s) 208, 253, 654, 756, 1105, 1113
Bst4CI ACNGT 4 cut(s) 295, 371, 430, 989
BstACI GRCGYC 2 cut(s) 113, 258
BstBAI YACGTR 2 cut(s) 493, 509
BstBI TTCGAA 2 cut(s) 141, 298
BstC8I GCNNGC 6 cut(s) 220, 500, 504, 609, 827, 983
BstDEI CTNAG 4 cut(s) 19, 157, 414, 1029
BstDSI CCRYGG 2 cut(s) 253, 756
BstF5I GGATG 1 cut(s) 856
BstH2I RGCGCY 1 cut(s) 813
BstHHI GCGC 1 cut(s) 812
BstKTI GATC 4 cut(s) 181, 745, 751, 903
BstMBI GATC 4 cut(s) 178, 742, 748, 900
BstMWI GCNNNNNNNGC 4 cut(s) 645, 707, 1065, 1081
BstNSI RCATGY 5 cut(s) 218, 222, 238, 502, 506
BstSCI CCNGG 4 cut(s) 858, 885, 886, 960
BstSFI CTRYAG 1 cut(s) 705
BstSNI TACGTA 1 cut(s) 493
BstV1I GCAGC 3 cut(s) 350, 623, 719
BstV2I GAAGAC 1 cut(s) 666
BstX2I RGATCY 1 cut(s) 742
BstYI RGATCY 1 cut(s) 742
Bsu15I ATCGAT 1 cut(s) 177
BsuRI GGCC 3 cut(s) 466, 858, 1059
BsuTUI ATCGAT 1 cut(s) 177
BtgI CCRYGG 2 cut(s) 253, 756
BtgZI GCGATG 1 cut(s) 362
BtsCI GGATG 1 cut(s) 856
BtsI GCAGTG 1 cut(s) 972
BtsIMutI CAGTG 2 cut(s) 826, 972
Cac8I GCNNGC 6 cut(s) 220, 500, 504, 609, 827, 983
CaiI CAGNNNCTG 1 cut(s) 164
CfoI GCGC 1 cut(s) 812
Cfr10I RCCGGY 2 cut(s) 169, 880
Cfr13I GGNCC 7 cut(s) 465, 677, 753, 856, 883, 1013, 1058
Cfr9I CCCGGG 1 cut(s) 886
ClaI ATCGAT 1 cut(s) 177
CseI GACGC 1 cut(s) 247
Csp6I GTAC 6 cut(s) 490, 494, 536, 943, 1078, 1102
CspAI ACCGGT 1 cut(s) 880
CviAII CATG 9 cut(s) 108, 215, 219, 235, 254, 283, 499, 503, 757
CviQI GTAC 6 cut(s) 490, 494, 536, 943, 1078, 1102
DdeI CTNAG 4 cut(s) 19, 157, 414, 1029
DpnI GATC 4 cut(s) 180, 744, 750, 902
DpnII GATC 4 cut(s) 178, 742, 748, 900
DrdI GACNNNNNNGTC 1 cut(s) 194
DriI GACNNNNNGTC 1 cut(s) 759
DseDI GACNNNNNNGTC 1 cut(s) 194
Eam1105I GACNNNNNGTC 1 cut(s) 759
Eco105I TACGTA 1 cut(s) 493
Eco130I CCWWGG 6 cut(s) 208, 253, 654, 756, 1105, 1113
Eco47I GGWCC 4 cut(s) 677, 753, 883, 1013
Eco47III AGCGCT 1 cut(s) 811
Eco57I CTGAAG 1 cut(s) 600
Eco88I CYCGRG 2 cut(s) 886, 1060
EcoT14I CCWWGG 6 cut(s) 208, 253, 654, 756, 1105, 1113
EcoT22I ATGCAT 5 cut(s) 28, 109, 220, 504, 703
ErhI CCWWGG 6 cut(s) 208, 253, 654, 756, 1105, 1113
FaeI CATG 9 cut(s) 111, 218, 222, 238, 257, 286, 502, 506, 760
FaqI GGGAC 2 cut(s) 245, 869
FatI CATG 9 cut(s) 107, 214, 218, 234, 253, 282, 498, 502, 756
FauI CCCGC 3 cut(s) 667, 739, 1089
FbaI TGATCA 1 cut(s) 900
Fnu4HI GCNGC 3 cut(s) 339, 612, 708
FokI GGATG 1 cut(s) 863
Fsp4HI GCNGC 3 cut(s) 339, 612, 708
FspBI CTAG 2 cut(s) 209, 615
GlaI GCGC 1 cut(s) 811
GluI GCNGC 3 cut(s) 339, 612, 708
HaeII RGCGCY 1 cut(s) 813
HaeIII GGCC 3 cut(s) 466, 858, 1059
HgaI GACGC 1 cut(s) 247
HhaI GCGC 1 cut(s) 812
Hin1I GRCGYC 2 cut(s) 113, 258
Hin1II CATG 9 cut(s) 111, 218, 222, 238, 257, 286, 502, 506, 760
Hin6I GCGC 1 cut(s) 810
HinP1I GCGC 1 cut(s) 810
HincII GTYRAC 1 cut(s) 277
HindII GTYRAC 1 cut(s) 277
HindIII AAGCTT 1 cut(s) 1121
HinfI GANTC 4 cut(s) 98, 143, 161, 779
HphI GGTGA 3 cut(s) 698, 950, 982
Hpy166II GTNNAC 3 cut(s) 277, 802, 973
Hpy188I TCNGA 6 cut(s) 22, 160, 415, 753, 1151, 1167
Hpy188III TCNNGA 4 cut(s) 740, 746, 1019, 1045
Hpy8I GTNNAC 3 cut(s) 277, 802, 973
HpyAV CCTTC 3 cut(s) 836, 841, 965
HpyCH4III ACNGT 4 cut(s) 295, 371, 430, 989
HpyCH4IV ACGT 3 cut(s) 113, 492, 508
HpyF10VI GCNNNNNNNGC 4 cut(s) 645, 707, 1065, 1081
HpyF3I CTNAG 4 cut(s) 19, 157, 414, 1029
HpySE526I ACGT 3 cut(s) 113, 492, 508
Hsp92I GRCGYC 2 cut(s) 113, 258
Hsp92II CATG 9 cut(s) 111, 218, 222, 238, 257, 286, 502, 506, 760
HspAI GCGC 1 cut(s) 810
Kpn2I TCCGGA 3 cut(s) 739, 745, 1018
Ksp22I TGATCA 1 cut(s) 900
Kzo9I GATC 4 cut(s) 178, 742, 748, 900
LmnI GCTCC 3 cut(s) 440, 978, 1165
Lsp1109I GCAGC 3 cut(s) 350, 623, 719
LweI GCATC 3 cut(s) 13, 688, 710
MaeI CTAG 2 cut(s) 209, 615
MaeII ACGT 3 cut(s) 113, 492, 508
MaeIII GTNAC 4 cut(s) 114, 365, 574, 1087
MalI GATC 4 cut(s) 180, 744, 750, 902
MboI GATC 4 cut(s) 178, 742, 748, 900
MboII GAAGA 4 cut(s) 41, 593, 671, 707
MfeI CAATTG 1 cut(s) 716
MflI RGATCY 1 cut(s) 742
MluCI AATT 7 cut(s) 89, 529, 689, 716, 918, 1049, 1168
MlyI GAGTC 2 cut(s) 107, 170
MmeI TCCRAC 1 cut(s) 542
MnlI CCTC 7 cut(s) 677, 797, 847, 1026, 1052, 1080, 1173
Mph1103I ATGCAT 5 cut(s) 28, 109, 220, 504, 703
MroI TCCGGA 3 cut(s) 739, 745, 1018
MseI TTAA 3 cut(s) 123, 917, 1125
MspA1I CMGCKG 1 cut(s) 1075
MspR9I CCNGG 4 cut(s) 860, 887, 888, 962
MunI CAATTG 1 cut(s) 716
Mva1269I GAATGC 4 cut(s) 26, 562, 1030, 1162
MwoI GCNNNNNNNGC 4 cut(s) 645, 707, 1065, 1081
NciI CCSGG 4 cut(s) 860, 887, 888, 962
NcoI CCATGG 2 cut(s) 253, 756
NdeII GATC 4 cut(s) 178, 742, 748, 900
NlaIII CATG 9 cut(s) 111, 218, 222, 238, 257, 286, 502, 506, 760
NlaIV GGNNCC 8 cut(s) 436, 467, 678, 744, 876, 885, 980, 1111
NmeAIII GCCGAG 1 cut(s) 1035
NmuCI GTSAC 2 cut(s) 114, 1087
NsiI ATGCAT 5 cut(s) 28, 109, 220, 504, 703
NspI RCATGY 5 cut(s) 218, 222, 238, 502, 506
NspV TTCGAA 2 cut(s) 141, 298
PaeI GCATGC 3 cut(s) 222, 502, 506
PcsI WCGNNNNNNNCGW 1 cut(s) 183
PctI GAATGC 4 cut(s) 26, 562, 1030, 1162
PfeI GAWTC 2 cut(s) 143, 779
Pfl23II CGTACG 1 cut(s) 493
PflMI CCANNNNNTGG 1 cut(s) 486
PinAI ACCGGT 1 cut(s) 880
PkrI GCNGC 3 cut(s) 340, 613, 709
PleI GAGTC 2 cut(s) 106, 169
PpsI GAGTC 2 cut(s) 106, 169
Ppu21I YACGTR 2 cut(s) 493, 509
PsiI TTATAA 1 cut(s) 528
PspLI CGTACG 1 cut(s) 493
PspN4I GGNNCC 8 cut(s) 436, 467, 678, 744, 876, 885, 980, 1111
PspPI GGNCC 7 cut(s) 465, 677, 753, 856, 883, 1013, 1058
PstI CTGCAG 1 cut(s) 709
PstNI CAGNNNCTG 1 cut(s) 164
PsuI RGATCY 1 cut(s) 742
RsaI GTAC 6 cut(s) 491, 495, 537, 944, 1079, 1103
RsaNI GTAC 6 cut(s) 490, 494, 536, 943, 1078, 1102
SaqAI TTAA 3 cut(s) 123, 917, 1125
SatI GCNGC 3 cut(s) 339, 612, 708
Sau3AI GATC 4 cut(s) 178, 742, 748, 900
Sau96I GGNCC 7 cut(s) 465, 677, 753, 856, 883, 1013, 1058
SchI GAGTC 2 cut(s) 107, 170
ScrFI CCNGG 4 cut(s) 860, 887, 888, 962
SfaNI GCATC 3 cut(s) 13, 688, 710
SfcI CTRYAG 1 cut(s) 705
SfuI TTCGAA 2 cut(s) 141, 298
SinI GGWCC 4 cut(s) 677, 753, 883, 1013
SmaI CCCGGG 1 cut(s) 888
SnaBI TACGTA 1 cut(s) 493
SphI GCATGC 3 cut(s) 222, 502, 506
Sse9I AATT 7 cut(s) 89, 529, 689, 716, 918, 1049, 1168
SsiI CCGC 4 cut(s) 674, 732, 1073, 1082
SspMI CTAG 2 cut(s) 209, 615
StyD4I CCNGG 4 cut(s) 858, 885, 886, 960
StyI CCWWGG 6 cut(s) 208, 253, 654, 756, 1105, 1113
TaaI ACNGT 4 cut(s) 295, 371, 430, 989
TaiI ACGT 3 cut(s) 116, 495, 511
TaqI TCGA 6 cut(s) 5, 141, 177, 298, 343, 1046
TasI AATT 7 cut(s) 89, 529, 689, 716, 918, 1049, 1168
TfiI GAWTC 2 cut(s) 143, 779
Tru1I TTAA 3 cut(s) 123, 917, 1125
Tru9I TTAA 3 cut(s) 123, 917, 1125
TscAI CASTG 2 cut(s) 826, 972
TseFI GTSAC 2 cut(s) 114, 1087
TseI GCWGC 3 cut(s) 338, 611, 707
Tsp45I GTSAC 2 cut(s) 114, 1087
TspDTI ATGAA 1 cut(s) 614
TspGWI ACGGA 2 cut(s) 123, 951
TspMI CCCGGG 1 cut(s) 886
TspRI CASTG 2 cut(s) 826, 972
Van91I CCANNNNNTGG 1 cut(s) 486
VpaK11BI GGWCC 4 cut(s) 677, 753, 883, 1013
XapI RAATTY 1 cut(s) 689
XceI RCATGY 5 cut(s) 218, 222, 238, 502, 506
XmaI CCCGGG 1 cut(s) 886
XmaJI CCTAGG 1 cut(s) 208
XspI CTAG 2 cut(s) 209, 615
ZraI GACGTC 1 cut(s) 114
Zsp2I ATGCAT 5 cut(s) 28, 109, 220, 504, 703
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.