Prupe.3G075600_v2.0.a1

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
5551077 .. 5553011
1935 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G075600.1

Sequence Viewer

Length: 1119 bp
ATGCCTGCAAGACTCTCTGATGCCTTCAAATCCCACCCTCTCAATCTCCAACTGAAGCACCCAGATTTCAGCTCATTGCAGGAGCTTCCAGACTCCTATGCATGGAGCCAAAACGATGACCAGTACCCTTCTTCTCCGGGCTCATTTGGGGCAGAGCAAGACTCTGTTCCAGTCATTGATCTCTCCGACCCCAATGCCCTTAAGCTCACAGGCCATGCATGTCGAACTTGGGGTGTCTTCCAAGTCACCAACCATGGCATCCCGAGCAAGCTTCTTGACGACATTGAATCTGCTGGCAGAAGCCTTTTCTCTCTGCCGGTTCAGCAGAAGCTCAAGGCCGCTCGATCGCCGGACGGCATTTCCGGCTATGGCTTTGCTCGGATATCTTCGTTTTTTCAGAAGCTCATGTGGTCTGAGGGCTTCACTATTGTTGGCTCCCCACTTGACCATTTTCGTCAACTTTGGCCCCAAGATTACAACAAATTCTGTAATATTATTGAAGAATATGAGAAGGAGATGAAAAAGCTTGCCGGCAGGCTGATGTGGCTAATGCTTGGCTCACTAGGTATATCCAAGGAAGATGTCAAATGGGCTGGGCCAAAAGGTGACTTCAGAGATGCATCTGCTGCCTTACAATTGAATTCGTACCCGGCTTGCCCGGACCCGGATCGGGCCATGGGTTTGGCAGCGCATACGGATTCTACCCTCCTCACAATCCTTTACCAAAACAACACTAGTGGCTTGCAAGTCCTCCGGGAGGGGACCAGGTGGGTCACGGTTCCGCCATTGCCCGGTGCTCTCGTGGTCAACGTCGGCGATCTCATCCATATATTATCTAACGGGTTGTACCCGAGTGTCCTTCACCAGGCAGTGGTGAACCGGAGCAGACACCGTTTATCCATCGCTTACTTATACGGACCCCCAGATAGCGTCCAAATCTCACCCCTTTCAAAATTACTAGGCCCAAGTCAGCCTCCTCTCTACCGGCCAATTACTTGGAATGAGTACCTTGGCACAAAGGCAAAGCATTTCAATAAGGCACTTTCATCTGTCCGCCTTTGTGCTCCTCTAAATGCATTAGTTGATGTAAGTGATCACAACAGCGTAAAAGTCGGGTAG

Protein Analysis

373

Amino Acids

41.05

Weight (kDa)

7.72

Isoelectric Point (pI)

46.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 871
AccBSI CCGCTC 1 cut(s) 341
AciI CCGC 3 cut(s) 339, 782, 1054
AclWI GGATC 1 cut(s) 675
AcoI YGGCCR 1 cut(s) 986
AcsI RAATTY 2 cut(s) 482, 640
AcuI CTGAAG 2 cut(s) 74, 595
AfaI GTAC 4 cut(s) 125, 647, 848, 1007
AfiI CCNNNNNNNGG 7 cut(s) 102, 664, 670, 757, 791, 865, 871
AflII CTTAAG 1 cut(s) 200
AgsI TTSAA 6 cut(s) 28, 287, 500, 640, 951, 1033
AhlI ACTAGT 1 cut(s) 734
AjnI CCWGG 2 cut(s) 764, 864
AluBI AGCT 7 cut(s) 72, 85, 205, 271, 331, 403, 526
AluI AGCT 7 cut(s) 72, 85, 205, 271, 331, 403, 526
Alw21I GWGCWC 2 cut(s) 799, 1066
AlwI GGATC 1 cut(s) 675
Ama87I CYCGRG 2 cut(s) 262, 850
AoxI GGCC 7 cut(s) 211, 336, 464, 596, 672, 961, 986
ApeKI GCWGC 2 cut(s) 626, 686
ApoI RAATTY 2 cut(s) 482, 640
AspLEI GCGC 1 cut(s) 691
AspS9I GGNCC 7 cut(s) 465, 596, 661, 672, 762, 917, 962
AsuC2I CCSGG 6 cut(s) 138, 650, 659, 665, 755, 792
AsuHPI GGTGA 5 cut(s) 238, 617, 854, 886, 933
AvaI CYCGRG 2 cut(s) 262, 850
AvaII GGWCC 3 cut(s) 661, 762, 917
BanII GRGCYC 1 cut(s) 143
BauI CACGAG 1 cut(s) 800
BbsI GAAGAC 1 cut(s) 229
Bbv12I GWGCWC 2 cut(s) 799, 1066
BbvI GCAGC 2 cut(s) 613, 698
BccI CCATC 1 cut(s) 908
BceAI ACGGC 1 cut(s) 370
BcgI CGANNNNNNTGC 2 cut(s) 176, 210
BciT130I CCWGG 2 cut(s) 766, 866
BclI TGATCA 1 cut(s) 1093
BcnI CCSGG 6 cut(s) 138, 650, 659, 665, 755, 792
BcuI ACTAGT 1 cut(s) 734
BfaI CTAG 3 cut(s) 563, 735, 959
BfrI CTTAAG 1 cut(s) 200
BisI GCNGC 3 cut(s) 339, 627, 687
BlsI GCNGC 3 cut(s) 340, 628, 688
Bme1390I CCNGG 8 cut(s) 138, 650, 659, 665, 755, 766, 792, 866
Bme18I GGWCC 3 cut(s) 661, 762, 917
BmeT110I CYCGRG 2 cut(s) 262, 850
BmgT120I GGNCC 7 cut(s) 465, 596, 661, 672, 762, 917, 962
BmiI GGNNCC 7 cut(s) 107, 436, 467, 663, 763, 780, 919
BmrFI CCNGG 8 cut(s) 138, 650, 659, 665, 755, 766, 792, 866
BmsI GCATC 4 cut(s) 10, 267, 607, 629
BpiI GAAGAC 1 cut(s) 229
BplI GAGNNNNNCTC 2 cut(s) 146, 178
BpuEI CTTGAG 1 cut(s) 317
BpuMI CCSGG 6 cut(s) 138, 650, 659, 665, 755, 792
BsaJI CCNNGG 4 cut(s) 253, 573, 675, 1009
BsaWI WCCGGW 1 cut(s) 879
Bsc4I CCNNNNNNNGG 7 cut(s) 102, 664, 670, 757, 791, 865, 871
Bse118I RCCGGY 3 cut(s) 316, 530, 984
Bse1I ACTGG 2 cut(s) 121, 170
Bse3DI GCAATG 2 cut(s) 74, 785
BseBI CCWGG 2 cut(s) 766, 866
BseDI CCNNGG 4 cut(s) 253, 573, 675, 1009
BseGI GGATG 2 cut(s) 258, 822
BseLI CCNNNNNNNGG 7 cut(s) 102, 664, 670, 757, 791, 865, 871
BseMI GCAATG 2 cut(s) 74, 785
BseMII CTCAG 1 cut(s) 405
BseNI ACTGG 2 cut(s) 121, 170
BseRI GAGGAG 3 cut(s) 698, 966, 1056
BseXI GCAGC 2 cut(s) 613, 698
BseYI CCCAGC 1 cut(s) 593
Bsh1285I CGRYCG 1 cut(s) 347
BshFI GGCC 7 cut(s) 213, 338, 466, 598, 674, 963, 988
BsiEI CGRYCG 1 cut(s) 347
BsiHKAI GWGCWC 2 cut(s) 799, 1066
BsiHKCI CYCGRG 2 cut(s) 262, 850
BslFI GGGAC 1 cut(s) 775
BslI CCNNNNNNNGG 7 cut(s) 102, 664, 670, 757, 791, 865, 871
BsmFI GGGAC 1 cut(s) 775
BsnI GGCC 7 cut(s) 213, 338, 466, 598, 674, 963, 988
BsoBI CYCGRG 2 cut(s) 262, 850
Bsp1286I GDGCHC 3 cut(s) 143, 799, 1066
Bsp143I GATC 5 cut(s) 178, 344, 667, 817, 1093
Bsp19I CCATGG 2 cut(s) 253, 675
BspACI CCGC 3 cut(s) 339, 782, 1054
BspANI GGCC 7 cut(s) 213, 338, 466, 598, 674, 963, 988
BspCNI CTCAG 1 cut(s) 406
BspLI GGNNCC 7 cut(s) 107, 436, 467, 663, 763, 780, 919
BspPI GGATC 1 cut(s) 675
BspTI CTTAAG 1 cut(s) 200
BsrBI CCGCTC 1 cut(s) 341
BsrDI GCAATG 2 cut(s) 74, 785
BsrFI RCCGGY 3 cut(s) 316, 530, 984
BsrI ACTGG 2 cut(s) 121, 170
BssAI RCCGGY 3 cut(s) 316, 530, 984
BssECI CCNNGG 4 cut(s) 253, 573, 675, 1009
BssMI GATC 5 cut(s) 178, 344, 667, 817, 1093
BssSI CACGAG 1 cut(s) 800
BssT1I CCWWGG 4 cut(s) 253, 573, 675, 1009
Bst2BI CACGAG 1 cut(s) 800
Bst2UI CCWGG 2 cut(s) 766, 866
Bst4CI ACNGT 2 cut(s) 778, 893
BstAFI CTTAAG 1 cut(s) 200
BstAPI GCANNNNNTGC 1 cut(s) 626
BstC8I GCNNGC 8 cut(s) 6, 269, 295, 528, 532, 536, 655, 743
BstDEI CTNAG 1 cut(s) 414
BstDSI CCRYGG 2 cut(s) 253, 675
BstENI CCTNNNNNAGG 2 cut(s) 755, 863
BstF5I GGATG 2 cut(s) 258, 822
BstHHI GCGC 1 cut(s) 691
BstKTI GATC 5 cut(s) 181, 347, 670, 820, 1096
BstMBI GATC 5 cut(s) 178, 344, 667, 817, 1093
BstMCI CGRYCG 1 cut(s) 347
BstMWI GCNNNNNNNGC 5 cut(s) 264, 322, 363, 544, 626
BstNI CCWGG 2 cut(s) 766, 866
BstNSI RCATGY 1 cut(s) 222
BstSCI CCNGG 8 cut(s) 136, 648, 657, 663, 753, 764, 790, 864
BstV1I GCAGC 2 cut(s) 613, 698
BstV2I GAAGAC 1 cut(s) 229
BstXI CCANNNNNNTGG 2 cut(s) 682, 996
BsuRI GGCC 7 cut(s) 213, 338, 466, 598, 674, 963, 988
BtgI CCRYGG 2 cut(s) 253, 675
BtgZI GCGATG 1 cut(s) 886
BtsCI GGATG 2 cut(s) 258, 822
BtsI GCAGTG 1 cut(s) 876
BtsIMutI CAGTG 1 cut(s) 876
Cac8I GCNNGC 8 cut(s) 6, 269, 295, 528, 532, 536, 655, 743
CfoI GCGC 1 cut(s) 691
Cfr10I RCCGGY 3 cut(s) 316, 530, 984
Cfr13I GGNCC 7 cut(s) 465, 596, 661, 672, 762, 917, 962
CseI GACGC 1 cut(s) 919
CsiI ACCWGGT 1 cut(s) 764
Csp6I GTAC 4 cut(s) 124, 646, 847, 1006
CspCI CAANNNNNGTGG 2 cut(s) 718, 753
CviAII CATG 6 cut(s) 102, 215, 219, 254, 406, 676
CviQI GTAC 4 cut(s) 124, 646, 847, 1006
DdeI CTNAG 1 cut(s) 414
DpnI GATC 5 cut(s) 180, 346, 669, 819, 1095
DpnII GATC 5 cut(s) 178, 344, 667, 817, 1093
EaeI YGGCCR 1 cut(s) 986
EciI GGCGGA 2 cut(s) 771, 1043
Eco130I CCWWGG 4 cut(s) 253, 573, 675, 1009
Eco24I GRGCYC 1 cut(s) 143
Eco32I GATATC 1 cut(s) 384
Eco47I GGWCC 3 cut(s) 661, 762, 917
Eco57I CTGAAG 2 cut(s) 74, 595
Eco88I CYCGRG 2 cut(s) 262, 850
EcoNI CCTNNNNNAGG 2 cut(s) 755, 863
EcoRI GAATTC 1 cut(s) 640
EcoRII CCWGG 2 cut(s) 764, 864
EcoRV GATATC 1 cut(s) 384
EcoT14I CCWWGG 4 cut(s) 253, 573, 675, 1009
EcoT22I ATGCAT 4 cut(s) 103, 220, 622, 1078
EcoT38I GRGCYC 1 cut(s) 143
ErhI CCWWGG 4 cut(s) 253, 573, 675, 1009
FaeI CATG 6 cut(s) 105, 218, 222, 257, 409, 679
FaqI GGGAC 1 cut(s) 775
FatI CATG 6 cut(s) 101, 214, 218, 253, 405, 675
FbaI TGATCA 1 cut(s) 1093
Fnu4HI GCNGC 3 cut(s) 339, 627, 687
FokI GGATG 2 cut(s) 245, 809
FriOI GRGCYC 1 cut(s) 143
Fsp4HI GCNGC 3 cut(s) 339, 627, 687
FspBI CTAG 3 cut(s) 563, 735, 959
GlaI GCGC 1 cut(s) 690
GluI GCNGC 3 cut(s) 339, 627, 687
GsaI CCCAGC 1 cut(s) 597
HaeIII GGCC 7 cut(s) 213, 338, 466, 598, 674, 963, 988
HgaI GACGC 1 cut(s) 919
HhaI GCGC 1 cut(s) 691
Hin1II CATG 6 cut(s) 105, 218, 222, 257, 409, 679
Hin6I GCGC 1 cut(s) 689
HinP1I GCGC 1 cut(s) 689
HincII GTYRAC 2 cut(s) 458, 808
HindII GTYRAC 2 cut(s) 458, 808
HindIII AAGCTT 2 cut(s) 269, 524
HinfI GANTC 5 cut(s) 12, 92, 161, 287, 698
HphI GGTGA 5 cut(s) 238, 617, 854, 886, 933
Hpy166II GTNNAC 3 cut(s) 458, 808, 877
Hpy188I TCNGA 6 cut(s) 19, 187, 381, 399, 415, 614
Hpy188III TCNNGA 3 cut(s) 89, 262, 275
Hpy8I GTNNAC 3 cut(s) 458, 808, 877
Hpy99I CGWCG 1 cut(s) 815
HpyAV CCTTC 4 cut(s) 34, 138, 505, 869
HpyCH4III ACNGT 2 cut(s) 778, 893
HpyCH4IV ACGT 1 cut(s) 810
HpyCH4V TGCA 7 cut(s) 8, 79, 101, 218, 620, 745, 1076
HpyF10VI GCNNNNNNNGC 5 cut(s) 264, 322, 363, 544, 626
HpyF3I CTNAG 1 cut(s) 414
HpySE526I ACGT 1 cut(s) 810
Hsp92II CATG 6 cut(s) 105, 218, 222, 257, 409, 679
HspAI GCGC 1 cut(s) 689
KroI GCCGGC 1 cut(s) 530
KroNI GCCGGC 1 cut(s) 532
Ksp22I TGATCA 1 cut(s) 1093
Kzo9I GATC 5 cut(s) 178, 344, 667, 817, 1093
LmnI GCTCC 5 cut(s) 82, 105, 440, 882, 1069
Lsp1109I GCAGC 2 cut(s) 613, 698
LweI GCATC 4 cut(s) 10, 267, 607, 629
MabI ACCWGGT 1 cut(s) 764
MaeI CTAG 3 cut(s) 563, 735, 959
MaeII ACGT 1 cut(s) 810
MaeIII GTNAC 3 cut(s) 244, 605, 772
MalI GATC 5 cut(s) 180, 346, 669, 819, 1095
MbiI CCGCTC 1 cut(s) 341
MboI GATC 5 cut(s) 178, 344, 667, 817, 1093
MboII GAAGA 5 cut(s) 123, 229, 378, 512, 590
MfeI CAATTG 1 cut(s) 635
MhlI GDGCHC 3 cut(s) 143, 799, 1066
MluCI AATT 5 cut(s) 482, 635, 640, 953, 990
MlyI GAGTC 3 cut(s) 6, 86, 155
MmeI TCCRAC 2 cut(s) 73, 210
MnlI CCTC 9 cut(s) 48, 409, 716, 719, 751, 761, 984, 987, 1077
Mph1103I ATGCAT 4 cut(s) 103, 220, 622, 1078
MroNI GCCGGC 1 cut(s) 530
MseI TTAA 1 cut(s) 201
MspCI CTTAAG 1 cut(s) 200
MspR9I CCNGG 8 cut(s) 138, 650, 659, 665, 755, 766, 792, 866
MunI CAATTG 1 cut(s) 635
MvaI CCWGG 2 cut(s) 766, 866
MwoI GCNNNNNNNGC 5 cut(s) 264, 322, 363, 544, 626
NaeI GCCGGC 1 cut(s) 532
NciI CCSGG 6 cut(s) 138, 650, 659, 665, 755, 792
NcoI CCATGG 2 cut(s) 253, 675
NdeII GATC 5 cut(s) 178, 344, 667, 817, 1093
NgoMIV GCCGGC 1 cut(s) 530
NlaIII CATG 6 cut(s) 105, 218, 222, 257, 409, 679
NlaIV GGNNCC 7 cut(s) 107, 436, 467, 663, 763, 780, 919
NmuCI GTSAC 3 cut(s) 244, 605, 772
NsiI ATGCAT 4 cut(s) 103, 220, 622, 1078
NspI RCATGY 1 cut(s) 222
PcsI WCGNNNNNNNCGW 1 cut(s) 807
PdiI GCCGGC 1 cut(s) 532
PfeI GAWTC 2 cut(s) 287, 698
PflMI CCANNNNNTGG 1 cut(s) 871
PfoI TCCNGGA 1 cut(s) 753
PkrI GCNGC 3 cut(s) 340, 628, 688
Ple19I CGATCG 1 cut(s) 347
PleI GAGTC 3 cut(s) 6, 86, 155
PpsI GAGTC 3 cut(s) 6, 86, 155
Psp6I CCWGG 2 cut(s) 764, 864
PspFI CCCAGC 1 cut(s) 593
PspGI CCWGG 2 cut(s) 764, 864
PspN4I GGNNCC 7 cut(s) 107, 436, 467, 663, 763, 780, 919
PspPI GGNCC 7 cut(s) 465, 596, 661, 672, 762, 917, 962
PvuI CGATCG 1 cut(s) 347
RsaI GTAC 4 cut(s) 125, 647, 848, 1007
RsaNI GTAC 4 cut(s) 124, 646, 847, 1006
SaqAI TTAA 1 cut(s) 201
SatI GCNGC 3 cut(s) 339, 627, 687
Sau3AI GATC 5 cut(s) 178, 344, 667, 817, 1093
Sau96I GGNCC 7 cut(s) 465, 596, 661, 672, 762, 917, 962
SchI GAGTC 3 cut(s) 6, 86, 155
ScrFI CCNGG 8 cut(s) 138, 650, 659, 665, 755, 766, 792, 866
SduI GDGCHC 3 cut(s) 143, 799, 1066
SexAI ACCWGGT 1 cut(s) 764
SfaNI GCATC 4 cut(s) 10, 267, 607, 629
SinI GGWCC 3 cut(s) 661, 762, 917
SmlI CTYRAG 2 cut(s) 200, 332
SmoI CTYRAG 2 cut(s) 200, 332
SpeI ACTAGT 1 cut(s) 734
Sse9I AATT 5 cut(s) 482, 635, 640, 953, 990
SsiI CCGC 3 cut(s) 339, 782, 1054
SspI AATATT 1 cut(s) 493
SspMI CTAG 3 cut(s) 563, 735, 959
StyD4I CCNGG 8 cut(s) 136, 648, 657, 663, 753, 764, 790, 864
StyI CCWWGG 4 cut(s) 253, 573, 675, 1009
TaaI ACNGT 2 cut(s) 778, 893
TaiI ACGT 1 cut(s) 813
TaqI TCGA 2 cut(s) 223, 343
TasI AATT 5 cut(s) 482, 635, 640, 953, 990
TauI GCSGC 1 cut(s) 341
TfiI GAWTC 2 cut(s) 287, 698
Tru1I TTAA 1 cut(s) 201
Tru9I TTAA 1 cut(s) 201
TscAI CASTG 1 cut(s) 876
TseFI GTSAC 3 cut(s) 244, 605, 772
TseI GCWGC 2 cut(s) 626, 686
Tsp45I GTSAC 3 cut(s) 244, 605, 772
TspDTI ATGAA 2 cut(s) 533, 1035
TspGWI ACGGA 2 cut(s) 710, 930
TspRI CASTG 1 cut(s) 876
Van91I CCANNNNNTGG 1 cut(s) 871
Vha464I CTTAAG 1 cut(s) 200
VpaK11BI GGWCC 3 cut(s) 661, 762, 917
XagI CCTNNNNNAGG 2 cut(s) 755, 863
XapI RAATTY 2 cut(s) 482, 640
XceI RCATGY 1 cut(s) 222
XspI CTAG 3 cut(s) 563, 735, 959
Zsp2I ATGCAT 4 cut(s) 103, 220, 622, 1078
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.