Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0002967

Physical Location & Seq

Genomic Coordinates Forward (+)

7889552 .. 7890932

Gene Structure 1381 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G061700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1071 bp

ATGGCTCCAACTGCAACAGCCCCTGATGCTCACAACTCCAAAACTTTCGATGTTATTCTGGGCAAGGTACCAGATGACTTCAAGTCATTGCATGAGATACCAGAAGAGTATGCATGGACAAACCTCAATGAACATCCATCTTTAGACTCAGATTCTGTGCCCATCATTGATCTAAATGACCCAAATGCCTCCCAACTCATAAGCCATGCATGCACGACTTGGGGTGTGTTCCAACTCATAAATCATGGCGTCCCCAACAATGTGGTTGAAGACATGGAATCTGTTGCTCAAAGCCTCTTCTCTCTACCAGCCGAACAAAAGCTCAAAGCAGCCCGAGGACCCGGTGGCATTTCTGGTTACGGCCCCCAGCTCATATCTGCCTTTTGGGATAAGAAACTTTGGTCTGAGTGCTTCACTATTCTTGGTTCACCACTTGAACATTATGCCAAACTTTGGCCCCAAGGGTACACCAAAATCTGTTCTATTACCGAAGAATATGATAAAGAATTGGGAAGGCTTTGCTCTAGGCTGATGTGGATAATGCTTGCCTCATTAGGTATATCCAAGGAAGATGTCAAATGGTCTGGCCCCAAAGGTGATAACCAAGAGGCACATGTCCTCCAGTTGAATTCTTACCCTGCTTGTCCTGATCCGGATCGGGCCATGGGTCTTGTTGCCCATACTGATTCAACCCTTGTCACCATTGTCCACCAAAGTAAGATCTGTGGCTTGCAAGTTTTCCAAGAGGGCACCGGTTGGTTTACGGTTCCACCGGTTCCCGGCGCTATGGTAGTCAACGTCGGTGACCTCATGCACATATTATCTAACGGGTCGTATGTGAGTGTCCTCCATCGGGTACTGGTGAACCAAACTCAGCCCCGTCTATCAGTTGTTTATACTTATGGACCACCAGACAATGTCCCAATCTCACCAATACCAAAACTACTAAGCGCAAGCCACCCTGCCCTCTACCCACCCGTCACCAATTGGAGTGAGTACATTGACACCAAGACAAAGCTCAAGGGCAAGGCACTTGCATCACTCCGGCTTTATGAGCCTCGTACAAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0009685 GO:0009686 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009987 GO:0010033 GO:0010114 GO:0010476 GO:0010817 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016491 GO:0016705 GO:0016706 GO:0016707 GO:0019752 GO:0023052 GO:0032870 GO:0033993 GO:0042221 GO:0042445 GO:0042446 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044424 GO:0044464 GO:0046394 GO:0050789 GO:0050794 GO:0050896 GO:0051213 GO:0051716 GO:0055114 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00904 ko01110 map00904 map01110

Pfam Domains

Protein Families

2OG-FeII_Oxy DIOX_N

Protein Analysis

357

Amino Acids

39.17

Weight (kDa)

5.72

Isoelectric Point (pI)

40.08

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002967)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15550 AT1G80340
fragaria_vesca	FvH4_6g30780
malus_domestica	MD02G1263100.v1.1 MD02G1263200.v1.1 MD07G1054800.v1.1 MD09G1217400.v1.1 MD17G1199100.v1.1
prunus_persica	Prupe.2G061700_v2.0.a1 Prupe.3G075600_v2.0.a1
pyrus_communis	pycom07g04260 pycom09g13440 pycom17g20380
rosa_chinensis	RchiOBHm_Chr2g0137231 RchiOBHm_Chr7g0236321
rosa_laevigata	RLG00000001086 RLG00000019636
rosa_multiflora	Rmu_co8273963.1_g000001 Rmu_sc0000894.1_g000034 Rmu_sc0001441.1_g000006 Rmu_sc0009898.1_g000005 Rmu_sc0029248.1_g000002
rosa_roxburghii	Rroxscaffold_2G00107310 Rroxscaffold_3G00225230
rosa_rugosa	Rorug02G0339700 Rorug07G0295900 Rorug07G0296000
rosa_samantha	Rh2AG388500 Rh2BG396100 Rh2CG375900 Rh2DG411200 Rh7AG450800 Rh7BG422300 Rh7CG470400 Rh7CG470500 Rh7DG439800
rosa_wichuraiana	Rw2G031830 Rw7G037480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	67
AccB1I	GGYRCC	2 cut(s)	67, 749
AccB7I	CCANNNNNTGG	1 cut(s)	453
AccIII	TCCGGA	1 cut(s)	652
AclWI	GGATC	2 cut(s)	644, 663
AcsI	RAATTY	1 cut(s)	628
AcyI	GRCGYC	1 cut(s)	249
AfaI	GTAC	5 cut(s)	69, 467, 858, 998, 1063
AfiI	CCNNNNNNNGG	3 cut(s)	453, 779, 853
AflIII	ACRYGT	1 cut(s)	613
AgeI	ACCGGT	2 cut(s)	752, 772
AgsI	TTSAA	5 cut(s)	82, 269, 437, 628, 690
AhdI	GACNNNNNGTC	1 cut(s)	82
AluBI	AGCT	3 cut(s)	322, 370, 1018
AluI	AGCT	3 cut(s)	322, 370, 1018
AlwI	GGATC	2 cut(s)	644, 663
AlwNI	CAGNNNCTG	2 cut(s)	23, 155
Ama87I	CYCGRG	1 cut(s)	333
Aor13HI	TCCGGA	1 cut(s)	652
AoxI	GGCC	4 cut(s)	361, 455, 586, 660
ApeKI	GCWGC	1 cut(s)	329
ApoI	RAATTY	1 cut(s)	628
AsiGI	ACCGGT	2 cut(s)	752, 772
Asp718I	GGTACC	1 cut(s)	67
AspLEI	GCGC	2 cut(s)	785, 953
AspS9I	GGNCC	6 cut(s)	338, 362, 456, 587, 660, 905
AsuC2I	CCSGG	2 cut(s)	342, 780
AsuHPI	GGTGA	7 cut(s)	420, 608, 691, 815, 874, 921, 973
AvaI	CYCGRG	1 cut(s)	333
AvaII	GGWCC	2 cut(s)	338, 905
BaeGI	GKGCMC	2 cut(s)	162, 752
BanI	GGYRCC	2 cut(s)	67, 749
BbsI	GAAGAC	1 cut(s)	276
BbvI	GCAGC	1 cut(s)	341
BccI	CCATC	3 cut(s)	145, 170, 858
BceAI	ACGGC	1 cut(s)	376
BcnI	CCSGG	2 cut(s)	342, 780
BfaI	CTAG	1 cut(s)	525
BfoI	RGCGCY	1 cut(s)	786
BglII	AGATCT	1 cut(s)	720
BisI	GCNGC	1 cut(s)	330
BlsI	GCNGC	1 cut(s)	331
Bme1390I	CCNGG	2 cut(s)	342, 780
Bme18I	GGWCC	2 cut(s)	338, 905
BmeRI	GACNNNNNGTC	1 cut(s)	82
BmeT110I	CYCGRG	1 cut(s)	333
BmgT120I	GGNCC	6 cut(s)	338, 362, 456, 587, 660, 905
BmiI	GGNNCC	9 cut(s)	6, 69, 340, 364, 458, 589, 751, 768, 777
BmrFI	CCNGG	2 cut(s)	342, 780
BmsI	GCATC	2 cut(s)	16, 1046
BpiI	GAAGAC	1 cut(s)	276
BpmI	CTGGAG	1 cut(s)	605
BpuEI	CTTGAG	1 cut(s)	1004
BpuMI	CCSGG	2 cut(s)	342, 780
BsaBI	GATNNNNATC	1 cut(s)	654
BsaHI	GRCGYC	1 cut(s)	249
BsaJI	CCNNGG	4 cut(s)	334, 460, 564, 663
BsaWI	WCCGGW	3 cut(s)	652, 752, 772
BsaXI	ACNNNNNCTCC	2 cut(s)	603, 633
Bsc4I	CCNNNNNNNGG	3 cut(s)	453, 779, 853
Bse118I	RCCGGY	2 cut(s)	752, 772
Bse1I	ACTGG	2 cut(s)	622, 864
Bse3DI	GCAATG	1 cut(s)	86
Bse8I	GATNNNNATC	1 cut(s)	654
BseAI	TCCGGA	1 cut(s)	652
BseDI	CCNNGG	4 cut(s)	334, 460, 564, 663
BseGI	GGATG	1 cut(s)	133
BseJI	GATNNNNATC	1 cut(s)	654
BseLI	CCNNNNNNNGG	3 cut(s)	453, 779, 853
BseMI	GCAATG	1 cut(s)	86
BseMII	CTCAG	3 cut(s)	162, 396, 887
BseNI	ACTGG	2 cut(s)	622, 864
BseSI	GKGCMC	2 cut(s)	162, 752
BseXI	GCAGC	1 cut(s)	341
BseYI	CCCAGC	1 cut(s)	366
BshFI	GGCC	4 cut(s)	363, 457, 588, 662
BshNI	GGYRCC	2 cut(s)	67, 749
BshTI	ACCGGT	2 cut(s)	752, 772
BsiHKCI	CYCGRG	1 cut(s)	333
BsiSI	CCGG	6 cut(s)	342, 653, 753, 773, 780, 1045
BslFI	GGGAC	2 cut(s)	236, 905
BslI	CCNNNNNNNGG	3 cut(s)	453, 779, 853
BsmFI	GGGAC	2 cut(s)	236, 905
BsnI	GGCC	4 cut(s)	363, 457, 588, 662
BsoBI	CYCGRG	1 cut(s)	333
Bsp1286I	GDGCHC	2 cut(s)	162, 752
Bsp13I	TCCGGA	1 cut(s)	652
Bsp143I	GATC	4 cut(s)	169, 649, 655, 720
Bsp19I	CCATGG	1 cut(s)	663
BspANI	GGCC	4 cut(s)	363, 457, 588, 662
BspCNI	CTCAG	3 cut(s)	161, 397, 886
BspEI	TCCGGA	1 cut(s)	652
BspLI	GGNNCC	9 cut(s)	6, 69, 340, 364, 458, 589, 751, 768, 777
BspPI	GGATC	2 cut(s)	644, 663
BspT107I	GGYRCC	2 cut(s)	67, 749
BsrDI	GCAATG	1 cut(s)	86
BsrFI	RCCGGY	2 cut(s)	752, 772
BsrI	ACTGG	2 cut(s)	622, 864
BssAI	RCCGGY	2 cut(s)	752, 772
BssECI	CCNNGG	4 cut(s)	334, 460, 564, 663
BssMI	GATC	4 cut(s)	169, 649, 655, 720
BssNI	GRCGYC	1 cut(s)	249
BssT1I	CCWWGG	3 cut(s)	460, 564, 663
Bst4CI	ACNGT	1 cut(s)	766
Bst6I	CTCTTC	2 cut(s)	99, 302
BstACI	GRCGYC	1 cut(s)	249
BstC8I	GCNNGC	4 cut(s)	211, 546, 731, 955
BstDEI	CTNAG	4 cut(s)	148, 405, 873, 947
BstDSI	CCRYGG	1 cut(s)	663
BstEII	GGTNACC	1 cut(s)	803
BstF5I	GGATG	1 cut(s)	133
BstH2I	RGCGCY	1 cut(s)	786
BstHHI	GCGC	2 cut(s)	785, 953
BstKTI	GATC	4 cut(s)	172, 652, 658, 723
BstMBI	GATC	4 cut(s)	169, 649, 655, 720
BstMWI	GCNNNNNNNGC	4 cut(s)	11, 26, 210, 1054
BstNSI	RCATGY	2 cut(s)	213, 617
BstPI	GGTNACC	1 cut(s)	803
BstSCI	CCNGG	2 cut(s)	340, 778
BstSLI	GKGCMC	2 cut(s)	162, 752
BstV1I	GCAGC	1 cut(s)	341
BstV2I	GAAGAC	1 cut(s)	276
BstX2I	RGATCY	1 cut(s)	720
BstXI	CCANNNNNNTGG	1 cut(s)	262
BstYI	RGATCY	1 cut(s)	720
BsuRI	GGCC	4 cut(s)	363, 457, 588, 662
BtgI	CCRYGG	1 cut(s)	663
BtsCI	GGATG	1 cut(s)	133
Cac8I	GCNNGC	4 cut(s)	211, 546, 731, 955
CaiI	CAGNNNCTG	2 cut(s)	23, 155
CfoI	GCGC	2 cut(s)	785, 953
Cfr10I	RCCGGY	2 cut(s)	752, 772
Cfr13I	GGNCC	6 cut(s)	338, 362, 456, 587, 660, 905
CseI	GACGC	1 cut(s)	238
Csp6I	GTAC	5 cut(s)	68, 466, 857, 997, 1062
CspAI	ACCGGT	2 cut(s)	752, 772
CviAII	CATG	9 cut(s)	92, 114, 206, 210, 245, 274, 614, 664, 811
CviQI	GTAC	5 cut(s)	68, 466, 857, 997, 1062
DdeI	CTNAG	4 cut(s)	148, 405, 873, 947
DpnI	GATC	4 cut(s)	171, 651, 657, 722
DpnII	GATC	4 cut(s)	169, 649, 655, 720
DriI	GACNNNNNGTC	1 cut(s)	82
Eam1104I	CTCTTC	2 cut(s)	99, 302
Eam1105I	GACNNNNNGTC	1 cut(s)	82
EarI	CTCTTC	2 cut(s)	99, 302
Eco130I	CCWWGG	3 cut(s)	460, 564, 663
Eco47I	GGWCC	2 cut(s)	338, 905
Eco88I	CYCGRG	1 cut(s)	333
Eco91I	GGTNACC	1 cut(s)	803
EcoO109I	RGGNCCY	1 cut(s)	338
EcoO65I	GGTNACC	1 cut(s)	803
EcoRI	GAATTC	1 cut(s)	628
EcoT14I	CCWWGG	3 cut(s)	460, 564, 663
EcoT22I	ATGCAT	2 cut(s)	115, 211
ErhI	CCWWGG	3 cut(s)	460, 564, 663
FaeI	CATG	9 cut(s)	95, 117, 209, 213, 248, 277, 617, 667, 814
FaqI	GGGAC	2 cut(s)	236, 905
FatI	CATG	9 cut(s)	91, 113, 205, 209, 244, 273, 613, 663, 810
Fnu4HI	GCNGC	1 cut(s)	330
FokI	GGATG	1 cut(s)	120
Fsp4HI	GCNGC	1 cut(s)	330
FspBI	CTAG	1 cut(s)	525
GlaI	GCGC	2 cut(s)	784, 952
GluI	GCNGC	1 cut(s)	330
GsaI	CCCAGC	1 cut(s)	370
GsuI	CTGGAG	1 cut(s)	605
HaeII	RGCGCY	1 cut(s)	786
HaeIII	GGCC	4 cut(s)	363, 457, 588, 662
HapII	CCGG	6 cut(s)	342, 653, 753, 773, 780, 1045
HgaI	GACGC	1 cut(s)	238
HhaI	GCGC	2 cut(s)	785, 953
Hin1I	GRCGYC	1 cut(s)	249
Hin1II	CATG	9 cut(s)	95, 117, 209, 213, 248, 277, 617, 667, 814
Hin6I	GCGC	2 cut(s)	783, 951
HinP1I	GCGC	2 cut(s)	783, 951
HincII	GTYRAC	1 cut(s)	796
HindII	GTYRAC	1 cut(s)	796
HinfI	GANTC	4 cut(s)	146, 152, 278, 686
HpaII	CCGG	6 cut(s)	342, 653, 753, 773, 780, 1045
HphI	GGTGA	7 cut(s)	420, 608, 691, 815, 874, 921, 973
Hpy166II	GTNNAC	6 cut(s)	428, 468, 709, 762, 796, 865
Hpy188I	TCNGA	2 cut(s)	151, 406
Hpy188III	TCNNGA	2 cut(s)	647, 653
Hpy8I	GTNNAC	6 cut(s)	428, 468, 709, 762, 796, 865
Hpy99I	CGWCG	1 cut(s)	803
HpyAV	CCTTC	1 cut(s)	507
HpyCH4III	ACNGT	1 cut(s)	766
HpyCH4IV	ACGT	1 cut(s)	798
HpyCH4V	TGCA	8 cut(s)	14, 91, 113, 209, 213, 733, 814, 1037
HpyF10VI	GCNNNNNNNGC	4 cut(s)	11, 26, 210, 1054
HpyF3I	CTNAG	4 cut(s)	148, 405, 873, 947
HpySE526I	ACGT	1 cut(s)	798
Hsp92I	GRCGYC	1 cut(s)	249
Hsp92II	CATG	9 cut(s)	95, 117, 209, 213, 248, 277, 617, 667, 814
HspAI	GCGC	2 cut(s)	783, 951
Kpn2I	TCCGGA	1 cut(s)	652
KpnI	GGTACC	1 cut(s)	71
Kzo9I	GATC	4 cut(s)	169, 649, 655, 720
LmnI	GCTCC	1 cut(s)	10
Lsp1109I	GCAGC	1 cut(s)	341
LweI	GCATC	2 cut(s)	16, 1046
MaeI	CTAG	1 cut(s)	525
MaeII	ACGT	1 cut(s)	798
MaeIII	GTNAC	4 cut(s)	356, 697, 803, 979
MalI	GATC	4 cut(s)	171, 651, 657, 722
MboI	GATC	4 cut(s)	169, 649, 655, 720
MboII	GAAGA	5 cut(s)	116, 281, 289, 503, 581
MfeI	CAATTG	1 cut(s)	985
MflI	RGATCY	1 cut(s)	720
MhlI	GDGCHC	2 cut(s)	162, 752
MluCI	AATT	4 cut(s)	506, 628, 985, 1066
MlyI	GAGTC	1 cut(s)	140
MmeI	TCCRAC	2 cut(s)	32, 256
Mph1103I	ATGCAT	2 cut(s)	115, 211
MroI	TCCGGA	1 cut(s)	652
MspI	CCGG	6 cut(s)	342, 653, 753, 773, 780, 1045
MspR9I	CCNGG	2 cut(s)	342, 780
MunI	CAATTG	1 cut(s)	985
MwoI	GCNNNNNNNGC	4 cut(s)	11, 26, 210, 1054
NciI	CCSGG	2 cut(s)	342, 780
NcoI	CCATGG	1 cut(s)	663
NdeII	GATC	4 cut(s)	169, 649, 655, 720
NlaIII	CATG	9 cut(s)	95, 117, 209, 213, 248, 277, 617, 667, 814
NlaIV	GGNNCC	9 cut(s)	6, 69, 340, 364, 458, 589, 751, 768, 777
NmuCI	GTSAC	3 cut(s)	697, 803, 979
NsiI	ATGCAT	2 cut(s)	115, 211
NspI	RCATGY	2 cut(s)	213, 617
PaeI	GCATGC	1 cut(s)	213
PciI	ACATGT	1 cut(s)	613
PfeI	GAWTC	3 cut(s)	152, 278, 686
PflFI	GACNNNGTC	1 cut(s)	917
PflMI	CCANNNNNTGG	1 cut(s)	453
PinAI	ACCGGT	2 cut(s)	752, 772
PkrI	GCNGC	1 cut(s)	331
PleI	GAGTC	1 cut(s)	140
PpsI	GAGTC	1 cut(s)	140
PpuMI	RGGWCCY	1 cut(s)	338
PscI	ACATGT	1 cut(s)	613
Psp5II	RGGWCCY	1 cut(s)	338
PspEI	GGTNACC	1 cut(s)	803
PspFI	CCCAGC	1 cut(s)	366
PspN4I	GGNNCC	9 cut(s)	6, 69, 340, 364, 458, 589, 751, 768, 777
PspPI	GGNCC	6 cut(s)	338, 362, 456, 587, 660, 905
PspPPI	RGGWCCY	1 cut(s)	338
PstNI	CAGNNNCTG	2 cut(s)	23, 155
PsuI	RGATCY	1 cut(s)	720
PsyI	GACNNNGTC	1 cut(s)	917
RsaI	GTAC	5 cut(s)	69, 467, 858, 998, 1063
RsaNI	GTAC	5 cut(s)	68, 466, 857, 997, 1062
SatI	GCNGC	1 cut(s)	330
Sau3AI	GATC	4 cut(s)	169, 649, 655, 720
Sau96I	GGNCC	6 cut(s)	338, 362, 456, 587, 660, 905
SchI	GAGTC	1 cut(s)	140
ScrFI	CCNGG	2 cut(s)	342, 780
SduI	GDGCHC	2 cut(s)	162, 752
SetI	ASST	9 cut(s)	69, 126, 324, 372, 559, 598, 801, 810, 1020
SfaNI	GCATC	2 cut(s)	16, 1046
SinI	GGWCC	2 cut(s)	338, 905
SmlI	CTYRAG	1 cut(s)	1019
SmoI	CTYRAG	1 cut(s)	1019
SphI	GCATGC	1 cut(s)	213
Sse9I	AATT	4 cut(s)	506, 628, 985, 1066
SspMI	CTAG	1 cut(s)	525
StyD4I	CCNGG	2 cut(s)	340, 778
StyI	CCWWGG	3 cut(s)	460, 564, 663
TaaI	ACNGT	1 cut(s)	766
TaiI	ACGT	1 cut(s)	801
TaqI	TCGA	1 cut(s)	48
TasI	AATT	4 cut(s)	506, 628, 985, 1066
TatI	WGTACW	1 cut(s)	996
TfiI	GAWTC	3 cut(s)	152, 278, 686
TseFI	GTSAC	3 cut(s)	697, 803, 979
TseI	GCWGC	1 cut(s)	329
Tsp45I	GTSAC	3 cut(s)	697, 803, 979
TspDTI	ATGAA	1 cut(s)	144
Tth111I	GACNNNGTC	1 cut(s)	917
Van91I	CCANNNNNTGG	1 cut(s)	453
VpaK11BI	GGWCC	2 cut(s)	338, 905
XapI	RAATTY	1 cut(s)	628
XceI	RCATGY	2 cut(s)	213, 617
XspI	CTAG	1 cut(s)	525
Zsp2I	ATGCAT	2 cut(s)	115, 211

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.