MD03G1016800.v1.1

Enoyl- acyl-carrier-protein reductase NADH , chloroplastic-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Forward (+)
1327234 .. 1331063
3830 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1016800.v1.1.491

Sequence Viewer

Length: 1191 bp
ATGGCAACGACTGCTGCTTCCAGCCTGCAAATGGCAACTGCCAGACCCTGCATTTCTTCTTCTCGGAGAGCTTTCGGGTCAAGTTCTAAAATGCTTAATGACAATTTTAAGGTGGCTTCATGGTCTAAGCTTTCGAGTACATGTCATACATCATCTGTACAATCTTTCCAACGGAGCTTCACATCATCATCTATGAAAATGGATAAGTTTGTTACAAGGGCAATGGCTGGAGCTAGTGAAAACAAGCCTGTCTCGGGGTTGCCAATTGATTTGAAAGGAAAGAGAGCATTTATTGCTGGTGTAGCAGATGATAATGGATATGGTTGGGCAATCGCAAAATCTCTAGCTGCTGCAGGTGCTGAAATCCTTGTGGGAACGTGGGTGCCTGCTTTGAACATTTTTGAGTCCAGCCTGCGACGTGGAAAGTTTGATGAATCACGCGTGTTACCAGATGGTTCTTTAATGGAGATTACCAAAGTATATCCCCTAGATGCTGTGTTTGACAACCCTGAGGATGTTCCTGAGGAGATCAAAACAAATAAGCGCTATGCAGGTTCCAGTAATTGGACTGTCCAGGAAGCTGCTGAATGTGTGAAAAATGATTTTGGCAGCATTGACATTCTTGTGCACTCGCTTGCAAATGGACCGGAGGTTGTTAAACCTCTGTTGGAGACGTCCAGAAAAGGATATCTCGCCGCTATTTCTGCATCTAGTTATTCCTATGTTTCTTTACTCAAGCATTTCCTCCCAATAATTAATCCAGGCAAGCTTCCACGCGGTTCTTCAATTTCTCTTACATATATTGCTTCCGAGCGGATCATTCCGGGATATGGTGGAGGTATGAGCTCTGCAAAAGCTGCTCTTGAGAGTGATACTCGAGTGCTTGCTTTCGAAGCAGGAAGAAGAAAGGGAATTAGAGTCAACACAATATCTGCTGGTCCGCTAAGAAGCCGTGCTGCAAAAGCGATTGGATTCATTGATATGATGATTGACTACTCATCAGCCAATGCACCTCTAGAAAAAGAACTATCCGCAGATGAAGTAGGAAACACAGCTGCTTTCTTGGCATCACCTTTGGCCTCTGCCATTACCGGCGGTGTTATATACGTAGACAATGGTTTGAACGCAATGGGTGTCGGAGTTGACAGCCCAATTTTTGAGAACCTCAACATTCCGAAGGCTCAGCACTGA

Protein Analysis

397

Amino Acids

42.05

Weight (kDa)

8.93

Isoelectric Point (pI)

42.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
adh_short_C2 PF13561 190 - 375 7e-48 Enoyl-(Acyl carrier protein) reductase
adh_short PF00106 190 - 322 6.1e-08 short chain dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 344
AatII GACGTC 1 cut(s) 677
Acc36I ACCTGC 2 cut(s) 344, 542
AccB1I GGYRCC 1 cut(s) 382
AccB7I CCANNNNNTGG 1 cut(s) 564
AccBSI CCGCTC 1 cut(s) 814
AccI GTMKAC 1 cut(s) 1110
AccII CGCG 2 cut(s) 441, 777
AciI CCGC 6 cut(s) 696, 777, 814, 941, 1032, 1095
AclWI GGATC 1 cut(s) 824
AcyI GRCGYC 1 cut(s) 674
AfaI GTAC 2 cut(s) 139, 159
AfeI AGCGCT 1 cut(s) 545
AfiI CCNNNNNNNGG 4 cut(s) 31, 254, 564, 830
AflIII ACRYGT 2 cut(s) 140, 439
AgsI TTSAA 4 cut(s) 274, 394, 786, 1123
AjiI CACGTC 1 cut(s) 419
AjnI CCWGG 2 cut(s) 573, 760
Alw21I GWGCWC 2 cut(s) 630, 848
Alw26I GTCTC 2 cut(s) 256, 665
Alw44I GTGCAC 1 cut(s) 626
AlwI GGATC 1 cut(s) 824
AlwNI CAGNNNCTG 2 cut(s) 48, 359
Ama87I CYCGRG 2 cut(s) 253, 876
Aor51HI AGCGCT 1 cut(s) 545
AoxI GGCC 1 cut(s) 1077
ApaLI GTGCAC 1 cut(s) 626
ApeKI GCWGC 8 cut(s) 14, 347, 350, 581, 609, 857, 956, 1055
AseI ATTAAT 1 cut(s) 756
AspLEI GCGC 1 cut(s) 546
AspS9I GGNCC 2 cut(s) 644, 938
AsuC2I CCSGG 1 cut(s) 825
AsuHPI GGTGA 1 cut(s) 1062
AsuII TTCGAA 1 cut(s) 891
AvaI CYCGRG 2 cut(s) 253, 876
AvaII GGWCC 2 cut(s) 644, 938
AxyI CCTNAGG 2 cut(s) 510, 522
BaeGI GKGCMC 1 cut(s) 630
BaeI ACNNNNGTAYC 2 cut(s) 864, 897
BanI GGYRCC 1 cut(s) 382
BanII GRGCYC 1 cut(s) 848
Bbv12I GWGCWC 2 cut(s) 630, 848
BbvI GCAGC 7 cut(s) 334, 337, 568, 621, 844, 943, 1042
BccI CCATC 1 cut(s) 446
BceAI ACGGC 1 cut(s) 936
BciT130I CCWGG 2 cut(s) 575, 762
BcnI CCSGG 1 cut(s) 825
BcoDI GTCTC 2 cut(s) 256, 665
BfaI CTAG 5 cut(s) 234, 344, 488, 711, 1016
BfmI CTRYAG 1 cut(s) 351
BfoI RGCGCY 1 cut(s) 547
BfuAI ACCTGC 2 cut(s) 344, 542
BisI GCNGC 9 cut(s) 15, 348, 351, 582, 610, 696, 858, 957, 1056
BlpI GCTNAGC 1 cut(s) 1182
BlsI GCNGC 9 cut(s) 16, 349, 352, 583, 611, 697, 859, 958, 1057
Bme1390I CCNGG 3 cut(s) 575, 762, 825
Bme18I GGWCC 2 cut(s) 644, 938
BmeT110I CYCGRG 2 cut(s) 253, 876
BmgBI CACGTC 1 cut(s) 419
BmgT120I GGNCC 2 cut(s) 644, 938
BmiI GGNNCC 2 cut(s) 384, 556
BmrFI CCNGG 3 cut(s) 575, 762, 825
BmsI GCATC 3 cut(s) 481, 716, 1076
BplI GAGNNNNNCTC 2 cut(s) 859, 891
BpmI CTGGAG 1 cut(s) 249
Bpu1102I GCTNAGC 1 cut(s) 1182
Bpu14I TTCGAA 1 cut(s) 891
BpuEI CTTGAG 2 cut(s) 719, 884
BpuMI CCSGG 1 cut(s) 825
BsaAI YACGTR 1 cut(s) 1108
BsaHI GRCGYC 1 cut(s) 674
BsaWI WCCGGW 1 cut(s) 646
Bsc4I CCNNNNNNNGG 4 cut(s) 31, 254, 564, 830
Bse118I RCCGGY 1 cut(s) 1091
Bse1I ACTGG 1 cut(s) 558
Bse21I CCTNAGG 2 cut(s) 510, 522
Bse3DI GCAATG 2 cut(s) 228, 1134
BseBI CCWGG 2 cut(s) 575, 762
BseGI GGATG 1 cut(s) 520
BseLI CCNNNNNNNGG 4 cut(s) 31, 254, 564, 830
BseMI GCAATG 2 cut(s) 228, 1134
BseMII CTCAG 2 cut(s) 501, 513
BseNI ACTGG 1 cut(s) 558
BseRI GAGGAG 1 cut(s) 539
BseSI GKGCMC 1 cut(s) 630
BseXI GCAGC 7 cut(s) 334, 337, 568, 621, 844, 943, 1042
Bsh1236I CGCG 2 cut(s) 441, 777
BshFI GGCC 1 cut(s) 1079
BshNI GGYRCC 1 cut(s) 382
BsiHKAI GWGCWC 2 cut(s) 630, 848
BsiHKCI CYCGRG 2 cut(s) 253, 876
BsiSI CCGG 3 cut(s) 647, 824, 1092
BslI CCNNNNNNNGG 4 cut(s) 31, 254, 564, 830
BsmAI GTCTC 2 cut(s) 256, 665
BsmBI CGTCTC 1 cut(s) 665
BsnI GGCC 1 cut(s) 1079
BsoBI CYCGRG 2 cut(s) 253, 876
Bsp119I TTCGAA 1 cut(s) 891
Bsp1286I GDGCHC 2 cut(s) 630, 848
Bsp1407I TGTACA 1 cut(s) 157
Bsp143I GATC 2 cut(s) 528, 816
Bsp1720I GCTNAGC 1 cut(s) 1182
BspACI CCGC 6 cut(s) 696, 777, 814, 941, 1032, 1095
BspANI GGCC 1 cut(s) 1079
BspCNI CTCAG 2 cut(s) 502, 514
BspFNI CGCG 2 cut(s) 441, 777
BspLI GGNNCC 2 cut(s) 384, 556
BspMAI CTGCAG 1 cut(s) 355
BspMI ACCTGC 2 cut(s) 344, 542
BspPI GGATC 1 cut(s) 824
BspT104I TTCGAA 1 cut(s) 891
BspT107I GGYRCC 1 cut(s) 382
BsrBI CCGCTC 1 cut(s) 814
BsrDI GCAATG 2 cut(s) 228, 1134
BsrFI RCCGGY 1 cut(s) 1091
BsrGI TGTACA 1 cut(s) 157
BsrI ACTGG 1 cut(s) 558
BssAI RCCGGY 1 cut(s) 1091
BssMI GATC 2 cut(s) 528, 816
BssNI GRCGYC 1 cut(s) 674
Bst2UI CCWGG 2 cut(s) 575, 762
Bst4CI ACNGT 1 cut(s) 571
BstACI GRCGYC 1 cut(s) 674
BstAPI GCANNNNNTGC 3 cut(s) 11, 293, 857
BstAUI TGTACA 1 cut(s) 157
BstBAI YACGTR 1 cut(s) 1108
BstBI TTCGAA 1 cut(s) 891
BstC8I GCNNGC 6 cut(s) 26, 387, 413, 636, 767, 885
BstDEI CTNAG 5 cut(s) 126, 510, 522, 944, 1182
BstF5I GGATG 1 cut(s) 520
BstFNI CGCG 2 cut(s) 441, 777
BstH2I RGCGCY 1 cut(s) 547
BstHHI GCGC 1 cut(s) 546
BstKTI GATC 2 cut(s) 531, 819
BstMAI GTCTC 2 cut(s) 256, 665
BstMBI GATC 2 cut(s) 528, 816
BstMWI GCNNNNNNNGC 9 cut(s) 11, 293, 302, 356, 704, 857, 893, 962, 1064
BstNI CCWGG 2 cut(s) 575, 762
BstNSI RCATGY 1 cut(s) 144
BstSCI CCNGG 3 cut(s) 573, 760, 823
BstSFI CTRYAG 1 cut(s) 351
BstSLI GKGCMC 1 cut(s) 630
BstSNI TACGTA 1 cut(s) 1108
BstUI CGCG 2 cut(s) 441, 777
BstV1I GCAGC 7 cut(s) 334, 337, 568, 621, 844, 943, 1042
Bsu36I CCTNAGG 2 cut(s) 510, 522
BsuRI GGCC 1 cut(s) 1079
BtrI CACGTC 1 cut(s) 419
BtsCI GGATG 1 cut(s) 520
BtsIMutI CAGTG 1 cut(s) 1186
BveI ACCTGC 2 cut(s) 344, 542
Cac8I GCNNGC 6 cut(s) 26, 387, 413, 636, 767, 885
CaiI CAGNNNCTG 2 cut(s) 48, 359
CfoI GCGC 1 cut(s) 546
Cfr10I RCCGGY 1 cut(s) 1091
Cfr13I GGNCC 2 cut(s) 644, 938
Csp6I GTAC 2 cut(s) 138, 158
CviAII CATG 2 cut(s) 120, 141
CviQI GTAC 2 cut(s) 138, 158
DdeI CTNAG 5 cut(s) 126, 510, 522, 944, 1182
DpnI GATC 2 cut(s) 530, 818
DpnII GATC 2 cut(s) 528, 816
Ecl136II GAGCTC 1 cut(s) 846
Eco105I TACGTA 1 cut(s) 1108
Eco24I GRGCYC 1 cut(s) 848
Eco32I GATATC 1 cut(s) 689
Eco47I GGWCC 2 cut(s) 644, 938
Eco47III AGCGCT 1 cut(s) 545
Eco53kI GAGCTC 1 cut(s) 846
Eco81I CCTNAGG 2 cut(s) 510, 522
Eco88I CYCGRG 2 cut(s) 253, 876
EcoICRI GAGCTC 1 cut(s) 846
EcoRII CCWGG 2 cut(s) 573, 760
EcoRV GATATC 1 cut(s) 689
EcoT38I GRGCYC 1 cut(s) 848
Esp3I CGTCTC 1 cut(s) 665
FaeI CATG 2 cut(s) 123, 144
FalI AAGNNNNNCTT 2 cut(s) 846, 878
FatI CATG 2 cut(s) 119, 140
FblI GTMKAC 1 cut(s) 1110
Fnu4HI GCNGC 9 cut(s) 15, 348, 351, 582, 610, 696, 858, 957, 1056
FokI GGATG 1 cut(s) 527
FriOI GRGCYC 1 cut(s) 848
Fsp4HI GCNGC 9 cut(s) 15, 348, 351, 582, 610, 696, 858, 957, 1056
FspBI CTAG 5 cut(s) 234, 344, 488, 711, 1016
GlaI GCGC 1 cut(s) 545
GluI GCNGC 9 cut(s) 15, 348, 351, 582, 610, 696, 858, 957, 1056
GsuI CTGGAG 1 cut(s) 249
HaeII RGCGCY 1 cut(s) 547
HaeIII GGCC 1 cut(s) 1079
HapII CCGG 3 cut(s) 647, 824, 1092
HhaI GCGC 1 cut(s) 546
Hin1I GRCGYC 1 cut(s) 674
Hin1II CATG 2 cut(s) 123, 144
Hin6I GCGC 1 cut(s) 544
HinP1I GCGC 1 cut(s) 544
HincII GTYRAC 2 cut(s) 922, 1144
HindII GTYRAC 2 cut(s) 922, 1144
HindIII AAGCTT 2 cut(s) 128, 767
HinfI GANTC 4 cut(s) 404, 434, 918, 972
HpaII CCGG 3 cut(s) 647, 824, 1092
HphI GGTGA 1 cut(s) 1062
Hpy166II GTNNAC 4 cut(s) 628, 922, 1111, 1144
Hpy188I TCNGA 4 cut(s) 66, 811, 1139, 1176
Hpy188III TCNNGA 4 cut(s) 521, 678, 863, 1016
Hpy8I GTNNAC 4 cut(s) 628, 922, 1111, 1144
Hpy99I CGWCG 1 cut(s) 420
HpyAV CCTTC 1 cut(s) 1171
HpyCH4III ACNGT 1 cut(s) 571
HpyCH4IV ACGT 4 cut(s) 377, 418, 674, 1107
HpyF10VI GCNNNNNNNGC 9 cut(s) 11, 293, 302, 356, 704, 857, 893, 962, 1064
HpyF3I CTNAG 5 cut(s) 126, 510, 522, 944, 1182
HpySE526I ACGT 4 cut(s) 377, 418, 674, 1107
Hsp92I GRCGYC 1 cut(s) 674
Hsp92II CATG 2 cut(s) 123, 144
HspAI GCGC 1 cut(s) 544
Kzo9I GATC 2 cut(s) 528, 816
LmnI GCTCC 2 cut(s) 174, 230
Lsp1109I GCAGC 7 cut(s) 334, 337, 568, 621, 844, 943, 1042
LweI GCATC 3 cut(s) 481, 716, 1076
MaeI CTAG 5 cut(s) 234, 344, 488, 711, 1016
MaeII ACGT 4 cut(s) 377, 418, 674, 1107
MaeIII GTNAC 2 cut(s) 211, 444
MalI GATC 2 cut(s) 530, 818
MbiI CCGCTC 1 cut(s) 814
MboI GATC 2 cut(s) 528, 816
MboII GAAGA 5 cut(s) 48, 51, 774, 912, 915
MfeI CAATTG 1 cut(s) 264
MhlI GDGCHC 2 cut(s) 630, 848
MluCI AATT 7 cut(s) 103, 264, 562, 753, 786, 912, 1152
MluI ACGCGT 1 cut(s) 439
MlyI GAGTC 2 cut(s) 413, 927
MmeI TCCRAC 3 cut(s) 193, 648, 1117
MnlI CCTC 9 cut(s) 505, 517, 643, 672, 755, 830, 1023, 1090, 1175
MseI TTAA 5 cut(s) 96, 108, 461, 657, 756
MslI CAYNNNNRTG 2 cut(s) 623, 980
MspA1I CMGCKG 1 cut(s) 1055
MspI CCGG 3 cut(s) 647, 824, 1092
MspR9I CCNGG 3 cut(s) 575, 762, 825
MunI CAATTG 1 cut(s) 264
MvaI CCWGG 2 cut(s) 575, 762
MvnI CGCG 2 cut(s) 441, 777
MwoI GCNNNNNNNGC 9 cut(s) 11, 293, 302, 356, 704, 857, 893, 962, 1064
NciI CCSGG 1 cut(s) 825
NdeII GATC 2 cut(s) 528, 816
NlaIII CATG 2 cut(s) 123, 144
NlaIV GGNNCC 2 cut(s) 384, 556
NspI RCATGY 1 cut(s) 144
NspV TTCGAA 1 cut(s) 891
PaeR7I CTCGAG 1 cut(s) 876
PaqCI CACCTGC 1 cut(s) 344
PciI ACATGT 1 cut(s) 140
PfeI GAWTC 2 cut(s) 434, 972
PflMI CCANNNNNTGG 1 cut(s) 564
PfoI TCCNGGA 2 cut(s) 573, 823
PkrI GCNGC 9 cut(s) 16, 349, 352, 583, 611, 697, 859, 958, 1057
PleI GAGTC 2 cut(s) 412, 926
PpsI GAGTC 2 cut(s) 412, 926
Ppu21I YACGTR 1 cut(s) 1108
PscI ACATGT 1 cut(s) 140
PshBI ATTAAT 1 cut(s) 756
Psp124BI GAGCTC 1 cut(s) 848
Psp6I CCWGG 2 cut(s) 573, 760
PspGI CCWGG 2 cut(s) 573, 760
PspN4I GGNNCC 2 cut(s) 384, 556
PspPI GGNCC 2 cut(s) 644, 938
PspXI VCTCGAGB 1 cut(s) 876
PstI CTGCAG 1 cut(s) 355
PstNI CAGNNNCTG 2 cut(s) 48, 359
PvuII CAGCTG 1 cut(s) 1055
RsaI GTAC 2 cut(s) 139, 159
RsaNI GTAC 2 cut(s) 138, 158
RseI CAYNNNNRTG 2 cut(s) 623, 980
SacI GAGCTC 1 cut(s) 848
SaqAI TTAA 5 cut(s) 96, 108, 461, 657, 756
SatI GCNGC 9 cut(s) 15, 348, 351, 582, 610, 696, 858, 957, 1056
Sau3AI GATC 2 cut(s) 528, 816
Sau96I GGNCC 2 cut(s) 644, 938
SchI GAGTC 2 cut(s) 413, 927
ScrFI CCNGG 3 cut(s) 575, 762, 825
SduI GDGCHC 2 cut(s) 630, 848
SfaNI GCATC 3 cut(s) 481, 716, 1076
SfcI CTRYAG 1 cut(s) 351
Sfr274I CTCGAG 1 cut(s) 876
SfuI TTCGAA 1 cut(s) 891
SinI GGWCC 2 cut(s) 644, 938
SlaI CTCGAG 1 cut(s) 876
SmiMI CAYNNNNRTG 2 cut(s) 623, 980
SmlI CTYRAG 3 cut(s) 734, 863, 876
SmoI CTYRAG 3 cut(s) 734, 863, 876
SnaBI TACGTA 1 cut(s) 1108
Sse9I AATT 7 cut(s) 103, 264, 562, 753, 786, 912, 1152
SsiI CCGC 6 cut(s) 696, 777, 814, 941, 1032, 1095
SspMI CTAG 5 cut(s) 234, 344, 488, 711, 1016
SstI GAGCTC 1 cut(s) 848
StyD4I CCNGG 3 cut(s) 573, 760, 823
TaaI ACNGT 1 cut(s) 571
TaiI ACGT 4 cut(s) 380, 421, 677, 1110
TaqI TCGA 3 cut(s) 134, 877, 891
TasI AATT 7 cut(s) 103, 264, 562, 753, 786, 912, 1152
TatI WGTACW 2 cut(s) 137, 157
TauI GCSGC 1 cut(s) 698
TfiI GAWTC 2 cut(s) 434, 972
Tru1I TTAA 5 cut(s) 96, 108, 461, 657, 756
Tru9I TTAA 5 cut(s) 96, 108, 461, 657, 756
TseI GCWGC 8 cut(s) 14, 347, 350, 581, 609, 857, 956, 1055
TspDTI ATGAA 5 cut(s) 108, 209, 447, 964, 1053
TspGWI ACGGA 1 cut(s) 187
Van91I CCANNNNNTGG 1 cut(s) 564
VneI GTGCAC 1 cut(s) 626
VpaK11BI GGWCC 2 cut(s) 644, 938
VspI ATTAAT 1 cut(s) 756
XbaI TCTAGA 1 cut(s) 1015
XceI RCATGY 1 cut(s) 144
XcmI CCANNNNNNNNNTGG 1 cut(s) 28
XhoI CTCGAG 1 cut(s) 876
XmiI GTMKAC 1 cut(s) 1110
XspI CTAG 5 cut(s) 234, 344, 488, 711, 1016
ZraI GACGTC 1 cut(s) 675
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.