Rw0G023190

Enoyl- acyl-carrier-protein reductase NADH , chloroplastic-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig01079
Physical Location & Seq
Forward (+)
34218 .. 37859
3642 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G023190.1

Sequence Viewer

Length: 1227 bp
ATGGATGGGAATTATGATTTAGTGTATGAATGTAGATTTCATTTATTGAAGATGGCAACTACTGCTGCTTCCAGTCTGCAAATGGCAACAGCAAGACCCTGCATTTCCTCTTCTCATAGAGTTTTCAGGTCTGGTGCCGCTATGCTTCACGGCAATGTTAAAGTGGTGTCATCGTCTAAGCTTTCGAGTGCGTGCCATATATCATCTGTGCAATCTTTCCAGCGGAGCTTTACATCATCGTCTTTGAAAATGGATAAGTTCGTTACAAAGGCAATGGCTGGATCTAGTGAGAACAAGCCCTCTGGGTTGCCAATTAATCTGAAAGGTAAGAGAGCATTCATTGCTGGTGTAGCTGATGATAATGGATATGGGTGGGCTATTGCAAAATCTCTAGCTGCTGCAGGTGCTGAAATTCTCGTGGGAACTTGGGTCCCTGCTTTGAACATTTTTGAGTCCAGCCTGCGACGTGGGAAGTTTGATGAATCACGCGTGTTACCAGATGGTTCTTTGATGGAGATTACTAAAGTATATCCCCTTGATGCAGTTTTTGATACCCTTGATGATGTTCCTGAGGAGGTGAAATCAAATAAGCGCTATGCTGGATCCAGTAACTGGACTGTCCAGGAAGCTGCTGAAGCCGTGAAGAGTGATTTTGGAAGTATTGACATTCTTGTTCACTCCCTTGCTAATGGACCAGAGGTCACTAAACCTCTGTTGGAGACATCCCGGAAAGGATATCTTGCTGCTATATCTGCATCAAGTTATTCTTATGTTTCATTACTGAAGCATTTCCTCCCAATAATTAATCCAGGTGGTTCTTCACTTTCTCTTACATACATTGCTTCTGAGAGGATAATTCCTGGATACGGTGGAGGTATGAGCTCTGCAAAAGCTGCGCTTGAGAGTGACACTCGAGTGCTTGCTTTTGAAGCGGGCAGAAAAAAGAGAATTCGGGTCAACACAATATCTGCTGGTCCACTAAGAAGCCGTGCTGCCAAAGCAATTGGATTCATTGATATGATGATTGACTATTCACTAGTCAATGCACCTCTGCAAAAAGAACTATCTGCAGAGGAGGTAGGGAACACAGCCGCTTTCTTGGCATCACCTTTGGCTTCTGCCATCACCGGTTCTGTTATATACGTTGATAATGGCTTGAACACAATGGGTGTCGGAGTTGACAGTCCAATTTTTGAGAAACTTGACATTCCCAAGGATCAGCACTGA

Protein Analysis

408

Amino Acids

43.52

Weight (kDa)

8.75

Isoelectric Point (pI)

42.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
adh_short_C2 PF13561 206 - 387 8.7e-50 Enoyl-(Acyl carrier protein) reductase
adh_short PF00106 206 - 334 5e-08 short chain dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 392
Acc36I ACCTGC 1 cut(s) 392
AccB1I GGYRCC 1 cut(s) 134
AccB7I CCANNNNNTGG 1 cut(s) 612
AccII CGCG 1 cut(s) 489
AciI CCGC 4 cut(s) 138, 223, 932, 1092
AclWI GGATC 4 cut(s) 289, 597, 610, 1224
AcsI RAATTY 2 cut(s) 411, 948
AcuI CTGAAG 2 cut(s) 654, 803
AfeI AGCGCT 1 cut(s) 593
AfiI CCNNNNNNNGG 2 cut(s) 612, 866
AflIII ACRYGT 1 cut(s) 487
AgeI ACCGGT 1 cut(s) 1127
AgsI TTSAA 5 cut(s) 49, 247, 442, 929, 1159
AhdI GACNNNNNGTC 1 cut(s) 698
AhlI ACTAGT 1 cut(s) 1036
AjiI CACGTC 1 cut(s) 467
AjnI CCWGG 3 cut(s) 621, 808, 859
AleI CACNNNNGTG 1 cut(s) 914
AluBI AGCT 7 cut(s) 181, 228, 353, 395, 629, 882, 893
AluI AGCT 7 cut(s) 181, 228, 353, 395, 629, 882, 893
Alw21I GWGCWC 1 cut(s) 884
Alw26I GTCTC 1 cut(s) 713
AlwI GGATC 4 cut(s) 289, 597, 610, 1224
AlwNI CAGNNNCTG 2 cut(s) 407, 612
Ama87I CYCGRG 1 cut(s) 912
Aor51HI AGCGCT 1 cut(s) 593
ApeKI GCWGC 7 cut(s) 65, 395, 398, 629, 743, 893, 992
ApoI RAATTY 2 cut(s) 411, 948
AseI ATTAAT 2 cut(s) 315, 804
AsiGI ACCGGT 1 cut(s) 1127
Asp700I GAANNNNTTC 1 cut(s) 788
AspLEI GCGC 2 cut(s) 594, 898
AspS9I GGNCC 3 cut(s) 430, 692, 974
AsuC2I CCSGG 1 cut(s) 727
AsuHPI GGTGA 3 cut(s) 589, 1098, 1117
AvaI CYCGRG 1 cut(s) 912
AvaII GGWCC 3 cut(s) 430, 692, 974
AxyI CCTNAGG 1 cut(s) 570
BamHI GGATCC 1 cut(s) 602
BanI GGYRCC 1 cut(s) 134
BanII GRGCYC 1 cut(s) 884
BauI CACGAG 1 cut(s) 416
Bbv12I GWGCWC 1 cut(s) 884
BbvI GCAGC 7 cut(s) 52, 382, 385, 616, 730, 880, 979
BccI CCATC 4 cut(s) 46, 494, 505, 1130
BceAI ACGGC 3 cut(s) 166, 623, 972
BciT130I CCWGG 3 cut(s) 623, 810, 861
BciVI GTATCC 1 cut(s) 857
BcnI CCSGG 1 cut(s) 727
BcoDI GTCTC 1 cut(s) 713
BcuI ACTAGT 1 cut(s) 1036
BfaI CTAG 3 cut(s) 285, 392, 1037
BfmI CTRYAG 2 cut(s) 399, 1068
BfoI RGCGCY 1 cut(s) 595
BfuAI ACCTGC 1 cut(s) 392
BfuI GTATCC 1 cut(s) 857
BisI GCNGC 9 cut(s) 66, 138, 396, 399, 630, 744, 894, 993, 1092
BlsI GCNGC 9 cut(s) 67, 139, 397, 400, 631, 745, 895, 994, 1093
Bme1390I CCNGG 4 cut(s) 623, 727, 810, 861
Bme18I GGWCC 3 cut(s) 430, 692, 974
BmeRI GACNNNNNGTC 1 cut(s) 698
BmeT110I CYCGRG 1 cut(s) 912
BmgBI CACGTC 1 cut(s) 467
BmgT120I GGNCC 3 cut(s) 430, 692, 974
BmiI GGNNCC 4 cut(s) 136, 431, 432, 604
BmrFI CCNGG 4 cut(s) 623, 727, 810, 861
BmsI GCATC 3 cut(s) 529, 764, 1112
BplI GAGNNNNNCTC 2 cut(s) 895, 927
BpuEI CTTGAG 1 cut(s) 920
BpuMI CCSGG 1 cut(s) 727
BsaJI CCNNGG 1 cut(s) 1212
BsaWI WCCGGW 1 cut(s) 1127
Bsc4I CCNNNNNNNGG 2 cut(s) 612, 866
Bse118I RCCGGY 1 cut(s) 1127
Bse1I ACTGG 3 cut(s) 72, 606, 617
Bse21I CCTNAGG 1 cut(s) 570
Bse3DI GCAATG 4 cut(s) 160, 279, 339, 837
BseBI CCWGG 3 cut(s) 623, 810, 861
BseDI CCNNGG 1 cut(s) 1212
BseGI GGATG 2 cut(s) 10, 722
BseLI CCNNNNNNNGG 2 cut(s) 612, 866
BseMI GCAATG 4 cut(s) 160, 279, 339, 837
BseMII CTCAG 2 cut(s) 561, 837
BseNI ACTGG 3 cut(s) 72, 606, 617
BseRI GAGGAG 2 cut(s) 587, 1088
BseXI GCAGC 7 cut(s) 52, 382, 385, 616, 730, 880, 979
Bsh1236I CGCG 1 cut(s) 489
BshNI GGYRCC 1 cut(s) 134
BshTI ACCGGT 1 cut(s) 1127
BsiHKAI GWGCWC 1 cut(s) 884
BsiHKCI CYCGRG 1 cut(s) 912
BsiSI CCGG 2 cut(s) 727, 1128
BslFI GGGAC 1 cut(s) 416
BslI CCNNNNNNNGG 2 cut(s) 612, 866
BsmAI GTCTC 1 cut(s) 713
BsmFI GGGAC 1 cut(s) 416
BsmI GAATGC 1 cut(s) 335
BsoBI CYCGRG 1 cut(s) 912
Bsp1286I GDGCHC 1 cut(s) 884
Bsp143I GATC 3 cut(s) 281, 602, 1216
BspACI CCGC 4 cut(s) 138, 223, 932, 1092
BspCNI CTCAG 2 cut(s) 562, 838
BspFNI CGCG 1 cut(s) 489
BspLI GGNNCC 4 cut(s) 136, 431, 432, 604
BspMAI CTGCAG 2 cut(s) 403, 1072
BspMI ACCTGC 1 cut(s) 392
BspPI GGATC 4 cut(s) 289, 597, 610, 1224
BspT107I GGYRCC 1 cut(s) 134
BsrDI GCAATG 4 cut(s) 160, 279, 339, 837
BsrFI RCCGGY 1 cut(s) 1127
BsrI ACTGG 3 cut(s) 72, 606, 617
BssAI RCCGGY 1 cut(s) 1127
BssECI CCNNGG 1 cut(s) 1212
BssMI GATC 3 cut(s) 281, 602, 1216
BssSI CACGAG 1 cut(s) 416
BssT1I CCWWGG 1 cut(s) 1212
Bst2BI CACGAG 1 cut(s) 416
Bst2UI CCWGG 3 cut(s) 623, 810, 861
Bst4CI ACNGT 3 cut(s) 619, 869, 1184
Bst6I CTCTTC 2 cut(s) 115, 638
BstAPI GCANNNNNTGC 3 cut(s) 62, 341, 893
BstC8I GCNNGC 4 cut(s) 193, 461, 921, 934
BstDEI CTNAG 4 cut(s) 177, 570, 846, 980
BstF5I GGATG 2 cut(s) 10, 722
BstFNI CGCG 1 cut(s) 489
BstH2I RGCGCY 1 cut(s) 595
BstHHI GCGC 2 cut(s) 594, 898
BstKTI GATC 3 cut(s) 284, 605, 1219
BstMAI GTCTC 1 cut(s) 713
BstMBI GATC 3 cut(s) 281, 602, 1216
BstNI CCWGG 3 cut(s) 623, 810, 861
BstSCI CCNGG 4 cut(s) 621, 725, 808, 859
BstSFI CTRYAG 2 cut(s) 399, 1068
BstUI CGCG 1 cut(s) 489
BstV1I GCAGC 7 cut(s) 52, 382, 385, 616, 730, 880, 979
BstX2I RGATCY 2 cut(s) 281, 602
BstYI RGATCY 2 cut(s) 281, 602
Bsu36I CCTNAGG 1 cut(s) 570
BsuI GTATCC 1 cut(s) 857
BtrI CACGTC 1 cut(s) 467
BtsCI GGATG 2 cut(s) 10, 722
BtsIMutI CAGTG 1 cut(s) 1222
BveI ACCTGC 1 cut(s) 392
Cac8I GCNNGC 4 cut(s) 193, 461, 921, 934
CaiI CAGNNNCTG 2 cut(s) 407, 612
CfoI GCGC 2 cut(s) 594, 898
Cfr10I RCCGGY 1 cut(s) 1127
Cfr13I GGNCC 3 cut(s) 430, 692, 974
CspAI ACCGGT 1 cut(s) 1127
DdeI CTNAG 4 cut(s) 177, 570, 846, 980
DpnI GATC 3 cut(s) 283, 604, 1218
DpnII GATC 3 cut(s) 281, 602, 1216
DriI GACNNNNNGTC 1 cut(s) 698
Eam1104I CTCTTC 2 cut(s) 115, 638
Eam1105I GACNNNNNGTC 1 cut(s) 698
EarI CTCTTC 2 cut(s) 115, 638
Ecl136II GAGCTC 1 cut(s) 882
Eco130I CCWWGG 1 cut(s) 1212
Eco24I GRGCYC 1 cut(s) 884
Eco32I GATATC 1 cut(s) 737
Eco47I GGWCC 3 cut(s) 430, 692, 974
Eco47III AGCGCT 1 cut(s) 593
Eco53kI GAGCTC 1 cut(s) 882
Eco57I CTGAAG 2 cut(s) 654, 803
Eco81I CCTNAGG 1 cut(s) 570
Eco88I CYCGRG 1 cut(s) 912
EcoICRI GAGCTC 1 cut(s) 882
EcoO109I RGGNCCY 1 cut(s) 430
EcoRI GAATTC 1 cut(s) 948
EcoRII CCWGG 3 cut(s) 621, 808, 859
EcoRV GATATC 1 cut(s) 737
EcoT14I CCWWGG 1 cut(s) 1212
EcoT38I GRGCYC 1 cut(s) 884
ErhI CCWWGG 1 cut(s) 1212
FalI AAGNNNNNCTT 6 cut(s) 723, 755, 751, 783, 882, 914
FaqI GGGAC 1 cut(s) 416
FauI CCCGC 1 cut(s) 925
Fnu4HI GCNGC 9 cut(s) 66, 138, 396, 399, 630, 744, 894, 993, 1092
FokI GGATG 2 cut(s) 17, 709
FriOI GRGCYC 1 cut(s) 884
Fsp4HI GCNGC 9 cut(s) 66, 138, 396, 399, 630, 744, 894, 993, 1092
FspBI CTAG 3 cut(s) 285, 392, 1037
GlaI GCGC 2 cut(s) 593, 897
GluI GCNGC 9 cut(s) 66, 138, 396, 399, 630, 744, 894, 993, 1092
HaeII RGCGCY 1 cut(s) 595
HapII CCGG 2 cut(s) 727, 1128
HhaI GCGC 2 cut(s) 594, 898
Hin6I GCGC 2 cut(s) 592, 896
HinP1I GCGC 2 cut(s) 592, 896
HincII GTYRAC 2 cut(s) 958, 1180
HindII GTYRAC 2 cut(s) 958, 1180
HindIII AAGCTT 1 cut(s) 179
HinfI GANTC 3 cut(s) 452, 482, 1008
HpaII CCGG 2 cut(s) 727, 1128
HphI GGTGA 3 cut(s) 589, 1098, 1117
Hpy166II GTNNAC 4 cut(s) 676, 958, 977, 1180
Hpy188I TCNGA 3 cut(s) 321, 847, 1175
Hpy188III TCNNGA 1 cut(s) 569
Hpy8I GTNNAC 4 cut(s) 676, 958, 977, 1180
Hpy99I CGWCG 1 cut(s) 468
HpyCH4III ACNGT 3 cut(s) 619, 869, 1184
HpyCH4IV ACGT 2 cut(s) 466, 1143
HpyF3I CTNAG 4 cut(s) 177, 570, 846, 980
HpySE526I ACGT 2 cut(s) 466, 1143
HspAI GCGC 2 cut(s) 592, 896
KflI GGGWCCC 1 cut(s) 430
Kzo9I GATC 3 cut(s) 281, 602, 1216
LmnI GCTCC 1 cut(s) 225
Lsp1109I GCAGC 7 cut(s) 52, 382, 385, 616, 730, 880, 979
LweI GCATC 3 cut(s) 529, 764, 1112
MaeI CTAG 3 cut(s) 285, 392, 1037
MaeII ACGT 2 cut(s) 466, 1143
MaeIII GTNAC 5 cut(s) 262, 492, 608, 700, 905
MalI GATC 3 cut(s) 283, 604, 1218
MboI GATC 3 cut(s) 281, 602, 1216
MboII GAAGA 4 cut(s) 61, 102, 655, 810
MfeI CAATTG 1 cut(s) 1002
MflI RGATCY 2 cut(s) 281, 602
MhlI GDGCHC 1 cut(s) 884
MluCI AATT 8 cut(s) 10, 312, 411, 801, 855, 948, 1002, 1188
MluI ACGCGT 1 cut(s) 487
MlyI GAGTC 1 cut(s) 461
MmeI TCCRAC 2 cut(s) 696, 1153
MroXI GAANNNNTTC 1 cut(s) 788
MseI TTAA 3 cut(s) 159, 315, 804
MslI CAYNNNNRTG 3 cut(s) 153, 914, 1016
MspA1I CMGCKG 1 cut(s) 223
MspI CCGG 2 cut(s) 727, 1128
MspR9I CCNGG 4 cut(s) 623, 727, 810, 861
MunI CAATTG 1 cut(s) 1002
Mva1269I GAATGC 1 cut(s) 335
MvaI CCWGG 3 cut(s) 623, 810, 861
MvnI CGCG 1 cut(s) 489
NciI CCSGG 1 cut(s) 727
NdeII GATC 3 cut(s) 281, 602, 1216
NlaIV GGNNCC 4 cut(s) 136, 431, 432, 604
NmuCI GTSAC 2 cut(s) 700, 905
OliI CACNNNNGTG 1 cut(s) 914
PaeR7I CTCGAG 1 cut(s) 912
PaqCI CACCTGC 1 cut(s) 392
PctI GAATGC 1 cut(s) 335
PdmI GAANNNNTTC 1 cut(s) 788
PfeI GAWTC 2 cut(s) 482, 1008
PflMI CCANNNNNTGG 1 cut(s) 612
PfoI TCCNGGA 3 cut(s) 621, 725, 859
PinAI ACCGGT 1 cut(s) 1127
PkrI GCNGC 9 cut(s) 67, 139, 397, 400, 631, 745, 895, 994, 1093
PleI GAGTC 1 cut(s) 460
PpsI GAGTC 1 cut(s) 460
PpuMI RGGWCCY 1 cut(s) 430
PshBI ATTAAT 2 cut(s) 315, 804
Psp124BI GAGCTC 1 cut(s) 884
Psp5II RGGWCCY 1 cut(s) 430
Psp6I CCWGG 3 cut(s) 621, 808, 859
PspGI CCWGG 3 cut(s) 621, 808, 859
PspN4I GGNNCC 4 cut(s) 136, 431, 432, 604
PspPI GGNCC 3 cut(s) 430, 692, 974
PspPPI RGGWCCY 1 cut(s) 430
PspXI VCTCGAGB 1 cut(s) 912
PstI CTGCAG 2 cut(s) 403, 1072
PstNI CAGNNNCTG 2 cut(s) 407, 612
PsuI RGATCY 2 cut(s) 281, 602
RseI CAYNNNNRTG 3 cut(s) 153, 914, 1016
SacI GAGCTC 1 cut(s) 884
SaqAI TTAA 3 cut(s) 159, 315, 804
SatI GCNGC 9 cut(s) 66, 138, 396, 399, 630, 744, 894, 993, 1092
Sau3AI GATC 3 cut(s) 281, 602, 1216
Sau96I GGNCC 3 cut(s) 430, 692, 974
SchI GAGTC 1 cut(s) 461
ScrFI CCNGG 4 cut(s) 623, 727, 810, 861
SduI GDGCHC 1 cut(s) 884
SfaNI GCATC 3 cut(s) 529, 764, 1112
SfcI CTRYAG 2 cut(s) 399, 1068
Sfr274I CTCGAG 1 cut(s) 912
SinI GGWCC 3 cut(s) 430, 692, 974
SlaI CTCGAG 1 cut(s) 912
SmiMI CAYNNNNRTG 3 cut(s) 153, 914, 1016
SmlI CTYRAG 2 cut(s) 899, 912
SmoI CTYRAG 2 cut(s) 899, 912
SpeI ACTAGT 1 cut(s) 1036
Sse9I AATT 8 cut(s) 10, 312, 411, 801, 855, 948, 1002, 1188
SsiI CCGC 4 cut(s) 138, 223, 932, 1092
SspMI CTAG 3 cut(s) 285, 392, 1037
SstI GAGCTC 1 cut(s) 884
StyD4I CCNGG 4 cut(s) 621, 725, 808, 859
StyI CCWWGG 1 cut(s) 1212
TaaI ACNGT 3 cut(s) 619, 869, 1184
TaiI ACGT 2 cut(s) 469, 1146
TaqI TCGA 2 cut(s) 185, 913
TasI AATT 8 cut(s) 10, 312, 411, 801, 855, 948, 1002, 1188
TauI GCSGC 2 cut(s) 140, 1094
TfiI GAWTC 2 cut(s) 482, 1008
Tru1I TTAA 3 cut(s) 159, 315, 804
Tru9I TTAA 3 cut(s) 159, 315, 804
TseFI GTSAC 2 cut(s) 700, 905
TseI GCWGC 7 cut(s) 65, 395, 398, 629, 743, 893, 992
Tsp45I GTSAC 2 cut(s) 700, 905
TspDTI ATGAA 6 cut(s) 29, 42, 328, 495, 765, 1000
Van91I CCANNNNNTGG 1 cut(s) 612
VpaK11BI GGWCC 3 cut(s) 430, 692, 974
VspI ATTAAT 2 cut(s) 315, 804
XapI RAATTY 2 cut(s) 411, 948
XcmI CCANNNNNNNNNTGG 1 cut(s) 79
XhoI CTCGAG 1 cut(s) 912
XmnI GAANNNNTTC 1 cut(s) 788
XspI CTAG 3 cut(s) 285, 392, 1037
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.