RLG00000036862

Enoyl- acyl-carrier-protein reductase NADH , chloroplastic-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
85919846 .. 85923392
3547 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000036862

Sequence Viewer

Length: 1218 bp
ATGTGTTTCACTGTTGTTGAAATTTTCTGGGGTTTAAGGCAGATGGCAACTACTGCTGCTTCCAGTCTGCAAATGGCAACAGCAAGACCCTGCATTTCCTCTTCTCATAGAGTTTTCAGGTCTGGTGCCGCTATGCTTCACGGCAATGTTAAAGTGGTATCATCATCTAAGCTCTCGAGTGCGTGCCATATATCATCTGTGCAATCTTTCCAGCGGAGCTTTACATCATCATCTTTGAAAATGGATAAGTTTGTTACAAAGGCAATGGCTGGATCTAGTGAGAACAAGCCCTCTGGGTTGCCAATTAATCTGAAAGGTAAGAGAGCATTCATTGCTGGTGTAGCTGATGATAATGGATATGGGTGGGCTATTGCAAAATCTCTAGCTGCTGCAGGTGCTGAAATTCTTGTGGGAACTTGGGTCCCTGCTTTGAACATTTTTGAGTCCAGCCTGCGACGTGGGAAGTTTGATGAATCACGCGTGTTACCAGATGGTTCTTTGATGGAGATTACTAAAGTTTATCCCCTTGATGCAGTTTTTGATACCCTTGACGATGTTCCTGAGGAGGTGAAATCAAATAAGCGCTATGCTGGATCCAGTAACTGGACTGTCCAGGAAGCTGCTGAAGCCGTGAAGAGTGATTTTGGAAGTATTGACATTCTTGTTCACTCCCTTGCTAATGGACCAGAGGTCACTAAACCTCTGTTGGAGACATCCCGGAAAGGATATCTTGCTGCTATATCTGCATCAAGTTATTCTTATGTTTCATTACTGAAGCATTTCCTCCCAATAATTAATCCAGGTGGTTCTTCACTTTCTCTTACATACATTGCTTCTGAGAGGATAATTCCTGGATACGGTGGAGGTATGAGCTCTGCAAAAGCTGCGCTTGAGAGTGACACTCGGGTGCTTGCTTTTGAAGCGGGCAGAAAAAAGAGAATTCGGGTCAACACAATATCTGCTGGTCCACTAAGAAGCCGTGCTGCCAAAGCAATTGGATTCATTGATATGATGATTGACTATTCGCTAGTCAATGCACCTTTGCAAAAAGAACTATCTGCAGAGGAGGTAGGGAACACAGCCGCTTTCTTGGCATCACCTTTGGCTTCTGCCATCACCGGTTCTGTTATATATGTTGATAATGGCTTGAACACAATGGGCGTTGGAGTTGACAGTCCAATTTTTGAGAAACTTGACATTCCCAAGGATCAGCACTGA

Protein Analysis

406

Amino Acids

43.13

Weight (kDa)

8.92

Isoelectric Point (pI)

41.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
adh_short_C2 PF13561 203 - 384 8.6e-50 Enoyl-(Acyl carrier protein) reductase
adh_short PF00106 203 - 331 4.9e-08 short chain dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 383
Acc36I ACCTGC 1 cut(s) 383
AccB1I GGYRCC 1 cut(s) 125
AccB7I CCANNNNNTGG 1 cut(s) 603
AccII CGCG 1 cut(s) 480
AciI CCGC 4 cut(s) 129, 214, 923, 1083
AclWI GGATC 4 cut(s) 280, 588, 601, 1215
AcsI RAATTY 3 cut(s) 21, 402, 939
AcuI CTGAAG 2 cut(s) 645, 794
AfeI AGCGCT 1 cut(s) 584
AfiI CCNNNNNNNGG 2 cut(s) 603, 857
AflIII ACRYGT 1 cut(s) 478
AgeI ACCGGT 1 cut(s) 1118
AgsI TTSAA 5 cut(s) 20, 238, 433, 920, 1150
AhdI GACNNNNNGTC 1 cut(s) 689
AjiI CACGTC 1 cut(s) 458
AjnI CCWGG 3 cut(s) 612, 799, 850
AleI CACNNNNGTG 1 cut(s) 905
AluBI AGCT 7 cut(s) 172, 219, 344, 386, 620, 873, 884
AluI AGCT 7 cut(s) 172, 219, 344, 386, 620, 873, 884
Alw21I GWGCWC 1 cut(s) 875
Alw26I GTCTC 1 cut(s) 704
AlwI GGATC 4 cut(s) 280, 588, 601, 1215
AlwNI CAGNNNCTG 2 cut(s) 398, 603
Ama87I CYCGRG 2 cut(s) 175, 903
Aor51HI AGCGCT 1 cut(s) 584
ApeKI GCWGC 7 cut(s) 56, 386, 389, 620, 734, 884, 983
ApoI RAATTY 3 cut(s) 21, 402, 939
AseI ATTAAT 2 cut(s) 306, 795
AsiGI ACCGGT 1 cut(s) 1118
Asp700I GAANNNNTTC 1 cut(s) 779
AspLEI GCGC 2 cut(s) 585, 889
AspS9I GGNCC 3 cut(s) 421, 683, 965
AsuC2I CCSGG 1 cut(s) 718
AsuHPI GGTGA 3 cut(s) 580, 1089, 1108
AvaI CYCGRG 2 cut(s) 175, 903
AvaII GGWCC 3 cut(s) 421, 683, 965
AxyI CCTNAGG 1 cut(s) 561
BamHI GGATCC 1 cut(s) 593
BanI GGYRCC 1 cut(s) 125
BanII GRGCYC 1 cut(s) 875
Bbv12I GWGCWC 1 cut(s) 875
BbvI GCAGC 7 cut(s) 43, 373, 376, 607, 721, 871, 970
BccI CCATC 4 cut(s) 37, 485, 496, 1121
BceAI ACGGC 3 cut(s) 157, 614, 963
BciT130I CCWGG 3 cut(s) 614, 801, 852
BciVI GTATCC 1 cut(s) 848
BcnI CCSGG 1 cut(s) 718
BcoDI GTCTC 1 cut(s) 704
BfaI CTAG 3 cut(s) 276, 383, 1028
BfmI CTRYAG 2 cut(s) 390, 1059
BfoI RGCGCY 1 cut(s) 586
BfuAI ACCTGC 1 cut(s) 383
BfuI GTATCC 1 cut(s) 848
BisI GCNGC 9 cut(s) 57, 129, 387, 390, 621, 735, 885, 984, 1083
BlsI GCNGC 9 cut(s) 58, 130, 388, 391, 622, 736, 886, 985, 1084
Bme1390I CCNGG 4 cut(s) 614, 718, 801, 852
Bme18I GGWCC 3 cut(s) 421, 683, 965
BmeRI GACNNNNNGTC 1 cut(s) 689
BmeT110I CYCGRG 2 cut(s) 175, 903
BmgBI CACGTC 1 cut(s) 458
BmgT120I GGNCC 3 cut(s) 421, 683, 965
BmiI GGNNCC 4 cut(s) 127, 422, 423, 595
BmrFI CCNGG 4 cut(s) 614, 718, 801, 852
BmsI GCATC 3 cut(s) 520, 755, 1103
BplI GAGNNNNNCTC 2 cut(s) 886, 918
BpuEI CTTGAG 1 cut(s) 911
BpuMI CCSGG 1 cut(s) 718
BsaJI CCNNGG 1 cut(s) 1203
BsaWI WCCGGW 1 cut(s) 1118
Bsc4I CCNNNNNNNGG 2 cut(s) 603, 857
Bse118I RCCGGY 1 cut(s) 1118
Bse1I ACTGG 3 cut(s) 63, 597, 608
Bse21I CCTNAGG 1 cut(s) 561
Bse3DI GCAATG 4 cut(s) 151, 270, 330, 828
BseBI CCWGG 3 cut(s) 614, 801, 852
BseDI CCNNGG 1 cut(s) 1203
BseGI GGATG 1 cut(s) 713
BseLI CCNNNNNNNGG 2 cut(s) 603, 857
BseMI GCAATG 4 cut(s) 151, 270, 330, 828
BseMII CTCAG 2 cut(s) 552, 828
BseNI ACTGG 3 cut(s) 63, 597, 608
BseRI GAGGAG 2 cut(s) 578, 1079
BseXI GCAGC 7 cut(s) 43, 373, 376, 607, 721, 871, 970
Bsh1236I CGCG 1 cut(s) 480
BshNI GGYRCC 1 cut(s) 125
BshTI ACCGGT 1 cut(s) 1118
BsiHKAI GWGCWC 1 cut(s) 875
BsiHKCI CYCGRG 2 cut(s) 175, 903
BsiSI CCGG 2 cut(s) 718, 1119
BslFI GGGAC 1 cut(s) 407
BslI CCNNNNNNNGG 2 cut(s) 603, 857
BsmAI GTCTC 1 cut(s) 704
BsmFI GGGAC 1 cut(s) 407
BsmI GAATGC 1 cut(s) 326
BsoBI CYCGRG 2 cut(s) 175, 903
Bsp1286I GDGCHC 1 cut(s) 875
Bsp143I GATC 3 cut(s) 272, 593, 1207
BspACI CCGC 4 cut(s) 129, 214, 923, 1083
BspCNI CTCAG 2 cut(s) 553, 829
BspFNI CGCG 1 cut(s) 480
BspLI GGNNCC 4 cut(s) 127, 422, 423, 595
BspMAI CTGCAG 2 cut(s) 394, 1063
BspMI ACCTGC 1 cut(s) 383
BspPI GGATC 4 cut(s) 280, 588, 601, 1215
BspT107I GGYRCC 1 cut(s) 125
BsrDI GCAATG 4 cut(s) 151, 270, 330, 828
BsrFI RCCGGY 1 cut(s) 1118
BsrI ACTGG 3 cut(s) 63, 597, 608
BssAI RCCGGY 1 cut(s) 1118
BssECI CCNNGG 1 cut(s) 1203
BssMI GATC 3 cut(s) 272, 593, 1207
BssT1I CCWWGG 1 cut(s) 1203
Bst2UI CCWGG 3 cut(s) 614, 801, 852
Bst4CI ACNGT 4 cut(s) 13, 610, 860, 1175
Bst6I CTCTTC 2 cut(s) 106, 629
BstAPI GCANNNNNTGC 3 cut(s) 53, 332, 884
BstC8I GCNNGC 4 cut(s) 184, 452, 912, 925
BstDEI CTNAG 4 cut(s) 168, 561, 837, 971
BstF5I GGATG 1 cut(s) 713
BstFNI CGCG 1 cut(s) 480
BstH2I RGCGCY 1 cut(s) 586
BstHHI GCGC 2 cut(s) 585, 889
BstKTI GATC 3 cut(s) 275, 596, 1210
BstMAI GTCTC 1 cut(s) 704
BstMBI GATC 3 cut(s) 272, 593, 1207
BstNI CCWGG 3 cut(s) 614, 801, 852
BstSCI CCNGG 4 cut(s) 612, 716, 799, 850
BstSFI CTRYAG 2 cut(s) 390, 1059
BstUI CGCG 1 cut(s) 480
BstV1I GCAGC 7 cut(s) 43, 373, 376, 607, 721, 871, 970
BstX2I RGATCY 2 cut(s) 272, 593
BstYI RGATCY 2 cut(s) 272, 593
Bsu36I CCTNAGG 1 cut(s) 561
BsuI GTATCC 1 cut(s) 848
BtrI CACGTC 1 cut(s) 458
BtsCI GGATG 1 cut(s) 713
BtsIMutI CAGTG 2 cut(s) 9, 1213
BveI ACCTGC 1 cut(s) 383
Cac8I GCNNGC 4 cut(s) 184, 452, 912, 925
CaiI CAGNNNCTG 2 cut(s) 398, 603
CfoI GCGC 2 cut(s) 585, 889
Cfr10I RCCGGY 1 cut(s) 1118
Cfr13I GGNCC 3 cut(s) 421, 683, 965
CspAI ACCGGT 1 cut(s) 1118
DdeI CTNAG 4 cut(s) 168, 561, 837, 971
DpnI GATC 3 cut(s) 274, 595, 1209
DpnII GATC 3 cut(s) 272, 593, 1207
DriI GACNNNNNGTC 1 cut(s) 689
Eam1104I CTCTTC 2 cut(s) 106, 629
Eam1105I GACNNNNNGTC 1 cut(s) 689
EarI CTCTTC 2 cut(s) 106, 629
Ecl136II GAGCTC 1 cut(s) 873
Eco130I CCWWGG 1 cut(s) 1203
Eco24I GRGCYC 1 cut(s) 875
Eco32I GATATC 1 cut(s) 728
Eco47I GGWCC 3 cut(s) 421, 683, 965
Eco47III AGCGCT 1 cut(s) 584
Eco53kI GAGCTC 1 cut(s) 873
Eco57I CTGAAG 2 cut(s) 645, 794
Eco81I CCTNAGG 1 cut(s) 561
Eco88I CYCGRG 2 cut(s) 175, 903
EcoICRI GAGCTC 1 cut(s) 873
EcoO109I RGGNCCY 1 cut(s) 421
EcoRI GAATTC 1 cut(s) 939
EcoRII CCWGG 3 cut(s) 612, 799, 850
EcoRV GATATC 1 cut(s) 728
EcoT14I CCWWGG 1 cut(s) 1203
EcoT38I GRGCYC 1 cut(s) 875
ErhI CCWWGG 1 cut(s) 1203
FalI AAGNNNNNCTT 6 cut(s) 714, 746, 742, 774, 873, 905
FaqI GGGAC 1 cut(s) 407
FauI CCCGC 1 cut(s) 916
Fnu4HI GCNGC 9 cut(s) 57, 129, 387, 390, 621, 735, 885, 984, 1083
FokI GGATG 1 cut(s) 700
FriOI GRGCYC 1 cut(s) 875
Fsp4HI GCNGC 9 cut(s) 57, 129, 387, 390, 621, 735, 885, 984, 1083
FspBI CTAG 3 cut(s) 276, 383, 1028
GlaI GCGC 2 cut(s) 584, 888
GluI GCNGC 9 cut(s) 57, 129, 387, 390, 621, 735, 885, 984, 1083
HaeII RGCGCY 1 cut(s) 586
HapII CCGG 2 cut(s) 718, 1119
HhaI GCGC 2 cut(s) 585, 889
Hin6I GCGC 2 cut(s) 583, 887
HinP1I GCGC 2 cut(s) 583, 887
HincII GTYRAC 2 cut(s) 949, 1171
HindII GTYRAC 2 cut(s) 949, 1171
HinfI GANTC 3 cut(s) 443, 473, 999
HpaII CCGG 2 cut(s) 718, 1119
HphI GGTGA 3 cut(s) 580, 1089, 1108
Hpy166II GTNNAC 4 cut(s) 667, 949, 968, 1171
Hpy188I TCNGA 2 cut(s) 312, 838
Hpy188III TCNNGA 2 cut(s) 175, 560
Hpy8I GTNNAC 4 cut(s) 667, 949, 968, 1171
Hpy99I CGWCG 1 cut(s) 459
HpyCH4III ACNGT 4 cut(s) 13, 610, 860, 1175
HpyCH4IV ACGT 1 cut(s) 457
HpyF3I CTNAG 4 cut(s) 168, 561, 837, 971
HpySE526I ACGT 1 cut(s) 457
HspAI GCGC 2 cut(s) 583, 887
KflI GGGWCCC 1 cut(s) 421
Kzo9I GATC 3 cut(s) 272, 593, 1207
LmnI GCTCC 1 cut(s) 216
Lsp1109I GCAGC 7 cut(s) 43, 373, 376, 607, 721, 871, 970
LweI GCATC 3 cut(s) 520, 755, 1103
MaeI CTAG 3 cut(s) 276, 383, 1028
MaeII ACGT 1 cut(s) 457
MaeIII GTNAC 5 cut(s) 253, 483, 599, 691, 896
MalI GATC 3 cut(s) 274, 595, 1209
MboI GATC 3 cut(s) 272, 593, 1207
MboII GAAGA 3 cut(s) 93, 646, 801
MfeI CAATTG 1 cut(s) 993
MflI RGATCY 2 cut(s) 272, 593
MhlI GDGCHC 1 cut(s) 875
MluCI AATT 8 cut(s) 21, 303, 402, 792, 846, 939, 993, 1179
MluI ACGCGT 1 cut(s) 478
MlyI GAGTC 1 cut(s) 452
MmeI TCCRAC 2 cut(s) 687, 1144
MroXI GAANNNNTTC 1 cut(s) 779
MseI TTAA 4 cut(s) 35, 150, 306, 795
MslI CAYNNNNRTG 3 cut(s) 144, 905, 1007
MspA1I CMGCKG 1 cut(s) 214
MspI CCGG 2 cut(s) 718, 1119
MspR9I CCNGG 4 cut(s) 614, 718, 801, 852
MunI CAATTG 1 cut(s) 993
Mva1269I GAATGC 1 cut(s) 326
MvaI CCWGG 3 cut(s) 614, 801, 852
MvnI CGCG 1 cut(s) 480
NciI CCSGG 1 cut(s) 718
NdeII GATC 3 cut(s) 272, 593, 1207
NlaIV GGNNCC 4 cut(s) 127, 422, 423, 595
NmuCI GTSAC 2 cut(s) 691, 896
OliI CACNNNNGTG 1 cut(s) 905
PaeR7I CTCGAG 1 cut(s) 175
PaqCI CACCTGC 1 cut(s) 383
PctI GAATGC 1 cut(s) 326
PdmI GAANNNNTTC 1 cut(s) 779
PfeI GAWTC 2 cut(s) 473, 999
PflMI CCANNNNNTGG 1 cut(s) 603
PfoI TCCNGGA 3 cut(s) 612, 716, 850
PinAI ACCGGT 1 cut(s) 1118
PkrI GCNGC 9 cut(s) 58, 130, 388, 391, 622, 736, 886, 985, 1084
PleI GAGTC 1 cut(s) 451
PpsI GAGTC 1 cut(s) 451
PpuMI RGGWCCY 1 cut(s) 421
PshBI ATTAAT 2 cut(s) 306, 795
Psp124BI GAGCTC 1 cut(s) 875
Psp5II RGGWCCY 1 cut(s) 421
Psp6I CCWGG 3 cut(s) 612, 799, 850
PspGI CCWGG 3 cut(s) 612, 799, 850
PspN4I GGNNCC 4 cut(s) 127, 422, 423, 595
PspPI GGNCC 3 cut(s) 421, 683, 965
PspPPI RGGWCCY 1 cut(s) 421
PstI CTGCAG 2 cut(s) 394, 1063
PstNI CAGNNNCTG 2 cut(s) 398, 603
PsuI RGATCY 2 cut(s) 272, 593
RseI CAYNNNNRTG 3 cut(s) 144, 905, 1007
SacI GAGCTC 1 cut(s) 875
SaqAI TTAA 4 cut(s) 35, 150, 306, 795
SatI GCNGC 9 cut(s) 57, 129, 387, 390, 621, 735, 885, 984, 1083
Sau3AI GATC 3 cut(s) 272, 593, 1207
Sau96I GGNCC 3 cut(s) 421, 683, 965
SchI GAGTC 1 cut(s) 452
ScrFI CCNGG 4 cut(s) 614, 718, 801, 852
SduI GDGCHC 1 cut(s) 875
SfaNI GCATC 3 cut(s) 520, 755, 1103
SfcI CTRYAG 2 cut(s) 390, 1059
Sfr274I CTCGAG 1 cut(s) 175
SinI GGWCC 3 cut(s) 421, 683, 965
SlaI CTCGAG 1 cut(s) 175
SmiMI CAYNNNNRTG 3 cut(s) 144, 905, 1007
SmlI CTYRAG 2 cut(s) 175, 890
SmoI CTYRAG 2 cut(s) 175, 890
Sse9I AATT 8 cut(s) 21, 303, 402, 792, 846, 939, 993, 1179
SsiI CCGC 4 cut(s) 129, 214, 923, 1083
SspMI CTAG 3 cut(s) 276, 383, 1028
SstI GAGCTC 1 cut(s) 875
StyD4I CCNGG 4 cut(s) 612, 716, 799, 850
StyI CCWWGG 1 cut(s) 1203
TaaI ACNGT 4 cut(s) 13, 610, 860, 1175
TaiI ACGT 1 cut(s) 460
TaqI TCGA 1 cut(s) 176
TasI AATT 8 cut(s) 21, 303, 402, 792, 846, 939, 993, 1179
TauI GCSGC 2 cut(s) 131, 1085
TfiI GAWTC 2 cut(s) 473, 999
Tru1I TTAA 4 cut(s) 35, 150, 306, 795
Tru9I TTAA 4 cut(s) 35, 150, 306, 795
TscAI CASTG 1 cut(s) 16
TseFI GTSAC 2 cut(s) 691, 896
TseI GCWGC 7 cut(s) 56, 386, 389, 620, 734, 884, 983
Tsp45I GTSAC 2 cut(s) 691, 896
TspDTI ATGAA 4 cut(s) 319, 486, 756, 991
TspRI CASTG 1 cut(s) 16
Van91I CCANNNNNTGG 1 cut(s) 603
VpaK11BI GGWCC 3 cut(s) 421, 683, 965
VspI ATTAAT 2 cut(s) 306, 795
XapI RAATTY 3 cut(s) 21, 402, 939
XcmI CCANNNNNNNNNTGG 1 cut(s) 70
XhoI CTCGAG 1 cut(s) 175
XmnI GAANNNNTTC 1 cut(s) 779
XspI CTAG 3 cut(s) 276, 383, 1028
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.