polyadenylate-binding protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G49600 AT1G49600 AT1G49600 AT3G19130 |
| fragaria_vesca | FvH4_2g06660 FvH4_2g06660 FvH4_2g06660 |
| malus_domestica | MD05G1076000.v1.1 MD10G1090700.v1.1 |
| prunus_persica | Prupe.8G119500_v2.0.a1 Prupe.8G119500_v2.0.a1 |
| pyrus_communis | pycom05g06950 pycom10g07420 |
| rosa_chinensis | RchiOBHm_Chr4g0407821 RchiOBHm_Chr6g0258701 |
| rosa_laevigata | RLG00000014588 |
| rosa_multiflora | Rmu_ssc0000014.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00352380 Rroxscaffold_7G00206030 |
| rosa_rugosa | Rorug04G0081300 Rorug05G0582900 Rorug05G0583000 Rorug05G0583100 |
| rosa_samantha | Rh4AG146600 Rh4BG144100 Rh4CG153100 Rh4DG140600 Rh6BG091100 Rh6DG082700 |
| rosa_wichuraiana | Rw0G022700 Rw6G008630 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 874 |
| Acc16I | TGCGCA | 1 cut(s) | 836 |
| Acc36I | ACCTGC | 1 cut(s) | 874 |
| AccB1I | GGYRCC | 1 cut(s) | 23 |
| AccII | CGCG | 1 cut(s) | 149 |
| AciI | CCGC | 5 cut(s) | 147, 149, 188, 209, 284 |
| AcoI | YGGCCR | 2 cut(s) | 129, 144 |
| AcuI | CTGAAG | 2 cut(s) | 522, 562 |
| AcvI | CACGTG | 1 cut(s) | 491 |
| AfaI | GTAC | 2 cut(s) | 140, 185 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 148, 316 |
| AflIII | ACRYGT | 1 cut(s) | 1279 |
| AgsI | TTSAA | 4 cut(s) | 565, 741, 822, 1224 |
| AluBI | AGCT | 5 cut(s) | 52, 500, 530, 1085, 1322 |
| AluI | AGCT | 5 cut(s) | 52, 500, 530, 1085, 1322 |
| Alw21I | GWGCWC | 2 cut(s) | 532, 1246 |
| Alw26I | GTCTC | 3 cut(s) | 371, 665, 1063 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 52, 1141 |
| AoxI | GGCC | 6 cut(s) | 3, 129, 144, 320, 789, 828 |
| ApaI | GGGCCC | 1 cut(s) | 324 |
| AspLEI | GCGC | 1 cut(s) | 837 |
| AspS9I | GGNCC | 7 cut(s) | 4, 320, 321, 339, 789, 828, 948 |
| AsuC2I | CCSGG | 1 cut(s) | 143 |
| AsuHPI | GGTGA | 5 cut(s) | 221, 599, 779, 855, 1061 |
| AvaII | GGWCC | 2 cut(s) | 339, 948 |
| AxyI | CCTNAGG | 1 cut(s) | 255 |
| BaeGI | GKGCMC | 2 cut(s) | 38, 324 |
| BalI | TGGCCA | 1 cut(s) | 131 |
| BanI | GGYRCC | 1 cut(s) | 23 |
| BanII | GRGCYC | 3 cut(s) | 324, 532, 969 |
| BbrPI | CACGTG | 1 cut(s) | 491 |
| BbsI | GAAGAC | 1 cut(s) | 1026 |
| Bbv12I | GWGCWC | 2 cut(s) | 532, 1246 |
| BccI | CCATC | 6 cut(s) | 121, 148, 172, 228, 350, 364 |
| BceAI | ACGGC | 2 cut(s) | 289, 920 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 539, 573, 1154, 1188 |
| BciVI | GTATCC | 1 cut(s) | 458 |
| BcnI | CCSGG | 1 cut(s) | 143 |
| BcoDI | GTCTC | 3 cut(s) | 371, 665, 1063 |
| BfaI | CTAG | 3 cut(s) | 606, 681, 719 |
| BfmI | CTRYAG | 3 cut(s) | 642, 1317, 1323 |
| BfuAI | ACCTGC | 1 cut(s) | 874 |
| BfuI | GTATCC | 1 cut(s) | 458 |
| Bme1390I | CCNGG | 1 cut(s) | 143 |
| Bme18I | GGWCC | 2 cut(s) | 339, 948 |
| BmgT120I | GGNCC | 7 cut(s) | 4, 320, 321, 339, 789, 828, 948 |
| BmiI | GGNNCC | 5 cut(s) | 25, 321, 322, 949, 950 |
| BmrFI | CCNGG | 1 cut(s) | 143 |
| BmrI | ACTGGG | 2 cut(s) | 577, 946 |
| BmsI | GCATC | 8 cut(s) | 90, 153, 286, 383, 712, 932, 1108, 1128 |
| BmuI | ACTGGG | 2 cut(s) | 577, 946 |
| BpiI | GAAGAC | 1 cut(s) | 1026 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1304 |
| BpuMI | CCSGG | 1 cut(s) | 143 |
| BsaAI | YACGTR | 1 cut(s) | 491 |
| BsaBI | GATNNNNATC | 1 cut(s) | 691 |
| BsaJI | CCNNGG | 3 cut(s) | 147, 327, 943 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 696, 726 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 148, 316 |
| Bse1I | ACTGG | 7 cut(s) | 412, 454, 572, 736, 952, 1073, 1231 |
| Bse21I | CCTNAGG | 1 cut(s) | 255 |
| Bse3DI | GCAATG | 2 cut(s) | 128, 792 |
| Bse8I | GATNNNNATC | 1 cut(s) | 691 |
| BseDI | CCNNGG | 3 cut(s) | 147, 327, 943 |
| BseGI | GGATG | 6 cut(s) | 105, 132, 223, 375, 398, 1123 |
| BseJI | GATNNNNATC | 1 cut(s) | 691 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 148, 316 |
| BseMI | GCAATG | 2 cut(s) | 128, 792 |
| BseMII | CTCAG | 6 cut(s) | 53, 269, 435, 996, 1113, 1295 |
| BseNI | ACTGG | 7 cut(s) | 412, 454, 572, 736, 952, 1073, 1231 |
| BseRI | GAGGAG | 1 cut(s) | 344 |
| BseSI | GKGCMC | 2 cut(s) | 38, 324 |
| BseX3I | CGGCCG | 1 cut(s) | 144 |
| BseYI | CCCAGC | 1 cut(s) | 6 |
| Bsh1236I | CGCG | 1 cut(s) | 149 |
| Bsh1285I | CGRYCG | 1 cut(s) | 147 |
| BshFI | GGCC | 6 cut(s) | 5, 131, 146, 322, 791, 830 |
| BshNI | GGYRCC | 1 cut(s) | 23 |
| BsiEI | CGRYCG | 1 cut(s) | 147 |
| BsiHKAI | GWGCWC | 2 cut(s) | 532, 1246 |
| BsiSI | CCGG | 2 cut(s) | 143, 1027 |
| BslFI | GGGAC | 2 cut(s) | 292, 934 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 148, 316 |
| BsmAI | GTCTC | 3 cut(s) | 371, 665, 1063 |
| BsmFI | GGGAC | 2 cut(s) | 292, 934 |
| BsmI | GAATGC | 1 cut(s) | 298 |
| BsnI | GGCC | 6 cut(s) | 5, 131, 146, 322, 791, 830 |
| Bsp120I | GGGCCC | 1 cut(s) | 320 |
| Bsp1286I | GDGCHC | 5 cut(s) | 38, 324, 532, 969, 1246 |
| Bsp143I | GATC | 2 cut(s) | 28, 613 |
| BspACI | CCGC | 5 cut(s) | 147, 149, 188, 209, 284 |
| BspANI | GGCC | 6 cut(s) | 5, 131, 146, 322, 791, 830 |
| BspCNI | CTCAG | 6 cut(s) | 52, 268, 434, 997, 1114, 1296 |
| BspFNI | CGCG | 1 cut(s) | 149 |
| BspLI | GGNNCC | 5 cut(s) | 25, 321, 322, 949, 950 |
| BspMAI | CTGCAG | 2 cut(s) | 1321, 1327 |
| BspMI | ACCTGC | 1 cut(s) | 874 |
| BspT107I | GGYRCC | 1 cut(s) | 23 |
| BsrDI | GCAATG | 2 cut(s) | 128, 792 |
| BsrI | ACTGG | 7 cut(s) | 412, 454, 572, 736, 952, 1073, 1231 |
| BssECI | CCNNGG | 3 cut(s) | 147, 327, 943 |
| BssMI | GATC | 2 cut(s) | 28, 613 |
| BssT1I | CCWWGG | 1 cut(s) | 943 |
| Bst4CI | ACNGT | 5 cut(s) | 521, 882, 962, 1153, 1171 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 52, 199 |
| BstBAI | YACGTR | 1 cut(s) | 491 |
| BstC8I | GCNNGC | 2 cut(s) | 1163, 1310 |
| BstDEI | CTNAG | 6 cut(s) | 39, 255, 421, 1005, 1122, 1304 |
| BstDSI | CCRYGG | 1 cut(s) | 147 |
| BstF5I | GGATG | 6 cut(s) | 105, 132, 223, 375, 398, 1123 |
| BstFNI | CGCG | 1 cut(s) | 149 |
| BstHHI | GCGC | 1 cut(s) | 837 |
| BstKTI | GATC | 2 cut(s) | 31, 616 |
| BstMAI | GTCTC | 3 cut(s) | 371, 665, 1063 |
| BstMBI | GATC | 2 cut(s) | 28, 613 |
| BstMCI | CGRYCG | 1 cut(s) | 147 |
| BstNSI | RCATGY | 4 cut(s) | 202, 923, 1283, 1312 |
| BstSCI | CCNGG | 1 cut(s) | 141 |
| BstSFI | CTRYAG | 3 cut(s) | 642, 1317, 1323 |
| BstSLI | GKGCMC | 2 cut(s) | 38, 324 |
| BstUI | CGCG | 1 cut(s) | 149 |
| BstV2I | GAAGAC | 1 cut(s) | 1026 |
| BstZI | CGGCCG | 1 cut(s) | 144 |
| Bsu36I | CCTNAGG | 1 cut(s) | 255 |
| BsuI | GTATCC | 1 cut(s) | 458 |
| BsuRI | GGCC | 6 cut(s) | 5, 131, 146, 322, 791, 830 |
| BtgI | CCRYGG | 1 cut(s) | 147 |
| BtgZI | GCGATG | 2 cut(s) | 167, 173 |
| BtsCI | GGATG | 6 cut(s) | 105, 132, 223, 375, 398, 1123 |
| BtsI | GCAGTG | 2 cut(s) | 1214, 1314 |
| BtsIMutI | CAGTG | 6 cut(s) | 405, 586, 967, 1214, 1238, 1314 |
| BveI | ACCTGC | 1 cut(s) | 874 |
| Cac8I | GCNNGC | 2 cut(s) | 1163, 1310 |
| CaiI | CAGNNNCTG | 2 cut(s) | 52, 1141 |
| CfoI | GCGC | 1 cut(s) | 837 |
| Cfr13I | GGNCC | 7 cut(s) | 4, 320, 321, 339, 789, 828, 948 |
| Cfr42I | CCGCGG | 1 cut(s) | 150 |
| Csp6I | GTAC | 2 cut(s) | 139, 184 |
| CviAII | CATG | 7 cut(s) | 133, 199, 535, 832, 920, 1280, 1309 |
| CviQI | GTAC | 2 cut(s) | 139, 184 |
| DdeI | CTNAG | 6 cut(s) | 39, 255, 421, 1005, 1122, 1304 |
| DpnI | GATC | 2 cut(s) | 30, 615 |
| DpnII | GATC | 2 cut(s) | 28, 613 |
| EaeI | YGGCCR | 2 cut(s) | 129, 144 |
| EagI | CGGCCG | 1 cut(s) | 144 |
| Ecl136II | GAGCTC | 1 cut(s) | 530 |
| EclXI | CGGCCG | 1 cut(s) | 144 |
| Eco130I | CCWWGG | 1 cut(s) | 943 |
| Eco24I | GRGCYC | 3 cut(s) | 324, 532, 969 |
| Eco47I | GGWCC | 2 cut(s) | 339, 948 |
| Eco52I | CGGCCG | 1 cut(s) | 144 |
| Eco53kI | GAGCTC | 1 cut(s) | 530 |
| Eco57I | CTGAAG | 2 cut(s) | 522, 562 |
| Eco72I | CACGTG | 1 cut(s) | 491 |
| Eco81I | CCTNAGG | 1 cut(s) | 255 |
| EcoICRI | GAGCTC | 1 cut(s) | 530 |
| EcoO109I | RGGNCCY | 2 cut(s) | 320, 948 |
| EcoT14I | CCWWGG | 1 cut(s) | 943 |
| EcoT22I | ATGCAT | 1 cut(s) | 925 |
| EcoT38I | GRGCYC | 3 cut(s) | 324, 532, 969 |
| ErhI | CCWWGG | 1 cut(s) | 943 |
| FaeI | CATG | 7 cut(s) | 136, 202, 538, 835, 923, 1283, 1312 |
| FaqI | GGGAC | 2 cut(s) | 292, 934 |
| FatI | CATG | 7 cut(s) | 132, 198, 534, 831, 919, 1279, 1308 |
| FauI | CCCGC | 1 cut(s) | 195 |
| FauNDI | CATATG | 1 cut(s) | 205 |
| FokI | GGATG | 6 cut(s) | 112, 139, 210, 382, 405, 1130 |
| FriOI | GRGCYC | 3 cut(s) | 324, 532, 969 |
| FspAI | RTGCGCAY | 1 cut(s) | 836 |
| FspBI | CTAG | 3 cut(s) | 606, 681, 719 |
| FspI | TGCGCA | 1 cut(s) | 836 |
| GlaI | GCGC | 1 cut(s) | 836 |
| GsaI | CCCAGC | 1 cut(s) | 10 |
| HaeIII | GGCC | 6 cut(s) | 5, 131, 146, 322, 791, 830 |
| HapII | CCGG | 2 cut(s) | 143, 1027 |
| HhaI | GCGC | 1 cut(s) | 837 |
| Hin1II | CATG | 7 cut(s) | 136, 202, 538, 835, 923, 1283, 1312 |
| Hin6I | GCGC | 1 cut(s) | 835 |
| HinP1I | GCGC | 1 cut(s) | 835 |
| HincII | GTYRAC | 1 cut(s) | 1330 |
| HindII | GTYRAC | 1 cut(s) | 1330 |
| HindIII | AAGCTT | 1 cut(s) | 1083 |
| HinfI | GANTC | 3 cut(s) | 214, 1001, 1220 |
| HpaI | GTTAAC | 1 cut(s) | 1330 |
| HpaII | CCGG | 2 cut(s) | 143, 1027 |
| HphI | GGTGA | 5 cut(s) | 221, 599, 779, 855, 1061 |
| Hpy166II | GTNNAC | 3 cut(s) | 184, 917, 1330 |
| Hpy188I | TCNGA | 4 cut(s) | 460, 613, 1006, 1219 |
| Hpy188III | TCNNGA | 3 cut(s) | 337, 719, 1298 |
| Hpy8I | GTNNAC | 3 cut(s) | 184, 917, 1330 |
| Hpy99I | CGWCG | 1 cut(s) | 941 |
| HpyAV | CCTTC | 4 cut(s) | 368, 395, 586, 1108 |
| HpyCH4III | ACNGT | 5 cut(s) | 521, 882, 962, 1153, 1171 |
| HpyCH4IV | ACGT | 2 cut(s) | 490, 736 |
| HpyF3I | CTNAG | 6 cut(s) | 39, 255, 421, 1005, 1122, 1304 |
| HpySE526I | ACGT | 2 cut(s) | 490, 736 |
| Hsp92II | CATG | 7 cut(s) | 136, 202, 538, 835, 923, 1283, 1312 |
| HspAI | GCGC | 1 cut(s) | 835 |
| KflI | GGGWCCC | 1 cut(s) | 948 |
| KspAI | GTTAAC | 1 cut(s) | 1330 |
| KspI | CCGCGG | 1 cut(s) | 150 |
| Kzo9I | GATC | 2 cut(s) | 28, 613 |
| LmnI | GCTCC | 4 cut(s) | 527, 535, 704, 1241 |
| LweI | GCATC | 8 cut(s) | 90, 153, 286, 383, 712, 932, 1108, 1128 |
| MaeI | CTAG | 3 cut(s) | 606, 681, 719 |
| MaeII | ACGT | 2 cut(s) | 490, 736 |
| MaeIII | GTNAC | 3 cut(s) | 521, 649, 1226 |
| MalI | GATC | 2 cut(s) | 30, 615 |
| MboI | GATC | 2 cut(s) | 28, 613 |
| MboII | GAAGA | 3 cut(s) | 515, 879, 1031 |
| MhlI | GDGCHC | 5 cut(s) | 38, 324, 532, 969, 1246 |
| MlsI | TGGCCA | 1 cut(s) | 131 |
| MluNI | TGGCCA | 1 cut(s) | 131 |
| MlyI | GAGTC | 1 cut(s) | 208 |
| MmeI | TCCRAC | 3 cut(s) | 970, 1057, 1197 |
| Mox20I | TGGCCA | 1 cut(s) | 131 |
| Mph1103I | ATGCAT | 1 cut(s) | 925 |
| MscI | TGGCCA | 1 cut(s) | 131 |
| MseI | TTAA | 3 cut(s) | 699, 1329, 1342 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1047 |
| Msp20I | TGGCCA | 1 cut(s) | 131 |
| MspA1I | CMGCKG | 3 cut(s) | 52, 149, 1322 |
| MspI | CCGG | 2 cut(s) | 143, 1027 |
| MspR9I | CCNGG | 1 cut(s) | 143 |
| Mva1269I | GAATGC | 1 cut(s) | 298 |
| MvnI | CGCG | 1 cut(s) | 149 |
| NciI | CCSGG | 1 cut(s) | 143 |
| NdeI | CATATG | 1 cut(s) | 205 |
| NdeII | GATC | 2 cut(s) | 28, 613 |
| NlaIII | CATG | 7 cut(s) | 136, 202, 538, 835, 923, 1283, 1312 |
| NlaIV | GGNNCC | 5 cut(s) | 25, 321, 322, 949, 950 |
| NmuCI | GTSAC | 1 cut(s) | 649 |
| NsbI | TGCGCA | 1 cut(s) | 836 |
| NsiI | ATGCAT | 1 cut(s) | 925 |
| NspI | RCATGY | 4 cut(s) | 202, 923, 1283, 1312 |
| PaeI | GCATGC | 1 cut(s) | 1312 |
| PaqCI | CACCTGC | 1 cut(s) | 874 |
| PciI | ACATGT | 1 cut(s) | 1279 |
| PctI | GAATGC | 1 cut(s) | 298 |
| PfeI | GAWTC | 2 cut(s) | 1001, 1220 |
| PleI | GAGTC | 1 cut(s) | 208 |
| PmaCI | CACGTG | 1 cut(s) | 491 |
| PmlI | CACGTG | 1 cut(s) | 491 |
| PpsI | GAGTC | 1 cut(s) | 208 |
| Ppu21I | YACGTR | 1 cut(s) | 491 |
| PpuMI | RGGWCCY | 1 cut(s) | 948 |
| PscI | ACATGT | 1 cut(s) | 1279 |
| Psp124BI | GAGCTC | 1 cut(s) | 532 |
| Psp5II | RGGWCCY | 1 cut(s) | 948 |
| PspCI | CACGTG | 1 cut(s) | 491 |
| PspFI | CCCAGC | 1 cut(s) | 6 |
| PspN4I | GGNNCC | 5 cut(s) | 25, 321, 322, 949, 950 |
| PspOMI | GGGCCC | 1 cut(s) | 320 |
| PspPI | GGNCC | 7 cut(s) | 4, 320, 321, 339, 789, 828, 948 |
| PspPPI | RGGWCCY | 1 cut(s) | 948 |
| PstI | CTGCAG | 2 cut(s) | 1321, 1327 |
| PstNI | CAGNNNCTG | 2 cut(s) | 52, 1141 |
| PvuII | CAGCTG | 2 cut(s) | 52, 1322 |
| RsaI | GTAC | 2 cut(s) | 140, 185 |
| RsaNI | GTAC | 2 cut(s) | 139, 184 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1047 |
| SacI | GAGCTC | 1 cut(s) | 532 |
| SacII | CCGCGG | 1 cut(s) | 150 |
| SaqAI | TTAA | 3 cut(s) | 699, 1329, 1342 |
| Sau3AI | GATC | 2 cut(s) | 28, 613 |
| Sau96I | GGNCC | 7 cut(s) | 4, 320, 321, 339, 789, 828, 948 |
| SchI | GAGTC | 1 cut(s) | 208 |
| ScrFI | CCNGG | 1 cut(s) | 143 |
| SduI | GDGCHC | 5 cut(s) | 38, 324, 532, 969, 1246 |
| SfaNI | GCATC | 8 cut(s) | 90, 153, 286, 383, 712, 932, 1108, 1128 |
| SfcI | CTRYAG | 3 cut(s) | 642, 1317, 1323 |
| Sfr303I | CCGCGG | 1 cut(s) | 150 |
| SgrBI | CCGCGG | 1 cut(s) | 150 |
| SinI | GGWCC | 2 cut(s) | 339, 948 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1047 |
| SphI | GCATGC | 1 cut(s) | 1312 |
| SsiI | CCGC | 5 cut(s) | 147, 149, 188, 209, 284 |
| SspMI | CTAG | 3 cut(s) | 606, 681, 719 |
| SstI | GAGCTC | 1 cut(s) | 532 |
| StyD4I | CCNGG | 1 cut(s) | 141 |
| StyI | CCWWGG | 1 cut(s) | 943 |
| TaaI | ACNGT | 5 cut(s) | 521, 882, 962, 1153, 1171 |
| TaiI | ACGT | 2 cut(s) | 493, 739 |
| TaqI | TCGA | 1 cut(s) | 1174 |
| TauI | GCSGC | 4 cut(s) | 149, 152, 212, 286 |
| TfiI | GAWTC | 2 cut(s) | 1001, 1220 |
| Tru1I | TTAA | 3 cut(s) | 699, 1329, 1342 |
| Tru9I | TTAA | 3 cut(s) | 699, 1329, 1342 |
| TscAI | CASTG | 6 cut(s) | 412, 586, 967, 1214, 1238, 1321 |
| TseFI | GTSAC | 1 cut(s) | 649 |
| Tsp45I | GTSAC | 1 cut(s) | 649 |
| TspDTI | ATGAA | 5 cut(s) | 350, 681, 786, 818, 1032 |
| TspGWI | ACGGA | 4 cut(s) | 405, 483, 540, 1254 |
| TspRI | CASTG | 6 cut(s) | 412, 586, 967, 1214, 1238, 1321 |
| VpaK11BI | GGWCC | 2 cut(s) | 339, 948 |
| XbaI | TCTAGA | 1 cut(s) | 718 |
| XceI | RCATGY | 4 cut(s) | 202, 923, 1283, 1312 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 14 |
| XspI | CTAG | 3 cut(s) | 606, 681, 719 |
| Zsp2I | ATGCAT | 1 cut(s) | 925 |