polyadenylate-binding protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G49600 AT1G49600 AT1G49600 AT3G19130 |
| fragaria_vesca | FvH4_2g06660 FvH4_2g06660 FvH4_2g06660 |
| malus_domestica | MD05G1076000.v1.1 MD10G1090700.v1.1 |
| prunus_persica | Prupe.8G119500_v2.0.a1 Prupe.8G119500_v2.0.a1 |
| pyrus_communis | pycom05g06950 pycom10g07420 |
| rosa_chinensis | RchiOBHm_Chr4g0407821 RchiOBHm_Chr6g0258701 |
| rosa_laevigata | RLG00000014588 |
| rosa_multiflora | Rmu_ssc0000014.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00352380 Rroxscaffold_7G00206030 |
| rosa_rugosa | Rorug04G0081300 Rorug05G0582900 Rorug05G0583000 Rorug05G0583100 |
| rosa_samantha | Rh4AG146600 Rh4BG144100 Rh4CG153100 Rh4DG140600 Rh6BG091100 Rh6DG082700 |
| rosa_wichuraiana | Rw0G022700 Rw6G008630 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 372 |
| AccB1I | GGYRCC | 1 cut(s) | 938 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 376 |
| AccBSI | CCGCTC | 1 cut(s) | 280 |
| AccII | CGCG | 1 cut(s) | 209 |
| AcoI | YGGCCR | 2 cut(s) | 144, 415 |
| AcuI | CTGAAG | 1 cut(s) | 411 |
| AcvI | CACGTG | 1 cut(s) | 497 |
| AfaI | GTAC | 5 cut(s) | 134, 179, 535, 890, 1283 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 142, 376 |
| AgeI | ACCGGT | 2 cut(s) | 737, 1078 |
| AgsI | TTSAA | 2 cut(s) | 725, 747 |
| AhlI | ACTAGT | 1 cut(s) | 611 |
| AjnI | CCWGG | 1 cut(s) | 417 |
| AluBI | AGCT | 3 cut(s) | 506, 647, 1331 |
| AluI | AGCT | 3 cut(s) | 506, 647, 1331 |
| Alw21I | GWGCWC | 1 cut(s) | 41 |
| Alw26I | GTCTC | 3 cut(s) | 309, 427, 1069 |
| AoxI | GGCC | 9 cut(s) | 3, 51, 144, 243, 258, 326, 415, 795, 833 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1165, 1197 |
| AsiGI | ACCGGT | 2 cut(s) | 737, 1078 |
| AspLEI | GCGC | 2 cut(s) | 211, 1297 |
| AspS9I | GGNCC | 5 cut(s) | 4, 52, 326, 345, 834 |
| AsuC2I | CCSGG | 1 cut(s) | 137 |
| AsuHPI | GGTGA | 2 cut(s) | 605, 1067 |
| AvaII | GGWCC | 1 cut(s) | 345 |
| AxyI | CCTNAGG | 1 cut(s) | 1031 |
| BanI | GGYRCC | 1 cut(s) | 938 |
| BanII | GRGCYC | 1 cut(s) | 975 |
| BbrPI | CACGTG | 1 cut(s) | 497 |
| BbsI | GAAGAC | 2 cut(s) | 1032, 1338 |
| Bbv12I | GWGCWC | 1 cut(s) | 41 |
| BbvCI | CCTCAGC | 1 cut(s) | 507 |
| BccI | CCATC | 6 cut(s) | 115, 166, 316, 356, 370, 959 |
| BceAI | ACGGC | 3 cut(s) | 34, 239, 1024 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 545, 579, 1160, 1194 |
| BciT130I | CCWGG | 1 cut(s) | 419 |
| BcnI | CCSGG | 1 cut(s) | 137 |
| BcoDI | GTCTC | 3 cut(s) | 309, 427, 1069 |
| BcuI | ACTAGT | 1 cut(s) | 611 |
| BfaI | CTAG | 2 cut(s) | 612, 687 |
| BfmI | CTRYAG | 3 cut(s) | 518, 648, 1326 |
| BfuAI | ACCTGC | 1 cut(s) | 372 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 257 |
| BglII | AGATCT | 1 cut(s) | 1309 |
| BmcAI | AGTACT | 1 cut(s) | 890 |
| Bme1390I | CCNGG | 2 cut(s) | 137, 419 |
| Bme18I | GGWCC | 1 cut(s) | 345 |
| BmgT120I | GGNCC | 5 cut(s) | 4, 52, 326, 345, 834 |
| BmiI | GGNNCC | 2 cut(s) | 327, 940 |
| BmrFI | CCNGG | 2 cut(s) | 137, 419 |
| BmrI | ACTGGG | 1 cut(s) | 583 |
| BmsI | GCATC | 8 cut(s) | 87, 109, 117, 147, 220, 226, 718, 1114 |
| BmuI | ACTGGG | 1 cut(s) | 583 |
| BpiI | GAAGAC | 2 cut(s) | 1032, 1338 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 28, 60 |
| BpmI | CTGGAG | 1 cut(s) | 936 |
| Bpu10I | CCTNAGC | 2 cut(s) | 240, 507 |
| BpuEI | CTTGAG | 2 cut(s) | 266, 1213 |
| BpuMI | CCSGG | 1 cut(s) | 137 |
| BsaAI | YACGTR | 1 cut(s) | 497 |
| BsaBI | GATNNNNATC | 1 cut(s) | 697 |
| BsaI | GGTCTC | 1 cut(s) | 427 |
| BsaJI | CCNNGG | 3 cut(s) | 147, 255, 949 |
| BsaWI | WCCGGW | 2 cut(s) | 737, 1078 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 142, 376 |
| Bse118I | RCCGGY | 3 cut(s) | 413, 737, 1078 |
| Bse1I | ACTGG | 2 cut(s) | 578, 1237 |
| Bse21I | CCTNAGG | 1 cut(s) | 1031 |
| Bse3DI | GCAATG | 3 cut(s) | 122, 942, 1143 |
| Bse8I | GATNNNNATC | 1 cut(s) | 697 |
| BseBI | CCWGG | 1 cut(s) | 419 |
| BseDI | CCNNGG | 3 cut(s) | 147, 255, 949 |
| BseGI | GGATG | 6 cut(s) | 102, 126, 211, 381, 781, 1129 |
| BseJI | GATNNNNATC | 1 cut(s) | 697 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 142, 376 |
| BseMI | GCAATG | 3 cut(s) | 122, 942, 1143 |
| BseMII | CTCAG | 8 cut(s) | 26, 254, 320, 498, 971, 1045, 1119, 1304 |
| BseNI | ACTGG | 2 cut(s) | 578, 1237 |
| BseYI | CCCAGC | 1 cut(s) | 54 |
| BsgI | GTGCAG | 1 cut(s) | 350 |
| Bsh1236I | CGCG | 1 cut(s) | 209 |
| Bsh1285I | CGRYCG | 1 cut(s) | 742 |
| BshFI | GGCC | 9 cut(s) | 5, 53, 146, 245, 260, 328, 417, 797, 835 |
| BshNI | GGYRCC | 1 cut(s) | 938 |
| BshTI | ACCGGT | 2 cut(s) | 737, 1078 |
| BsiEI | CGRYCG | 1 cut(s) | 742 |
| BsiHKAI | GWGCWC | 1 cut(s) | 41 |
| BsiSI | CCGG | 4 cut(s) | 137, 414, 738, 1079 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 142, 376 |
| BsmAI | GTCTC | 3 cut(s) | 309, 427, 1069 |
| BsmI | GAATGC | 2 cut(s) | 1138, 1156 |
| BsnI | GGCC | 9 cut(s) | 5, 53, 146, 245, 260, 328, 417, 797, 835 |
| Bso31I | GGTCTC | 1 cut(s) | 427 |
| Bsp1286I | GDGCHC | 2 cut(s) | 41, 975 |
| Bsp143I | GATC | 4 cut(s) | 31, 619, 1220, 1309 |
| Bsp19I | CCATGG | 1 cut(s) | 147 |
| BspANI | GGCC | 9 cut(s) | 5, 53, 146, 245, 260, 328, 417, 797, 835 |
| BspCNI | CTCAG | 8 cut(s) | 27, 253, 319, 499, 970, 1044, 1120, 1305 |
| BspFNI | CGCG | 1 cut(s) | 209 |
| BspLI | GGNNCC | 2 cut(s) | 327, 940 |
| BspMAI | CTGCAG | 2 cut(s) | 522, 1330 |
| BspMI | ACCTGC | 1 cut(s) | 372 |
| BspT107I | GGYRCC | 1 cut(s) | 938 |
| BspTNI | GGTCTC | 1 cut(s) | 427 |
| BsrBI | CCGCTC | 1 cut(s) | 280 |
| BsrDI | GCAATG | 3 cut(s) | 122, 942, 1143 |
| BsrFI | RCCGGY | 3 cut(s) | 413, 737, 1078 |
| BsrI | ACTGG | 2 cut(s) | 578, 1237 |
| BssAI | RCCGGY | 3 cut(s) | 413, 737, 1078 |
| BssECI | CCNNGG | 3 cut(s) | 147, 255, 949 |
| BssMI | GATC | 4 cut(s) | 31, 619, 1220, 1309 |
| BssT1I | CCWWGG | 2 cut(s) | 147, 949 |
| Bst2UI | CCWGG | 1 cut(s) | 419 |
| Bst4CI | ACNGT | 3 cut(s) | 888, 1159, 1177 |
| Bst6I | CTCTTC | 2 cut(s) | 430, 898 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 97, 193, 938, 1292 |
| BstBAI | YACGTR | 1 cut(s) | 497 |
| BstC8I | GCNNGC | 6 cut(s) | 237, 358, 833, 971, 1093, 1323 |
| BstDEI | CTNAG | 8 cut(s) | 35, 240, 306, 507, 957, 1031, 1128, 1313 |
| BstDSI | CCRYGG | 2 cut(s) | 147, 255 |
| BstF5I | GGATG | 6 cut(s) | 102, 126, 211, 381, 781, 1129 |
| BstFNI | CGCG | 1 cut(s) | 209 |
| BstHHI | GCGC | 2 cut(s) | 211, 1297 |
| BstKTI | GATC | 4 cut(s) | 34, 622, 1223, 1312 |
| BstMAI | GTCTC | 3 cut(s) | 309, 427, 1069 |
| BstMBI | GATC | 4 cut(s) | 31, 619, 1220, 1309 |
| BstMCI | CGRYCG | 1 cut(s) | 742 |
| BstNI | CCWGG | 1 cut(s) | 419 |
| BstNSI | RCATGY | 4 cut(s) | 196, 932, 1095, 1325 |
| BstSCI | CCNGG | 2 cut(s) | 135, 417 |
| BstSFI | CTRYAG | 3 cut(s) | 518, 648, 1326 |
| BstUI | CGCG | 1 cut(s) | 209 |
| BstV2I | GAAGAC | 2 cut(s) | 1032, 1338 |
| BstX2I | RGATCY | 1 cut(s) | 1309 |
| BstYI | RGATCY | 1 cut(s) | 1309 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1031 |
| BsuRI | GGCC | 9 cut(s) | 5, 53, 146, 245, 260, 328, 417, 797, 835 |
| BtgI | CCRYGG | 2 cut(s) | 147, 255 |
| BtgZI | GCGATG | 2 cut(s) | 140, 167 |
| BtsCI | GGATG | 6 cut(s) | 102, 126, 211, 381, 781, 1129 |
| BtsI | GCAGTG | 3 cut(s) | 31, 98, 1220 |
| BtsIMutI | CAGTG | 4 cut(s) | 31, 98, 1220, 1244 |
| BveI | ACCTGC | 1 cut(s) | 372 |
| Cac8I | GCNNGC | 6 cut(s) | 237, 358, 833, 971, 1093, 1323 |
| CfoI | GCGC | 2 cut(s) | 211, 1297 |
| Cfr10I | RCCGGY | 3 cut(s) | 413, 737, 1078 |
| Cfr13I | GGNCC | 5 cut(s) | 4, 52, 326, 345, 834 |
| Csp6I | GTAC | 5 cut(s) | 133, 178, 534, 889, 1282 |
| CspAI | ACCGGT | 2 cut(s) | 737, 1078 |
| CviAII | CATG | 7 cut(s) | 148, 193, 395, 838, 929, 1092, 1322 |
| CviQI | GTAC | 5 cut(s) | 133, 178, 534, 889, 1282 |
| DdeI | CTNAG | 8 cut(s) | 35, 240, 306, 507, 957, 1031, 1128, 1313 |
| DpnI | GATC | 4 cut(s) | 33, 621, 1222, 1311 |
| DpnII | GATC | 4 cut(s) | 31, 619, 1220, 1309 |
| EaeI | YGGCCR | 2 cut(s) | 144, 415 |
| Eam1104I | CTCTTC | 2 cut(s) | 430, 898 |
| EarI | CTCTTC | 2 cut(s) | 430, 898 |
| Eco130I | CCWWGG | 2 cut(s) | 147, 949 |
| Eco24I | GRGCYC | 1 cut(s) | 975 |
| Eco31I | GGTCTC | 1 cut(s) | 427 |
| Eco32I | GATATC | 1 cut(s) | 878 |
| Eco47I | GGWCC | 1 cut(s) | 345 |
| Eco57I | CTGAAG | 1 cut(s) | 411 |
| Eco72I | CACGTG | 1 cut(s) | 497 |
| Eco81I | CCTNAGG | 1 cut(s) | 1031 |
| EcoO109I | RGGNCCY | 1 cut(s) | 326 |
| EcoRII | CCWGG | 1 cut(s) | 417 |
| EcoRV | GATATC | 1 cut(s) | 878 |
| EcoT14I | CCWWGG | 2 cut(s) | 147, 949 |
| EcoT22I | ATGCAT | 2 cut(s) | 102, 1323 |
| EcoT38I | GRGCYC | 1 cut(s) | 975 |
| ErhI | CCWWGG | 2 cut(s) | 147, 949 |
| FaeI | CATG | 7 cut(s) | 151, 196, 398, 841, 932, 1095, 1325 |
| FatI | CATG | 7 cut(s) | 147, 192, 394, 837, 928, 1091, 1321 |
| FauI | CCCGC | 1 cut(s) | 583 |
| FokI | GGATG | 6 cut(s) | 109, 133, 198, 388, 788, 1136 |
| FriOI | GRGCYC | 1 cut(s) | 975 |
| FspBI | CTAG | 2 cut(s) | 612, 687 |
| GlaI | GCGC | 2 cut(s) | 210, 1296 |
| GsaI | CCCAGC | 1 cut(s) | 58 |
| GsuI | CTGGAG | 1 cut(s) | 936 |
| HaeIII | GGCC | 9 cut(s) | 5, 53, 146, 245, 260, 328, 417, 797, 835 |
| HapII | CCGG | 4 cut(s) | 137, 414, 738, 1079 |
| HhaI | GCGC | 2 cut(s) | 211, 1297 |
| Hin1II | CATG | 7 cut(s) | 151, 196, 398, 841, 932, 1095, 1325 |
| Hin6I | GCGC | 2 cut(s) | 209, 1295 |
| HinP1I | GCGC | 2 cut(s) | 209, 1295 |
| HinfI | GANTC | 4 cut(s) | 43, 1007, 1226, 1303 |
| HpaII | CCGG | 4 cut(s) | 137, 414, 738, 1079 |
| HphI | GGTGA | 2 cut(s) | 605, 1067 |
| Hpy166II | GTNNAC | 2 cut(s) | 178, 926 |
| Hpy188I | TCNGA | 8 cut(s) | 36, 462, 570, 619, 964, 1012, 1225, 1314 |
| Hpy188III | TCNNGA | 4 cut(s) | 343, 725, 873, 1307 |
| Hpy8I | GTNNAC | 2 cut(s) | 178, 926 |
| HpyAV | CCTTC | 3 cut(s) | 401, 461, 1114 |
| HpyCH4III | ACNGT | 3 cut(s) | 888, 1159, 1177 |
| HpyCH4IV | ACGT | 1 cut(s) | 496 |
| HpyF3I | CTNAG | 8 cut(s) | 35, 240, 306, 507, 957, 1031, 1128, 1313 |
| HpySE526I | ACGT | 1 cut(s) | 496 |
| Hsp92II | CATG | 7 cut(s) | 151, 196, 398, 841, 932, 1095, 1325 |
| HspAI | GCGC | 2 cut(s) | 209, 1295 |
| Kzo9I | GATC | 4 cut(s) | 31, 619, 1220, 1309 |
| LweI | GCATC | 8 cut(s) | 87, 109, 117, 147, 220, 226, 718, 1114 |
| MaeI | CTAG | 2 cut(s) | 612, 687 |
| MaeII | ACGT | 1 cut(s) | 496 |
| MaeIII | GTNAC | 3 cut(s) | 593, 655, 1232 |
| MalI | GATC | 4 cut(s) | 33, 621, 1222, 1311 |
| MbiI | CCGCTC | 1 cut(s) | 280 |
| MboI | GATC | 4 cut(s) | 31, 619, 1220, 1309 |
| MboII | GAAGA | 5 cut(s) | 331, 417, 885, 1037, 1338 |
| MflI | RGATCY | 1 cut(s) | 1309 |
| MhlI | GDGCHC | 2 cut(s) | 41, 975 |
| MluCI | AATT | 1 cut(s) | 1049 |
| MlyI | GAGTC | 2 cut(s) | 37, 1220 |
| MmeI | TCCRAC | 2 cut(s) | 976, 1063 |
| Mph1103I | ATGCAT | 2 cut(s) | 102, 1323 |
| MseI | TTAA | 3 cut(s) | 705, 1338, 1351 |
| MslI | CAYNNNNRTG | 2 cut(s) | 152, 933 |
| MspA1I | CMGCKG | 2 cut(s) | 506, 1331 |
| MspI | CCGG | 4 cut(s) | 137, 414, 738, 1079 |
| MspR9I | CCNGG | 2 cut(s) | 137, 419 |
| Mva1269I | GAATGC | 2 cut(s) | 1138, 1156 |
| MvaI | CCWGG | 1 cut(s) | 419 |
| MvnI | CGCG | 1 cut(s) | 209 |
| NciI | CCSGG | 1 cut(s) | 137 |
| NcoI | CCATGG | 1 cut(s) | 147 |
| NdeII | GATC | 4 cut(s) | 31, 619, 1220, 1309 |
| NlaIII | CATG | 7 cut(s) | 151, 196, 398, 841, 932, 1095, 1325 |
| NlaIV | GGNNCC | 2 cut(s) | 327, 940 |
| NmuCI | GTSAC | 2 cut(s) | 593, 655 |
| NsiI | ATGCAT | 2 cut(s) | 102, 1323 |
| NspI | RCATGY | 4 cut(s) | 196, 932, 1095, 1325 |
| PaeI | GCATGC | 2 cut(s) | 1095, 1325 |
| PctI | GAATGC | 2 cut(s) | 1138, 1156 |
| PfeI | GAWTC | 2 cut(s) | 1007, 1303 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 376 |
| PinAI | ACCGGT | 2 cut(s) | 737, 1078 |
| PleI | GAGTC | 2 cut(s) | 37, 1220 |
| PmaCI | CACGTG | 1 cut(s) | 497 |
| PmlI | CACGTG | 1 cut(s) | 497 |
| PpsI | GAGTC | 2 cut(s) | 37, 1220 |
| Ppu21I | YACGTR | 1 cut(s) | 497 |
| Psp6I | CCWGG | 1 cut(s) | 417 |
| PspCI | CACGTG | 1 cut(s) | 497 |
| PspFI | CCCAGC | 1 cut(s) | 54 |
| PspGI | CCWGG | 1 cut(s) | 417 |
| PspN4I | GGNNCC | 2 cut(s) | 327, 940 |
| PspPI | GGNCC | 5 cut(s) | 4, 52, 326, 345, 834 |
| PstI | CTGCAG | 2 cut(s) | 522, 1330 |
| PsuI | RGATCY | 1 cut(s) | 1309 |
| PvuII | CAGCTG | 2 cut(s) | 506, 1331 |
| RsaI | GTAC | 5 cut(s) | 134, 179, 535, 890, 1283 |
| RsaNI | GTAC | 5 cut(s) | 133, 178, 534, 889, 1282 |
| RseI | CAYNNNNRTG | 2 cut(s) | 152, 933 |
| SaqAI | TTAA | 3 cut(s) | 705, 1338, 1351 |
| Sau3AI | GATC | 4 cut(s) | 31, 619, 1220, 1309 |
| Sau96I | GGNCC | 5 cut(s) | 4, 52, 326, 345, 834 |
| ScaI | AGTACT | 1 cut(s) | 890 |
| SchI | GAGTC | 2 cut(s) | 37, 1220 |
| ScrFI | CCNGG | 2 cut(s) | 137, 419 |
| SduI | GDGCHC | 2 cut(s) | 41, 975 |
| SfaNI | GCATC | 8 cut(s) | 87, 109, 117, 147, 220, 226, 718, 1114 |
| SfcI | CTRYAG | 3 cut(s) | 518, 648, 1326 |
| SinI | GGWCC | 1 cut(s) | 345 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 152, 933 |
| SmlI | CTYRAG | 2 cut(s) | 281, 1228 |
| SmoI | CTYRAG | 2 cut(s) | 281, 1228 |
| SpeI | ACTAGT | 1 cut(s) | 611 |
| SphI | GCATGC | 2 cut(s) | 1095, 1325 |
| Sse9I | AATT | 1 cut(s) | 1049 |
| SspMI | CTAG | 2 cut(s) | 612, 687 |
| StyD4I | CCNGG | 2 cut(s) | 135, 417 |
| StyI | CCWWGG | 2 cut(s) | 147, 949 |
| TaaI | ACNGT | 3 cut(s) | 888, 1159, 1177 |
| TaiI | ACGT | 1 cut(s) | 499 |
| TaqI | TCGA | 1 cut(s) | 827 |
| TasI | AATT | 1 cut(s) | 1049 |
| TatI | WGTACW | 1 cut(s) | 888 |
| TauI | GCSGC | 9 cut(s) | 24, 143, 146, 209, 248, 251, 254, 277, 280 |
| TfiI | GAWTC | 2 cut(s) | 1007, 1303 |
| Tru1I | TTAA | 3 cut(s) | 705, 1338, 1351 |
| Tru9I | TTAA | 3 cut(s) | 705, 1338, 1351 |
| TscAI | CASTG | 4 cut(s) | 31, 98, 1220, 1244 |
| TseFI | GTSAC | 2 cut(s) | 593, 655 |
| Tsp45I | GTSAC | 2 cut(s) | 593, 655 |
| TspDTI | ATGAA | 4 cut(s) | 383, 792, 824, 1154 |
| TspRI | CASTG | 4 cut(s) | 31, 98, 1220, 1244 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 376 |
| VpaK11BI | GGWCC | 1 cut(s) | 345 |
| XceI | RCATGY | 4 cut(s) | 196, 932, 1095, 1325 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1244 |
| XspI | CTAG | 2 cut(s) | 612, 687 |
| ZrmI | AGTACT | 1 cut(s) | 890 |
| Zsp2I | ATGCAT | 2 cut(s) | 102, 1323 |