polyadenylate-binding protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G49600 AT1G49600 AT1G49600 AT3G19130 |
| fragaria_vesca | FvH4_2g06660 FvH4_2g06660 FvH4_2g06660 |
| malus_domestica | MD05G1076000.v1.1 MD10G1090700.v1.1 |
| prunus_persica | Prupe.8G119500_v2.0.a1 Prupe.8G119500_v2.0.a1 |
| pyrus_communis | pycom05g06950 pycom10g07420 |
| rosa_chinensis | RchiOBHm_Chr4g0407821 RchiOBHm_Chr6g0258701 |
| rosa_laevigata | RLG00000014588 |
| rosa_multiflora | Rmu_ssc0000014.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00352380 Rroxscaffold_7G00206030 |
| rosa_rugosa | Rorug04G0081300 Rorug05G0582900 Rorug05G0583000 Rorug05G0583100 |
| rosa_samantha | Rh4AG146600 Rh4BG144100 Rh4CG153100 Rh4DG140600 Rh6BG091100 Rh6DG082700 |
| rosa_wichuraiana | Rw0G022700 Rw6G008630 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 378 |
| AccB1I | GGYRCC | 1 cut(s) | 926 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 382 |
| AccBSI | CCGCTC | 1 cut(s) | 292 |
| AccII | CGCG | 1 cut(s) | 221 |
| AcoI | YGGCCR | 3 cut(s) | 156, 258, 421 |
| AcuI | CTGAAG | 1 cut(s) | 417 |
| AcvI | CACGTG | 1 cut(s) | 503 |
| AdeI | CACNNNGTG | 1 cut(s) | 908 |
| AfaI | GTAC | 4 cut(s) | 146, 191, 541, 1271 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 154, 382 |
| AgeI | ACCGGT | 1 cut(s) | 1066 |
| AgsI | TTSAA | 2 cut(s) | 731, 753 |
| AhlI | ACTAGT | 1 cut(s) | 617 |
| AjnI | CCWGG | 1 cut(s) | 423 |
| AluBI | AGCT | 3 cut(s) | 512, 653, 1319 |
| AluI | AGCT | 3 cut(s) | 512, 653, 1319 |
| Alw21I | GWGCWC | 1 cut(s) | 44 |
| Alw26I | GTCTC | 2 cut(s) | 315, 1057 |
| AoxI | GGCC | 9 cut(s) | 3, 54, 156, 258, 270, 332, 421, 801, 839 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1153, 1185 |
| AsiGI | ACCGGT | 1 cut(s) | 1066 |
| AspLEI | GCGC | 2 cut(s) | 223, 1285 |
| AspS9I | GGNCC | 5 cut(s) | 4, 55, 332, 351, 840 |
| AsuC2I | CCSGG | 1 cut(s) | 149 |
| AsuHPI | GGTGA | 2 cut(s) | 611, 1055 |
| AvaII | GGWCC | 1 cut(s) | 351 |
| AxyI | CCTNAGG | 1 cut(s) | 1019 |
| BanI | GGYRCC | 1 cut(s) | 926 |
| BanII | GRGCYC | 1 cut(s) | 963 |
| BbrPI | CACGTG | 1 cut(s) | 503 |
| BbsI | GAAGAC | 2 cut(s) | 1020, 1326 |
| Bbv12I | GWGCWC | 1 cut(s) | 44 |
| BbvCI | CCTCAGC | 1 cut(s) | 513 |
| BccI | CCATC | 6 cut(s) | 127, 178, 322, 362, 376, 947 |
| BceAI | ACGGC | 3 cut(s) | 34, 251, 1012 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 551, 585, 1148, 1182 |
| BciT130I | CCWGG | 1 cut(s) | 425 |
| BcnI | CCSGG | 1 cut(s) | 149 |
| BcoDI | GTCTC | 2 cut(s) | 315, 1057 |
| BcuI | ACTAGT | 1 cut(s) | 617 |
| BfaI | CTAG | 2 cut(s) | 618, 693 |
| BfmI | CTRYAG | 3 cut(s) | 524, 654, 1314 |
| BfuAI | ACCTGC | 1 cut(s) | 378 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 269 |
| BglII | AGATCT | 1 cut(s) | 1297 |
| Bme1390I | CCNGG | 2 cut(s) | 149, 425 |
| Bme18I | GGWCC | 1 cut(s) | 351 |
| BmgT120I | GGNCC | 5 cut(s) | 4, 55, 332, 351, 840 |
| BmiI | GGNNCC | 2 cut(s) | 333, 928 |
| BmrFI | CCNGG | 2 cut(s) | 149, 425 |
| BmrI | ACTGGG | 1 cut(s) | 589 |
| BmsI | GCATC | 8 cut(s) | 99, 121, 129, 159, 232, 238, 724, 1102 |
| BmuI | ACTGGG | 1 cut(s) | 589 |
| BpiI | GAAGAC | 2 cut(s) | 1020, 1326 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 31, 63 |
| Bpu10I | CCTNAGC | 2 cut(s) | 252, 513 |
| BpuEI | CTTGAG | 2 cut(s) | 278, 1201 |
| BpuMI | CCSGG | 1 cut(s) | 149 |
| BsaAI | YACGTR | 1 cut(s) | 503 |
| BsaBI | GATNNNNATC | 1 cut(s) | 703 |
| BsaJI | CCNNGG | 3 cut(s) | 159, 267, 937 |
| BsaWI | WCCGGW | 1 cut(s) | 1066 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 154, 382 |
| Bse118I | RCCGGY | 2 cut(s) | 419, 1066 |
| Bse1I | ACTGG | 3 cut(s) | 584, 748, 1225 |
| Bse21I | CCTNAGG | 1 cut(s) | 1019 |
| Bse3DI | GCAATG | 3 cut(s) | 134, 930, 1131 |
| Bse8I | GATNNNNATC | 1 cut(s) | 703 |
| BseBI | CCWGG | 1 cut(s) | 425 |
| BseDI | CCNNGG | 3 cut(s) | 159, 267, 937 |
| BseGI | GGATG | 6 cut(s) | 114, 138, 223, 387, 787, 1117 |
| BseJI | GATNNNNATC | 1 cut(s) | 703 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 154, 382 |
| BseMI | GCAATG | 3 cut(s) | 134, 930, 1131 |
| BseMII | CTCAG | 8 cut(s) | 29, 266, 326, 504, 959, 1033, 1107, 1292 |
| BseNI | ACTGG | 3 cut(s) | 584, 748, 1225 |
| BseX3I | CGGCCG | 1 cut(s) | 258 |
| BseYI | CCCAGC | 1 cut(s) | 57 |
| BsgI | GTGCAG | 1 cut(s) | 356 |
| Bsh1236I | CGCG | 1 cut(s) | 221 |
| Bsh1285I | CGRYCG | 1 cut(s) | 261 |
| BshFI | GGCC | 9 cut(s) | 5, 56, 158, 260, 272, 334, 423, 803, 841 |
| BshNI | GGYRCC | 1 cut(s) | 926 |
| BshTI | ACCGGT | 1 cut(s) | 1066 |
| BsiEI | CGRYCG | 1 cut(s) | 261 |
| BsiHKAI | GWGCWC | 1 cut(s) | 44 |
| BsiSI | CCGG | 3 cut(s) | 149, 420, 1067 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 154, 382 |
| BsmAI | GTCTC | 2 cut(s) | 315, 1057 |
| BsmI | GAATGC | 2 cut(s) | 1126, 1144 |
| BsnI | GGCC | 9 cut(s) | 5, 56, 158, 260, 272, 334, 423, 803, 841 |
| Bsp1286I | GDGCHC | 2 cut(s) | 44, 963 |
| Bsp143I | GATC | 4 cut(s) | 34, 625, 1208, 1297 |
| Bsp19I | CCATGG | 1 cut(s) | 159 |
| BspANI | GGCC | 9 cut(s) | 5, 56, 158, 260, 272, 334, 423, 803, 841 |
| BspCNI | CTCAG | 8 cut(s) | 30, 265, 325, 505, 958, 1032, 1108, 1293 |
| BspFNI | CGCG | 1 cut(s) | 221 |
| BspLI | GGNNCC | 2 cut(s) | 333, 928 |
| BspMAI | CTGCAG | 2 cut(s) | 528, 1318 |
| BspMI | ACCTGC | 1 cut(s) | 378 |
| BspT107I | GGYRCC | 1 cut(s) | 926 |
| BsrBI | CCGCTC | 1 cut(s) | 292 |
| BsrDI | GCAATG | 3 cut(s) | 134, 930, 1131 |
| BsrFI | RCCGGY | 2 cut(s) | 419, 1066 |
| BsrI | ACTGG | 3 cut(s) | 584, 748, 1225 |
| BssAI | RCCGGY | 2 cut(s) | 419, 1066 |
| BssECI | CCNNGG | 3 cut(s) | 159, 267, 937 |
| BssMI | GATC | 4 cut(s) | 34, 625, 1208, 1297 |
| BssT1I | CCWWGG | 2 cut(s) | 159, 937 |
| Bst2UI | CCWGG | 1 cut(s) | 425 |
| Bst4CI | ACNGT | 2 cut(s) | 1147, 1165 |
| Bst6I | CTCTTC | 1 cut(s) | 904 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 109, 205, 926, 1280 |
| BstBAI | YACGTR | 1 cut(s) | 503 |
| BstC8I | GCNNGC | 6 cut(s) | 249, 364, 839, 959, 1081, 1311 |
| BstDEI | CTNAG | 8 cut(s) | 38, 252, 312, 513, 945, 1019, 1116, 1301 |
| BstDSI | CCRYGG | 2 cut(s) | 159, 267 |
| BstF5I | GGATG | 6 cut(s) | 114, 138, 223, 387, 787, 1117 |
| BstFNI | CGCG | 1 cut(s) | 221 |
| BstHHI | GCGC | 2 cut(s) | 223, 1285 |
| BstKTI | GATC | 4 cut(s) | 37, 628, 1211, 1300 |
| BstMAI | GTCTC | 2 cut(s) | 315, 1057 |
| BstMBI | GATC | 4 cut(s) | 34, 625, 1208, 1297 |
| BstMCI | CGRYCG | 1 cut(s) | 261 |
| BstNI | CCWGG | 1 cut(s) | 425 |
| BstNSI | RCATGY | 4 cut(s) | 208, 920, 1083, 1313 |
| BstSCI | CCNGG | 2 cut(s) | 147, 423 |
| BstSFI | CTRYAG | 3 cut(s) | 524, 654, 1314 |
| BstUI | CGCG | 1 cut(s) | 221 |
| BstV2I | GAAGAC | 2 cut(s) | 1020, 1326 |
| BstX2I | RGATCY | 1 cut(s) | 1297 |
| BstYI | RGATCY | 1 cut(s) | 1297 |
| BstZI | CGGCCG | 1 cut(s) | 258 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1019 |
| BsuRI | GGCC | 9 cut(s) | 5, 56, 158, 260, 272, 334, 423, 803, 841 |
| BtgI | CCRYGG | 2 cut(s) | 159, 267 |
| BtgZI | GCGATG | 2 cut(s) | 152, 179 |
| BtsCI | GGATG | 6 cut(s) | 114, 138, 223, 387, 787, 1117 |
| BtsI | GCAGTG | 2 cut(s) | 110, 1208 |
| BtsIMutI | CAGTG | 3 cut(s) | 110, 1208, 1232 |
| BveI | ACCTGC | 1 cut(s) | 378 |
| Cac8I | GCNNGC | 6 cut(s) | 249, 364, 839, 959, 1081, 1311 |
| CciNI | GCGGCCGC | 1 cut(s) | 258 |
| CfoI | GCGC | 2 cut(s) | 223, 1285 |
| Cfr10I | RCCGGY | 2 cut(s) | 419, 1066 |
| Cfr13I | GGNCC | 5 cut(s) | 4, 55, 332, 351, 840 |
| Csp6I | GTAC | 4 cut(s) | 145, 190, 540, 1270 |
| CspAI | ACCGGT | 1 cut(s) | 1066 |
| CviAII | CATG | 7 cut(s) | 160, 205, 401, 844, 917, 1080, 1310 |
| CviQI | GTAC | 4 cut(s) | 145, 190, 540, 1270 |
| DdeI | CTNAG | 8 cut(s) | 38, 252, 312, 513, 945, 1019, 1116, 1301 |
| DpnI | GATC | 4 cut(s) | 36, 627, 1210, 1299 |
| DpnII | GATC | 4 cut(s) | 34, 625, 1208, 1297 |
| DraIII | CACNNNGTG | 1 cut(s) | 908 |
| EaeI | YGGCCR | 3 cut(s) | 156, 258, 421 |
| EagI | CGGCCG | 1 cut(s) | 258 |
| Eam1104I | CTCTTC | 1 cut(s) | 904 |
| EarI | CTCTTC | 1 cut(s) | 904 |
| EclXI | CGGCCG | 1 cut(s) | 258 |
| Eco130I | CCWWGG | 2 cut(s) | 159, 937 |
| Eco24I | GRGCYC | 1 cut(s) | 963 |
| Eco32I | GATATC | 1 cut(s) | 884 |
| Eco47I | GGWCC | 1 cut(s) | 351 |
| Eco52I | CGGCCG | 1 cut(s) | 258 |
| Eco57I | CTGAAG | 1 cut(s) | 417 |
| Eco72I | CACGTG | 1 cut(s) | 503 |
| Eco81I | CCTNAGG | 1 cut(s) | 1019 |
| EcoO109I | RGGNCCY | 1 cut(s) | 332 |
| EcoRII | CCWGG | 1 cut(s) | 423 |
| EcoRV | GATATC | 1 cut(s) | 884 |
| EcoT14I | CCWWGG | 2 cut(s) | 159, 937 |
| EcoT22I | ATGCAT | 2 cut(s) | 114, 1311 |
| EcoT38I | GRGCYC | 1 cut(s) | 963 |
| ErhI | CCWWGG | 2 cut(s) | 159, 937 |
| FaeI | CATG | 7 cut(s) | 163, 208, 404, 847, 920, 1083, 1313 |
| FatI | CATG | 7 cut(s) | 159, 204, 400, 843, 916, 1079, 1309 |
| FauI | CCCGC | 2 cut(s) | 201, 589 |
| FokI | GGATG | 6 cut(s) | 121, 145, 210, 394, 794, 1124 |
| FriOI | GRGCYC | 1 cut(s) | 963 |
| FspBI | CTAG | 2 cut(s) | 618, 693 |
| GlaI | GCGC | 2 cut(s) | 222, 1284 |
| GsaI | CCCAGC | 1 cut(s) | 61 |
| HaeIII | GGCC | 9 cut(s) | 5, 56, 158, 260, 272, 334, 423, 803, 841 |
| HapII | CCGG | 3 cut(s) | 149, 420, 1067 |
| HhaI | GCGC | 2 cut(s) | 223, 1285 |
| Hin1II | CATG | 7 cut(s) | 163, 208, 404, 847, 920, 1083, 1313 |
| Hin6I | GCGC | 2 cut(s) | 221, 1283 |
| HinP1I | GCGC | 2 cut(s) | 221, 1283 |
| HinfI | GANTC | 4 cut(s) | 46, 995, 1214, 1291 |
| HpaII | CCGG | 3 cut(s) | 149, 420, 1067 |
| HphI | GGTGA | 2 cut(s) | 611, 1055 |
| Hpy166II | GTNNAC | 2 cut(s) | 190, 914 |
| Hpy188I | TCNGA | 8 cut(s) | 39, 468, 576, 625, 952, 1000, 1213, 1302 |
| Hpy188III | TCNNGA | 4 cut(s) | 349, 731, 879, 1295 |
| Hpy8I | GTNNAC | 2 cut(s) | 190, 914 |
| HpyAV | CCTTC | 3 cut(s) | 407, 467, 1102 |
| HpyCH4III | ACNGT | 2 cut(s) | 1147, 1165 |
| HpyCH4IV | ACGT | 1 cut(s) | 502 |
| HpyF3I | CTNAG | 8 cut(s) | 38, 252, 312, 513, 945, 1019, 1116, 1301 |
| HpySE526I | ACGT | 1 cut(s) | 502 |
| Hsp92II | CATG | 7 cut(s) | 163, 208, 404, 847, 920, 1083, 1313 |
| HspAI | GCGC | 2 cut(s) | 221, 1283 |
| Kzo9I | GATC | 4 cut(s) | 34, 625, 1208, 1297 |
| LweI | GCATC | 8 cut(s) | 99, 121, 129, 159, 232, 238, 724, 1102 |
| MaeI | CTAG | 2 cut(s) | 618, 693 |
| MaeII | ACGT | 1 cut(s) | 502 |
| MaeIII | GTNAC | 3 cut(s) | 599, 661, 1220 |
| MalI | GATC | 4 cut(s) | 36, 627, 1210, 1299 |
| MbiI | CCGCTC | 1 cut(s) | 292 |
| MboI | GATC | 4 cut(s) | 34, 625, 1208, 1297 |
| MboII | GAAGA | 5 cut(s) | 337, 423, 891, 1025, 1326 |
| MflI | RGATCY | 1 cut(s) | 1297 |
| MhlI | GDGCHC | 2 cut(s) | 44, 963 |
| MluCI | AATT | 1 cut(s) | 1037 |
| MlyI | GAGTC | 2 cut(s) | 40, 1208 |
| MmeI | TCCRAC | 2 cut(s) | 964, 1051 |
| MnlI | CCTC | 9 cut(s) | 337, 382, 508, 786, 980, 1003, 1028, 1232, 1244 |
| Mph1103I | ATGCAT | 2 cut(s) | 114, 1311 |
| MseI | TTAA | 3 cut(s) | 711, 1326, 1339 |
| MslI | CAYNNNNRTG | 2 cut(s) | 164, 921 |
| MspA1I | CMGCKG | 2 cut(s) | 512, 1319 |
| MspI | CCGG | 3 cut(s) | 149, 420, 1067 |
| MspR9I | CCNGG | 2 cut(s) | 149, 425 |
| Mva1269I | GAATGC | 2 cut(s) | 1126, 1144 |
| MvaI | CCWGG | 1 cut(s) | 425 |
| MvnI | CGCG | 1 cut(s) | 221 |
| NciI | CCSGG | 1 cut(s) | 149 |
| NcoI | CCATGG | 1 cut(s) | 159 |
| NdeII | GATC | 4 cut(s) | 34, 625, 1208, 1297 |
| NlaIII | CATG | 7 cut(s) | 163, 208, 404, 847, 920, 1083, 1313 |
| NlaIV | GGNNCC | 2 cut(s) | 333, 928 |
| NmuCI | GTSAC | 2 cut(s) | 599, 661 |
| NotI | GCGGCCGC | 1 cut(s) | 258 |
| NsiI | ATGCAT | 2 cut(s) | 114, 1311 |
| NspI | RCATGY | 4 cut(s) | 208, 920, 1083, 1313 |
| PaeI | GCATGC | 2 cut(s) | 1083, 1313 |
| PctI | GAATGC | 2 cut(s) | 1126, 1144 |
| PfeI | GAWTC | 2 cut(s) | 995, 1291 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 382 |
| PinAI | ACCGGT | 1 cut(s) | 1066 |
| PleI | GAGTC | 2 cut(s) | 40, 1208 |
| PmaCI | CACGTG | 1 cut(s) | 503 |
| PmlI | CACGTG | 1 cut(s) | 503 |
| PpsI | GAGTC | 2 cut(s) | 40, 1208 |
| Ppu21I | YACGTR | 1 cut(s) | 503 |
| Psp6I | CCWGG | 1 cut(s) | 423 |
| PspCI | CACGTG | 1 cut(s) | 503 |
| PspFI | CCCAGC | 1 cut(s) | 57 |
| PspGI | CCWGG | 1 cut(s) | 423 |
| PspN4I | GGNNCC | 2 cut(s) | 333, 928 |
| PspPI | GGNCC | 5 cut(s) | 4, 55, 332, 351, 840 |
| PstI | CTGCAG | 2 cut(s) | 528, 1318 |
| PsuI | RGATCY | 1 cut(s) | 1297 |
| PvuII | CAGCTG | 2 cut(s) | 512, 1319 |
| RsaI | GTAC | 4 cut(s) | 146, 191, 541, 1271 |
| RsaNI | GTAC | 4 cut(s) | 145, 190, 540, 1270 |
| RseI | CAYNNNNRTG | 2 cut(s) | 164, 921 |
| SaqAI | TTAA | 3 cut(s) | 711, 1326, 1339 |
| Sau3AI | GATC | 4 cut(s) | 34, 625, 1208, 1297 |
| Sau96I | GGNCC | 5 cut(s) | 4, 55, 332, 351, 840 |
| SchI | GAGTC | 2 cut(s) | 40, 1208 |
| ScrFI | CCNGG | 2 cut(s) | 149, 425 |
| SduI | GDGCHC | 2 cut(s) | 44, 963 |
| SfaNI | GCATC | 8 cut(s) | 99, 121, 129, 159, 232, 238, 724, 1102 |
| SfcI | CTRYAG | 3 cut(s) | 524, 654, 1314 |
| SinI | GGWCC | 1 cut(s) | 351 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 164, 921 |
| SmlI | CTYRAG | 2 cut(s) | 293, 1216 |
| SmoI | CTYRAG | 2 cut(s) | 293, 1216 |
| SpeI | ACTAGT | 1 cut(s) | 617 |
| SphI | GCATGC | 2 cut(s) | 1083, 1313 |
| Sse9I | AATT | 1 cut(s) | 1037 |
| SspMI | CTAG | 2 cut(s) | 618, 693 |
| StyD4I | CCNGG | 2 cut(s) | 147, 423 |
| StyI | CCWWGG | 2 cut(s) | 159, 937 |
| TaaI | ACNGT | 2 cut(s) | 1147, 1165 |
| TaiI | ACGT | 1 cut(s) | 505 |
| TaqI | TCGA | 1 cut(s) | 833 |
| TasI | AATT | 1 cut(s) | 1037 |
| TfiI | GAWTC | 2 cut(s) | 995, 1291 |
| Tru1I | TTAA | 3 cut(s) | 711, 1326, 1339 |
| Tru9I | TTAA | 3 cut(s) | 711, 1326, 1339 |
| TscAI | CASTG | 3 cut(s) | 110, 1208, 1232 |
| TseFI | GTSAC | 2 cut(s) | 599, 661 |
| Tsp45I | GTSAC | 2 cut(s) | 599, 661 |
| TspDTI | ATGAA | 4 cut(s) | 389, 798, 830, 1142 |
| TspRI | CASTG | 3 cut(s) | 110, 1208, 1232 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 382 |
| VpaK11BI | GGWCC | 1 cut(s) | 351 |
| XceI | RCATGY | 4 cut(s) | 208, 920, 1083, 1313 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1232 |
| XspI | CTAG | 2 cut(s) | 618, 693 |
| Zsp2I | ATGCAT | 2 cut(s) | 114, 1311 |