Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0004565

Physical Location & Seq

Genomic Coordinates Forward (+)

78008056 .. 78012780

Gene Structure 4725 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0582900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1752 bp

ATGATGATAGCTCGAACTCACTCTCTCACAAAACTAAAGCCCCTCATCTCCATCTCCCTCATTTCCCAATCCCTCACACCCAAACCCCCATCTTCACATCCCACTCCAATCCCTAAACCCCAATTCCAAAACCCCTCAACAAAGTCTCAACCTTTCGTCTTCTCCAACCCCTTCTCGTCTTCCCAGCCTCTCCCTCTCAGCCGCGAAGGAAATTACGATGAAGCCGCCACCGCCCCAAACCTCATCGTCTGCCCCGGTTGTGGGGTCCACATGCAGGACTCCGACCCCAAAAACCCTGGCTTCTTCCTAAAACCCTCCAAAAAGGACCCCAGGACTTACAAATTGGGTCCCCATCTCGAGCCGGTTGCTCTGGAATGTGAATTCAACGGAGCCCTGAAGAGGGGTTTCGTGATCGAGCCCGAAAACTTGGATGATTCAGGTCCCAATTTGGGTGAATTGGGATCAGAATCGAAGCCCGAAAAGCCGGTGGTGTGTGCCAGGTGCCATTCTCTGAGGCATTATGGGAGAGTGAAGGATACAGCTGTGGAGAATCTGCTGCCGGATTTCGATTTCTATCACACGGTTGGGAGGAAGCTGGCATTGGCCTCAGGGACTAGATCGGTGGTGCTGATGGTGGTGGACGCGGCGGATTTCGATGGCTCGTTTCCGAAAAAGGTGGCTAAGTTGGTGTCAGACACCATTGATGAGCATTCCACAGCTTGGAAACAGGGGAGGTCGGGAAATGTGCCAAGAGTGGTGCTTGTTGTGACCAAGATTGATCTTCTGCCGAGCTCGTTGGGGCCCACTAGGTTGGAGCATTGGGTTAGGAGTAGGGCCCGGGAGGGCGGGGCGGATAAGATTACGAGTGTGCATTTGGTGAGTGCAGTGAGGGATTGGGGGTTGAAGAATCTGGTGGATGATGTGTCTAGCTTGGCAGGGCCGAGAGGGAATGTGTGGGCAATAGGGGCACAGAATGCAGGGAAGAGTACTTTGATCAACGCAATAGGGAGGCATGGTGGAGGGAAGATTACTCACTTGACAGAAGCGCCAGTTCCGGGAACTACATTGGGAATTGTGAGAGTGGAAGGTGTGCTTCCTGGTAAGACCAAGCTGTTTGATACACCAGGGCTTTTGCATCCTCATCAGATTACAACTAGGTTGACTAGAGAGGAGCAAAGTCTTGTTAACATTAGCAAGGAGTTGAAACCGAGGACCTACAGGATCAAGGATGGTTATTCAGTTCATATTGCTGGGCTTATGAGGCTGGATATAGAAGAATCATCTGTAGATTCTGTTTATGTTACAGCATGGGCATCTCCTTATCTTCCATTACACATGGGGAAAACGGAAAATGCATCCGAAATGGTAGAGAAACATTTTGGCCGTCAGTTACAGCCACCAATCGGAGAGAATAGAGTTAAGGAGCTTGGACAGTGGGTCAAAAAGGAGTTTCACATCAGTGGAAACAGCTGGGATTCAAGTTCGGTGGACATTGCTGCTGCAGGTCTTGGCTGGTTTGCTGTTGGACTTAAAGGAGAGGCAGTTTTGAGTGTTTGGACTTATGATGGAATCGATGTTGTTCTTCGCAATTCATTGCTTCCTAATAGATCATACAATTTTGAAGTATCTGGTTTTACAGTCTCTAAAATTGTTTCTAAGGCTGACAAAGCTTCAAATAAGTCACAGCGTCAGGGTGAGAAGAAGAAGAAGAAGAAACAAACTGACCACCAAAAGGATTCTGTCACCTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1

Protein Analysis

583

Amino Acids

63.74

Weight (kDa)

9.33

Isoelectric Point (pI)

33.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MMR_HSR1	PF01926	318 - 392	8.2e-09	50S ribosome-binding GTPase
YqeH-like_C	PF21516	435 - 532	1.9e-13	YqeH-like, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004565)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49600 AT1G49600 AT1G49600 AT3G19130
fragaria_vesca	FvH4_2g06660 FvH4_2g06660 FvH4_2g06660
malus_domestica	MD05G1076000.v1.1 MD10G1090700.v1.1
prunus_persica	Prupe.8G119500_v2.0.a1 Prupe.8G119500_v2.0.a1
pyrus_communis	pycom05g06950 pycom10g07420
rosa_chinensis	RchiOBHm_Chr4g0407821 RchiOBHm_Chr6g0258701
rosa_laevigata	RLG00000014588
rosa_multiflora	Rmu_ssc0000014.1_g000001
rosa_roxburghii	Rroxscaffold_5G00352380 Rroxscaffold_7G00206030
rosa_rugosa	Rorug04G0081300 Rorug05G0582900 Rorug05G0583000 Rorug05G0583100
rosa_samantha	Rh4AG146600 Rh4BG144100 Rh4CG153100 Rh4DG140600 Rh6BG091100 Rh6DG082700
rosa_wichuraiana	Rw0G022700 Rw6G008630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1493
AccB1I	GGYRCC	1 cut(s)	501
AccB7I	CCANNNNNTGG	1 cut(s)	720
AccII	CGCG	2 cut(s)	204, 644
AciI	CCGC	7 cut(s)	202, 225, 231, 644, 647, 846, 851
AclWI	GGATC	2 cut(s)	469, 1229
AcoI	YGGCCR	1 cut(s)	1381
AcsI	RAATTY	1 cut(s)	380
AcuI	CTGAAG	1 cut(s)	416
AfaI	GTAC	1 cut(s)	988
AgsI	TTSAA	6 cut(s)	385, 904, 1204, 1479, 1622, 1674
AhdI	GACNNNNNGTC	1 cut(s)	1436
AjnI	CCWGG	5 cut(s)	295, 329, 497, 1096, 1123
AjuI	GAANNNNNNNTTGG	2 cut(s)	584, 616
AleI	CACNNNNGTG	1 cut(s)	1458
Alw21I	GWGCWC	1 cut(s)	794
Alw26I	GTCTC	2 cut(s)	150, 1645
AlwI	GGATC	2 cut(s)	469, 1229
Ama87I	CYCGRG	2 cut(s)	356, 837
AoxI	GGCC	5 cut(s)	603, 800, 834, 938, 1381
ApaI	GGGCCC	2 cut(s)	804, 838
ApeKI	GCWGC	3 cut(s)	556, 1496, 1499
ApoI	RAATTY	1 cut(s)	380
AspLEI	GCGC	1 cut(s)	1048
AsuC2I	CCSGG	4 cut(s)	255, 838, 839, 1056
AsuHPI	GGTGA	4 cut(s)	464, 889, 1706, 1735
AvaI	CYCGRG	2 cut(s)	356, 837
AvaII	GGWCC	5 cut(s)	265, 325, 347, 440, 1212
AxyI	CCTNAGG	1 cut(s)	607
BaeGI	GKGCMC	3 cut(s)	804, 838, 970
BaeI	ACNNNNGTAYC	2 cut(s)	528, 561
BanI	GGYRCC	1 cut(s)	501
BanII	GRGCYC	5 cut(s)	394, 420, 794, 804, 838
BbsI	GAAGAC	2 cut(s)	151, 171
Bbv12I	GWGCWC	1 cut(s)	794
BbvI	GCAGC	3 cut(s)	543, 1483, 1486
BccI	CCATC	7 cut(s)	59, 97, 360, 625, 650, 1223, 1559
BceAI	ACGGC	1 cut(s)	1368
BcgI	CGANNNNNNTGC	2 cut(s)	347, 381
BciT130I	CCWGG	5 cut(s)	297, 331, 499, 1098, 1125
BciVI	GTATCC	1 cut(s)	529
BclI	TGATCA	1 cut(s)	993
BcnI	CCSGG	4 cut(s)	255, 838, 839, 1056
BcoDI	GTCTC	2 cut(s)	150, 1645
BfaI	CTAG	5 cut(s)	615, 807, 927, 1155, 1164
BfmI	CTRYAG	3 cut(s)	1216, 1284, 1500
BfoI	RGCGCY	1 cut(s)	1049
BfuAI	ACCTGC	1 cut(s)	1493
BfuI	GTATCC	1 cut(s)	529
BisI	GCNGC	6 cut(s)	202, 225, 557, 645, 1497, 1500
BlsI	GCNGC	6 cut(s)	203, 226, 558, 646, 1498, 1501
BmcAI	AGTACT	1 cut(s)	988
Bme1390I	CCNGG	9 cut(s)	255, 297, 331, 499, 838, 839, 1056, 1098, 1125
Bme18I	GGWCC	5 cut(s)	265, 325, 347, 440, 1212
BmeRI	GACNNNNNGTC	1 cut(s)	1436
BmeT110I	CYCGRG	2 cut(s)	356, 837
BmrFI	CCNGG	9 cut(s)	255, 297, 331, 499, 838, 839, 1056, 1098, 1125
BmsI	GCATC	3 cut(s)	1144, 1322, 1364
BpiI	GAAGAC	2 cut(s)	151, 171
BpuMI	CCSGG	4 cut(s)	255, 838, 839, 1056
Bsa29I	ATCGAT	1 cut(s)	1572
BsaBI	GATNNNNATC	2 cut(s)	466, 573
BsaJI	CCNNGG	6 cut(s)	253, 295, 329, 837, 1124, 1208
BsaXI	ACNNNNNCTCC	4 cut(s)	1000, 1030, 1527, 1557
Bse118I	RCCGGY	2 cut(s)	361, 484
Bse1I	ACTGG	1 cut(s)	1049
Bse21I	CCTNAGG	1 cut(s)	607
Bse3DI	GCAATG	2 cut(s)	1491, 1592
Bse8I	GATNNNNATC	2 cut(s)	466, 573
BseBI	CCWGG	5 cut(s)	297, 331, 499, 1098, 1125
BseCI	ATCGAT	1 cut(s)	1572
BseDI	CCNNGG	6 cut(s)	253, 295, 329, 837, 1124, 1208
BseGI	GGATG	6 cut(s)	97, 436, 922, 1135, 1234, 1355
BseJI	GATNNNNATC	2 cut(s)	466, 573
BseMI	GCAATG	2 cut(s)	1491, 1592
BseMII	CTCAG	3 cut(s)	211, 503, 621
BseNI	ACTGG	1 cut(s)	1049
BseRI	GAGGAG	1 cut(s)	1184
BseSI	GKGCMC	3 cut(s)	804, 838, 970
BseXI	GCAGC	3 cut(s)	543, 1483, 1486
BseYI	CCCAGC	3 cut(s)	183, 1250, 1470
BsgI	GTGCAG	1 cut(s)	903
Bsh1236I	CGCG	2 cut(s)	204, 644
BshFI	GGCC	5 cut(s)	605, 802, 836, 940, 1383
BshNI	GGYRCC	1 cut(s)	501
BshVI	ATCGAT	1 cut(s)	1572
BsiHKAI	GWGCWC	1 cut(s)	794
BsiHKCI	CYCGRG	2 cut(s)	356, 837
BsiSI	CCGG	6 cut(s)	255, 362, 485, 560, 838, 1055
BslFI	GGGAC	3 cut(s)	333, 426, 625
BsmAI	GTCTC	2 cut(s)	150, 1645
BsmFI	GGGAC	3 cut(s)	333, 426, 625
BsmI	GAATGC	2 cut(s)	709, 979
BsnI	GGCC	5 cut(s)	605, 802, 836, 940, 1383
BsoBI	CYCGRG	2 cut(s)	356, 837
Bsp120I	GGGCCC	2 cut(s)	800, 834
Bsp1286I	GDGCHC	6 cut(s)	394, 420, 794, 804, 838, 970
Bsp143I	GATC	7 cut(s)	411, 461, 617, 778, 993, 1221, 1607
BspACI	CCGC	7 cut(s)	202, 225, 231, 644, 647, 846, 851
BspANI	GGCC	5 cut(s)	605, 802, 836, 940, 1383
BspCNI	CTCAG	3 cut(s)	210, 504, 620
BspDI	ATCGAT	1 cut(s)	1572
BspFNI	CGCG	2 cut(s)	204, 644
BspMAI	CTGCAG	1 cut(s)	1504
BspMI	ACCTGC	1 cut(s)	1493
BspPI	GGATC	2 cut(s)	469, 1229
BspT107I	GGYRCC	1 cut(s)	501
BsrDI	GCAATG	2 cut(s)	1491, 1592
BsrFI	RCCGGY	2 cut(s)	361, 484
BsrI	ACTGG	1 cut(s)	1049
BssAI	RCCGGY	2 cut(s)	361, 484
BssECI	CCNNGG	6 cut(s)	253, 295, 329, 837, 1124, 1208
BssMI	GATC	7 cut(s)	411, 461, 617, 778, 993, 1221, 1607
Bst2UI	CCWGG	5 cut(s)	297, 331, 499, 1098, 1125
Bst4CI	ACNGT	3 cut(s)	583, 1434, 1639
Bst6I	CTCTTC	2 cut(s)	392, 977
BstAPI	GCANNNNNTGC	1 cut(s)	974
BstC8I	GCNNGC	1 cut(s)	597
BstDEI	CTNAG	5 cut(s)	197, 512, 607, 681, 1656
BstF5I	GGATG	6 cut(s)	97, 436, 922, 1135, 1234, 1355
BstFNI	CGCG	2 cut(s)	204, 644
BstH2I	RGCGCY	1 cut(s)	1049
BstHHI	GCGC	1 cut(s)	1048
BstKTI	GATC	7 cut(s)	414, 464, 620, 781, 996, 1224, 1610
BstMAI	GTCTC	2 cut(s)	150, 1645
BstMBI	GATC	7 cut(s)	411, 461, 617, 778, 993, 1221, 1607
BstMWI	GCNNNNNNNGC	6 cut(s)	230, 481, 965, 974, 1261, 1667
BstNI	CCWGG	5 cut(s)	297, 331, 499, 1098, 1125
BstNSI	RCATGY	1 cut(s)	274
BstSCI	CCNGG	9 cut(s)	253, 295, 329, 497, 836, 837, 1054, 1096, 1123
BstSFI	CTRYAG	3 cut(s)	1216, 1284, 1500
BstSLI	GKGCMC	3 cut(s)	804, 838, 970
BstUI	CGCG	2 cut(s)	204, 644
BstV1I	GCAGC	3 cut(s)	543, 1483, 1486
BstV2I	GAAGAC	2 cut(s)	151, 171
BstXI	CCANNNNNNTGG	1 cut(s)	811
Bsu15I	ATCGAT	1 cut(s)	1572
Bsu36I	CCTNAGG	1 cut(s)	607
BsuI	GTATCC	1 cut(s)	529
BsuRI	GGCC	5 cut(s)	605, 802, 836, 940, 1383
BsuTUI	ATCGAT	1 cut(s)	1572
BtsCI	GGATG	6 cut(s)	97, 436, 922, 1135, 1234, 1355
BtsI	GCAGTG	1 cut(s)	891
BtsIMutI	CAGTG	3 cut(s)	891, 1439, 1465
BveI	ACCTGC	1 cut(s)	1493
Cac8I	GCNNGC	1 cut(s)	597
CfoI	GCGC	1 cut(s)	1048
Cfr10I	RCCGGY	2 cut(s)	361, 484
Cfr9I	CCCGGG	1 cut(s)	837
ClaI	ATCGAT	1 cut(s)	1572
CseI	GACGC	2 cut(s)	650, 1676
Csp6I	GTAC	1 cut(s)	987
CspCI	CAANNNNNGTGG	2 cut(s)	1467, 1502
CviAII	CATG	4 cut(s)	271, 1013, 1308, 1336
CviQI	GTAC	1 cut(s)	987
DdeI	CTNAG	5 cut(s)	197, 512, 607, 681, 1656
DpnI	GATC	7 cut(s)	413, 463, 619, 780, 995, 1223, 1609
DpnII	GATC	7 cut(s)	411, 461, 617, 778, 993, 1221, 1607
DriI	GACNNNNNGTC	1 cut(s)	1436
EaeI	YGGCCR	1 cut(s)	1381
Eam1104I	CTCTTC	2 cut(s)	392, 977
Eam1105I	GACNNNNNGTC	1 cut(s)	1436
EarI	CTCTTC	2 cut(s)	392, 977
EciI	GGCGGA	2 cut(s)	662, 866
Ecl136II	GAGCTC	1 cut(s)	792
Eco24I	GRGCYC	5 cut(s)	394, 420, 794, 804, 838
Eco47I	GGWCC	5 cut(s)	265, 325, 347, 440, 1212
Eco53kI	GAGCTC	1 cut(s)	792
Eco57I	CTGAAG	1 cut(s)	416
Eco81I	CCTNAGG	1 cut(s)	607
Eco88I	CYCGRG	2 cut(s)	356, 837
EcoICRI	GAGCTC	1 cut(s)	792
EcoO109I	RGGNCCY	6 cut(s)	325, 347, 440, 800, 834, 1212
EcoRI	GAATTC	1 cut(s)	380
EcoRII	CCWGG	5 cut(s)	295, 329, 497, 1096, 1123
EcoT22I	ATGCAT	1 cut(s)	1357
EcoT38I	GRGCYC	5 cut(s)	394, 420, 794, 804, 838
FaeI	CATG	4 cut(s)	274, 1016, 1311, 1339
FalI	AAGNNNNNCTT	2 cut(s)	1077, 1109
FaqI	GGGAC	3 cut(s)	333, 426, 625
FatI	CATG	4 cut(s)	270, 1012, 1307, 1335
FauI	CCCGC	1 cut(s)	839
FbaI	TGATCA	1 cut(s)	993
Fnu4HI	GCNGC	6 cut(s)	202, 225, 557, 645, 1497, 1500
FokI	GGATG	6 cut(s)	84, 443, 929, 1122, 1241, 1342
FriOI	GRGCYC	5 cut(s)	394, 420, 794, 804, 838
Fsp4HI	GCNGC	6 cut(s)	202, 225, 557, 645, 1497, 1500
FspBI	CTAG	5 cut(s)	615, 807, 927, 1155, 1164
GlaI	GCGC	1 cut(s)	1047
GluI	GCNGC	6 cut(s)	202, 225, 557, 645, 1497, 1500
GsaI	CCCAGC	3 cut(s)	187, 1254, 1474
HaeII	RGCGCY	1 cut(s)	1049
HaeIII	GGCC	5 cut(s)	605, 802, 836, 940, 1383
HapII	CCGG	6 cut(s)	255, 362, 485, 560, 838, 1055
HgaI	GACGC	2 cut(s)	650, 1676
HhaI	GCGC	1 cut(s)	1048
Hin1II	CATG	4 cut(s)	274, 1016, 1311, 1339
Hin6I	GCGC	1 cut(s)	1046
HinP1I	GCGC	1 cut(s)	1046
HincII	GTYRAC	2 cut(s)	1161, 1186
HindII	GTYRAC	2 cut(s)	1161, 1186
HindIII	AAGCTT	1 cut(s)	1668
HpaI	GTTAAC	1 cut(s)	1186
HpaII	CCGG	6 cut(s)	255, 362, 485, 560, 838, 1055
HphI	GGTGA	4 cut(s)	464, 889, 1706, 1735
Hpy166II	GTNNAC	5 cut(s)	268, 640, 1161, 1186, 1489
Hpy188I	TCNGA	8 cut(s)	283, 466, 513, 669, 694, 1146, 1360, 1406
Hpy188III	TCNNGA	4 cut(s)	356, 371, 409, 738
Hpy8I	GTNNAC	5 cut(s)	268, 640, 1161, 1186, 1489
HpyAV	CCTTC	4 cut(s)	181, 200, 526, 1079
HpyCH4III	ACNGT	3 cut(s)	583, 1434, 1639
HpyCH4V	TGCA	7 cut(s)	274, 871, 884, 977, 1135, 1355, 1502
HpyF10VI	GCNNNNNNNGC	6 cut(s)	230, 481, 965, 974, 1261, 1667
HpyF3I	CTNAG	5 cut(s)	197, 512, 607, 681, 1656
Hsp92II	CATG	4 cut(s)	274, 1016, 1311, 1339
HspAI	GCGC	1 cut(s)	1046
KflI	GGGWCCC	1 cut(s)	347
Ksp22I	TGATCA	1 cut(s)	993
KspAI	GTTAAC	1 cut(s)	1186
Kzo9I	GATC	7 cut(s)	411, 461, 617, 778, 993, 1221, 1607
LmnI	GCTCC	4 cut(s)	389, 814, 1171, 1423
Lsp1109I	GCAGC	3 cut(s)	543, 1483, 1486
LweI	GCATC	3 cut(s)	1144, 1322, 1364
MaeI	CTAG	5 cut(s)	615, 807, 927, 1155, 1164
MaeIII	GTNAC	5 cut(s)	766, 1300, 1389, 1680, 1741
MalI	GATC	7 cut(s)	413, 463, 619, 780, 995, 1223, 1609
MboI	GATC	7 cut(s)	411, 461, 617, 778, 993, 1221, 1607
MhlI	GDGCHC	6 cut(s)	394, 420, 794, 804, 838, 970
MlyI	GAGTC	1 cut(s)	272
MmeI	TCCRAC	4 cut(s)	189, 306, 792, 1504
Mph1103I	ATGCAT	1 cut(s)	1357
MseI	TTAA	3 cut(s)	1185, 1419, 1530
MslI	CAYNNNNRTG	1 cut(s)	1458
MspA1I	CMGCKG	2 cut(s)	542, 1470
MspI	CCGG	6 cut(s)	255, 362, 485, 560, 838, 1055
MspR9I	CCNGG	9 cut(s)	255, 297, 331, 499, 838, 839, 1056, 1098, 1125
Mva1269I	GAATGC	2 cut(s)	709, 979
MvaI	CCWGG	5 cut(s)	297, 331, 499, 1098, 1125
MvnI	CGCG	2 cut(s)	204, 644
MwoI	GCNNNNNNNGC	6 cut(s)	230, 481, 965, 974, 1261, 1667
NciI	CCSGG	4 cut(s)	255, 838, 839, 1056
NdeII	GATC	7 cut(s)	411, 461, 617, 778, 993, 1221, 1607
NlaIII	CATG	4 cut(s)	274, 1016, 1311, 1339
NmeAIII	GCCGAG	2 cut(s)	813, 966
NmuCI	GTSAC	3 cut(s)	766, 1680, 1741
NsiI	ATGCAT	1 cut(s)	1357
NspI	RCATGY	1 cut(s)	274
OliI	CACNNNNGTG	1 cut(s)	1458
PaeR7I	CTCGAG	1 cut(s)	356
PctI	GAATGC	2 cut(s)	709, 979
PfeI	GAWTC	9 cut(s)	434, 467, 550, 907, 1277, 1289, 1475, 1569, 1736
PflMI	CCANNNNNTGG	1 cut(s)	720
PfoI	TCCNGGA	1 cut(s)	1054
PkrI	GCNGC	6 cut(s)	203, 226, 558, 646, 1498, 1501
PleI	GAGTC	1 cut(s)	272
PpsI	GAGTC	1 cut(s)	272
PpuMI	RGGWCCY	4 cut(s)	325, 347, 440, 1212
Psp124BI	GAGCTC	1 cut(s)	794
Psp5II	RGGWCCY	4 cut(s)	325, 347, 440, 1212
Psp6I	CCWGG	5 cut(s)	295, 329, 497, 1096, 1123
PspFI	CCCAGC	3 cut(s)	183, 1250, 1470
PspGI	CCWGG	5 cut(s)	295, 329, 497, 1096, 1123
PspOMI	GGGCCC	2 cut(s)	800, 834
PspPPI	RGGWCCY	4 cut(s)	325, 347, 440, 1212
PstI	CTGCAG	1 cut(s)	1504
PvuII	CAGCTG	2 cut(s)	542, 1470
RsaI	GTAC	1 cut(s)	988
RsaNI	GTAC	1 cut(s)	987
RseI	CAYNNNNRTG	1 cut(s)	1458
SacI	GAGCTC	1 cut(s)	794
SaqAI	TTAA	3 cut(s)	1185, 1419, 1530
SatI	GCNGC	6 cut(s)	202, 225, 557, 645, 1497, 1500
Sau3AI	GATC	7 cut(s)	411, 461, 617, 778, 993, 1221, 1607
ScaI	AGTACT	1 cut(s)	988
SchI	GAGTC	1 cut(s)	272
ScrFI	CCNGG	9 cut(s)	255, 297, 331, 499, 838, 839, 1056, 1098, 1125
SduI	GDGCHC	6 cut(s)	394, 420, 794, 804, 838, 970
SfaNI	GCATC	3 cut(s)	1144, 1322, 1364
SfcI	CTRYAG	3 cut(s)	1216, 1284, 1500
Sfr274I	CTCGAG	1 cut(s)	356
SinI	GGWCC	5 cut(s)	265, 325, 347, 440, 1212
SlaI	CTCGAG	1 cut(s)	356
SmaI	CCCGGG	1 cut(s)	839
SmiMI	CAYNNNNRTG	1 cut(s)	1458
SmlI	CTYRAG	1 cut(s)	356
SmoI	CTYRAG	1 cut(s)	356
SsiI	CCGC	7 cut(s)	202, 225, 231, 644, 647, 846, 851
SspMI	CTAG	5 cut(s)	615, 807, 927, 1155, 1164
SstI	GAGCTC	1 cut(s)	794
StyD4I	CCNGG	9 cut(s)	253, 295, 329, 497, 836, 837, 1054, 1096, 1123
TaaI	ACNGT	3 cut(s)	583, 1434, 1639
TaqI	TCGA	7 cut(s)	13, 357, 414, 470, 567, 654, 1572
TatI	WGTACW	1 cut(s)	986
TauI	GCSGC	3 cut(s)	204, 227, 647
TfiI	GAWTC	9 cut(s)	434, 467, 550, 907, 1277, 1289, 1475, 1569, 1736
Tru1I	TTAA	3 cut(s)	1185, 1419, 1530
Tru9I	TTAA	3 cut(s)	1185, 1419, 1530
TscAI	CASTG	3 cut(s)	891, 1439, 1465
TseFI	GTSAC	3 cut(s)	766, 1680, 1741
TseI	GCWGC	3 cut(s)	556, 1496, 1499
Tsp45I	GTSAC	3 cut(s)	766, 1680, 1741
TspDTI	ATGAA	3 cut(s)	234, 1232, 1581
TspGWI	ACGGA	2 cut(s)	402, 1361
TspMI	CCCGGG	1 cut(s)	837
TspRI	CASTG	3 cut(s)	891, 1439, 1465
Van91I	CCANNNNNTGG	1 cut(s)	720
VpaK11BI	GGWCC	5 cut(s)	265, 325, 347, 440, 1212
XapI	RAATTY	1 cut(s)	380
XceI	RCATGY	1 cut(s)	274
XhoI	CTCGAG	1 cut(s)	356
XmaI	CCCGGG	1 cut(s)	837
XspI	CTAG	5 cut(s)	615, 807, 927, 1155, 1164
ZrmI	AGTACT	1 cut(s)	988
Zsp2I	ATGCAT	1 cut(s)	1357

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.