Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0002486

Physical Location & Seq

Genomic Coordinates Reverse (-)

30071157 .. 30074936

Gene Structure 3780 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1171900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2052 bp

ATGGAGGCAACGAATCAGTGGGAGGAGACAGAGGAAGCAGCAGAAACAGGCATGGCTCTGAGAAGAAAGCCGCCACAACAGGACAGCAAGACAGCAAACCTCGCCACCACTGTCTCCCGGGGTGACTTTATCTTTTCTTCCTCTGAGAGTTCATTAGCTTCTAGCGAAGCTGAAGAGGCAGAGGAAGTCAAGGAAACCCCAAGCAATGACACTCCCATTTCTCACAAAAATGGAGGTGCTGAATCCACATATGAGATCTCTGGATTCAGTGGCGGACATGTCGATTTTTCTTTCAGGAAAAACCCTGGAGATGAAATACTGGATGTCAAAGTAGCCTTTGATGAGAGTGCTGTTAGTATTACCAACCGTGAAGATGTCGGTGATAAGAAGGTTGAAGAAGAGTTGAATGGTTCTGGTACTTTATCTTCCAAGCAGTCAGTTGAGCAGAATGGACGTGATGCTTCTGGAAACAATGGGACAGCTGAACATGGGGGAGTTAAGCTGCGAGAAATCAGTGAACAAGAAGCGTCTGAATTGTATCTTGAAAGGGTATATCAGAAGCCGGCCACGCATGATTTCTACTGTCCTAATTGCAACTCTTGCATCACAAAGGTTATCATTCGCGGTAGAGAACCGGAAAATACACTACCTCCTGCTGCACCACCTCCTCCACTAGTTGATCCAATTCGATGCACTTCGTGTTTCAGTTTCCTCATTCCGGCAGGCAGCTGGTTCTTTCCTAAATTGGAACATAAAGATGAGGACGATCATACGAAACAAGAAACCAATATTGGAAAAGGTGTTGAAGCGGGAGAGTTGGTTCCAGTTCCATCGCATGACTCGGCTGGAACACTACAAGATCAAAGTAGTCAAACTGCACCAGTAAGTAAAGGTCCAGCGCCTGAAGAGCCTGTTGGAGCCACTGAAGCTGCAACAGTTGAACCCTCACGAGATAATATTCAGGGCAGCGTTGGAGTCAAAGTTCCAGTTCCATCACACGGCTTGGATGAAACGCAATATGATAAAAGTCCGGCAATGCCTGCTCAGCCAATTGGAGTTGGTGATACTGCCTCAATAGATAAACCTATGGTGACTGGTGAGTCTGTTGAAGCTAGTGTTGGAGCTAAACCTTCTGGAAATAATTTTGAGAGCGGTGTTGAAGTTGACGAGTCAGTTCCATCACATGAGTCAGATGGAACAGTACTTGATAAAAAACCTTCGGTGCCTGTTCTCCCAGTAGGAGTTGGTGAACTTGTGACCACGAAGCCCCCATCATCTCAAATAGATGTGGTAGCCATTTCACGAGATCCCGCACAAATTCAAGACAGTGACGCAGGGCCAACTACATCTGAGCTTCCTGAGAGCACGATAGTCGTTATTAGTCCAGAACCAACAATCATACCCCCCGAAACAGGTGATACCAAAACGTTAGAAATCGTCAAAAGCATTGTATACGGTGGTTTAACTGAAGCAATTACAAGCTTAGGCATCGTGACATCCGCAGCCAGTGCTGATACTGCCACACTGAACATTTTAGCTTTGGCATTGGCAAACTTACTTGGCGGACTTTTCATCATTGGTCACAATCTCTGGGAACTGAAAGATGATTATTCAAAAGTGCCCTCTGGTGAAACAGATGAAGAAGTGGGAAAATACCATAAAGTACTAGGGAAAAGAGAGAATTTCCCTCTTCATGCCTCTATTGTTATATTATCATTCATTGTTTTCGGGTTAATACCTCCTGTGGTTTATAGCTTCTCGTTCCTCCAGAGCAACAACAGGGACCTAAAGATTGCAGCAGTTGCAGTAACTTCTTTTCTATGCATCATAGTTCTCGCACTTGGAAAGGCTTATATCCAGAGGCCACCAAAGTACATAAAAACTTTACTCTACTATATTACCATCATGATTGGGGTGGGAGGTGTTTCTTACTTAGCAGGTGACCTGATTGACATACTCCTAGAGAAGCTTGGCTGGTTCCCCTCAACTGAATCCGTCTCTCTGCTGCTCCCTCAGATGAATATACTGAAACCTGCACTCGAATCCTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0003674 GO:0005215 GO:0005381 GO:0005384 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006810 GO:0006811 GO:0006812 GO:0006826 GO:0006828 GO:0006873 GO:0006875 GO:0006879 GO:0006880 GO:0008150 GO:0008324 GO:0009987 GO:0010035 GO:0010038 GO:0010039 GO:0010168 GO:0012505 GO:0015075 GO:0015318 GO:0016020 GO:0019725 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0030026 GO:0034220 GO:0034755 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0046915 GO:0046916 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051235 GO:0051238 GO:0051641 GO:0051651 GO:0051716 GO:0055065 GO:0055071 GO:0055072 GO:0055076 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071421 GO:0097577 GO:0098655 GO:0098660 GO:0098662 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

684

Amino Acids

72.84

Weight (kDa)

4.6

Isoelectric Point (pI)

48.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002486)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27870 AT4G27870 AT5G24290 AT5G24290
fragaria_vesca	FvH4_2g18570 FvH4_2g18570 FvH4_2g18570 FvH4_2g18570 FvH4_2g18580 FvH4_2g18580
malus_domestica	MD05G1171900.v1.1 MD10G1160200.v1.1
prunus_persica	Prupe.8G199300_v2.0.a1
pyrus_communis	pycom05g15860 pycom10g13830
rosa_chinensis	RchiOBHm_Chr6g0284131 RchiOBHm_Chr6g0284141 RchiOBHm_Chr6g0284151 RchiOBHm_Chr6g0284161
rosa_laevigata	RLG00000012765 RLG00000012766 RLG00000012767
rosa_multiflora	Rmu_sc0003778.1_g000035 Rmu_sc0007496.1_g000001
rosa_roxburghii	Rroxscaffold_7G00184850 Rroxscaffold_7G00184880 Rroxscaffold_7G00184890 Rroxscaffold_7G00184900
rosa_rugosa	Rorug06G0161100 Rorug06G0161200 Rorug06G0161300
rosa_samantha	Rh6AG273900 Rh6AG274000 Rh6BG274600 Rh6BG274700 Rh6CG276100 Rh6CG276200 Rh6DG269000 Rh6DG269100
rosa_wichuraiana	Rw6G023570 Rw6G023580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1928
AasI	GACNNNNNNGTC	1 cut(s)	1099
Acc36I	ACCTGC	2 cut(s)	1928, 2041
AccB1I	GGYRCC	1 cut(s)	1222
AccBSI	CCGCTC	1 cut(s)	1152
AccI	GTMKAC	1 cut(s)	1452
AccII	CGCG	1 cut(s)	624
AciI	CCGC	8 cut(s)	71, 273, 624, 809, 1152, 1311, 1500, 1563
AclI	AACGTT	1 cut(s)	1427
AclWI	GGATC	2 cut(s)	674, 1301
AcoI	YGGCCR	1 cut(s)	564
AcsI	RAATTY	2 cut(s)	1317, 1681
AcuI	CTGAAG	4 cut(s)	192, 924, 945, 1488
AdeI	CACNNNGTG	1 cut(s)	699
AfaI	GTAC	4 cut(s)	418, 1203, 1665, 1874
AfiI	CCNNNNNNNGG	3 cut(s)	718, 998, 1412
AflIII	ACRYGT	1 cut(s)	277
AgsI	TTSAA	9 cut(s)	395, 406, 545, 806, 941, 1109, 1160, 1322, 1614
AhlI	ACTAGT	1 cut(s)	673
AjiI	CACGTC	1 cut(s)	455
AjnI	CCWGG	1 cut(s)	304
AjuI	GAANNNNNNNTTGG	6 cut(s)	774, 806, 897, 929, 1101, 1133
AloI	GAACNNNNNNTCC	4 cut(s)	804, 836, 966, 998
Alw21I	GWGCWC	1 cut(s)	1367
Alw26I	GTCTC	3 cut(s)	20, 118, 2002
AlwI	GGATC	2 cut(s)	674, 1301
AlwNI	CAGNNNCTG	1 cut(s)	902
Ama87I	CYCGRG	1 cut(s)	117
AoxI	GGCC	3 cut(s)	564, 1337, 1862
ApeKI	GCWGC	9 cut(s)	38, 502, 656, 726, 929, 966, 1502, 1796, 2005
ApoI	RAATTY	2 cut(s)	1317, 1681
AspLEI	GCGC	1 cut(s)	901
AspS9I	GGNCC	3 cut(s)	893, 1337, 1783
AsuC2I	CCSGG	2 cut(s)	118, 119
AsuHPI	GGTGA	9 cut(s)	134, 392, 1073, 1102, 1109, 1259, 1427, 1640, 1952
AvaI	CYCGRG	1 cut(s)	117
AvaII	GGWCC	2 cut(s)	893, 1783
BaeGI	GKGCMC	1 cut(s)	1623
BanI	GGYRCC	1 cut(s)	1222
BarI	GAAGNNNNNNTAC	2 cut(s)	409, 441
BauI	CACGAG	2 cut(s)	948, 1302
Bbv12I	GWGCWC	1 cut(s)	1367
BbvI	GCAGC	9 cut(s)	50, 489, 643, 738, 916, 978, 1514, 1808, 1992
BccI	CCATC	6 cut(s)	838, 1000, 1186, 1187, 1279, 1910
BceAI	ACGGC	1 cut(s)	1015
BcgI	CGANNNNNNTGC	2 cut(s)	1354, 1388
BciT130I	CCWGG	1 cut(s)	306
BcnI	CCSGG	2 cut(s)	118, 119
BcoDI	GTCTC	3 cut(s)	20, 118, 2002
BcuI	ACTAGT	1 cut(s)	673
BfaI	CTAG	5 cut(s)	162, 674, 1113, 1667, 1961
BfoI	RGCGCY	1 cut(s)	902
BfuAI	ACCTGC	2 cut(s)	1928, 2041
BglII	AGATCT	1 cut(s)	255
BlpI	GCTNAGC	1 cut(s)	1044
BmcAI	AGTACT	2 cut(s)	1203, 1665
Bme1390I	CCNGG	3 cut(s)	118, 119, 306
Bme18I	GGWCC	2 cut(s)	893, 1783
BmeT110I	CYCGRG	1 cut(s)	117
BmgBI	CACGTC	1 cut(s)	455
BmgT120I	GGNCC	3 cut(s)	893, 1337, 1783
BmiI	GGNNCC	5 cut(s)	822, 919, 1224, 1784, 1979
BmrFI	CCNGG	3 cut(s)	118, 119, 306
BmrI	ACTGGG	1 cut(s)	1229
BmsI	GCATC	5 cut(s)	448, 612, 680, 1497, 1833
BmuI	ACTGGG	1 cut(s)	1229
BpmI	CTGGAG	2 cut(s)	327, 1751
Bpu10I	CCTNAGC	1 cut(s)	1483
Bpu1102I	GCTNAGC	1 cut(s)	1044
BpuMI	CCSGG	2 cut(s)	118, 119
BsaJI	CCNNGG	3 cut(s)	117, 118, 304
BsaWI	WCCGGW	1 cut(s)	634
BsaXI	ACNNNNNCTCC	6 cut(s)	634, 664, 804, 834, 966, 996
Bsc4I	CCNNNNNNNGG	3 cut(s)	718, 998, 1412
Bse118I	RCCGGY	1 cut(s)	562
Bse1I	ACTGG	7 cut(s)	324, 824, 881, 986, 1099, 1235, 1506
Bse3DI	GCAATG	2 cut(s)	211, 1041
BseBI	CCWGG	1 cut(s)	306
BseDI	CCNNGG	3 cut(s)	117, 118, 304
BseGI	GGATG	3 cut(s)	328, 1012, 1496
BseLI	CCNNNNNNNGG	3 cut(s)	718, 998, 1412
BseMI	GCAATG	2 cut(s)	211, 1041
BseMII	CTCAG	6 cut(s)	50, 135, 1058, 1341, 1350, 2027
BseNI	ACTGG	7 cut(s)	324, 824, 881, 986, 1099, 1235, 1506
BseRI	GAGGAG	2 cut(s)	38, 657
BseSI	GKGCMC	1 cut(s)	1623
BseXI	GCAGC	9 cut(s)	50, 489, 643, 738, 916, 978, 1514, 1808, 1992
BsgI	GTGCAG	3 cut(s)	642, 861, 2019
Bsh1236I	CGCG	1 cut(s)	624
BshFI	GGCC	3 cut(s)	566, 1339, 1864
BshNI	GGYRCC	1 cut(s)	1222
BsiHKAI	GWGCWC	1 cut(s)	1367
BsiHKCI	CYCGRG	1 cut(s)	117
BsiSI	CCGG	5 cut(s)	118, 563, 635, 719, 1031
BslFI	GGGAC	2 cut(s)	490, 1796
BslI	CCNNNNNNNGG	3 cut(s)	718, 998, 1412
BsmAI	GTCTC	3 cut(s)	20, 118, 2002
BsmBI	CGTCTC	1 cut(s)	2002
BsmFI	GGGAC	2 cut(s)	490, 1796
BsnI	GGCC	3 cut(s)	566, 1339, 1864
BsoBI	CYCGRG	1 cut(s)	117
Bsp1286I	GDGCHC	2 cut(s)	1367, 1623
Bsp143I	GATC	5 cut(s)	255, 679, 766, 859, 1306
Bsp1720I	GCTNAGC	1 cut(s)	1044
BspACI	CCGC	8 cut(s)	71, 273, 624, 809, 1152, 1311, 1500, 1563
BspANI	GGCC	3 cut(s)	566, 1339, 1864
BspCNI	CTCAG	6 cut(s)	51, 136, 1057, 1342, 1351, 2026
BspFNI	CGCG	1 cut(s)	624
BspHI	TCATGA	1 cut(s)	1905
BspLI	GGNNCC	5 cut(s)	822, 919, 1224, 1784, 1979
BspMI	ACCTGC	2 cut(s)	1928, 2041
BspPI	GGATC	2 cut(s)	674, 1301
BspQI	GCTCTTC	1 cut(s)	900
BspT107I	GGYRCC	1 cut(s)	1222
BsrBI	CCGCTC	1 cut(s)	1152
BsrDI	GCAATG	2 cut(s)	211, 1041
BsrFI	RCCGGY	1 cut(s)	562
BsrI	ACTGG	7 cut(s)	324, 824, 881, 986, 1099, 1235, 1506
BssAI	RCCGGY	1 cut(s)	562
BssECI	CCNNGG	3 cut(s)	117, 118, 304
BssMI	GATC	5 cut(s)	255, 679, 766, 859, 1306
BssNAI	GTATAC	1 cut(s)	1453
BssSI	CACGAG	2 cut(s)	948, 1302
Bst1107I	GTATAC	1 cut(s)	1453
Bst2BI	CACGAG	2 cut(s)	948, 1302
Bst2UI	CCWGG	1 cut(s)	306
Bst4CI	ACNGT	7 cut(s)	112, 368, 584, 937, 1201, 1328, 1457
Bst6I	CTCTTC	4 cut(s)	168, 393, 900, 1695
BstAPI	GCANNNNNTGC	4 cut(s)	600, 1040, 1508, 1802
BstC8I	GCNNGC	3 cut(s)	564, 724, 1041
BstDEI	CTNAG	8 cut(s)	59, 144, 1044, 1350, 1359, 1483, 1933, 2013
BstEII	GGTNACC	1 cut(s)	1940
BstF5I	GGATG	3 cut(s)	328, 1012, 1496
BstFNI	CGCG	1 cut(s)	624
BstH2I	RGCGCY	1 cut(s)	902
BstHHI	GCGC	1 cut(s)	901
BstKTI	GATC	5 cut(s)	258, 682, 769, 862, 1309
BstMAI	GTCTC	3 cut(s)	20, 118, 2002
BstMBI	GATC	5 cut(s)	255, 679, 766, 859, 1306
BstNI	CCWGG	1 cut(s)	306
BstNSI	RCATGY	1 cut(s)	281
BstPI	GGTNACC	1 cut(s)	1940
BstSCI	CCNGG	3 cut(s)	116, 117, 304
BstSLI	GKGCMC	1 cut(s)	1623
BstUI	CGCG	1 cut(s)	624
BstV1I	GCAGC	9 cut(s)	50, 489, 643, 738, 916, 978, 1514, 1808, 1992
BstX2I	RGATCY	2 cut(s)	255, 1306
BstYI	RGATCY	2 cut(s)	255, 1306
BstZ17I	GTATAC	1 cut(s)	1453
BsuRI	GGCC	3 cut(s)	566, 1339, 1864
BtgZI	GCGATG	1 cut(s)	816
BtrI	CACGTC	1 cut(s)	455
BtsCI	GGATG	3 cut(s)	328, 1012, 1496
BtsIMutI	CAGTG	8 cut(s)	23, 108, 274, 520, 921, 1333, 1513, 1523
BveI	ACCTGC	2 cut(s)	1928, 2041
Cac8I	GCNNGC	3 cut(s)	564, 724, 1041
CaiI	CAGNNNCTG	1 cut(s)	902
CciI	TCATGA	1 cut(s)	1905
CfoI	GCGC	1 cut(s)	901
Cfr10I	RCCGGY	1 cut(s)	562
Cfr13I	GGNCC	3 cut(s)	893, 1337, 1783
Cfr9I	CCCGGG	1 cut(s)	117
CseI	GACGC	2 cut(s)	516, 1340
Csp6I	GTAC	4 cut(s)	417, 1202, 1664, 1873
CviAII	CATG	8 cut(s)	52, 278, 488, 572, 836, 1184, 1694, 1906
CviQI	GTAC	4 cut(s)	417, 1202, 1664, 1873
DdeI	CTNAG	8 cut(s)	59, 144, 1044, 1350, 1359, 1483, 1933, 2013
DpnI	GATC	5 cut(s)	257, 681, 768, 861, 1308
DpnII	GATC	5 cut(s)	255, 679, 766, 859, 1306
DraIII	CACNNNGTG	1 cut(s)	699
DrdI	GACNNNNNNGTC	1 cut(s)	1099
DseDI	GACNNNNNNGTC	1 cut(s)	1099
EaeI	YGGCCR	1 cut(s)	564
Eam1104I	CTCTTC	4 cut(s)	168, 393, 900, 1695
EarI	CTCTTC	4 cut(s)	168, 393, 900, 1695
EciI	GGCGGA	2 cut(s)	288, 1578
Eco47I	GGWCC	2 cut(s)	893, 1783
Eco57I	CTGAAG	4 cut(s)	192, 924, 945, 1488
Eco88I	CYCGRG	1 cut(s)	117
Eco91I	GGTNACC	1 cut(s)	1940
EcoO109I	RGGNCCY	1 cut(s)	1783
EcoO65I	GGTNACC	1 cut(s)	1940
EcoRII	CCWGG	1 cut(s)	304
EcoT22I	ATGCAT	1 cut(s)	1826
Esp3I	CGTCTC	1 cut(s)	2002
FaeI	CATG	8 cut(s)	55, 281, 491, 575, 839, 1187, 1697, 1909
FaqI	GGGAC	2 cut(s)	490, 1796
FatI	CATG	8 cut(s)	51, 277, 487, 571, 835, 1183, 1693, 1905
FauI	CCCGC	2 cut(s)	802, 1318
FauNDI	CATATG	1 cut(s)	250
FblI	GTMKAC	1 cut(s)	1452
FokI	GGATG	3 cut(s)	335, 1019, 1483
FspBI	CTAG	5 cut(s)	162, 674, 1113, 1667, 1961
GlaI	GCGC	1 cut(s)	900
GsuI	CTGGAG	2 cut(s)	327, 1751
HaeII	RGCGCY	1 cut(s)	902
HaeIII	GGCC	3 cut(s)	566, 1339, 1864
HapII	CCGG	5 cut(s)	118, 563, 635, 719, 1031
HgaI	GACGC	2 cut(s)	516, 1340
HhaI	GCGC	1 cut(s)	901
Hin1II	CATG	8 cut(s)	55, 281, 491, 575, 839, 1187, 1697, 1909
Hin6I	GCGC	1 cut(s)	899
HinP1I	GCGC	1 cut(s)	899
HincII	GTYRAC	1 cut(s)	1165
HindII	GTYRAC	1 cut(s)	1165
HindIII	AAGCTT	2 cut(s)	1480, 1967
HpaII	CCGG	5 cut(s)	118, 563, 635, 719, 1031
HphI	GGTGA	9 cut(s)	134, 392, 1073, 1102, 1109, 1259, 1427, 1640, 1952
Hpy166II	GTNNAC	4 cut(s)	518, 1165, 1250, 1453
Hpy188I	TCNGA	7 cut(s)	60, 145, 532, 558, 1192, 1351, 2016
Hpy8I	GTNNAC	4 cut(s)	518, 1165, 1250, 1453
HpyAV	CCTTC	3 cut(s)	382, 1140, 1227
HpyCH4III	ACNGT	7 cut(s)	112, 368, 584, 937, 1201, 1328, 1457
HpyCH4IV	ACGT	2 cut(s)	454, 1427
HpyF3I	CTNAG	8 cut(s)	59, 144, 1044, 1350, 1359, 1483, 1933, 2013
HpySE526I	ACGT	2 cut(s)	454, 1427
Hsp92II	CATG	8 cut(s)	55, 281, 491, 575, 839, 1187, 1697, 1909
HspAI	GCGC	1 cut(s)	899
KroI	GCCGGC	1 cut(s)	562
KroNI	GCCGGC	1 cut(s)	564
Kzo9I	GATC	5 cut(s)	255, 679, 766, 859, 1306
LguI	GCTCTTC	1 cut(s)	900
LmnI	GCTCC	3 cut(s)	917, 1121, 2013
Lsp1109I	GCAGC	9 cut(s)	50, 489, 643, 738, 916, 978, 1514, 1808, 1992
LweI	GCATC	5 cut(s)	448, 612, 680, 1497, 1833
MaeI	CTAG	5 cut(s)	162, 674, 1113, 1667, 1961
MaeII	ACGT	2 cut(s)	454, 1427
MaeIII	GTNAC	8 cut(s)	122, 1090, 1255, 1328, 1492, 1580, 1807, 1940
MalI	GATC	5 cut(s)	257, 681, 768, 861, 1308
MbiI	CCGCTC	1 cut(s)	1152
MboI	GATC	5 cut(s)	255, 679, 766, 859, 1306
MfeI	CAATTG	1 cut(s)	1050
MflI	RGATCY	2 cut(s)	255, 1306
MhlI	GDGCHC	2 cut(s)	1367, 1623
MluCI	AATT	9 cut(s)	533, 589, 684, 743, 1050, 1141, 1317, 1473, 1681
MlyI	GAGTC	5 cut(s)	833, 984, 1109, 1178, 1196
MmeI	TCCRAC	3 cut(s)	895, 952, 1099
Mph1103I	ATGCAT	1 cut(s)	1826
MroNI	GCCGGC	1 cut(s)	562
MseI	TTAA	3 cut(s)	498, 1463, 1733
MslI	CAYNNNNRTG	2 cut(s)	228, 756
MspA1I	CMGCKG	2 cut(s)	482, 729
MspI	CCGG	5 cut(s)	118, 563, 635, 719, 1031
MspR9I	CCNGG	3 cut(s)	118, 119, 306
MunI	CAATTG	1 cut(s)	1050
MvaI	CCWGG	1 cut(s)	306
MvnI	CGCG	1 cut(s)	624
NaeI	GCCGGC	1 cut(s)	564
NciI	CCSGG	2 cut(s)	118, 119
NdeI	CATATG	1 cut(s)	250
NdeII	GATC	5 cut(s)	255, 679, 766, 859, 1306
NgoMIV	GCCGGC	1 cut(s)	562
NlaIII	CATG	8 cut(s)	55, 281, 491, 575, 839, 1187, 1697, 1909
NlaIV	GGNNCC	5 cut(s)	822, 919, 1224, 1784, 1979
NmeAIII	GCCGAG	1 cut(s)	821
NmuCI	GTSAC	7 cut(s)	122, 1090, 1255, 1328, 1492, 1580, 1940
NsiI	ATGCAT	1 cut(s)	1826
NspI	RCATGY	1 cut(s)	281
PagI	TCATGA	1 cut(s)	1905
PaqCI	CACCTGC	1 cut(s)	1928
PciI	ACATGT	1 cut(s)	277
PciSI	GCTCTTC	1 cut(s)	900
PdiI	GCCGGC	1 cut(s)	564
PfeI	GAWTC	5 cut(s)	13, 242, 264, 1991, 2042
PleI	GAGTC	5 cut(s)	833, 983, 1108, 1177, 1195
PpsI	GAGTC	5 cut(s)	833, 983, 1108, 1177, 1195
PpuMI	RGGWCCY	1 cut(s)	1783
PscI	ACATGT	1 cut(s)	277
Psp1406I	AACGTT	1 cut(s)	1427
Psp5II	RGGWCCY	1 cut(s)	1783
Psp6I	CCWGG	1 cut(s)	304
PspEI	GGTNACC	1 cut(s)	1940
PspGI	CCWGG	1 cut(s)	304
PspN4I	GGNNCC	5 cut(s)	822, 919, 1224, 1784, 1979
PspPI	GGNCC	3 cut(s)	893, 1337, 1783
PspPPI	RGGWCCY	1 cut(s)	1783
PstNI	CAGNNNCTG	1 cut(s)	902
PsuI	RGATCY	2 cut(s)	255, 1306
PvuII	CAGCTG	2 cut(s)	482, 729
RsaI	GTAC	4 cut(s)	418, 1203, 1665, 1874
RsaNI	GTAC	4 cut(s)	417, 1202, 1664, 1873
RseI	CAYNNNNRTG	2 cut(s)	228, 756
SapI	GCTCTTC	1 cut(s)	900
SaqAI	TTAA	3 cut(s)	498, 1463, 1733
Sau3AI	GATC	5 cut(s)	255, 679, 766, 859, 1306
Sau96I	GGNCC	3 cut(s)	893, 1337, 1783
ScaI	AGTACT	2 cut(s)	1203, 1665
SchI	GAGTC	5 cut(s)	833, 984, 1109, 1178, 1196
ScrFI	CCNGG	3 cut(s)	118, 119, 306
SduI	GDGCHC	2 cut(s)	1367, 1623
SfaNI	GCATC	5 cut(s)	448, 612, 680, 1497, 1833
SinI	GGWCC	2 cut(s)	893, 1783
SmaI	CCCGGG	1 cut(s)	119
SmiMI	CAYNNNNRTG	2 cut(s)	228, 756
SpeI	ACTAGT	1 cut(s)	673
Sse9I	AATT	9 cut(s)	533, 589, 684, 743, 1050, 1141, 1317, 1473, 1681
SsiI	CCGC	8 cut(s)	71, 273, 624, 809, 1152, 1311, 1500, 1563
SspI	AATATT	2 cut(s)	790, 958
SspMI	CTAG	5 cut(s)	162, 674, 1113, 1667, 1961
StyD4I	CCNGG	3 cut(s)	116, 117, 304
TaaI	ACNGT	7 cut(s)	112, 368, 584, 937, 1201, 1328, 1457
TaiI	ACGT	2 cut(s)	457, 1430
TaqI	TCGA	3 cut(s)	282, 688, 2040
TasI	AATT	9 cut(s)	533, 589, 684, 743, 1050, 1141, 1317, 1473, 1681
TatI	WGTACW	3 cut(s)	1201, 1663, 1872
TauI	GCSGC	1 cut(s)	73
TfiI	GAWTC	5 cut(s)	13, 242, 264, 1991, 2042
Tru1I	TTAA	3 cut(s)	498, 1463, 1733
Tru9I	TTAA	3 cut(s)	498, 1463, 1733
TscAI	CASTG	8 cut(s)	23, 115, 274, 520, 928, 1333, 1513, 1530
TseFI	GTSAC	7 cut(s)	122, 1090, 1255, 1328, 1492, 1580, 1940
TseI	GCWGC	9 cut(s)	38, 502, 656, 726, 929, 966, 1502, 1796, 2005
Tsp45I	GTSAC	7 cut(s)	122, 1090, 1255, 1328, 1492, 1580, 1940
TspDTI	ATGAA	8 cut(s)	141, 327, 1023, 1561, 1653, 1682, 1708, 2033
TspGWI	ACGGA	1 cut(s)	1984
TspMI	CCCGGG	1 cut(s)	117
TspRI	CASTG	8 cut(s)	23, 115, 274, 520, 928, 1333, 1513, 1530
VpaK11BI	GGWCC	2 cut(s)	893, 1783
XapI	RAATTY	2 cut(s)	1317, 1681
XceI	RCATGY	1 cut(s)	281
XmaI	CCCGGG	1 cut(s)	117
XmiI	GTMKAC	1 cut(s)	1452
XspI	CTAG	5 cut(s)	162, 674, 1113, 1667, 1961
ZrmI	AGTACT	2 cut(s)	1203, 1665
Zsp2I	ATGCAT	1 cut(s)	1826

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.