Rorug06G0161300

Membrane protein of ER body-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0002486
Physical Location & Seq
Reverse (-)
22990771 .. 22994313
3543 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0161300.1

Sequence Viewer

Length: 3543 bp
ATGGACTCGGCCAACATAGTTTTAGCTCCTGCTTTGCAAGTGATTTTTGACAGACTAGCTTCCCCACTCCTACAAAAGCTTGCTGATGTCTGGGACTTCAAAGACAATTTCCAGAGCCTAAGAGACGCCCTGATGATGGTTCAAGCTACTCTTGAAGATGCAGAACAGAAACAACTCACCAACAGAGCCGTTAGACTTTGGTTGTCGAATCTCAAGAATGCAGCTTCCAATGCGGATGACCTTCTCGATTACCTTACTGCTGAAGAAGCCATCAAGGGCTCTGCAGGTACAATAGATTTTCTTACTGCTCGGTATACAGATGCTGACAAGGTTAGAAAGATGCTGCAGCAGTTAGAAATGAATGTGACAGAGGGATTATCTAAGTTGAATGTTAGTAATCCTACTCAACCTCGTATGGTAGTACATCAACGATCTGATAATAGGGAGACTACTTCTTTTGTGGTTGATTCAGAGATATATGGAAGAGAGGATGATAGAAAGAAGTTAGTTAAAATGTTACTATCTTGTGAAGCTTCCCTGGAAGGATATGCAACATGTATTCCAATAATTGGTATTGGAGGAATTGGTAAGACCACTCTTGCTCAGTTAGCATATAGTGATGATAGGGTAATTCAACAGTTCGACACTAGGATGTGGGTTTTCGTCTCTCATGATTTCAATATCAAAAAGATCATGAAGACAATTATTGAGTCGGCAACTAAGGATGAATGCAAGTTCTCGGAAACTGAACTACTTCAGTCTCGGCTTTGGCACTTGCTGCAGAATAAAAAATTTCTCCTGGTTCTGGATGATGTTTGGACTGAAGACCAAGATGATTGGGACAAGCTAAGACCTTTGTTTAGAGGGAGTGTTGAAGGATGTAAAGTCATTATTACCACTCGCATGAAAAAAATTGCATTTGTGATGGACTCCCCAAATCTACCATTTTATTTGAATGGTTTAGATGATGATCATTGCTGGGATTTGTTCAAACAACGCGCTTTTGGACGAGGAGAGAAGGAGAGGTATCCCCACCTCTTGGGGATTGGGAAGCAGATTGTCAAAAAGTGTGGAGGTGTTCCATTAGCAGCAAAAAGCTTGGGAAGTTTAATGCGCTTCAAAAGAGAAGAATCACAATGGTTGTTTGTGCAAAATAGCGAATTCTGGAAATTAGAGGTATGCCAAGATAGAGTTTTACCTGCCCTCATGTTAAGTTATCTTCATTTGCCATTACATCTTAGACAATGCTTTGCATTTTGCTCATTGTTTCCCAAAAATTATGAATTCAAAAGGCAGAAGTTAATTCATATATGGATGGCGGCAGGCTTAATTCTAAAAGAGTGGCTCAAGCGACCAGAAGACATTGGTAATGAATACTTTGCTGATTTGATGTGGATGTCTTTCTTCCATGAAGTAGAGCTATGTGATGGTGGAGGCATAACTGGATACAAAATGAATGATGTGGTTCATGATCTTGCACGATATGTTGCAGGTGAAGAATCTGTGATACTTGAACAGGGTCTTCCACCAAATAGTCTAAAGCAAATTCGCCATTCATCTATTGTTTACAAATATAGGGCAATTACAATTCCAGAAGCTCTATATGAAGCAGATCATCTACGAACTCTCTTGCTGATTGGAGAAGCTGGGTCGATAGCAAAGTTTAAAAAACTGCTTTCAAGTTTTGTATACTTGCGCGTGCTAGATCTGAACAGTTGTGATGTTTATAATTTGCCTGAATCTCTGGATAGCTTGATATGTTTGAGGTACCTTGACCTGTCTTACACACCAATATCCATGTTACCCGTAAGCACAGCCAACCTTTGTTTGTTGCAGACTTTAAACCTTTTTGGTTGTCATAATCTTAAATGGTTGCCTTCCATGGGAAAGATGACCATCCTAAGACATCTCAACCTATCTGGATGTGAAAGTTTGAGTGAGATGCCTTCTGGTATTGAAAATTTACTTCAACTTCAGACATTGCCATTGTATGTTGTTAGCAGGAATCAAGGGGACCTTAGTAAGCTGGAGCATTTAAATCTTTACGGTGTGCTGAATATTACACTTCTAAAGAATGCAAGACATGCAACTGAAGCACAACTATCTCGATTGAAGATGAAGGAAAATCTTGAGACGTTAAGATTGTATTGGGGAGTATCTCACAGATTTGAAGATGTGGACATATCATTTCATAAACCAAAAGCCCCTACTGAAGATGTTGGCTCAGGATCTCAAGTAGAGCAACAACAGCAGCAAGAACCTGTTGAGGAAATTCTTGAAGGATTGCAGCCACACCAAAATCTGAAAAATCTAGTTATAGGTGGATATCCTGGTATCAGATTTCCTCATTGGACTCTCCCAAAGCTAATCGCAGTTGAGTTGATCAACTGTAAAAATTGTGAATATCTTCCAGCCCTAGGGAATCTTCTGCAGCTCAAGACTCTCTCTCTGCATGGAATGGATGGTGTGAAGCGCATTGGTACAGAGTTCTATGGTGATGGTGCAGACATACGGTTTTCATCACTTGAAGAACTATCACTGAGTAATTTCCCAAACTTGGAAGACTGGTCAAGTGCAAATAATGAAAACTCATTTCCTAGCTTGAGCAAACTAACAGTTAATAAATGTCCCAAGTTAGCACATATACCACTGTCTCAATCCCTTCAACATCTGGAGCTGCGGGATTGTAACCCAATGTTGATGGCCATAGCAAATTTAACTTTGCTTTCTGTGCTTGTTATAGAAAAACTTCCAAACTTATTATCTCTCCCAGAAGGGCTTTTCGCATCAGCTCGTTTGTCTTCTTTGAAGATCTTATCCTGTCCTAAGCTTCATTCACTGCCTTCACAAATGGGAAACCATACTGCTCTGAAATCGTTGACCATTCGTTCGTGTGAAAATTTGTCCTCTCTGCCGCAGACTTTGCAGAATCTCAAAGCTCTGGAGTCGCTGGAAATTAGTGACTGTCACAGTATAATCACCATGCCAGATGGTGGAATTGGAGGTTTGAATTCCCTTCAAATGCTGTCCATTGAGAACTGCACTAATCTGATTTCTTTATCATCGAGTTTGGAGAATCTCGTGTTCCTTGAGCATTTAACCATAATGTATTGTCCAAATCTCAGTTCTTTTCCAGATGGTGTGCATCACCTCTCTGCACTTCGAAGTTTGGCAATCTTGAGCTGTCCCTGCTTTTTTTCTCTGCCAAATGGGCTACAACATGTGAGGACGCTGCACCGTTTGGAAGTTTGTTGTTTCCCCAATCTAACAACTTTACCAGAATGGTTTGAGAATCTTGCTTCACTTAGATCTTTGACCATATGTGACTGTCCTAATTTAAAATCACTGCCACCAGGTCTAAAGCTTCTAACTAAACTCCAACACCTCTCTATTCAAGAATGTCCTGAGCTTGAGGAAAGATGTAGACAAGGAAGTGGTGAGGATTGGTTGAAAATAGCTCATGTACCACATATATACATTGGTTCACATCGGATCAGGCAGTCCAGTGAAGGGAGCACCTCAGGTGGCACATCTGCTCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VIT1

Protein Analysis

1180

Amino Acids

133.15

Weight (kDa)

6.23

Isoelectric Point (pI)

48.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 11 - 90 1.2e-16 Rx N-terminal domain
NB-ARC PF00931 164 - 336 1.4e-38 NB-ARC domain
WHD_DRP PF23559 422 - 493 3.4e-21 Disease resistance protein Winged helix domain
LRR_14 PF23598 539 - 874 1.6e-23 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 673 - 820 2.7e-28 R13L1/DRL21 LRRs
LRR_14 PF23598 899 - 1130 1e-11 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 1071 - 1134 3.4e-07 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1728
AarI CACCTGC 1 cut(s) 1481
Acc36I ACCTGC 3 cut(s) 275, 1207, 1481
Acc65I GGTACC 1 cut(s) 1767
AccB1I GGYRCC 1 cut(s) 1767
AccB7I CCANNNNNTGG 3 cut(s) 569, 1039, 2993
AccI GTMKAC 3 cut(s) 314, 1689, 3424
AccII CGCG 2 cut(s) 999, 1698
AciI CCGC 4 cut(s) 233, 1319, 2680, 2915
AclWI GGATC 2 cut(s) 2236, 3500
AcoI YGGCCR 2 cut(s) 9, 2703
AcsI RAATTY 9 cut(s) 791, 1160, 1283, 1545, 1960, 2271, 2713, 2899, 3010
AcuI CTGAAG 6 cut(s) 282, 740, 843, 1958, 2112, 2232
AcyI GRCGYC 1 cut(s) 126
AfaI GTAC 5 cut(s) 289, 423, 1769, 2482, 3465
AfiI CCNNNNNNNGG 9 cut(s) 136, 569, 805, 1039, 1883, 2417, 2557, 2993, 3510
AflIII ACRYGT 2 cut(s) 554, 3220
AjnI CCWGG 4 cut(s) 537, 798, 2329, 3352
AjuI GAANNNNNNNTTGG 2 cut(s) 3109, 3141
Alw21I GWGCWC 1 cut(s) 3518
Alw26I GTCTC 6 cut(s) 117, 440, 670, 765, 2126, 2658
AlwI GGATC 2 cut(s) 2236, 3500
AlwNI CAGNNNCTG 1 cut(s) 323
AoxI GGCC 2 cut(s) 9, 2703
ApoI RAATTY 9 cut(s) 791, 1160, 1283, 1545, 1960, 2271, 2713, 2899, 3010
ArsI GACNNNNNNTTYG 2 cut(s) 2872, 2904
Asp700I GAANNNNTTC 3 cut(s) 753, 2406, 2748
Asp718I GGTACC 1 cut(s) 1767
AspA2I CCTAGG 1 cut(s) 2416
AspLEI GCGC 4 cut(s) 1001, 1116, 1698, 2475
AspS9I GGNCC 1 cut(s) 2014
AsuHPI GGTGA 6 cut(s) 169, 1505, 2507, 2971, 3140, 3449
AsuII TTCGAA 1 cut(s) 3163
AvaII GGWCC 1 cut(s) 2014
AvrII CCTAGG 1 cut(s) 2416
AxyI CCTNAGG 1 cut(s) 3520
BalI TGGCCA 1 cut(s) 2705
BanI GGYRCC 1 cut(s) 1767
BanII GRGCYC 1 cut(s) 281
BauI CACGAG 1 cut(s) 3080
BbsI GAAGAC 6 cut(s) 704, 831, 1365, 1514, 2568, 2793
Bbv12I GWGCWC 1 cut(s) 3518
BceAI ACGGC 1 cut(s) 173
BciT130I CCWGG 4 cut(s) 539, 800, 2331, 3354
BciVI GTATCC 2 cut(s) 1038, 1439
BclI TGATCA 2 cut(s) 970, 2382
BcoDI GTCTC 6 cut(s) 117, 440, 670, 765, 2126, 2658
BfaI CTAG 6 cut(s) 56, 648, 1703, 2312, 2417, 2598
BfmI CTRYAG 4 cut(s) 282, 344, 779, 2429
BfuAI ACCTGC 3 cut(s) 275, 1207, 1481
BfuI GTATCC 2 cut(s) 1038, 1439
BglI GCCNNNNNGGC 1 cut(s) 3211
BglII AGATCT 3 cut(s) 1705, 2811, 3308
BlnI CCTAGG 1 cut(s) 2416
Bme1390I CCNGG 4 cut(s) 539, 800, 2331, 3354
Bme18I GGWCC 1 cut(s) 2014
BmgT120I GGNCC 1 cut(s) 2014
BmiI GGNNCC 2 cut(s) 1769, 2015
BmrFI CCNGG 4 cut(s) 539, 800, 2331, 3354
BmsI GCATC 6 cut(s) 148, 310, 330, 1932, 2795, 3154
BpiI GAAGAC 6 cut(s) 704, 831, 1365, 1514, 2568, 2793
BpmI CTGGAG 3 cut(s) 2048, 2693, 2963
Bpu10I CCTNAGC 3 cut(s) 2224, 2826, 3405
Bpu14I TTCGAA 1 cut(s) 3163
BpuEI CTTGAG 9 cut(s) 197, 1331, 2150, 2217, 2420, 2623, 3110, 3199, 3431
BsaBI GATNNNNATC 2 cut(s) 969, 1895
BsaHI GRCGYC 1 cut(s) 126
BsaJI CCNNGG 3 cut(s) 537, 1881, 2416
Bsc4I CCNNNNNNNGG 9 cut(s) 136, 569, 805, 1039, 1883, 2417, 2557, 2993, 3510
Bse1I ACTGG 3 cut(s) 1447, 2570, 3504
Bse21I CCTNAGG 1 cut(s) 3520
Bse3DI GCAATG 2 cut(s) 973, 1979
Bse8I GATNNNNATC 2 cut(s) 969, 1895
BseBI CCWGG 4 cut(s) 539, 800, 2331, 3354
BseDI CCNNGG 3 cut(s) 537, 1881, 2416
BseJI GATNNNNATC 2 cut(s) 969, 1895
BseLI CCNNNNNNNGG 9 cut(s) 136, 569, 805, 1039, 1883, 2417, 2557, 2993, 3510
BseMI GCAATG 2 cut(s) 973, 1979
BseMII CTCAG 6 cut(s) 617, 2238, 2531, 3136, 3396, 3534
BseNI ACTGG 3 cut(s) 1447, 2570, 3504
BseRI GAGGAG 1 cut(s) 1026
BseYI CCCAGC 2 cut(s) 978, 1646
BsgI GTGCAG 4 cut(s) 2523, 3025, 3141, 3218
Bsh1236I CGCG 2 cut(s) 999, 1698
BshFI GGCC 2 cut(s) 11, 2705
BshNI GGYRCC 1 cut(s) 1767
BsiHKAI GWGCWC 1 cut(s) 3518
BslFI GGGAC 5 cut(s) 107, 854, 2027, 2613, 3171
BslI CCNNNNNNNGG 9 cut(s) 136, 569, 805, 1039, 1883, 2417, 2557, 2993, 3510
BsmAI GTCTC 6 cut(s) 117, 440, 670, 765, 2126, 2658
BsmBI CGTCTC 3 cut(s) 117, 670, 2126
BsmFI GGGAC 5 cut(s) 107, 854, 2027, 2613, 3171
BsmI GAATGC 3 cut(s) 223, 734, 2080
BsnI GGCC 2 cut(s) 11, 2705
Bsp119I TTCGAA 1 cut(s) 3163
Bsp1286I GDGCHC 2 cut(s) 281, 3518
Bsp19I CCATGG 1 cut(s) 1881
BspACI CCGC 4 cut(s) 233, 1319, 2680, 2915
BspANI GGCC 2 cut(s) 11, 2705
BspCNI CTCAG 6 cut(s) 616, 2237, 2532, 3135, 3397, 3533
BspFNI CGCG 2 cut(s) 999, 1698
BspHI TCATGA 3 cut(s) 670, 693, 1468
BspLI GGNNCC 2 cut(s) 1769, 2015
BspMAI CTGCAG 4 cut(s) 286, 348, 783, 2433
BspMI ACCTGC 3 cut(s) 275, 1207, 1481
BspPI GGATC 2 cut(s) 2236, 3500
BspT104I TTCGAA 1 cut(s) 3163
BspT107I GGYRCC 1 cut(s) 1767
BsrDI GCAATG 2 cut(s) 973, 1979
BsrI ACTGG 3 cut(s) 1447, 2570, 3504
BssECI CCNNGG 3 cut(s) 537, 1881, 2416
BssNAI GTATAC 2 cut(s) 315, 1690
BssNI GRCGYC 1 cut(s) 126
BssSI CACGAG 1 cut(s) 3080
BssT1I CCWWGG 2 cut(s) 1881, 2416
Bst1107I GTATAC 2 cut(s) 315, 1690
Bst2BI CACGAG 1 cut(s) 3080
Bst2UI CCWGG 4 cut(s) 539, 800, 2331, 3354
Bst6I CTCTTC 1 cut(s) 478
BstACI GRCGYC 1 cut(s) 126
BstAPI GCANNNNNTGC 3 cut(s) 778, 2084, 2923
BstBI TTCGAA 1 cut(s) 3163
BstC8I GCNNGC 3 cut(s) 81, 1324, 1700
BstDSI CCRYGG 1 cut(s) 1881
BstFNI CGCG 2 cut(s) 999, 1698
BstHHI GCGC 4 cut(s) 1001, 1116, 1698, 2475
BstMAI GTCTC 6 cut(s) 117, 440, 670, 765, 2126, 2658
BstNI CCWGG 4 cut(s) 539, 800, 2331, 3354
BstNSI RCATGY 3 cut(s) 558, 2087, 3224
BstSCI CCNGG 4 cut(s) 537, 798, 2329, 3352
BstSFI CTRYAG 4 cut(s) 282, 344, 779, 2429
BstUI CGCG 2 cut(s) 999, 1698
BstV2I GAAGAC 6 cut(s) 704, 831, 1365, 1514, 2568, 2793
BstX2I RGATCY 4 cut(s) 1705, 2228, 2811, 3308
BstYI RGATCY 4 cut(s) 1705, 2228, 2811, 3308
BstZ17I GTATAC 2 cut(s) 315, 1690
Bsu36I CCTNAGG 1 cut(s) 3520
BsuI GTATCC 2 cut(s) 1038, 1439
BsuRI GGCC 2 cut(s) 11, 2705
BtgI CCRYGG 1 cut(s) 1881
BtsI GCAGTG 2 cut(s) 2837, 3344
BtsIMutI CAGTG 5 cut(s) 2537, 2648, 2837, 3344, 3511
BveI ACCTGC 3 cut(s) 275, 1207, 1481
Cac8I GCNNGC 3 cut(s) 81, 1324, 1700
CaiI CAGNNNCTG 1 cut(s) 323
CciI TCATGA 3 cut(s) 670, 693, 1468
CfoI GCGC 4 cut(s) 1001, 1116, 1698, 2475
Cfr13I GGNCC 1 cut(s) 2014
CseI GACGC 2 cut(s) 134, 3238
CsiI ACCWGGT 1 cut(s) 3352
Csp6I GTAC 5 cut(s) 288, 422, 1768, 2481, 3464
CspCI CAANNNNNGTGG 2 cut(s) 1051, 1086
CviQI GTAC 5 cut(s) 288, 422, 1768, 2481, 3464
DraI TTTAAA 4 cut(s) 1666, 1842, 2037, 3339
EaeI YGGCCR 2 cut(s) 9, 2703
Eam1104I CTCTTC 1 cut(s) 478
EarI CTCTTC 1 cut(s) 478
Eco130I CCWWGG 2 cut(s) 1881, 2416
Eco24I GRGCYC 1 cut(s) 281
Eco32I GATATC 1 cut(s) 2327
Eco47I GGWCC 1 cut(s) 2014
Eco57I CTGAAG 6 cut(s) 282, 740, 843, 1958, 2112, 2232
Eco81I CCTNAGG 1 cut(s) 3520
EcoO109I RGGNCCY 1 cut(s) 2014
EcoRI GAATTC 3 cut(s) 1160, 1283, 3010
EcoRII CCWGG 4 cut(s) 537, 798, 2329, 3352
EcoRV GATATC 1 cut(s) 2327
EcoT14I CCWWGG 2 cut(s) 1881, 2416
EcoT38I GRGCYC 1 cut(s) 281
ErhI CCWWGG 2 cut(s) 1881, 2416
Esp3I CGTCTC 3 cut(s) 117, 670, 2126
FalI AAGNNNNNCTT 4 cut(s) 135, 167, 2001, 2033
FaqI GGGAC 5 cut(s) 107, 854, 2027, 2613, 3171
FauI CCCGC 1 cut(s) 2673
FauNDI CATATG 1 cut(s) 3320
FbaI TGATCA 2 cut(s) 970, 2382
FblI GTMKAC 3 cut(s) 314, 1689, 3424
FriOI GRGCYC 1 cut(s) 281
FspBI CTAG 6 cut(s) 56, 648, 1703, 2312, 2417, 2598
GlaI GCGC 4 cut(s) 1000, 1115, 1697, 2474
GsaI CCCAGC 2 cut(s) 982, 1650
GsuI CTGGAG 3 cut(s) 2048, 2693, 2963
HaeIII GGCC 2 cut(s) 11, 2705
HgaI GACGC 2 cut(s) 134, 3238
HhaI GCGC 4 cut(s) 1001, 1116, 1698, 2475
Hin1I GRCGYC 1 cut(s) 126
Hin6I GCGC 4 cut(s) 999, 1114, 1696, 2473
HinP1I GCGC 4 cut(s) 999, 1114, 1696, 2473
HincII GTYRAC 1 cut(s) 2880
HindII GTYRAC 1 cut(s) 2880
HindIII AAGCTT 5 cut(s) 77, 531, 1096, 2828, 3362
HphI GGTGA 6 cut(s) 169, 1505, 2507, 2971, 3140, 3449
Hpy166II GTNNAC 7 cut(s) 315, 1567, 1690, 2179, 2880, 3425, 3485
Hpy8I GTNNAC 7 cut(s) 315, 1567, 1690, 2179, 2880, 3425, 3485
HpyCH4IV ACGT 1 cut(s) 2135
HpySE526I ACGT 1 cut(s) 2135
Hsp92I GRCGYC 1 cut(s) 126
HspAI GCGC 4 cut(s) 999, 1114, 1696, 2473
KpnI GGTACC 1 cut(s) 1771
Ksp22I TGATCA 2 cut(s) 970, 2382
LmnI GCTCC 4 cut(s) 31, 2029, 2674, 3513
LweI GCATC 6 cut(s) 148, 310, 330, 1932, 2795, 3154
MabI ACCWGGT 1 cut(s) 3352
MaeI CTAG 6 cut(s) 56, 648, 1703, 2312, 2417, 2598
MaeII ACGT 1 cut(s) 2135
MaeIII GTNAC 7 cut(s) 364, 516, 1800, 2687, 2960, 2966, 3323
MflI RGATCY 4 cut(s) 1705, 2228, 2811, 3308
MhlI GDGCHC 2 cut(s) 281, 3518
MlsI TGGCCA 1 cut(s) 2705
MluNI TGGCCA 1 cut(s) 2705
MlyI GAGTC 5 cut(s) 719, 923, 2347, 2434, 2954
MmeI TCCRAC 1 cut(s) 3403
Mox20I TGGCCA 1 cut(s) 2705
MroXI GAANNNNTTC 3 cut(s) 753, 2406, 2748
MscI TGGCCA 1 cut(s) 2705
MslI CAYNNNNRTG 2 cut(s) 650, 902
Msp20I TGGCCA 1 cut(s) 2705
MspR9I CCNGG 4 cut(s) 539, 800, 2331, 3354
Mva1269I GAATGC 3 cut(s) 223, 734, 2080
MvaI CCWGG 4 cut(s) 539, 800, 2331, 3354
MvnI CGCG 2 cut(s) 999, 1698
NcoI CCATGG 1 cut(s) 1881
NdeI CATATG 1 cut(s) 3320
NlaIV GGNNCC 2 cut(s) 1769, 2015
NmeAIII GCCGAG 1 cut(s) 742
NmuCI GTSAC 4 cut(s) 364, 2960, 2966, 3323
NspI RCATGY 3 cut(s) 558, 2087, 3224
NspV TTCGAA 1 cut(s) 3163
PagI TCATGA 3 cut(s) 670, 693, 1468
PaqCI CACCTGC 1 cut(s) 1481
PciI ACATGT 2 cut(s) 554, 3220
PctI GAATGC 3 cut(s) 223, 734, 2080
PdmI GAANNNNTTC 3 cut(s) 753, 2406, 2748
PflMI CCANNNNNTGG 3 cut(s) 569, 1039, 2993
PleI GAGTC 5 cut(s) 718, 923, 2347, 2434, 2953
PpsI GAGTC 5 cut(s) 718, 923, 2347, 2434, 2953
PpuMI RGGWCCY 1 cut(s) 2014
PscI ACATGT 2 cut(s) 554, 3220
PsiI TTATAA 1 cut(s) 1728
Psp5II RGGWCCY 1 cut(s) 2014
Psp6I CCWGG 4 cut(s) 537, 798, 2329, 3352
PspFI CCCAGC 2 cut(s) 978, 1646
PspGI CCWGG 4 cut(s) 537, 798, 2329, 3352
PspN4I GGNNCC 2 cut(s) 1769, 2015
PspPI GGNCC 1 cut(s) 2014
PspPPI RGGWCCY 1 cut(s) 2014
PstI CTGCAG 4 cut(s) 286, 348, 783, 2433
PstNI CAGNNNCTG 1 cut(s) 323
PsuI RGATCY 4 cut(s) 1705, 2228, 2811, 3308
RsaI GTAC 5 cut(s) 289, 423, 1769, 2482, 3465
RsaNI GTAC 5 cut(s) 288, 422, 1768, 2481, 3464
RseI CAYNNNNRTG 2 cut(s) 650, 902
Sau96I GGNCC 1 cut(s) 2014
SchI GAGTC 5 cut(s) 719, 923, 2347, 2434, 2954
ScrFI CCNGG 4 cut(s) 539, 800, 2331, 3354
SduI GDGCHC 2 cut(s) 281, 3518
SexAI ACCWGGT 1 cut(s) 3352
SfaNI GCATC 6 cut(s) 148, 310, 330, 1932, 2795, 3154
SfcI CTRYAG 4 cut(s) 282, 344, 779, 2429
SfuI TTCGAA 1 cut(s) 3163
SinI GGWCC 1 cut(s) 2014
SmiI ATTTAAAT 1 cut(s) 2037
SmiMI CAYNNNNRTG 2 cut(s) 650, 902
SmlI CTYRAG 9 cut(s) 212, 1346, 2129, 2232, 2435, 2602, 3089, 3178, 3410
SmoI CTYRAG 9 cut(s) 212, 1346, 2129, 2232, 2435, 2602, 3089, 3178, 3410
SsiI CCGC 4 cut(s) 233, 1319, 2680, 2915
SspI AATATT 1 cut(s) 2059
SspMI CTAG 6 cut(s) 56, 648, 1703, 2312, 2417, 2598
StyD4I CCNGG 4 cut(s) 537, 798, 2329, 3352
StyI CCWWGG 2 cut(s) 1881, 2416
SwaI ATTTAAAT 1 cut(s) 2037
TaiI ACGT 1 cut(s) 2138
TaqI TCGA 7 cut(s) 206, 246, 642, 1652, 2107, 3065, 3163
TatI WGTACW 1 cut(s) 421
TauI GCSGC 2 cut(s) 1322, 2917
TscAI CASTG 5 cut(s) 2544, 2655, 2844, 3351, 3511
TseFI GTSAC 4 cut(s) 364, 2960, 2966, 3323
Tsp45I GTSAC 4 cut(s) 364, 2960, 2966, 3323
TspRI CASTG 5 cut(s) 2544, 2655, 2844, 3351, 3511
Van91I CCANNNNNTGG 3 cut(s) 569, 1039, 2993
VpaK11BI GGWCC 1 cut(s) 2014
XapI RAATTY 9 cut(s) 791, 1160, 1283, 1545, 1960, 2271, 2713, 2899, 3010
XceI RCATGY 3 cut(s) 558, 2087, 3224
XmaJI CCTAGG 1 cut(s) 2416
XmiI GTMKAC 3 cut(s) 314, 1689, 3424
XmnI GAANNNNTTC 3 cut(s) 753, 2406, 2748
XspI CTAG 6 cut(s) 56, 648, 1703, 2312, 2417, 2598
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.