Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0001514

Physical Location & Seq

Genomic Coordinates Forward (+)

15976354 .. 15981821

Gene Structure 5468 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1101800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1827 bp

ATGGAGGCCCTCCACCTCTGCCCCGCCCATTCCCCCCTCATCCGCTCCAAACGCCTCCATTCTCATCACCTCCCCAGCGGGCCGCACAACCTCAGCACCCGCCGTCCGCTCCGGCCCTTCGTTTCCGCCACCCTGTCCCGACCGACTGCCGATATTTCCGCCGAACCCTCCACCTCCGCTGCTTCATCGGAAACCATAACGAAGCCGTCTCCGCCTCCCAACCGGGTTTCCTCCAATTCGCTCCAGTACCCGCCCGGCTTCCTGGGAGCCGTGCCCGACCGTTCGGCCACGGACGGAAACGACAATGGGAACATTGTCGACGCCATGGAGTACTTGACGAACATTCTGTCGTCCAAGGTGTATGACGTGGCCATCGAATCTCCATTGGAATTGGCTACGAAGCTCTCGGAGCGATTGGGGGTGAAATTATGGATGAAAAGAGAGGACTTGCAGCCTGTTTTCTCGTTCAAGCTTCGTGGGGCTTACAACATGATGGCAAAGCTTCCAAGGGAGCAATTGGATCGAGGGGTTATTTGCTCTTCGGCCGGAAACCATGCCCAGGGAGTTGCTTTGGCTGCTAAGAAGTTGAAATGCAGTGCCGTGATTGCTATGCCCGTCACCACGCCGGAGATTAAGTGGAAGTCGGTGGAGAGATTGGGAGCCACGGTTGTTCTTATAGGGGATTCATATGACGAGGCTCAAGCTTATGCTAAGAAGCGGGCAAAGGAGGAGGTAAGGACCTTCATACCTCCTTTTGATCACCCGGATGTTATTATCGGCCAGGGCACAGTTGGGATGGAAATTATGCGCCAAACAAAGGCTCCATTGCATGCAATTTTTGTGCCTGTTGGGGGCGGTGGCCTTATAGCTGGTATTGCTGCATATGTAAAGAGGGTTGCTCCAAAGGTGAAGATTATTGGTGTGGAGCCCTCTGATGCAAATGCACTGGCATTGTCACTACATCACGGCCAGAGAATAATGTTGGACCAGGTGGGTGGTTTTGCAGATGGTGTGGCTGTGAAAGAGGTTGGTGAAGAGACCTTCCGCTTATGCAAGGACATGGTTGACGGTGTAGTTCTTGTCAGCCGCGATGCTATCTGCGGCTCAATAAAGGATATGTTTGAGGAGACAAGGAGCATTTTAGAACCGGCAGGTGCTCTTTCTCTTGCCGGTGCTGAAGCTTATTGCAAGTATTATGGTCTTAAAGGAGAAAATGTTGTTGCAATAACGAGTGGGGCAAATATGAACTTTGATAAATTGAGAGTGGTGACTGAACTTGCTAATGTTGGTCGACAACAAGAGGCTGTACTCGCAACTGTTATGCCCGAGGAGCCTGGGAGCTTTAAACATTATTGTGAACTGGTGGGCCCAATGAATATCAGTGAATTCAAATACAGACACAATTCTGATAAAGAGGCTATAGTATTGTACAGTGTTGGTGTGCATACAGCCTCTGAACTTCAAGAAATGCAAGAGCGCCTGGAGTCTTCTCAACTCAAGACTTACAATCTCACGAAAAGTGACTTAGTCAAAGATCACTTGCGTTACTTGATGGGGGGCCGATCAAATCTTCAAAATGAGATTCTTTGTCGCTTTGTCTTCCCAGAAAGACCCGGTGCTCTGATGAAGTTCTTGGACGCTTTTAGTCCACGTTGGAATATTAGTTTGTTCCACTACCGCGGAGAGGGTGAAACCGGGGCAAATGTGTTGGTTGGGATCCAAGTTCCTCAAAGCGAGATCGATGAGTTCCATGCTCGAGCCACTACTCTTGGATACGACTATGTAGTAGTGACCGATGATATTGACTTCAAGCTTTTGATGCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004794 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006549 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009081 GO:0009082 GO:0009097 GO:0009507 GO:0009536 GO:0009987 GO:0016053 GO:0016829 GO:0016840 GO:0016841 GO:0019752 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0071704 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00260 ko00290 ko01100 ko01110 ko01130 ko01200 ko01230 map00260 map00290 map01100 map01110 map01130 map01200 map01230

Pfam Domains

Protein Families

PALP Thr_dehydrat_C

Protein Analysis

609

Amino Acids

66.57

Weight (kDa)

6.67

Isoelectric Point (pI)

47.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PALP	PF00291	126 - 412	2.9e-77	Pyridoxal-phosphate dependent enzyme
Thr_dehydrat_C	PF00585	425 - 514	3.4e-22	C-terminal regulatory domain of Threonine dehydratase
Thr_dehydrat_C	PF00585	520 - 605	4.7e-23	C-terminal regulatory domain of Threonine dehydratase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001514)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10050
fragaria_vesca	FvH4_3g30040 FvH4_6g17350 FvH4_6g17350 FvH4_6g17350
malus_domestica	MD11G1153900.v1.1 MD12G1101800.v1.1 MD14G1095900.v1.1
prunus_persica	Prupe.1G149200_v2.0.a1 Prupe.6G116600_v2.0.a1 Prupe.7G044100_v2.0.a1 Prupe.7G122000_v2.0.a1
pyrus_communis	pycom11g12560 pycom11g12570 pycom12g10020
rosa_chinensis	RchiOBHm_Chr3g0471501 RchiOBHm_Chr4g0394271 RchiOBHm_Chr5g0055901
rosa_laevigata	RLG00000009710 RLG00000024173 RLG00000035019 RLG00000035020
rosa_multiflora	Rmu_co8179734.1_g000001 Rmu_sc0006582.1_g000005 Rmu_sc0006749.1_g000006
rosa_roxburghii	Rroxscaffold_1G00024450 Rroxscaffold_1G00024460 Rroxscaffold_6G00409900
rosa_rugosa	Rorug03G0118100 Rorug03G0118200 Rorug03G0118200 Rorug03G0118200 Rorug03G0368200.1 Rorug05G0295400
rosa_samantha	Rh3AG168100 Rh3BG193600 Rh3CG184100 Rh3DG181900 Rh4AG051200 Rh4BG048200 Rh4BG048400 Rh4CG055000 Rh4DG048100 Rh5AG366800 Rh5BG376900 Rh5CG400200 Rh5DG390400 Rh6BG174900
rosa_wichuraiana	Rw3G015840 Rw4G004080 Rw5G034380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1142
Acc36I	ACCTGC	1 cut(s)	1142
AccBSI	CCGCTC	2 cut(s)	45, 109
AccI	GTMKAC	2 cut(s)	318, 1291
AccII	CGCG	2 cut(s)	1089, 1680
AclWI	GGATC	3 cut(s)	528, 1711, 1724
AcoI	YGGCCR	5 cut(s)	285, 369, 543, 778, 967
AcsI	RAATTY	1 cut(s)	1385
AcuI	CTGAAG	1 cut(s)	1197
AcyI	GRCGYC	1 cut(s)	321
AfaI	GTAC	4 cut(s)	248, 332, 1308, 1430
AfiI	CCNNNNNNNGG	4 cut(s)	559, 817, 851, 1684
AgsI	TTSAA	6 cut(s)	469, 589, 1390, 1463, 1574, 1810
AjiI	CACGTC	1 cut(s)	367
AjnI	CCWGG	6 cut(s)	261, 558, 780, 987, 1333, 1479
AluBI	AGCT	8 cut(s)	403, 472, 502, 704, 869, 1181, 1341, 1813
AluI	AGCT	8 cut(s)	403, 472, 502, 704, 869, 1181, 1341, 1813
Alw21I	GWGCWC	2 cut(s)	1159, 1621
Alw26I	GTCTC	3 cut(s)	213, 1031, 1121
AlwI	GGATC	3 cut(s)	528, 1711, 1724
AlwNI	CAGNNNCTG	1 cut(s)	1454
Ama87I	CYCGRG	2 cut(s)	1325, 1755
ApaI	GGGCCC	1 cut(s)	1370
ApeKI	GCWGC	4 cut(s)	179, 451, 575, 878
ApoI	RAATTY	1 cut(s)	1385
ArsI	GACNNNNNNTTYG	2 cut(s)	332, 364
AspLEI	GCGC	2 cut(s)	810, 1479
AspS9I	GGNCC	8 cut(s)	7, 80, 114, 738, 985, 1366, 1367, 1558
AsuC2I	CCSGG	5 cut(s)	224, 255, 764, 1614, 1696
AsuHPI	GGTGA	8 cut(s)	59, 433, 610, 752, 919, 1043, 1279, 1700
AvaI	CYCGRG	2 cut(s)	1325, 1755
AvaII	GGWCC	2 cut(s)	738, 985
BaeGI	GKGCMC	3 cut(s)	276, 788, 1370
BalI	TGGCCA	1 cut(s)	371
BamHI	GGATCC	1 cut(s)	1716
BanII	GRGCYC	2 cut(s)	930, 1370
BbsI	GAAGAC	2 cut(s)	1479, 1591
Bbv12I	GWGCWC	2 cut(s)	1159, 1621
BbvCI	CCTCAGC	1 cut(s)	92
BbvI	GCAGC	4 cut(s)	166, 463, 562, 865
BccI	CCATC	5 cut(s)	380, 487, 790, 1001, 1546
BceAI	ACGGC	5 cut(s)	87, 190, 254, 584, 982
BcgI	CGANNNNNNTGC	2 cut(s)	503, 537
BciT130I	CCWGG	6 cut(s)	263, 560, 782, 989, 1335, 1481
BciVI	GTATCC	1 cut(s)	1766
BclI	TGATCA	1 cut(s)	757
BcnI	CCSGG	5 cut(s)	224, 255, 764, 1614, 1696
BcoDI	GTCTC	3 cut(s)	213, 1031, 1121
BfmI	CTRYAG	1 cut(s)	1419
BfoI	RGCGCY	1 cut(s)	1480
BfuAI	ACCTGC	1 cut(s)	1142
BfuI	GTATCC	1 cut(s)	1766
BisI	GCNGC	7 cut(s)	83, 180, 452, 576, 879, 1087, 1102
BlsI	GCNGC	7 cut(s)	84, 181, 453, 577, 880, 1088, 1103
BmcAI	AGTACT	1 cut(s)	332
Bme18I	GGWCC	2 cut(s)	738, 985
BmeT110I	CYCGRG	2 cut(s)	1325, 1755
BmgBI	CACGTC	1 cut(s)	367
BmgT120I	GGNCC	8 cut(s)	7, 80, 114, 738, 985, 1366, 1367, 1558
BmiI	GGNNCC	8 cut(s)	268, 661, 822, 927, 1332, 1368, 1559, 1718
BmsI	GCATC	3 cut(s)	925, 1081, 1809
BpiI	GAAGAC	2 cut(s)	1479, 1591
BplI	GAGNNNNNCTC	2 cut(s)	883, 915
BpmI	CTGGAG	2 cut(s)	227, 1502
Bpu10I	CCTNAGC	1 cut(s)	92
BpuEI	CTTGAG	2 cut(s)	684, 1481
BpuMI	CCSGG	5 cut(s)	224, 255, 764, 1614, 1696
Bsa29I	ATCGAT	1 cut(s)	1740
BsaHI	GRCGYC	1 cut(s)	321
BsaI	GGTCTC	1 cut(s)	1031
BsaXI	ACNNNNNCTCC	8 cut(s)	620, 650, 651, 681, 805, 835, 1200, 1230
Bsc4I	CCNNNNNNNGG	4 cut(s)	559, 817, 851, 1684
Bse118I	RCCGGY	2 cut(s)	1147, 1169
Bse1I	ACTGG	3 cut(s)	244, 951, 1365
Bse3DI	GCAATG	1 cut(s)	824
BseBI	CCWGG	6 cut(s)	263, 560, 782, 989, 1335, 1481
BseCI	ATCGAT	1 cut(s)	1740
BseGI	GGATG	4 cut(s)	39, 438, 772, 801
BseLI	CCNNNNNNNGG	4 cut(s)	559, 817, 851, 1684
BseMI	GCAATG	1 cut(s)	824
BseMII	CTCAG	1 cut(s)	106
BseNI	ACTGG	3 cut(s)	244, 951, 1365
BseRI	GAGGAG	3 cut(s)	743, 1139, 1343
BseSI	GKGCMC	3 cut(s)	276, 788, 1370
BseX3I	CGGCCG	1 cut(s)	543
BseXI	GCAGC	4 cut(s)	166, 463, 562, 865
BseYI	CCCAGC	1 cut(s)	74
Bsh1236I	CGCG	2 cut(s)	1089, 1680
Bsh1285I	CGRYCG	3 cut(s)	143, 280, 546
BshVI	ATCGAT	1 cut(s)	1740
BsiEI	CGRYCG	3 cut(s)	143, 280, 546
BsiHKAI	GWGCWC	2 cut(s)	1159, 1621
BsiHKCI	CYCGRG	2 cut(s)	1325, 1755
BslFI	GGGAC	1 cut(s)	121
BslI	CCNNNNNNNGG	4 cut(s)	559, 817, 851, 1684
BsmAI	GTCTC	3 cut(s)	213, 1031, 1121
BsmBI	CGTCTC	1 cut(s)	213
BsmFI	GGGAC	1 cut(s)	121
Bso31I	GGTCTC	1 cut(s)	1031
BsoBI	CYCGRG	2 cut(s)	1325, 1755
Bsp120I	GGGCCC	1 cut(s)	1366
Bsp1286I	GDGCHC	6 cut(s)	276, 788, 930, 1159, 1370, 1621
Bsp1407I	TGTACA	1 cut(s)	1428
Bsp143I	GATC	6 cut(s)	520, 757, 1534, 1562, 1716, 1737
Bsp19I	CCATGG	1 cut(s)	324
BspCNI	CTCAG	1 cut(s)	105
BspDI	ATCGAT	1 cut(s)	1740
BspFNI	CGCG	2 cut(s)	1089, 1680
BspLI	GGNNCC	8 cut(s)	268, 661, 822, 927, 1332, 1368, 1559, 1718
BspMI	ACCTGC	1 cut(s)	1142
BspPI	GGATC	3 cut(s)	528, 1711, 1724
BspQI	GCTCTTC	1 cut(s)	544
BspTNI	GGTCTC	1 cut(s)	1031
BsrBI	CCGCTC	2 cut(s)	45, 109
BsrDI	GCAATG	1 cut(s)	824
BsrFI	RCCGGY	2 cut(s)	1147, 1169
BsrGI	TGTACA	1 cut(s)	1428
BsrI	ACTGG	3 cut(s)	244, 951, 1365
BssAI	RCCGGY	2 cut(s)	1147, 1169
BssMI	GATC	6 cut(s)	520, 757, 1534, 1562, 1716, 1737
BssNI	GRCGYC	1 cut(s)	321
BssT1I	CCWWGG	3 cut(s)	324, 354, 506
Bst2UI	CCWGG	6 cut(s)	263, 560, 782, 989, 1335, 1481
Bst4CI	ACNGT	6 cut(s)	281, 667, 790, 1070, 1318, 1433
Bst6I	CTCTTC	2 cut(s)	544, 1029
BstACI	GRCGYC	1 cut(s)	321
BstAUI	TGTACA	1 cut(s)	1428
BstC8I	GCNNGC	3 cut(s)	80, 720, 831
BstDEI	CTNAG	4 cut(s)	92, 579, 711, 1525
BstDSI	CCRYGG	4 cut(s)	288, 324, 663, 1678
BstF5I	GGATG	4 cut(s)	39, 438, 772, 801
BstFNI	CGCG	2 cut(s)	1089, 1680
BstH2I	RGCGCY	1 cut(s)	1480
BstHHI	GCGC	2 cut(s)	810, 1479
BstKTI	GATC	6 cut(s)	523, 760, 1537, 1565, 1719, 1740
BstMAI	GTCTC	3 cut(s)	213, 1031, 1121
BstMBI	GATC	6 cut(s)	520, 757, 1534, 1562, 1716, 1737
BstMCI	CGRYCG	3 cut(s)	143, 280, 546
BstMWI	GCNNNNNNNGC	9 cut(s)	51, 211, 409, 575, 605, 875, 1310, 1330, 1819
BstNI	CCWGG	6 cut(s)	263, 560, 782, 989, 1335, 1481
BstNSI	RCATGY	1 cut(s)	833
BstSFI	CTRYAG	1 cut(s)	1419
BstSLI	GKGCMC	3 cut(s)	276, 788, 1370
BstUI	CGCG	2 cut(s)	1089, 1680
BstV1I	GCAGC	4 cut(s)	166, 463, 562, 865
BstV2I	GAAGAC	2 cut(s)	1479, 1591
BstX2I	RGATCY	1 cut(s)	1716
BstXI	CCANNNNNNTGG	1 cut(s)	995
BstYI	RGATCY	1 cut(s)	1716
BstZI	CGGCCG	1 cut(s)	543
Bsu15I	ATCGAT	1 cut(s)	1740
BsuI	GTATCC	1 cut(s)	1766
BsuTUI	ATCGAT	1 cut(s)	1740
BtgI	CCRYGG	4 cut(s)	288, 324, 663, 1678
BtgZI	GCGATG	1 cut(s)	1104
BtrI	CACGTC	1 cut(s)	367
BtsCI	GGATG	4 cut(s)	39, 438, 772, 801
BtsI	GCAGTG	1 cut(s)	601
BtsIMutI	CAGTG	4 cut(s)	601, 944, 1387, 1438
BveI	ACCTGC	1 cut(s)	1142
Cac8I	GCNNGC	3 cut(s)	80, 720, 831
CaiI	CAGNNNCTG	1 cut(s)	1454
CfoI	GCGC	2 cut(s)	810, 1479
Cfr10I	RCCGGY	2 cut(s)	1147, 1169
Cfr13I	GGNCC	8 cut(s)	7, 80, 114, 738, 985, 1366, 1367, 1558
Cfr42I	CCGCGG	1 cut(s)	1681
ClaI	ATCGAT	1 cut(s)	1740
CseI	GACGC	2 cut(s)	329, 1646
CsiI	ACCWGGT	1 cut(s)	987
Csp6I	GTAC	4 cut(s)	247, 331, 1307, 1429
CspCI	CAANNNNNGTGG	4 cut(s)	457, 492, 1750, 1785
CviAII	CATG	6 cut(s)	325, 490, 554, 830, 1060, 1751
CviQI	GTAC	4 cut(s)	247, 331, 1307, 1429
DdeI	CTNAG	4 cut(s)	92, 579, 711, 1525
DpnI	GATC	6 cut(s)	522, 759, 1536, 1564, 1718, 1739
DpnII	GATC	6 cut(s)	520, 757, 1534, 1562, 1716, 1737
DraI	TTTAAA	1 cut(s)	1345
EaeI	YGGCCR	5 cut(s)	285, 369, 543, 778, 967
EagI	CGGCCG	1 cut(s)	543
Eam1104I	CTCTTC	2 cut(s)	544, 1029
EarI	CTCTTC	2 cut(s)	544, 1029
EciI	GGCGGA	3 cut(s)	115, 148, 201
EclXI	CGGCCG	1 cut(s)	543
Eco130I	CCWWGG	3 cut(s)	324, 354, 506
Eco24I	GRGCYC	2 cut(s)	930, 1370
Eco31I	GGTCTC	1 cut(s)	1031
Eco47I	GGWCC	2 cut(s)	738, 985
Eco52I	CGGCCG	1 cut(s)	543
Eco57I	CTGAAG	1 cut(s)	1197
Eco88I	CYCGRG	2 cut(s)	1325, 1755
EcoO109I	RGGNCCY	2 cut(s)	7, 738
EcoRI	GAATTC	1 cut(s)	1385
EcoRII	CCWGG	6 cut(s)	261, 558, 780, 987, 1333, 1479
EcoT14I	CCWWGG	3 cut(s)	324, 354, 506
EcoT22I	ATGCAT	1 cut(s)	1824
EcoT38I	GRGCYC	2 cut(s)	930, 1370
ErhI	CCWWGG	3 cut(s)	324, 354, 506
Esp3I	CGTCTC	1 cut(s)	213
FaeI	CATG	6 cut(s)	328, 493, 557, 833, 1063, 1754
FaqI	GGGAC	1 cut(s)	121
FatI	CATG	6 cut(s)	324, 489, 553, 829, 1059, 1750
FauI	CCCGC	5 cut(s)	31, 71, 107, 258, 711
FauNDI	CATATG	2 cut(s)	688, 883
FbaI	TGATCA	1 cut(s)	757
FblI	GTMKAC	2 cut(s)	318, 1291
Fnu4HI	GCNGC	7 cut(s)	83, 180, 452, 576, 879, 1087, 1102
FokI	GGATG	4 cut(s)	26, 445, 779, 808
FriOI	GRGCYC	2 cut(s)	930, 1370
Fsp4HI	GCNGC	7 cut(s)	83, 180, 452, 576, 879, 1087, 1102
GlaI	GCGC	2 cut(s)	809, 1478
GluI	GCNGC	7 cut(s)	83, 180, 452, 576, 879, 1087, 1102
GsaI	CCCAGC	1 cut(s)	78
GsuI	CTGGAG	2 cut(s)	227, 1502
HaeII	RGCGCY	1 cut(s)	1480
HgaI	GACGC	2 cut(s)	329, 1646
HhaI	GCGC	2 cut(s)	810, 1479
Hin1I	GRCGYC	1 cut(s)	321
Hin1II	CATG	6 cut(s)	328, 493, 557, 833, 1063, 1754
Hin6I	GCGC	2 cut(s)	808, 1477
HinP1I	GCGC	2 cut(s)	808, 1477
HincII	GTYRAC	3 cut(s)	319, 1066, 1292
HindII	GTYRAC	3 cut(s)	319, 1066, 1292
HindIII	AAGCTT	5 cut(s)	470, 500, 702, 1179, 1811
HinfI	GANTC	4 cut(s)	377, 683, 1484, 1582
HphI	GGTGA	8 cut(s)	59, 433, 610, 752, 919, 1043, 1279, 1700
Hpy166II	GTNNAC	5 cut(s)	319, 1066, 1292, 1358, 1649
Hpy188I	TCNGA	6 cut(s)	190, 409, 934, 1408, 1456, 1623
Hpy188III	TCNNGA	4 cut(s)	138, 1463, 1498, 1513
Hpy8I	GTNNAC	5 cut(s)	319, 1066, 1292, 1358, 1649
Hpy99I	CGWCG	1 cut(s)	323
HpyAV	CCTTC	3 cut(s)	127, 751, 1051
HpyCH4III	ACNGT	6 cut(s)	281, 667, 790, 1070, 1318, 1433
HpyCH4IV	ACGT	2 cut(s)	366, 1651
HpyF10VI	GCNNNNNNNGC	9 cut(s)	51, 211, 409, 575, 605, 875, 1310, 1330, 1819
HpyF3I	CTNAG	4 cut(s)	92, 579, 711, 1525
HpySE526I	ACGT	2 cut(s)	366, 1651
Hsp92I	GRCGYC	1 cut(s)	321
Hsp92II	CATG	6 cut(s)	328, 493, 557, 833, 1063, 1754
HspAI	GCGC	2 cut(s)	808, 1477
Ksp22I	TGATCA	1 cut(s)	757
KspI	CCGCGG	1 cut(s)	1681
Kzo9I	GATC	6 cut(s)	520, 757, 1534, 1562, 1716, 1737
LguI	GCTCTTC	1 cut(s)	544
Lsp1109I	GCAGC	4 cut(s)	166, 463, 562, 865
LweI	GCATC	3 cut(s)	925, 1081, 1809
MabI	ACCWGGT	1 cut(s)	987
MaeII	ACGT	2 cut(s)	366, 1651
MaeIII	GTNAC	6 cut(s)	616, 954, 1267, 1520, 1544, 1789
MalI	GATC	6 cut(s)	522, 759, 1536, 1564, 1718, 1739
MbiI	CCGCTC	2 cut(s)	45, 109
MboI	GATC	6 cut(s)	520, 757, 1534, 1562, 1716, 1737
MboII	GAAGA	6 cut(s)	531, 922, 1046, 1479, 1562, 1591
MfeI	CAATTG	1 cut(s)	515
MflI	RGATCY	1 cut(s)	1716
MhlI	GDGCHC	6 cut(s)	276, 788, 930, 1159, 1370, 1621
MlsI	TGGCCA	1 cut(s)	371
MluCI	AATT	9 cut(s)	235, 389, 425, 515, 801, 834, 1256, 1385, 1402
MluNI	TGGCCA	1 cut(s)	371
MlyI	GAGTC	1 cut(s)	1493
MmeI	TCCRAC	2 cut(s)	963, 1634
Mox20I	TGGCCA	1 cut(s)	371
Mph1103I	ATGCAT	1 cut(s)	1824
MscI	TGGCCA	1 cut(s)	371
MseI	TTAA	3 cut(s)	633, 1203, 1344
MslI	CAYNNNNRTG	2 cut(s)	765, 1353
Msp20I	TGGCCA	1 cut(s)	371
MspA1I	CMGCKG	3 cut(s)	78, 179, 1680
MunI	CAATTG	1 cut(s)	515
MvaI	CCWGG	6 cut(s)	263, 560, 782, 989, 1335, 1481
MvnI	CGCG	2 cut(s)	1089, 1680
MwoI	GCNNNNNNNGC	9 cut(s)	51, 211, 409, 575, 605, 875, 1310, 1330, 1819
NciI	CCSGG	5 cut(s)	224, 255, 764, 1614, 1696
NcoI	CCATGG	1 cut(s)	324
NdeI	CATATG	2 cut(s)	688, 883
NdeII	GATC	6 cut(s)	520, 757, 1534, 1562, 1716, 1737
NlaIII	CATG	6 cut(s)	328, 493, 557, 833, 1063, 1754
NlaIV	GGNNCC	8 cut(s)	268, 661, 822, 927, 1332, 1368, 1559, 1718
NmuCI	GTSAC	5 cut(s)	616, 954, 1267, 1520, 1789
NsiI	ATGCAT	1 cut(s)	1824
NspI	RCATGY	1 cut(s)	833
PaeI	GCATGC	1 cut(s)	833
PaeR7I	CTCGAG	1 cut(s)	1755
PaqCI	CACCTGC	1 cut(s)	1142
PasI	CCCWGGG	1 cut(s)	559
PciSI	GCTCTTC	1 cut(s)	544
PcsI	WCGNNNNNNNCGW	1 cut(s)	372
PfeI	GAWTC	3 cut(s)	377, 683, 1582
PflFI	GACNNNGTC	1 cut(s)	1526
PkrI	GCNGC	7 cut(s)	84, 181, 453, 577, 880, 1088, 1103
PleI	GAGTC	1 cut(s)	1492
PpsI	GAGTC	1 cut(s)	1492
PpuMI	RGGWCCY	1 cut(s)	738
Psp5II	RGGWCCY	1 cut(s)	738
Psp6I	CCWGG	6 cut(s)	261, 558, 780, 987, 1333, 1479
PspFI	CCCAGC	1 cut(s)	74
PspGI	CCWGG	6 cut(s)	261, 558, 780, 987, 1333, 1479
PspN4I	GGNNCC	8 cut(s)	268, 661, 822, 927, 1332, 1368, 1559, 1718
PspOMI	GGGCCC	1 cut(s)	1366
PspPI	GGNCC	8 cut(s)	7, 80, 114, 738, 985, 1366, 1367, 1558
PspPPI	RGGWCCY	1 cut(s)	738
PspXI	VCTCGAGB	1 cut(s)	1755
PstNI	CAGNNNCTG	1 cut(s)	1454
PsuI	RGATCY	1 cut(s)	1716
PsyI	GACNNNGTC	1 cut(s)	1526
RsaI	GTAC	4 cut(s)	248, 332, 1308, 1430
RsaNI	GTAC	4 cut(s)	247, 331, 1307, 1429
RseI	CAYNNNNRTG	2 cut(s)	765, 1353
SacII	CCGCGG	1 cut(s)	1681
SalI	GTCGAC	2 cut(s)	317, 1290
SapI	GCTCTTC	1 cut(s)	544
SaqAI	TTAA	3 cut(s)	633, 1203, 1344
SatI	GCNGC	7 cut(s)	83, 180, 452, 576, 879, 1087, 1102
Sau3AI	GATC	6 cut(s)	520, 757, 1534, 1562, 1716, 1737
Sau96I	GGNCC	8 cut(s)	7, 80, 114, 738, 985, 1366, 1367, 1558
ScaI	AGTACT	1 cut(s)	332
SchI	GAGTC	1 cut(s)	1493
SduI	GDGCHC	6 cut(s)	276, 788, 930, 1159, 1370, 1621
SexAI	ACCWGGT	1 cut(s)	987
SfaNI	GCATC	3 cut(s)	925, 1081, 1809
SfcI	CTRYAG	1 cut(s)	1419
Sfr274I	CTCGAG	1 cut(s)	1755
Sfr303I	CCGCGG	1 cut(s)	1681
SgrBI	CCGCGG	1 cut(s)	1681
SinI	GGWCC	2 cut(s)	738, 985
SlaI	CTCGAG	1 cut(s)	1755
SmiMI	CAYNNNNRTG	2 cut(s)	765, 1353
SmlI	CTYRAG	3 cut(s)	699, 1496, 1755
SmoI	CTYRAG	3 cut(s)	699, 1496, 1755
SphI	GCATGC	1 cut(s)	833
Sse9I	AATT	9 cut(s)	235, 389, 425, 515, 801, 834, 1256, 1385, 1402
SspI	AATATT	1 cut(s)	1660
StyI	CCWWGG	3 cut(s)	324, 354, 506
TaaI	ACNGT	6 cut(s)	281, 667, 790, 1070, 1318, 1433
TaiI	ACGT	2 cut(s)	369, 1654
TaqI	TCGA	6 cut(s)	318, 375, 523, 1291, 1740, 1756
TaqII	GACCGA	2 cut(s)	157, 1808
TasI	AATT	9 cut(s)	235, 389, 425, 515, 801, 834, 1256, 1385, 1402
TatI	WGTACW	3 cut(s)	330, 1306, 1428
TauI	GCSGC	3 cut(s)	85, 1089, 1104
TfiI	GAWTC	3 cut(s)	377, 683, 1582
Tru1I	TTAA	3 cut(s)	633, 1203, 1344
Tru9I	TTAA	3 cut(s)	633, 1203, 1344
TscAI	CASTG	4 cut(s)	601, 951, 1387, 1438
TseFI	GTSAC	5 cut(s)	616, 954, 1267, 1520, 1789
TseI	GCWGC	4 cut(s)	179, 451, 575, 878
Tsp45I	GTSAC	5 cut(s)	616, 954, 1267, 1520, 1789
TspDTI	ATGAA	7 cut(s)	174, 449, 675, 733, 1259, 1388, 1640
TspGWI	ACGGA	2 cut(s)	305, 309
TspRI	CASTG	4 cut(s)	601, 951, 1387, 1438
Tth111I	GACNNNGTC	1 cut(s)	1526
VpaK11BI	GGWCC	2 cut(s)	738, 985
XapI	RAATTY	1 cut(s)	1385
XceI	RCATGY	1 cut(s)	833
XcmI	CCANNNNNNNNNTGG	1 cut(s)	788
XhoI	CTCGAG	1 cut(s)	1755
XmiI	GTMKAC	2 cut(s)	318, 1291
ZrmI	AGTACT	1 cut(s)	332
Zsp2I	ATGCAT	1 cut(s)	1824

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.