MD13G1162600.v1.1

phospholipase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
Physical Location & Seq
Reverse (-)
12810401 .. 12818176
7776 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1162600.v1.1.491

Sequence Viewer

Length: 3327 bp
ATGGAATCGGAGCAGTTAATCTCCGGGGGCGGATCCCGCTACCTCCAAATGCGATCGGAGTCGGCCATGTCGCCCTCCTCCTTTCTCTGCCGTCTCTCGTCCTTCGAGCCCGCTCGGATTTTCGACGAGTTGCCCAGCGCCACCATCGTCTCCGTCTCCCGTCCCGACGCCGGCGATATCAGCCCCGTGCTTCTCTCGTACACCATCGAGTTCCAATACAAGCAGTTTAAGTGGCGATTAGTGAAGAAACCATCACATGTATTCTTCTTGCATTTCGCATTGAAGAAGCGTGCATTTTTTGAGGAAATTCAAGAGAAGCAAGAGCAGGTTAAAGAATGGCTTCAAAATCTAGGAATAGGAGATCACACTGATGTGGTGCAAGATGATGAGGATGATGAGACTGTTCCCCTGCAGCACGATGAAAGCGCTAAAAACAGAGATGTTCCATCTAGCGCTGCTCTGCCAATCATCCGGCCAGCGCTGGGTAGGGAGCAATCCATTTCGGAGAGATCTAAGGTTGCAATGCAAGGGTATCTAAACCACTTTCTAGGAAACATGGACATTGTGAACTCTCGAGAGGTCTGCAAGTTCCTGGAGGTCTCTATGTTATCATTTTCTCCAGAATATGGCCCTAAGCTAAAAGAAGACTATGTGATGGTCAAGCATCTTCCGAAAATTCCGAAGGATGATACTACCAGGAAATGTTGTGCATGTCGTTGGTTCAATTGCTGTAATGACAATTGGCAAAAGGTTTGGGCTGTATTAAAACCAGGATTCTTGGCCTTGCTGGCGCATCCTTTTGATACCCAACCTTTAGATATAATAGTATTTGATGTACTACCAACCTCAGATGGCAATGGGGATGGCCGGGTATCACTGGCAAAAGAAATAAAAGAGCGGAATCCTTTACGGCATACATTTAAGGTGGCTTGTGGAAGCCGGAGCATTAATTTGAGAGTTAAGAGTGGTTCCAAAGTAAAAGATTGGGTTGCCTCAATCAATGATGCTGGACTTAGGCCTCCAGAGGGCTGGTGTCATCCTCACCGCTTTGGCTCTTTTGCACCTCCGAGAGGCTTGACTGACGATGGCAGTCAGGCTCAATGGTTTATAGATGGTCAGTCAGCATTTGAAGCTATTGCTTCTGCAATTGAGGATGCAAAATCAGAGATATTTATTTGTGGCTGGTGGCTGTGTCCAGAACTGTACCTGCGGCGTCCATTTCATGCTCATGCTTCTTCTAGACTTGATTCTTTACTGGAAGAAAAAGCTAAGGAAGGGGTTCAGATATACATTCTTCTCTATAAAGAGGTAGCTCTTGCTCTGAAAATCAACAGTGTTTATAGCAAGAGAAAACTACTCGGGATTCATGAGAATGTGAGGGTACTACGTTATCCTGACCACTTCTCAAGTGGTGTTTACTTATGGTCCCACCATGAAAAACTTGTCATTGTTGATTATCAGATTTGCTTTCTTGGAGGACTGGATTTATGCTTTGGTCGTTACGATACTGCTGAGCATAAAGTGGGTGATTGCCCTCCTTCGATATGGCCTGGAAAAGACTATTACAACCCAAGGGAATCTGAACCAAATTCGTGGGAGGATACAATGAAAGATGAGTTGGATCGTGGAAAATATCCTCGTATGCCTTGGCATGACGTTCACTGTGCCCTTTGGGGACCACCCTGCCGTGATGTGGCTAGACATTTTGTTCAGCGCTGGAACTATGCAAAGAGAAATAAGGCTCCAAACGAACAAGCAATTCCACTACTTATGCCGCAGCACCACATGGTCATTCCTCATTACATGGGAAGAAGCCAAGAGGTGGAGATTGAAAGTAAGAACGCTAATAATCACAAAGAGCATAAAAGGACGGATTCCTTCTCGTCGATATCATCCTGTCAAGATATTCCACTTCTTATACCCCAAGAAGCTGATGGGCTGGATTCTCCAAATGAACACACAAAACTAAATGGGATGGACTCTCCCCATGATCTCCTTGATCAGCCAAGCAGGGTTAGCAACAATCTTGCTTTCCCTTTCCGGAAGTTAAAAATTCCACCAGTAGGTCCTGATACGCCAATGAGAGGCTTTGTAGATGACCTAGATTCTCTGTCTCGACACGGAAAAATGGCTTCTGACGGGGTGGCACAGTCTGGCATGAAAGATCCAGAGTGGTGGGAAACACAAGAACGGGGCAACAAGGGTGGTTTCACAGATGAATCGGGACAAGTTGGCCCTTGTTGCTCGTGTCGATGTCAGGTTATTAGAAGCGTCAGTCAGTGGTCAGCAGGAACAAGCCAAGTTGAAGAGAGCATTCACAATGCTTATTGCTCTCTAATCGACAAATCAGAGCACTTTATTTACATTGAGAACCAATTTTTCATATCAGGTCTTTCAGGAGATGAAATTATACGGAATCGTGTTTTAGAAGCATTATTTCGCCGTATCATGCGAGCATACAATGATAAAAAGCCTTTTAGAGTTATAATTGTGATACCGCTTATACCCGGCTTCCAGGGGGGTCTGGATGATGCTGGTGCAGCATCTGTAAGAGCTGTTATGCATTGGCAATATCGAACCATTTGCAGAGGACATAATTCAATATTGCACAATCTTAATGAAATTCTTGGTGCAAAGATGCATGATTATATTTCCTTCTATGGCCTTAGATCTTATGGTAAACTCTTTGAAGGCGGTCCGTTGGCCTGTAGTCAGATCTATGTGCATAGTAAAATTATGATTGTCGATGATTGCACAACTCTAATTGGATCAGCTAACATCAATGATAGGAGTTTGCTTGGTTCAAGAGATTCTGAGATTGGTCTACTTATTGAAGATAAAGAGATGATTAATTCATTTATGGGAGGAAAGCCATGGAAGGCTGGAAAGTTTTCATTGAGTCTTCGCATGTCACTGTGGTCTGAACACCTCGGTATTCGTGCCACAGAGATGAATCAAATAATCGACCCAATTGTCGATTCAACTTATAAGGACATCTGGATGGCAACTGCAAAGACAAATACCACAATCTACCAAGATGTGTTTTCTTGCATACCAAACGATTTTATACATTCCAGGGCTGCATTCAGGCAAAGTATAGCCTTCTGGAAGGAGAAAATTGGGCACACAACTATCGACTTGGGAATTGCTCCCGAGAAGATAGAATCATATCAAAATGGAGATGTGAAGACAGCAGAACCCATGGAGAGGTTAGAATCTGTGAAGGGCCATCTGGTTTCTTTTCCTTTGGATTTCATGTTGAAGGAAGATCTACGACCTGTGTTCAATGAAAGTGAGTATTACGCGTCTCCTCAAGTATTTCATTGA

Protein Analysis

1109

Amino Acids

125.9

Weight (kDa)

6.26

Isoelectric Point (pI)

49.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PLDc PF00614 473 - 500 3.9e-06 Phospholipase D Active site motif
PLDc PF00614 905 - 931 1.1e-06 Phospholipase D Active site motif
PLDc_2 PF13091 906 - 952 5.7e-08 PLD-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2486, 2988
AasI GACNNNNNNGTC 1 cut(s) 2972
Acc36I ACCTGC 2 cut(s) 316, 1215
AccB7I CCANNNNNTGG 2 cut(s) 626, 1822
AccBSI CCGCTC 2 cut(s) 113, 898
AccI GTMKAC 1 cut(s) 2824
AccII CGCG 1 cut(s) 3305
AccIII TCCGGA 1 cut(s) 2040
AciI CCGC 9 cut(s) 30, 37, 111, 898, 1045, 1210, 1775, 2498, 2694
AclWI GGATC 5 cut(s) 27, 40, 1629, 2159, 2776
AcoI YGGCCR 3 cut(s) 63, 473, 865
AcsI RAATTY 5 cut(s) 306, 675, 1588, 2052, 2622
AcyI GRCGYC 2 cut(s) 168, 1213
AfaI GTAC 4 cut(s) 200, 837, 1205, 1383
AfeI AGCGCT 4 cut(s) 427, 454, 480, 1715
AflIII ACRYGT 2 cut(s) 256, 3303
AjnI CCWGG 6 cut(s) 591, 695, 769, 1549, 2514, 3074
AjuI GAANNNNNNNTTGG 4 cut(s) 1601, 1633, 2962, 2994
AleI CACNNNNGTG 1 cut(s) 371
AluBI AGCT 7 cut(s) 637, 1133, 1268, 1313, 1931, 2555, 2774
AluI AGCT 7 cut(s) 637, 1133, 1268, 1313, 1931, 2555, 2774
Alw21I GWGCWC 1 cut(s) 2355
Alw26I GTCTC 7 cut(s) 98, 154, 160, 392, 604, 2118, 3312
AlwI GGATC 5 cut(s) 27, 40, 1629, 2159, 2776
AlwNI CAGNNNCTG 1 cut(s) 2546
Ama87I CYCGRG 3 cut(s) 573, 1358, 3152
Aor13HI TCCGGA 1 cut(s) 2040
Aor51HI AGCGCT 4 cut(s) 427, 454, 480, 1715
ApeKI GCWGC 5 cut(s) 412, 455, 1777, 2540, 3080
ApoI RAATTY 5 cut(s) 306, 675, 1588, 2052, 2622
AseI ATTAAT 2 cut(s) 948, 2850
Asp700I GAANNNNTTC 3 cut(s) 339, 1278, 2890
AspLEI GCGC 6 cut(s) 140, 428, 455, 481, 793, 1716
AspS9I GGNCC 7 cut(s) 629, 1425, 1676, 2066, 2234, 2696, 3226
AsuC2I CCSGG 3 cut(s) 25, 869, 2508
AsuHPI GGTGA 2 cut(s) 1034, 1538
AvaI CYCGRG 3 cut(s) 573, 1358, 3152
AvaII GGWCC 4 cut(s) 1425, 1676, 2066, 2696
BaeGI GKGCMC 2 cut(s) 1669, 3126
BamHI GGATCC 1 cut(s) 32
BanII GRGCYC 1 cut(s) 111
BauI CACGAG 1 cut(s) 2245
BbsI GAAGAC 3 cut(s) 651, 2894, 3194
Bbv12I GWGCWC 1 cut(s) 2355
BbvI GCAGC 5 cut(s) 424, 442, 1789, 2552, 3067
BceAI ACGGC 4 cut(s) 75, 926, 1671, 2427
BcgI CGANNNNNNTGC 4 cut(s) 564, 598, 2565, 2599
BciT130I CCWGG 6 cut(s) 593, 697, 771, 1551, 2516, 3076
BciVI GTATCC 1 cut(s) 1594
BclI TGATCA 1 cut(s) 1999
BcnI CCSGG 3 cut(s) 25, 869, 2508
BcoDI GTCTC 7 cut(s) 98, 154, 160, 392, 604, 2118, 3312
BfaI CTAG 6 cut(s) 350, 450, 548, 1239, 1698, 2102
BfmI CTRYAG 2 cut(s) 410, 2707
BfoI RGCGCY 5 cut(s) 141, 429, 456, 482, 1717
BfuAI ACCTGC 2 cut(s) 316, 1215
BfuI GTATCC 1 cut(s) 1594
BglI GCCNNNNNGGC 1 cut(s) 788
BglII AGATCT 4 cut(s) 509, 2669, 2715, 3268
BisI GCNGC 7 cut(s) 413, 456, 1211, 1775, 1778, 2541, 3081
BlpI GCTNAGC 1 cut(s) 1512
BlsI GCNGC 7 cut(s) 414, 457, 1212, 1776, 1779, 2542, 3082
Bme1390I CCNGG 9 cut(s) 25, 593, 697, 771, 869, 1551, 2508, 2516, 3076
Bme18I GGWCC 4 cut(s) 1425, 1676, 2066, 2696
BmeT110I CYCGRG 3 cut(s) 573, 1358, 3152
BmgT120I GGNCC 7 cut(s) 629, 1425, 1676, 2066, 2234, 2696, 3226
BmiI GGNNCC 5 cut(s) 34, 970, 1427, 1677, 1743
BmrFI CCNGG 9 cut(s) 25, 593, 697, 771, 869, 1551, 2508, 2516, 3076
BmsI GCATC 7 cut(s) 673, 802, 994, 1144, 2521, 2552, 2628
BpiI GAAGAC 3 cut(s) 651, 2894, 3194
BpmI CTGGAG 3 cut(s) 603, 614, 1005
Bpu10I CCTNAGC 2 cut(s) 633, 1269
Bpu1102I GCTNAGC 1 cut(s) 1512
BpuEI CTTGAG 2 cut(s) 1390, 3297
BpuMI CCSGG 3 cut(s) 25, 869, 2508
BsaHI GRCGYC 2 cut(s) 168, 1213
BsaI GGTCTC 1 cut(s) 604
BsaJI CCNNGG 8 cut(s) 24, 1571, 1646, 2515, 2873, 2929, 3075, 3201
BsaWI WCCGGW 1 cut(s) 2040
Bse118I RCCGGY 1 cut(s) 170
Bse1I ACTGG 4 cut(s) 882, 1260, 1485, 2060
Bse3DI GCAATG 2 cut(s) 528, 862
BseAI TCCGGA 1 cut(s) 2040
BseBI CCWGG 6 cut(s) 593, 697, 771, 1551, 2516, 3076
BseDI CCNNGG 8 cut(s) 24, 1571, 1646, 2515, 2873, 2929, 3075, 3201
BseMI GCAATG 2 cut(s) 528, 862
BseMII CTCAG 3 cut(s) 861, 1503, 2805
BseNI ACTGG 4 cut(s) 882, 1260, 1485, 2060
BseRI GAGGAG 2 cut(s) 67, 3300
BseSI GKGCMC 2 cut(s) 1669, 3126
BseXI GCAGC 5 cut(s) 424, 442, 1789, 2552, 3067
BseYI CCCAGC 2 cut(s) 134, 481
BsgI GTGCAG 1 cut(s) 2559
Bsh1236I CGCG 1 cut(s) 3305
Bsh1285I CGRYCG 1 cut(s) 56
BsiEI CGRYCG 1 cut(s) 56
BsiHKAI GWGCWC 1 cut(s) 2355
BsiHKCI CYCGRG 3 cut(s) 573, 1358, 3152
BsiSI CCGG 7 cut(s) 24, 171, 472, 868, 940, 2041, 2508
BslFI GGGAC 4 cut(s) 147, 1411, 1689, 2238
BsmAI GTCTC 7 cut(s) 98, 154, 160, 392, 604, 2118, 3312
BsmBI CGTCTC 4 cut(s) 98, 154, 160, 3312
BsmFI GGGAC 4 cut(s) 147, 1411, 1689, 2238
BsmI GAATGC 2 cut(s) 2313, 3083
Bso31I GGTCTC 1 cut(s) 604
BsoBI CYCGRG 3 cut(s) 573, 1358, 3152
Bsp1286I GDGCHC 4 cut(s) 111, 1669, 2355, 3126
Bsp13I TCCGGA 1 cut(s) 2040
Bsp1720I GCTNAGC 1 cut(s) 1512
Bsp19I CCATGG 2 cut(s) 2873, 3201
BspACI CCGC 9 cut(s) 30, 37, 111, 898, 1045, 1210, 1775, 2498, 2694
BspCNI CTCAG 3 cut(s) 860, 1504, 2806
BspEI TCCGGA 1 cut(s) 2040
BspFNI CGCG 1 cut(s) 3305
BspHI TCATGA 1 cut(s) 1366
BspLI GGNNCC 5 cut(s) 34, 970, 1427, 1677, 1743
BspMAI CTGCAG 1 cut(s) 414
BspMI ACCTGC 2 cut(s) 316, 1215
BspPI GGATC 5 cut(s) 27, 40, 1629, 2159, 2776
BspTNI GGTCTC 1 cut(s) 604
BsrBI CCGCTC 2 cut(s) 113, 898
BsrDI GCAATG 2 cut(s) 528, 862
BsrFI RCCGGY 1 cut(s) 170
BsrI ACTGG 4 cut(s) 882, 1260, 1485, 2060
BssAI RCCGGY 1 cut(s) 170
BssECI CCNNGG 8 cut(s) 24, 1571, 1646, 2515, 2873, 2929, 3075, 3201
BssNI GRCGYC 2 cut(s) 168, 1213
BssSI CACGAG 1 cut(s) 2245
BssT1I CCWWGG 4 cut(s) 1571, 1646, 2873, 3201
Bst2BI CACGAG 1 cut(s) 2245
Bst2UI CCWGG 6 cut(s) 593, 697, 771, 1551, 2516, 3076
Bst4CI ACNGT 6 cut(s) 403, 1203, 1334, 1664, 2151, 2916
Bst6I CTCTTC 1 cut(s) 2301
BstACI GRCGYC 2 cut(s) 168, 1213
BstC8I GCNNGC 6 cut(s) 111, 172, 291, 477, 789, 2454
BstDEI CTNAG 8 cut(s) 513, 633, 847, 1013, 1269, 1512, 2666, 2814
BstDSI CCRYGG 2 cut(s) 2873, 3201
BstENI CCTNNNNNAGG 1 cut(s) 1068
BstFNI CGCG 1 cut(s) 3305
BstH2I RGCGCY 5 cut(s) 141, 429, 456, 482, 1717
BstHHI GCGC 6 cut(s) 140, 428, 455, 481, 793, 1716
BstMAI GTCTC 7 cut(s) 98, 154, 160, 392, 604, 2118, 3312
BstMCI CGRYCG 1 cut(s) 56
BstMWI GCNNNNNNNGC 7 cut(s) 36, 180, 788, 1130, 2016, 2241, 2540
BstNI CCWGG 6 cut(s) 593, 697, 771, 1551, 2516, 3076
BstNSI RCATGY 3 cut(s) 260, 714, 2911
BstSCI CCNGG 9 cut(s) 23, 591, 695, 769, 867, 1549, 2506, 2514, 3074
BstSFI CTRYAG 2 cut(s) 410, 2707
BstSLI GKGCMC 2 cut(s) 1669, 3126
BstUI CGCG 1 cut(s) 3305
BstV1I GCAGC 5 cut(s) 424, 442, 1789, 2552, 3067
BstV2I GAAGAC 3 cut(s) 651, 2894, 3194
BstX2I RGATCY 6 cut(s) 32, 509, 2164, 2669, 2715, 3268
BstXI CCANNNNNNTGG 3 cut(s) 1029, 1593, 2175
BstYI RGATCY 6 cut(s) 32, 509, 2164, 2669, 2715, 3268
BsuI GTATCC 1 cut(s) 1594
BtgI CCRYGG 2 cut(s) 2873, 3201
BtsIMutI CAGTG 6 cut(s) 366, 875, 1339, 1660, 2285, 2912
BveI ACCTGC 2 cut(s) 316, 1215
Cac8I GCNNGC 6 cut(s) 111, 172, 291, 477, 789, 2454
CaiI CAGNNNCTG 1 cut(s) 2546
CciI TCATGA 1 cut(s) 1366
CfoI GCGC 6 cut(s) 140, 428, 455, 481, 793, 1716
Cfr10I RCCGGY 1 cut(s) 170
Cfr13I GGNCC 7 cut(s) 629, 1425, 1676, 2066, 2234, 2696, 3226
CpoI CGGWCCG 1 cut(s) 2696
CseI GACGC 4 cut(s) 176, 1202, 2260, 3294
Csp6I GTAC 4 cut(s) 199, 836, 1204, 1382
CspCI CAANNNNNGTGG 2 cut(s) 2185, 2220
CspI CGGWCCG 1 cut(s) 2696
CviQI GTAC 4 cut(s) 199, 836, 1204, 1382
DdeI CTNAG 8 cut(s) 513, 633, 847, 1013, 1269, 1512, 2666, 2814
DrdI GACNNNNNNGTC 1 cut(s) 2972
DseDI GACNNNNNNGTC 1 cut(s) 2972
EaeI YGGCCR 3 cut(s) 63, 473, 865
Eam1104I CTCTTC 1 cut(s) 2301
EarI CTCTTC 1 cut(s) 2301
EciI GGCGGA 1 cut(s) 45
Eco130I CCWWGG 4 cut(s) 1571, 1646, 2873, 3201
Eco147I AGGCCT 1 cut(s) 1018
Eco24I GRGCYC 1 cut(s) 111
Eco31I GGTCTC 1 cut(s) 604
Eco32I GATATC 2 cut(s) 178, 1890
Eco47I GGWCC 4 cut(s) 1425, 1676, 2066, 2696
Eco47III AGCGCT 4 cut(s) 427, 454, 480, 1715
Eco88I CYCGRG 3 cut(s) 573, 1358, 3152
EcoNI CCTNNNNNAGG 1 cut(s) 1068
EcoO109I RGGNCCY 1 cut(s) 2066
EcoRII CCWGG 6 cut(s) 591, 695, 769, 1549, 2514, 3074
EcoRV GATATC 2 cut(s) 178, 1890
EcoT14I CCWWGG 4 cut(s) 1571, 1646, 2873, 3201
EcoT22I ATGCAT 2 cut(s) 2565, 2643
EcoT38I GRGCYC 1 cut(s) 111
ErhI CCWWGG 4 cut(s) 1571, 1646, 2873, 3201
Esp3I CGTCTC 4 cut(s) 98, 154, 160, 3312
FalI AAGNNNNNCTT 2 cut(s) 324, 356
FaqI GGGAC 4 cut(s) 147, 1411, 1689, 2238
FauI CCCGC 2 cut(s) 44, 118
FbaI TGATCA 1 cut(s) 1999
FblI GTMKAC 1 cut(s) 2824
Fnu4HI GCNGC 7 cut(s) 413, 456, 1211, 1775, 1778, 2541, 3081
FriOI GRGCYC 1 cut(s) 111
Fsp4HI GCNGC 7 cut(s) 413, 456, 1211, 1775, 1778, 2541, 3081
FspBI CTAG 6 cut(s) 350, 450, 548, 1239, 1698, 2102
GlaI GCGC 6 cut(s) 139, 427, 454, 480, 792, 1715
GluI GCNGC 7 cut(s) 413, 456, 1211, 1775, 1778, 2541, 3081
GsaI CCCAGC 2 cut(s) 138, 485
GsuI CTGGAG 3 cut(s) 603, 614, 1005
HaeII RGCGCY 5 cut(s) 141, 429, 456, 482, 1717
HapII CCGG 7 cut(s) 24, 171, 472, 868, 940, 2041, 2508
HgaI GACGC 4 cut(s) 176, 1202, 2260, 3294
HhaI GCGC 6 cut(s) 140, 428, 455, 481, 793, 1716
Hin1I GRCGYC 2 cut(s) 168, 1213
Hin6I GCGC 6 cut(s) 138, 426, 453, 479, 791, 1714
HinP1I GCGC 6 cut(s) 138, 426, 453, 479, 791, 1714
HpaII CCGG 7 cut(s) 24, 171, 472, 868, 940, 2041, 2508
HphI GGTGA 2 cut(s) 1034, 1538
Hpy166II GTNNAC 6 cut(s) 201, 568, 1417, 1660, 2681, 2825
Hpy8I GTNNAC 6 cut(s) 201, 568, 1417, 1660, 2681, 2825
Hpy99I CGWCG 3 cut(s) 128, 170, 1888
HpyCH4III ACNGT 6 cut(s) 403, 1203, 1334, 1664, 2151, 2916
HpyCH4IV ACGT 2 cut(s) 1387, 1656
HpyF10VI GCNNNNNNNGC 7 cut(s) 36, 180, 788, 1130, 2016, 2241, 2540
HpyF3I CTNAG 8 cut(s) 513, 633, 847, 1013, 1269, 1512, 2666, 2814
HpySE526I ACGT 2 cut(s) 1387, 1656
Hsp92I GRCGYC 2 cut(s) 168, 1213
HspAI GCGC 6 cut(s) 138, 426, 453, 479, 791, 1714
Kpn2I TCCGGA 1 cut(s) 2040
KroI GCCGGC 1 cut(s) 170
KroNI GCCGGC 1 cut(s) 172
Ksp22I TGATCA 1 cut(s) 1999
LmnI GCTCC 5 cut(s) 10, 490, 942, 1747, 3154
Lsp1109I GCAGC 5 cut(s) 424, 442, 1789, 2552, 3067
LweI GCATC 7 cut(s) 673, 802, 994, 1144, 2521, 2552, 2628
MaeI CTAG 6 cut(s) 350, 450, 548, 1239, 1698, 2102
MaeII ACGT 2 cut(s) 1387, 1656
MaeIII GTNAC 2 cut(s) 1499, 2910
MbiI CCGCTC 2 cut(s) 113, 898
MfeI CAATTG 4 cut(s) 724, 739, 1146, 2970
MflI RGATCY 6 cut(s) 32, 509, 2164, 2669, 2715, 3268
MhlI GDGCHC 4 cut(s) 111, 1669, 2355, 3126
MluI ACGCGT 1 cut(s) 3303
MlyI GAGTC 3 cut(s) 68, 1973, 2908
MmeI TCCRAC 1 cut(s) 1599
Mph1103I ATGCAT 2 cut(s) 2565, 2643
MreI CGCCGGCG 1 cut(s) 170
MroI TCCGGA 1 cut(s) 2040
MroNI GCCGGC 1 cut(s) 170
MroXI GAANNNNTTC 3 cut(s) 339, 1278, 2890
MslI CAYNNNNRTG 6 cut(s) 369, 371, 1227, 1371, 2948, 2999
MspI CCGG 7 cut(s) 24, 171, 472, 868, 940, 2041, 2508
MspR9I CCNGG 9 cut(s) 25, 593, 697, 771, 869, 1551, 2508, 2516, 3076
MunI CAATTG 4 cut(s) 724, 739, 1146, 2970
Mva1269I GAATGC 2 cut(s) 2313, 3083
MvaI CCWGG 6 cut(s) 593, 697, 771, 1551, 2516, 3076
MvnI CGCG 1 cut(s) 3305
MwoI GCNNNNNNNGC 7 cut(s) 36, 180, 788, 1130, 2016, 2241, 2540
NaeI GCCGGC 1 cut(s) 172
NciI CCSGG 3 cut(s) 25, 869, 2508
NcoI CCATGG 2 cut(s) 2873, 3201
NgoMIV GCCGGC 1 cut(s) 170
NlaIV GGNNCC 5 cut(s) 34, 970, 1427, 1677, 1743
NmuCI GTSAC 1 cut(s) 2910
NsiI ATGCAT 2 cut(s) 2565, 2643
NspI RCATGY 3 cut(s) 260, 714, 2911
OliI CACNNNNGTG 1 cut(s) 371
PaeR7I CTCGAG 1 cut(s) 573
PagI TCATGA 1 cut(s) 1366
PceI AGGCCT 1 cut(s) 1018
PciI ACATGT 1 cut(s) 256
PctI GAATGC 2 cut(s) 2313, 3083
PdiI GCCGGC 1 cut(s) 172
PdmI GAANNNNTTC 3 cut(s) 339, 1278, 2890
PflMI CCANNNNNTGG 2 cut(s) 626, 1822
PfoI TCCNGGA 1 cut(s) 591
PkrI GCNGC 7 cut(s) 414, 457, 1212, 1776, 1779, 2542, 3082
Ple19I CGATCG 1 cut(s) 56
PleI GAGTC 3 cut(s) 67, 1973, 2907
PpsI GAGTC 3 cut(s) 67, 1973, 2907
PpuMI RGGWCCY 1 cut(s) 2066
PscI ACATGT 1 cut(s) 256
PshBI ATTAAT 2 cut(s) 948, 2850
PsiI TTATAA 2 cut(s) 2486, 2988
Psp5II RGGWCCY 1 cut(s) 2066
Psp6I CCWGG 6 cut(s) 591, 695, 769, 1549, 2514, 3074
PspFI CCCAGC 2 cut(s) 134, 481
PspGI CCWGG 6 cut(s) 591, 695, 769, 1549, 2514, 3074
PspN4I GGNNCC 5 cut(s) 34, 970, 1427, 1677, 1743
PspPI GGNCC 7 cut(s) 629, 1425, 1676, 2066, 2234, 2696, 3226
PspPPI RGGWCCY 1 cut(s) 2066
PstI CTGCAG 1 cut(s) 414
PstNI CAGNNNCTG 1 cut(s) 2546
PsuI RGATCY 6 cut(s) 32, 509, 2164, 2669, 2715, 3268
PvuI CGATCG 1 cut(s) 56
RsaI GTAC 4 cut(s) 200, 837, 1205, 1383
RsaNI GTAC 4 cut(s) 199, 836, 1204, 1382
RseI CAYNNNNRTG 6 cut(s) 369, 371, 1227, 1371, 2948, 2999
Rsr2I CGGWCCG 1 cut(s) 2696
RsrII CGGWCCG 1 cut(s) 2696
SatI GCNGC 7 cut(s) 413, 456, 1211, 1775, 1778, 2541, 3081
Sau96I GGNCC 7 cut(s) 629, 1425, 1676, 2066, 2234, 2696, 3226
SchI GAGTC 3 cut(s) 68, 1973, 2908
ScrFI CCNGG 9 cut(s) 25, 593, 697, 771, 869, 1551, 2508, 2516, 3076
SduI GDGCHC 4 cut(s) 111, 1669, 2355, 3126
SfaNI GCATC 7 cut(s) 673, 802, 994, 1144, 2521, 2552, 2628
SfcI CTRYAG 2 cut(s) 410, 2707
Sfr274I CTCGAG 1 cut(s) 573
SgrAI CRCCGGYG 1 cut(s) 170
SinI GGWCC 4 cut(s) 1425, 1676, 2066, 2696
SlaI CTCGAG 1 cut(s) 573
SmiMI CAYNNNNRTG 6 cut(s) 369, 371, 1227, 1371, 2948, 2999
SmlI CTYRAG 3 cut(s) 573, 1405, 3312
SmoI CTYRAG 3 cut(s) 573, 1405, 3312
SseBI AGGCCT 1 cut(s) 1018
SsiI CCGC 9 cut(s) 30, 37, 111, 898, 1045, 1210, 1775, 2498, 2694
SspI AATATT 1 cut(s) 2604
SspMI CTAG 6 cut(s) 350, 450, 548, 1239, 1698, 2102
StuI AGGCCT 1 cut(s) 1018
StyD4I CCNGG 9 cut(s) 23, 591, 695, 769, 867, 1549, 2506, 2514, 3074
StyI CCWWGG 4 cut(s) 1571, 1646, 2873, 3201
TaaI ACNGT 6 cut(s) 403, 1203, 1334, 1664, 2151, 2916
TaiI ACGT 2 cut(s) 1390, 1659
TatI WGTACW 1 cut(s) 835
TauI GCSGC 2 cut(s) 1213, 1777
TscAI CASTG 6 cut(s) 373, 882, 1339, 1667, 2285, 2919
TseFI GTSAC 1 cut(s) 2910
TseI GCWGC 5 cut(s) 412, 455, 1777, 2540, 3080
Tsp45I GTSAC 1 cut(s) 2910
TspGWI ACGGA 5 cut(s) 142, 1886, 2136, 2428, 2688
TspRI CASTG 6 cut(s) 373, 882, 1339, 1667, 2285, 2919
Van91I CCANNNNNTGG 2 cut(s) 626, 1822
VpaK11BI GGWCC 4 cut(s) 1425, 1676, 2066, 2696
VspI ATTAAT 2 cut(s) 948, 2850
XagI CCTNNNNNAGG 1 cut(s) 1068
XapI RAATTY 5 cut(s) 306, 675, 1588, 2052, 2622
XbaI TCTAGA 1 cut(s) 1238
XceI RCATGY 3 cut(s) 260, 714, 2911
XcmI CCANNNNNNNNNTGG 2 cut(s) 1406, 1931
XhoI CTCGAG 1 cut(s) 573
XmiI GTMKAC 1 cut(s) 2824
XmnI GAANNNNTTC 3 cut(s) 339, 1278, 2890
XspI CTAG 6 cut(s) 350, 450, 548, 1239, 1698, 2102
Zsp2I ATGCAT 2 cut(s) 2565, 2643
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.