Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0001577

Physical Location & Seq

Genomic Coordinates Reverse (-)

28233709 .. 28239847

Gene Structure 6139 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G317900.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3234 bp

ATGTCGTCGGAGAAGCTCATTGCAAATGGTGCGGTACTATCCGAGGCAATGAATATGAATGCGGCATCTTTCTCCTTCACGCCGATTTTCGAAGAGTTGCCGGTGGCCACCATTGTATCGGTGTCGCGGCCCGATACCGGAGATATCAGCCCCATGCTTCTGTCTTACACCATTGAGTTTCAATACAAACAGTTCAAGTGGCGGCTGCTGAAGAAAGCATCACAAGTTCTCTATTTACATTTTGCTTTGAGGAAGCGTGCAATAATTGAGGAGTTTCATGAGAAACAAGAGCAGGTGAAAGAATGGCTTCATAGCATAGGAATAGTAGATCAGACGGCAGTAGTGCAAGATGATGATGAACCGGATGATGGGGCTGTTCCTGTACATAATGAAGAAAGTGTTAGAAACAGATACGTTCCGTCTCGTGCTGCTTTGCCCATCCTCCGTCCAGCACTAGGAGGGCAGCAGTCCATTTCGGACAGAGCAAAGGTGGCAATGCAGGGTTATTTGAATCATTTTCTGGGAAACATGGATCTAGTGAATTCTCGAGAGGTCTGTAAATTTTTGGAGGTCTCGAAGCTCTCCTTTTCACAGGAGTATGGTCCAAAGCTGAAAGAAGGTTATGTAATGGTGAAGCATCTACCAAAAATTGCAGGGGCTGATTCTGATGTGAACTCTTTTGCATCCCTTTGTCTTGGTTTCTGTAGCAACAACTGGCAAAAGGTGTGGGCTGTTTTAAAGCCTGGGTTCCTGGCCTTACTAGAGGATCCTTTTGACACTGAACTTTTAGACATAATCGTTTTCAATGTACTGCCAACCTCAAATGAAAATGCATGCTCACAAATATATTTGGCTAATCAAATAAAGGAACGCAATCCTTTACGTTACACATTAAGGGTTGCTTCTGGAAATCAAAGCTTAAGGTTAAGAACCACTAGCAATGCTAAAGTCAAAGATTGGGTTGCTGCAATTAATGATGCTGGTTTAAGGCCTCATGAAGGTTGGTGTCATCCTCATCGCTTTGGTTCCTTTGCTTCTCCAAGGGGTTTGACTGATGATGGGAGCCAAGCTCAATGGTTTGTAGATGGCCAAGCAGCATTTGAAGCTATTGCTTCTTCTGTTGAAGCTGCAAAATCAGAGATATTCATCACTGGCTGGTGGCTTTGCCCAGAACTGTATCTAAGACGTCCTTTTCATAGTAATTCATCTTCTCGGCTTGATGCATTACTATATGAAAAGGCTAGGCAAGGAGTTCAGATTTACATTCTTCTCTACAAGGAGGTTGCTCTTGCTTTAAAGATCAACAGTTCGTACAGTAAGAAATTGCTTTCTAACATTCATGAGAATGTGAGAGTATTGCGCTATCCTGACCGTTTTCCCACGGGCATTTATTTGTGGTCACATCATGAAAAACTTGTCATAGTTGATTACCAGATTTGCTTCATTGGAGGACTAGATTTGTGCTTCGGCCGCTATGACACGGTTGAACACAAAGTGGGTGACTGCCCTCCTCATATATGGCCAGGAAAGGACTACTATAACCCAAGAGAATCCGAACCAAATTCTTGGGAAGACACAATGAAAGATGAATTGGAGCGTGAAAGATATCCGCGTATGCCGTGGCATGATGTCCAATGTGCCCTTTGGGGACCGCCCTGTCGTGACATTGCCAGGCATTTTGTTCAGCGCTGGAACCATGCTAAGAGAAACAAAGCTCCACATGAACAAACAATTCCACTACTTATGCCTCAACATCACATGGTCATCCCTCATTACATGGGAAGAAGTAGAGAGATAGACGTTGAAAAGAAAAACAAAGAAGAAACCCCGAACTCCTTTTCACCGTCGCAGGATATTCCCTTGCTTTTGCCTCAAGAAGCTGATGGTTTAAATGCTCCTATTGTAGACAAAAAGCCAAGCGCCCTGGACTTGAACCATAATCTTCTTGAGCAGCCAACCGATGATTTATACGCAGATATGCAGATGGAAGGTTTTGTAGATGACCTTCATTCTATGGATCTCAAAAGTGAAACAAATTTAAATATGGTGGCACAATCTGGCCTGACAACTTCAAATGAAGGGTTGGAAAGTCCAGAGGAACATGATCATGCTGTTGCTGCTGATGATTATGGACAAATAGGTCCTCGTACTGCATGCCATTGTCAGGTTGTCAGAAGTGTGAGCCAGTGGTCTGCTGGATCTAGTCAGGCTGAAGATAGCATACACAAAGCTTATTGTTCTCTCATTGAGAAAGCAGAACATTTTGTCTATATTGAGAATCAATTCTTCATATCAGGTCTTTCAGGGGATGAGATTATACAGAACCGTGTCCTGGAAGCGTTGTACAGGCGTATTAAGCTAGCACACAAAGAACAAAAGTGTTTTAGGGTGATCGTTGTCATACCACTCTTACCTGGCTTTCAGGGTGGTGTGGACGATGGTGGTGCGGCTACTGTTAGAGCCCTAATGCATTGGCAGTATCGAACCATTAGCTGGGAAAAACATTCAATACTGCATAATCTAAAAGTTTTGCTTGGTCCTAAGACACATGATTACATTTCTTTCTATGGTCTGAGGTCGTATGGCAGACTTTTCGAAGGTGGTCCTGTATCCACAAGTCAGGTTTATGTACACAGCAAAGTGATGATAATAGATGATTGTGTTGCCTTGATCGGATCGTCTAATATTAACGACAGAAGTCTGCTTGGATCAAGAGACTCTGAGATTGGTGTAGTAATTGAAGATAAAGAGTTTCTTGAATCATCTATGAATGGACTGCCTTGGAAGGCCGGAAAATTTGCTTATAGTCTTAGGTGCTCTCTGTGGTCTGAGCACCTGGGTCTTCATGCAGGGGAGATAAATCAAATCAGTGATCCTGTATCAGACACAACATACAAAGATCTGTGGTTAGCAACTGCGAAGGAAAATTCAATTATTTACCAAGATGTCTTTTCTTGTATTCCGAATGATTCTATACACTCAAGAGCTGCTCTCAGACAATGCATGGCTCATCAGAAAGAGAAACTTGGGCACACCACAATTGATTTGGGGATCGCCCCAGAGAAGATACAATCCTGTGAGAATGGAGAGGTGAAAGAAACAGATCCAATGGAAAGATTGAAGCATGTAAGGGGACATCTTGTTTCCTTCCCTTTAGAGTTTATGCAACAAGAAGATTTGAGACCAGTGTTCAATGAAAGTGAATTTTATACATCCCCTCAAGTTTTTCGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004620 GO:0004630 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006629 GO:0006643 GO:0006644 GO:0006664 GO:0006793 GO:0006796 GO:0006950 GO:0006995 GO:0007154 GO:0007275 GO:0008081 GO:0008150 GO:0008152 GO:0008610 GO:0009056 GO:0009058 GO:0009247 GO:0009267 GO:0009395 GO:0009605 GO:0009719 GO:0009725 GO:0009733 GO:0009987 GO:0009991 GO:0010033 GO:0016036 GO:0016042 GO:0016298 GO:0016787 GO:0016788 GO:0019374 GO:0019375 GO:0019637 GO:0022622 GO:0031667 GO:0031668 GO:0031669 GO:0032501 GO:0032502 GO:0032879 GO:0033554 GO:0042221 GO:0042578 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043562 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044249 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0046434 GO:0046467 GO:0048364 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051716 GO:0060627 GO:0065007 GO:0071496 GO:0071704 GO:0099402 GO:1901135 GO:1901137 GO:1901575 GO:1901576 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00564 ko00565 ko01100 ko01110 ko04014 ko04024 ko04071 ko04072 ko04144 ko04666 ko04724 ko04912 ko05231 map00564 map00565 map01100 map01110 map04014 map04024 map04071 map04072 map04144 map04666 map04724 map04912 map05231

Pfam Domains

Protein Families

PH PLDc PLDc_2

Protein Analysis

1078

Amino Acids

122.13

Weight (kDa)

5.88

Isoelectric Point (pI)

44.19

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001577)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16785 AT3G16785 AT3G16785 AT3G16785 AT3G16785 AT3G16785
fragaria_vesca	FvH4_4g18810 FvH4_6g06940 FvH4_6g06940 FvH4_6g06940
malus_domestica	MD04G1197500.v1.1 MD12G1210300.v1.1 MD13G1162600.v1.1 MD16G1162400.v1.1
prunus_persica	Prupe.1G130000_v2.0.a1 Prupe.1G130000_v2.0.a1 Prupe.1G130000_v2.0.a1 Prupe.1G130000_v2.0.a1 Prupe.1G130000_v2.0.a1 Prupe.1G130000_v2.0.a1 Prupe.1G130000_v2.0.a1 Prupe.6G317900_v2.0.a1 Prupe.6G317900_v2.0.a1 Prupe.6G317900_v2.0.a1
pyrus_communis	pycom04g17480 pycom13g13890 pycom16g13770
rosa_chinensis	RchiOBHm_Chr3g0456481 RchiOBHm_Chr4g0423621
rosa_laevigata	RLG00000007541 RLG00000025302
rosa_multiflora	Rmu_co8413375.1_g000001 Rmu_sc0000464.1_g000017 Rmu_sc0002607.1_g000011 Rmu_sc0008373.1_g000012 Rmu_sc0016309.1_g000001
rosa_roxburghii	Rroxscaffold_5G00365830 Rroxscaffold_6G00422720
rosa_rugosa	Rorug03G0013400 Rorug03G0013400 Rorug03G0013400 Rorug04G0189100
rosa_samantha	Rh3AG073700 Rh3BG075600 Rh3DG076900 Rh4AG248700 Rh4BG254000 Rh4DG249000
rosa_wichuraiana	Rw3G006320 Rw4G021300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	283
AasI	GACNNNNNNGTC	2 cut(s)	1656, 2139
AatII	GACGTC	1 cut(s)	1189
Acc36I	ACCTGC	1 cut(s)	283
AccB7I	CCANNNNNTGG	1 cut(s)	2493
AccI	GTMKAC	1 cut(s)	1905
AccII	CGCG	2 cut(s)	127, 1612
AciI	CCGC	8 cut(s)	32, 62, 127, 202, 1471, 1610, 1652, 2447
AcoI	YGGCCR	4 cut(s)	105, 1087, 1468, 1520
AcsI	RAATTY	7 cut(s)	541, 560, 1561, 2035, 2795, 2926, 3203
AcuI	CTGAAG	2 cut(s)	230, 2232
AcyI	GRCGYC	1 cut(s)	1186
AdeI	CACNNNGTG	1 cut(s)	1495
AfaI	GTAC	7 cut(s)	36, 384, 810, 1313, 2149, 2345, 2631
AfeI	AGCGCT	1 cut(s)	1688
AfiI	CCNNNNNNNGG	7 cut(s)	137, 368, 455, 998, 2164, 2332, 2493
AflII	CTTAAG	1 cut(s)	919
AjnI	CCWGG	8 cut(s)	742, 750, 1522, 1670, 1923, 2331, 2413, 2835
AjuI	GAANNNNNNNTTGG	2 cut(s)	1574, 1606
Alw21I	GWGCWC	2 cut(s)	2819, 2835
Alw26I	GTCTC	4 cut(s)	426, 577, 2709, 3175
AlwNI	CAGNNNCTG	1 cut(s)	659
Ama87I	CYCGRG	1 cut(s)	546
Aor51HI	AGCGCT	1 cut(s)	1688
AoxI	GGCC	9 cut(s)	105, 128, 753, 989, 1087, 1468, 1520, 2059, 2787
ApeKI	GCWGC	9 cut(s)	205, 428, 463, 965, 1094, 1127, 1951, 2117, 2987
ApoI	RAATTY	7 cut(s)	541, 560, 1561, 2035, 2795, 2926, 3203
AseI	ATTAAT	1 cut(s)	972
Asp700I	GAANNNNTTC	2 cut(s)	306, 2282
AspLEI	GCGC	3 cut(s)	1362, 1689, 1922
AspS9I	GGNCC	6 cut(s)	129, 602, 1649, 2141, 2537, 2603
AsuHPI	GGTGA	6 cut(s)	307, 643, 1511, 1833, 2401, 3103
AsuII	TTCGAA	2 cut(s)	90, 2595
AsuNHI	GCTAGC	1 cut(s)	2359
AvaI	CYCGRG	1 cut(s)	546
AvaII	GGWCC	5 cut(s)	602, 1649, 2141, 2537, 2603
BaeGI	GKGCMC	2 cut(s)	1642, 3033
BaeI	ACNNNNGTAYC	2 cut(s)	99, 132
BalI	TGGCCA	3 cut(s)	107, 1089, 1522
BamHI	GGATCC	1 cut(s)	766
BanII	GRGCYC	1 cut(s)	2464
BarI	GAAGNNNNNNTAC	6 cut(s)	1192, 1224, 1989, 2021, 2205, 2237
BauI	CACGAG	1 cut(s)	423
BbsI	GAAGAC	2 cut(s)	1578, 2834
Bbv12I	GWGCWC	2 cut(s)	2819, 2835
BbvI	GCAGC	9 cut(s)	192, 415, 475, 952, 1106, 1114, 1963, 2104, 2974
BccI	CCATC	7 cut(s)	362, 446, 1052, 1079, 1877, 1978, 2432
BceAI	ACGGC	2 cut(s)	351, 1603
BcgI	CGANNNNNNTGC	4 cut(s)	2426, 2460, 2575, 2609
BciT130I	CCWGG	8 cut(s)	744, 752, 1524, 1672, 1925, 2333, 2415, 2837
BciVI	GTATCC	1 cut(s)	2620
BclI	TGATCA	1 cut(s)	2104
BcoDI	GTCTC	4 cut(s)	426, 577, 2709, 3175
BfaI	CTAG	8 cut(s)	455, 536, 761, 936, 1242, 1454, 2202, 2360
BfmI	CTRYAG	1 cut(s)	703
BfoI	RGCGCY	2 cut(s)	1690, 1923
BfrI	CTTAAG	1 cut(s)	919
BfuAI	ACCTGC	1 cut(s)	283
BfuI	GTATCC	1 cut(s)	2620
BglII	AGATCT	1 cut(s)	2899
Bme1390I	CCNGG	8 cut(s)	744, 752, 1524, 1672, 1925, 2333, 2415, 2837
Bme18I	GGWCC	5 cut(s)	602, 1649, 2141, 2537, 2603
BmeT110I	CYCGRG	1 cut(s)	546
BmgT120I	GGNCC	6 cut(s)	129, 602, 1649, 2141, 2537, 2603
BmiI	GGNNCC	6 cut(s)	749, 768, 1027, 1064, 1650, 1694
BmrFI	CCNGG	8 cut(s)	744, 752, 1524, 1672, 1925, 2333, 2415, 2837
BmsI	GCATC	6 cut(s)	74, 227, 646, 692, 967, 1210
BmtI	GCTAGC	1 cut(s)	2363
BoxI	GACNNNNGTC	1 cut(s)	2697
BpiI	GAAGAC	2 cut(s)	1578, 2834
BplI	GAGNNNNNCTC	4 cut(s)	1054, 1086, 2976, 3008
Bpu14I	TTCGAA	2 cut(s)	90, 2595
BpuEI	CTTGAG	4 cut(s)	1857, 1967, 2965, 3204
BsaBI	GATNNNNATC	1 cut(s)	1145
BsaHI	GRCGYC	1 cut(s)	1186
BsaI	GGTCTC	2 cut(s)	577, 3175
BsaJI	CCNNGG	8 cut(s)	42, 743, 1040, 1380, 1619, 1923, 2780, 2836
BsaWI	WCCGGW	2 cut(s)	137, 361
Bsc4I	CCNNNNNNNGG	7 cut(s)	137, 368, 455, 998, 2164, 2332, 2493
Bse118I	RCCGGY	1 cut(s)	100
Bse1I	ACTGG	4 cut(s)	719, 1156, 2185, 3185
Bse3DI	GCAATG	5 cut(s)	18, 54, 501, 946, 1665
Bse8I	GATNNNNATC	1 cut(s)	1145
BseBI	CCWGG	8 cut(s)	744, 752, 1524, 1672, 1925, 2333, 2415, 2837
BseDI	CCNNGG	8 cut(s)	42, 743, 1040, 1380, 1619, 1923, 2780, 2836
BseGI	GGATG	7 cut(s)	370, 438, 683, 1009, 1764, 2314, 3212
BseJI	GATNNNNATC	1 cut(s)	1145
BseLI	CCNNNNNNNGG	7 cut(s)	137, 368, 455, 998, 2164, 2332, 2493
BseMI	GCAATG	5 cut(s)	18, 54, 501, 946, 1665
BseMII	CTCAG	4 cut(s)	2564, 2712, 2820, 3007
BseNI	ACTGG	4 cut(s)	719, 1156, 2185, 3185
BseRI	GAGGAG	2 cut(s)	284, 1500
BseSI	GKGCMC	2 cut(s)	1642, 3033
BseX3I	CGGCCG	1 cut(s)	1468
BseXI	GCAGC	9 cut(s)	192, 415, 475, 952, 1106, 1114, 1963, 2104, 2974
BseYI	CCCAGC	1 cut(s)	2493
Bsh1236I	CGCG	2 cut(s)	127, 1612
Bsh1285I	CGRYCG	1 cut(s)	1471
BshFI	GGCC	9 cut(s)	107, 130, 755, 991, 1089, 1470, 1522, 2061, 2789
BsiEI	CGRYCG	1 cut(s)	1471
BsiHKAI	GWGCWC	2 cut(s)	2819, 2835
BsiHKCI	CYCGRG	1 cut(s)	546
BsiSI	CCGG	4 cut(s)	101, 138, 362, 2790
BslFI	GGGAC	2 cut(s)	1662, 3147
BslI	CCNNNNNNNGG	7 cut(s)	137, 368, 455, 998, 2164, 2332, 2493
BsmAI	GTCTC	4 cut(s)	426, 577, 2709, 3175
BsmBI	CGTCTC	1 cut(s)	426
BsmFI	GGGAC	2 cut(s)	1662, 3147
BsmI	GAATGC	1 cut(s)	64
BsnI	GGCC	9 cut(s)	107, 130, 755, 991, 1089, 1470, 1522, 2061, 2789
Bso31I	GGTCTC	2 cut(s)	577, 3175
BsoBI	CYCGRG	1 cut(s)	546
Bsp119I	TTCGAA	2 cut(s)	90, 2595
Bsp1286I	GDGCHC	5 cut(s)	1642, 2464, 2819, 2835, 3033
Bsp1407I	TGTACA	3 cut(s)	382, 2343, 2629
BspACI	CCGC	8 cut(s)	32, 62, 127, 202, 1471, 1610, 1652, 2447
BspANI	GGCC	9 cut(s)	107, 130, 755, 991, 1089, 1470, 1522, 2061, 2789
BspCNI	CTCAG	4 cut(s)	2565, 2713, 2821, 3006
BspFNI	CGCG	2 cut(s)	127, 1612
BspHI	TCATGA	4 cut(s)	277, 994, 1339, 1405
BspLI	GGNNCC	6 cut(s)	749, 768, 1027, 1064, 1650, 1694
BspMI	ACCTGC	1 cut(s)	283
BspOI	GCTAGC	1 cut(s)	2363
BspT104I	TTCGAA	2 cut(s)	90, 2595
BspTI	CTTAAG	1 cut(s)	919
BspTNI	GGTCTC	2 cut(s)	577, 3175
BsrDI	GCAATG	5 cut(s)	18, 54, 501, 946, 1665
BsrFI	RCCGGY	1 cut(s)	100
BsrGI	TGTACA	3 cut(s)	382, 2343, 2629
BsrI	ACTGG	4 cut(s)	719, 1156, 2185, 3185
BssAI	RCCGGY	1 cut(s)	100
BssECI	CCNNGG	8 cut(s)	42, 743, 1040, 1380, 1619, 1923, 2780, 2836
BssNI	GRCGYC	1 cut(s)	1186
BssSI	CACGAG	1 cut(s)	423
BssT1I	CCWWGG	2 cut(s)	1040, 2780
Bst2BI	CACGAG	1 cut(s)	423
Bst2UI	CCWGG	8 cut(s)	744, 752, 1524, 1672, 1925, 2333, 2415, 2837
Bst4CI	ACNGT	9 cut(s)	192, 1176, 1307, 1316, 1373, 1483, 1845, 2327, 2455
Bst6I	CTCTTC	1 cut(s)	87
BstACI	GRCGYC	1 cut(s)	1186
BstAFI	CTTAAG	1 cut(s)	919
BstAPI	GCANNNNNTGC	1 cut(s)	29
BstAUI	TGTACA	3 cut(s)	382, 2343, 2629
BstBI	TTCGAA	2 cut(s)	90, 2595
BstC8I	GCNNGC	4 cut(s)	258, 835, 2155, 2361
BstDEI	CTNAG	8 cut(s)	1181, 1701, 2541, 2573, 2721, 2810, 2829, 2993
BstDSI	CCRYGG	2 cut(s)	1380, 1619
BstENI	CCTNNNNNAGG	1 cut(s)	996
BstF5I	GGATG	7 cut(s)	370, 438, 683, 1009, 1764, 2314, 3212
BstFNI	CGCG	2 cut(s)	127, 1612
BstH2I	RGCGCY	2 cut(s)	1690, 1923
BstHHI	GCGC	3 cut(s)	1362, 1689, 1922
BstMAI	GTCTC	4 cut(s)	426, 577, 2709, 3175
BstMCI	CGRYCG	1 cut(s)	1471
BstMWI	GCNNNNNNNGC	6 cut(s)	29, 491, 1103, 1470, 2117, 2356
BstNI	CCWGG	8 cut(s)	744, 752, 1524, 1672, 1925, 2333, 2415, 2837
BstNSI	RCATGY	3 cut(s)	837, 2157, 3128
BstPAI	GACNNNNGTC	1 cut(s)	2697
BstSCI	CCNGG	8 cut(s)	742, 750, 1522, 1670, 1923, 2331, 2413, 2835
BstSFI	CTRYAG	1 cut(s)	703
BstSLI	GKGCMC	2 cut(s)	1642, 3033
BstUI	CGCG	2 cut(s)	127, 1612
BstV1I	GCAGC	9 cut(s)	192, 415, 475, 952, 1106, 1114, 1963, 2104, 2974
BstV2I	GAAGAC	2 cut(s)	1578, 2834
BstX2I	RGATCY	6 cut(s)	532, 766, 2017, 2198, 2899, 3103
BstXI	CCANNNNNNTGG	1 cut(s)	1566
BstYI	RGATCY	6 cut(s)	532, 766, 2017, 2198, 2899, 3103
BstZI	CGGCCG	1 cut(s)	1468
BsuI	GTATCC	1 cut(s)	2620
BsuRI	GGCC	9 cut(s)	107, 130, 755, 991, 1089, 1470, 1522, 2061, 2789
BtgI	CCRYGG	2 cut(s)	1380, 1619
BtgZI	GCGATG	1 cut(s)	1001
BtsCI	GGATG	7 cut(s)	370, 438, 683, 1009, 1764, 2314, 3212
BtsIMutI	CAGTG	5 cut(s)	777, 1149, 2192, 2875, 3192
BveI	ACCTGC	1 cut(s)	283
Cac8I	GCNNGC	4 cut(s)	258, 835, 2155, 2361
CaiI	CAGNNNCTG	1 cut(s)	659
CciI	TCATGA	4 cut(s)	277, 994, 1339, 1405
CfoI	GCGC	3 cut(s)	1362, 1689, 1922
Cfr10I	RCCGGY	1 cut(s)	100
Cfr13I	GGNCC	6 cut(s)	129, 602, 1649, 2141, 2537, 2603
Csp6I	GTAC	7 cut(s)	35, 383, 809, 1312, 2148, 2344, 2630
CspCI	CAANNNNNGTGG	2 cut(s)	707, 742
CviQI	GTAC	7 cut(s)	35, 383, 809, 1312, 2148, 2344, 2630
DdeI	CTNAG	8 cut(s)	1181, 1701, 2541, 2573, 2721, 2810, 2829, 2993
DraI	TTTAAA	4 cut(s)	738, 1296, 1890, 2040
DraIII	CACNNNGTG	1 cut(s)	1495
DrdI	GACNNNNNNGTC	2 cut(s)	1656, 2139
DseDI	GACNNNNNNGTC	2 cut(s)	1656, 2139
EaeI	YGGCCR	4 cut(s)	105, 1087, 1468, 1520
EagI	CGGCCG	1 cut(s)	1468
Eam1104I	CTCTTC	1 cut(s)	87
EarI	CTCTTC	1 cut(s)	87
EclXI	CGGCCG	1 cut(s)	1468
Eco130I	CCWWGG	2 cut(s)	1040, 2780
Eco147I	AGGCCT	1 cut(s)	991
Eco24I	GRGCYC	1 cut(s)	2464
Eco31I	GGTCTC	2 cut(s)	577, 3175
Eco32I	GATATC	2 cut(s)	145, 1607
Eco47I	GGWCC	5 cut(s)	602, 1649, 2141, 2537, 2603
Eco47III	AGCGCT	1 cut(s)	1688
Eco52I	CGGCCG	1 cut(s)	1468
Eco57I	CTGAAG	2 cut(s)	230, 2232
Eco88I	CYCGRG	1 cut(s)	546
EcoNI	CCTNNNNNAGG	1 cut(s)	996
EcoO109I	RGGNCCY	1 cut(s)	2141
EcoRI	GAATTC	1 cut(s)	541
EcoRII	CCWGG	8 cut(s)	742, 750, 1522, 1670, 1923, 2331, 2413, 2835
EcoRV	GATATC	2 cut(s)	145, 1607
EcoT14I	CCWWGG	2 cut(s)	1040, 2780
EcoT22I	ATGCAT	4 cut(s)	835, 1225, 2472, 3005
EcoT38I	GRGCYC	1 cut(s)	2464
ErhI	CCWWGG	2 cut(s)	1040, 2780
Esp3I	CGTCTC	1 cut(s)	426
FaqI	GGGAC	2 cut(s)	1662, 3147
FbaI	TGATCA	1 cut(s)	2104
FblI	GTMKAC	1 cut(s)	1905
FokI	GGATG	7 cut(s)	377, 425, 670, 996, 1751, 2321, 3199
FriOI	GRGCYC	1 cut(s)	2464
FspBI	CTAG	8 cut(s)	455, 536, 761, 936, 1242, 1454, 2202, 2360
GlaI	GCGC	3 cut(s)	1361, 1688, 1921
GsaI	CCCAGC	1 cut(s)	2497
HaeII	RGCGCY	2 cut(s)	1690, 1923
HaeIII	GGCC	9 cut(s)	107, 130, 755, 991, 1089, 1470, 1522, 2061, 2789
HapII	CCGG	4 cut(s)	101, 138, 362, 2790
HhaI	GCGC	3 cut(s)	1362, 1689, 1922
Hin1I	GRCGYC	1 cut(s)	1186
Hin6I	GCGC	3 cut(s)	1360, 1687, 1920
HinP1I	GCGC	3 cut(s)	1360, 1687, 1920
HindIII	AAGCTT	2 cut(s)	916, 2229
HinfI	GANTC	7 cut(s)	511, 662, 1550, 2278, 2717, 2759, 2969
HpaII	CCGG	4 cut(s)	101, 138, 362, 2790
HphI	GGTGA	6 cut(s)	307, 643, 1511, 1833, 2401, 3103
Hpy166II	GTNNAC	4 cut(s)	673, 1906, 2434, 2632
Hpy8I	GTNNAC	4 cut(s)	673, 1906, 2434, 2632
Hpy99I	CGWCG	2 cut(s)	10, 1849
HpyCH4III	ACNGT	9 cut(s)	192, 1176, 1307, 1316, 1373, 1483, 1845, 2327, 2455
HpyCH4IV	ACGT	4 cut(s)	414, 883, 1186, 1800
HpyF10VI	GCNNNNNNNGC	6 cut(s)	29, 491, 1103, 1470, 2117, 2356
HpyF3I	CTNAG	8 cut(s)	1181, 1701, 2541, 2573, 2721, 2810, 2829, 2993
HpySE526I	ACGT	4 cut(s)	414, 883, 1186, 1800
Hsp92I	GRCGYC	1 cut(s)	1186
HspAI	GCGC	3 cut(s)	1360, 1687, 1920
Ksp22I	TGATCA	1 cut(s)	2104
LmnI	GCTCC	4 cut(s)	1062, 1594, 1720, 1900
Lsp1109I	GCAGC	9 cut(s)	192, 415, 475, 952, 1106, 1114, 1963, 2104, 2974
LweI	GCATC	6 cut(s)	74, 227, 646, 692, 967, 1210
MaeI	CTAG	8 cut(s)	455, 536, 761, 936, 1242, 1454, 2202, 2360
MaeII	ACGT	4 cut(s)	414, 883, 1186, 1800
MaeIII	GTNAC	4 cut(s)	884, 1398, 1499, 1661
MfeI	CAATTG	1 cut(s)	3039
MflI	RGATCY	6 cut(s)	532, 766, 2017, 2198, 2899, 3103
MhlI	GDGCHC	5 cut(s)	1642, 2464, 2819, 2835, 3033
MlsI	TGGCCA	3 cut(s)	107, 1089, 1522
MluNI	TGGCCA	3 cut(s)	107, 1089, 1522
MlyI	GAGTC	1 cut(s)	2711
MmeI	TCCRAC	1 cut(s)	2064
Mox20I	TGGCCA	3 cut(s)	107, 1089, 1522
Mph1103I	ATGCAT	4 cut(s)	835, 1225, 2472, 3005
MroXI	GAANNNNTTC	2 cut(s)	306, 2282
MscI	TGGCCA	3 cut(s)	107, 1089, 1522
MslI	CAYNNNNRTG	2 cut(s)	1344, 2106
Msp20I	TGGCCA	3 cut(s)	107, 1089, 1522
MspCI	CTTAAG	1 cut(s)	919
MspI	CCGG	4 cut(s)	101, 138, 362, 2790
MspR9I	CCNGG	8 cut(s)	744, 752, 1524, 1672, 1925, 2333, 2415, 2837
MunI	CAATTG	1 cut(s)	3039
Mva1269I	GAATGC	1 cut(s)	64
MvaI	CCWGG	8 cut(s)	744, 752, 1524, 1672, 1925, 2333, 2415, 2837
MvnI	CGCG	2 cut(s)	127, 1612
MwoI	GCNNNNNNNGC	6 cut(s)	29, 491, 1103, 1470, 2117, 2356
NheI	GCTAGC	1 cut(s)	2359
NlaIV	GGNNCC	6 cut(s)	749, 768, 1027, 1064, 1650, 1694
NmeAIII	GCCGAG	1 cut(s)	1192
NmuCI	GTSAC	3 cut(s)	1398, 1499, 1661
NsiI	ATGCAT	4 cut(s)	835, 1225, 2472, 3005
NspI	RCATGY	3 cut(s)	837, 2157, 3128
NspV	TTCGAA	2 cut(s)	90, 2595
PaeI	GCATGC	2 cut(s)	837, 2157
PaeR7I	CTCGAG	1 cut(s)	546
PagI	TCATGA	4 cut(s)	277, 994, 1339, 1405
PaqCI	CACCTGC	1 cut(s)	283
PceI	AGGCCT	1 cut(s)	991
PctI	GAATGC	1 cut(s)	64
PdmI	GAANNNNTTC	2 cut(s)	306, 2282
PfeI	GAWTC	6 cut(s)	511, 662, 1550, 2278, 2759, 2969
PflMI	CCANNNNNTGG	1 cut(s)	2493
PfoI	TCCNGGA	1 cut(s)	2331
PleI	GAGTC	1 cut(s)	2711
PpsI	GAGTC	1 cut(s)	2711
PpuMI	RGGWCCY	1 cut(s)	2141
PshAI	GACNNNNGTC	1 cut(s)	2697
PshBI	ATTAAT	1 cut(s)	972
Psp5II	RGGWCCY	1 cut(s)	2141
Psp6I	CCWGG	8 cut(s)	742, 750, 1522, 1670, 1923, 2331, 2413, 2835
PspFI	CCCAGC	1 cut(s)	2493
PspGI	CCWGG	8 cut(s)	742, 750, 1522, 1670, 1923, 2331, 2413, 2835
PspN4I	GGNNCC	6 cut(s)	749, 768, 1027, 1064, 1650, 1694
PspPI	GGNCC	6 cut(s)	129, 602, 1649, 2141, 2537, 2603
PspPPI	RGGWCCY	1 cut(s)	2141
PstNI	CAGNNNCTG	1 cut(s)	659
PsuI	RGATCY	6 cut(s)	532, 766, 2017, 2198, 2899, 3103
RsaI	GTAC	7 cut(s)	36, 384, 810, 1313, 2149, 2345, 2631
RsaNI	GTAC	7 cut(s)	35, 383, 809, 1312, 2148, 2344, 2630
RseI	CAYNNNNRTG	2 cut(s)	1344, 2106
Sau96I	GGNCC	6 cut(s)	129, 602, 1649, 2141, 2537, 2603
SchI	GAGTC	1 cut(s)	2711
ScrFI	CCNGG	8 cut(s)	744, 752, 1524, 1672, 1925, 2333, 2415, 2837
SduI	GDGCHC	5 cut(s)	1642, 2464, 2819, 2835, 3033
SfaNI	GCATC	6 cut(s)	74, 227, 646, 692, 967, 1210
SfcI	CTRYAG	1 cut(s)	703
Sfr274I	CTCGAG	1 cut(s)	546
SfuI	TTCGAA	2 cut(s)	90, 2595
SinI	GGWCC	5 cut(s)	602, 1649, 2141, 2537, 2603
SlaI	CTCGAG	1 cut(s)	546
SmiI	ATTTAAAT	1 cut(s)	2040
SmiMI	CAYNNNNRTG	2 cut(s)	1344, 2106
SmlI	CTYRAG	6 cut(s)	546, 919, 1872, 1946, 2980, 3219
SmoI	CTYRAG	6 cut(s)	546, 919, 1872, 1946, 2980, 3219
SphI	GCATGC	2 cut(s)	837, 2157
SseBI	AGGCCT	1 cut(s)	991
SsiI	CCGC	8 cut(s)	32, 62, 127, 202, 1471, 1610, 1652, 2447
SspI	AATATT	1 cut(s)	2686
SspMI	CTAG	8 cut(s)	455, 536, 761, 936, 1242, 1454, 2202, 2360
StuI	AGGCCT	1 cut(s)	991
StyD4I	CCNGG	8 cut(s)	742, 750, 1522, 1670, 1923, 2331, 2413, 2835
StyI	CCWWGG	2 cut(s)	1040, 2780
SwaI	ATTTAAAT	1 cut(s)	2040
TaaI	ACNGT	9 cut(s)	192, 1176, 1307, 1316, 1373, 1483, 1845, 2327, 2455
TaiI	ACGT	4 cut(s)	417, 886, 1189, 1803
TaqI	TCGA	5 cut(s)	90, 547, 575, 2482, 2595
TatI	WGTACW	4 cut(s)	382, 808, 2343, 2629
TauI	GCSGC	5 cut(s)	65, 130, 205, 1473, 2450
TfiI	GAWTC	6 cut(s)	511, 662, 1550, 2278, 2759, 2969
TscAI	CASTG	5 cut(s)	784, 1156, 2192, 2875, 3192
TseFI	GTSAC	3 cut(s)	1398, 1499, 1661
TseI	GCWGC	9 cut(s)	205, 428, 463, 965, 1094, 1127, 1951, 2117, 2987
Tsp45I	GTSAC	3 cut(s)	1398, 1499, 1661
TspGWI	ACGGA	2 cut(s)	408, 434
TspRI	CASTG	5 cut(s)	784, 1156, 2192, 2875, 3192
Van91I	CCANNNNNTGG	1 cut(s)	2493
Vha464I	CTTAAG	1 cut(s)	919
VpaK11BI	GGWCC	5 cut(s)	602, 1649, 2141, 2537, 2603
VspI	ATTAAT	1 cut(s)	972
XagI	CCTNNNNNAGG	1 cut(s)	996
XapI	RAATTY	7 cut(s)	541, 560, 1561, 2035, 2795, 2926, 3203
XceI	RCATGY	3 cut(s)	837, 2157, 3128
XcmI	CCANNNNNNNNNTGG	2 cut(s)	2192, 3043
XhoI	CTCGAG	1 cut(s)	546
XmiI	GTMKAC	1 cut(s)	1905
XmnI	GAANNNNTTC	2 cut(s)	306, 2282
XspI	CTAG	8 cut(s)	455, 536, 761, 936, 1242, 1454, 2202, 2360
ZraI	GACGTC	1 cut(s)	1187
Zsp2I	ATGCAT	4 cut(s)	835, 1225, 2472, 3005

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.