Rh4DG249000

phospholipase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Forward (+)
46210883 .. 46220100
9218 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG249000.1

Sequence Viewer

Length: 3057 bp
ATGGAATCGGAGCAGTTGATATCATCGACGGGGAGCGGTTCCCGGTATATGCAAATGCGATCGGAGCAGTTAACGTCGCCGTCGTCGCTGTTATCGTTCCGGCACTCGTCCTTCGAGCCGCCGCGGATTTTCGACGAGTTGCCCAGCGCCACCATCGTCTCCGTCTCCCGCCCCGACGCCGGCGATATCAGCCCCATGCTTCTCTCCTACACTATCGAGTTCCAATACAAGCAGTTTAAGTGGCGCCTATTGAAGAAAGCATCACAAGTATTCTACTTGCATTTTGCGTTGAAGAAACGGGCATTTATTGAGGAAATTCACGAAAAGCAGGAACAGGTTAAAGAATGGCTTCAAAATCTAGGAATAGGAGATCATACGGACGTCGTGCACGATGATGAGGATATTGATGATGAGACTGTCCCCCTGCATCACAATGATGAAAGTGCTAAAAACAGAGATGTTCCATCTAGTGCCGCTCTACCAATCATTCAGCCAGCCCTTGGTAGGCAGCAATCCATTTCGGACAGATCAAAGATTGCAATGCAAGGATATCTTAATCACTTTCTTGGAAACATGGACATTGTGAACTCTCAAGAGGTCTGCAAGTTTTTGGAGGTCTCTATGCTATCATTTTCCCCAGAATATGGCCCTAAGCTGAAAGAAGATTTTGTAATGGTGGAACATCTACCAAAATTGCCAAAGAATGATCCTTCCAGGAAATGTTGCTCGTGTCGTTGGTTCAGTTGTTGTAATGACAACTGGCAAAAGGTTTGGGCTGTATTAAAACCAGGATTCTTGGCCTTTCTGGCAGATCCTTTTGATACCCAACCTTTAGACATAATAGTATTTGATGTACTACCAGCCTCGGATGGTAATGGGGATGGCCGTGTATCACTAGCGAAAGAGATAAAAGATAGAAATCCACTACGCCATGCCTTTCAGGTGGCTTGTGGAAGCCGGAGCATTAAATTAAGAGTTAGGAGTAGTAGTAAAGTTAAAGATTGGGTAGCGTCAATCAATGATGCGGGACTCAGGCCTCCTGAAGGTTGGTGTCATCCTCACCGCTTTGGCTCCTTTGCGCCTCCAAGAGGCTTGACTGAAGATGGTAGTCAGGCTCAATGGTTTGTAGATGGTCGGGCGGCATTTGAAGCTATTGCTTCTGCAATTGAGGCTGCAAAATCAGAGATATTTATTTGTGGTTGGTGGCTGTGTCCAGAATTGTACATGCGGCGTCCGTTTCTTACTCATGCTTCTTCTAAACTTGATTCTCTGCTGGAAGCAAAAGCTAAGGAAGGGGTTCAGATTTACATTCTTCTCTATAAAGAGGTAGCTCTTGCTCTGAAAATCAACAGCGTTTATAGCAAGAGAAAACTTCTTGGGATTCATGAGAATGTGAGGGTATTACGTTATCCTGACCACTTCTCTAGTGGTGTTTACTTATGGTCCCACCATGAAAAACTTGTCATTGTTGATCATCAGATTTGCTTTGTTGGAGGACTTGATTTATGCTTTGGTCGTTATGATACTGCTGAACATAAAGTGGGTGACTGCCCTCCTAACATTTGGCCTGGAAAGGACTATTACAACCCCAGGGAATCTGAACCAAACTCATGGGAGGATACAATGAGAGATGAGTTGGACCGTGAAAAATATCCTCGCATGCCTTGGCATGATGTCCACTGTGCTATTTGGGGACCTCCTTGCCGTGATGTAGCTAGGCATTTCGTTCAGCGGTGGAACTATGCAAAGAGAAATAAAGCTCCAAATGAGCAGGCAATTCCACTACTTATGCCGCAACAGCACATGGTAATTCCTCATTACATGGGGAAAAGCTCAGATGTGGAGATTGAAAATGAGAATGCCAGCAATAGTAAAGACATTAAAAGGCAGGATTCCTTTTCGTCGAAATCATCCTATCAGGATATCCCCTTGCTTATACCTCAAGAGGCTGATGGGTTGAATGAAAACCCTAGACCATATGGGGTGGACTCTGCTCATTGCTTCGATCAGCCAAGCAGAGTTGGTAACAATCTTGCTTTCCCTTTTCGGAAGACAAAAATTGAACCAGTAGGTCCAGATACGCCAATGAGGGGATTTGTAGATGACTTTGAATCTATGGATCGACATGGGAAATTGGCTGCAGACATGGTGGCACGTCCTGCAATCACAAATTCAGATCCAGAGTGGTGGGAAATACAAGAACGGGGAAATGAGGGTGGTTTCACAGATGAATCAGGACAAGTTGGTCCTTCTAGTTCATGCCGTTGTCAGGTTATCAGAAGTGTCAGTCAGTGGTCAGCAGGAACAAGCCAAGTTGAAGATAGCATTCACAGTGCTTATTGTTCTCTTATCGATAAAGCTGAGCACTTTATTTACATTGAGAATCAATTTTTCATCTCAGGTCTTTCAGGAGATGAAATAATACGGAATCGTGTGTTAGAAGCATTATTCCGTCGTATTATGCGAGCATACAATGATAAGAAGTGTTTTAGAATTATAATTGTCATACCACTCGTACCTGGTTTTCAAGGTGGTTTGGATGATGCTGGCGCGGCATCTGTGAGAGCTGTTATGCATTGGCAATATCGAACCATTTGCAGAGGGCATAATTCAATTCTACACAATTTATATGAACTTCTTGGTCCAAAGACACACAACTACATTTCTTTCTATGGCCTTAGAGCCTATGGTAAACTCTTTGATGGCGGTCCTGTGGCCTCCAGTCAGGTGTATGTGCATAGTAAAATCATGATTGTCGATGATTGTACAACTATAATTGGATCAGCTAACATCAATGATAGGAGTTTGCTTGGTTCAAGAGATTCTGAGATTGGTCTTCTTATTGAAGACAAAGAGTTGGTTAATTCATATATGGGAGGAAAACCATGGAAGGCTGGAAAATTTTCATTGAGTCTTCGCATGTCGCTATGGTCTGAACATCTTGGTATTCGCACTGGAGAGATGGACCAAATAATCGATCCAACTGTTGATTCAACTTACAAGGATATATGGATGGAGACAGCTAAGGTGGGAAAAAGTAGGAAAAAAGTATTATGA

Protein Analysis

1018

Amino Acids

115.48

Weight (kDa)

6.3

Isoelectric Point (pI)

46.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PLDc PF00614 479 - 506 8.7e-08 Phospholipase D Active site motif
PLDc_2 PF13091 891 - 957 3.9e-09 PLD-like domain
PLDc PF00614 912 - 935 2.1e-06 Phospholipase D Active site motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2498
AasI GACNNNNNNGTC 1 cut(s) 2244
AatII GACGTC 1 cut(s) 384
AccB1I GGYRCC 1 cut(s) 243
AccB7I CCANNNNNTGG 2 cut(s) 500, 644
AccBSI CCGCTC 2 cut(s) 36, 476
AccII CGCG 2 cut(s) 124, 2552
AclWI GGATC 6 cut(s) 701, 806, 2127, 2171, 2788, 2972
AcoI YGGCCR 1 cut(s) 883
AcsI RAATTY 3 cut(s) 315, 2170, 2900
AcuI CTGAAG 2 cut(s) 1062, 1119
AcyI GRCGYC 4 cut(s) 177, 244, 381, 1231
AfaI GTAC 4 cut(s) 855, 1223, 2517, 2767
AfiI CCNNNNNNNGG 8 cut(s) 179, 500, 504, 644, 1043, 1088, 2090, 2269
AjiI CACGTC 1 cut(s) 2156
AjnI CCWGG 5 cut(s) 713, 787, 1567, 1589, 2518
AjuI GAANNNNNNNTTGG 2 cut(s) 2974, 3006
Alw21I GWGCWC 2 cut(s) 390, 2367
Alw26I GTCTC 5 cut(s) 163, 169, 407, 622, 3011
Alw44I GTGCAC 1 cut(s) 386
AlwI GGATC 6 cut(s) 701, 806, 2127, 2171, 2788, 2972
AoxI GGCC 7 cut(s) 646, 798, 883, 1034, 1565, 2674, 2715
ApaLI GTGCAC 1 cut(s) 386
ApeKI GCWGC 3 cut(s) 508, 1172, 2138
ApoI RAATTY 3 cut(s) 315, 2170, 2900
Asp700I GAANNNNTTC 3 cut(s) 348, 1296, 2902
AspLEI GCGC 4 cut(s) 149, 246, 1081, 2552
AspS9I GGNCC 9 cut(s) 647, 1443, 1639, 1694, 2072, 2246, 2642, 2708, 2965
AsuC2I CCSGG 1 cut(s) 43
AsuHPI GGTGA 2 cut(s) 1052, 1556
AvaII GGWCC 8 cut(s) 1443, 1639, 1694, 2072, 2246, 2642, 2708, 2965
BaeGI GKGCMC 1 cut(s) 390
BanI GGYRCC 1 cut(s) 243
BauI CACGAG 1 cut(s) 727
BbsI GAAGAC 4 cut(s) 2057, 2828, 2853, 2906
Bbv12I GWGCWC 2 cut(s) 390, 2367
BbvI GCAGC 3 cut(s) 520, 1159, 2125
BceAI ACGGC 4 cut(s) 64, 870, 1689, 2247
BcgI CGANNNNNNTGC 2 cut(s) 2577, 2611
BciT130I CCWGG 5 cut(s) 715, 789, 1569, 1591, 2520
BciVI GTATCC 1 cut(s) 1612
BclI TGATCA 1 cut(s) 1471
BcnI CCSGG 1 cut(s) 43
BcoDI GTCTC 5 cut(s) 163, 169, 407, 622, 3011
BfaI CTAG 7 cut(s) 359, 468, 896, 1425, 1716, 1971, 2253
BfmI CTRYAG 1 cut(s) 2139
BfoI RGCGCY 2 cut(s) 150, 247
BfuI GTATCC 1 cut(s) 1612
BglI GCCNNNNNGGC 1 cut(s) 806
BlpI GCTNAGC 1 cut(s) 2361
Bme1390I CCNGG 6 cut(s) 43, 715, 789, 1569, 1591, 2520
Bme18I GGWCC 8 cut(s) 1443, 1639, 1694, 2072, 2246, 2642, 2708, 2965
BmgBI CACGTC 1 cut(s) 2156
BmgT120I GGNCC 9 cut(s) 647, 1443, 1639, 1694, 2072, 2246, 2642, 2708, 2965
BmiI GGNNCC 5 cut(s) 40, 245, 1072, 1445, 1695
BmrFI CCNGG 6 cut(s) 43, 715, 789, 1569, 1591, 2520
BmsI GCATC 5 cut(s) 269, 436, 1012, 2533, 2564
BpiI GAAGAC 4 cut(s) 2057, 2828, 2853, 2906
BpmI CTGGAG 2 cut(s) 2704, 2976
Bpu10I CCTNAGC 3 cut(s) 651, 1287, 3024
Bpu1102I GCTNAGC 1 cut(s) 2361
BpuEI CTTGAG 2 cut(s) 576, 1926
BpuMI CCSGG 1 cut(s) 43
Bsa29I ATCGAT 2 cut(s) 2352, 2976
BsaBI GATNNNNATC 1 cut(s) 918
BsaHI GRCGYC 4 cut(s) 177, 244, 381, 1231
BsaI GGTCTC 1 cut(s) 622
BsaJI CCNNGG 7 cut(s) 122, 499, 864, 1589, 1590, 1664, 2885
BsaXI ACNNNNNCTCC 2 cut(s) 973, 1003
Bsc4I CCNNNNNNNGG 8 cut(s) 179, 500, 504, 644, 1043, 1088, 2090, 2269
Bse118I RCCGGY 1 cut(s) 179
Bse1I ACTGG 4 cut(s) 764, 2066, 2721, 2959
Bse3DI GCAATG 2 cut(s) 546, 1996
Bse8I GATNNNNATC 1 cut(s) 918
BseBI CCWGG 5 cut(s) 715, 789, 1569, 1591, 2520
BseCI ATCGAT 2 cut(s) 2352, 2976
BseDI CCNNGG 7 cut(s) 122, 499, 864, 1589, 1590, 1664, 2885
BseGI GGATG 6 cut(s) 874, 886, 1054, 1910, 2545, 3018
BseJI GATNNNNATC 1 cut(s) 918
BseLI CCNNNNNNNGG 8 cut(s) 179, 500, 504, 644, 1043, 1088, 2090, 2269
BseMI GCAATG 2 cut(s) 546, 1996
BseMII CTCAG 5 cut(s) 1045, 1848, 2352, 2412, 2817
BseNI ACTGG 4 cut(s) 764, 2066, 2721, 2959
BseSI GKGCMC 1 cut(s) 390
BseXI GCAGC 3 cut(s) 520, 1159, 2125
BseYI CCCAGC 1 cut(s) 143
Bsh1236I CGCG 2 cut(s) 124, 2552
Bsh1285I CGRYCG 1 cut(s) 62
BshFI GGCC 7 cut(s) 648, 800, 885, 1036, 1567, 2676, 2717
BshNI GGYRCC 1 cut(s) 243
BshVI ATCGAT 2 cut(s) 2352, 2976
BsiEI CGRYCG 1 cut(s) 62
BsiHKAI GWGCWC 2 cut(s) 390, 2367
BsiSI CCGG 4 cut(s) 43, 100, 180, 958
BslFI GGGAC 4 cut(s) 404, 1041, 1429, 1707
BslI CCNNNNNNNGG 8 cut(s) 179, 500, 504, 644, 1043, 1088, 2090, 2269
BsmAI GTCTC 5 cut(s) 163, 169, 407, 622, 3011
BsmBI CGTCTC 2 cut(s) 163, 169
BsmFI GGGAC 4 cut(s) 404, 1041, 1429, 1707
BsmI GAATGC 2 cut(s) 1864, 2325
BsnI GGCC 7 cut(s) 648, 800, 885, 1036, 1567, 2676, 2717
Bso31I GGTCTC 1 cut(s) 622
Bsp1286I GDGCHC 2 cut(s) 390, 2367
Bsp1407I TGTACA 2 cut(s) 1221, 2765
Bsp1720I GCTNAGC 1 cut(s) 2361
Bsp19I CCATGG 1 cut(s) 2885
BspANI GGCC 7 cut(s) 648, 800, 885, 1036, 1567, 2676, 2717
BspCNI CTCAG 5 cut(s) 1044, 1847, 2353, 2411, 2818
BspDI ATCGAT 2 cut(s) 2352, 2976
BspFNI CGCG 2 cut(s) 124, 2552
BspHI TCATGA 2 cut(s) 1384, 2748
BspLI GGNNCC 5 cut(s) 40, 245, 1072, 1445, 1695
BspMAI CTGCAG 1 cut(s) 2143
BspPI GGATC 6 cut(s) 701, 806, 2127, 2171, 2788, 2972
BspT107I GGYRCC 1 cut(s) 243
BspTNI GGTCTC 1 cut(s) 622
BsrBI CCGCTC 2 cut(s) 36, 476
BsrDI GCAATG 2 cut(s) 546, 1996
BsrFI RCCGGY 1 cut(s) 179
BsrGI TGTACA 2 cut(s) 1221, 2765
BsrI ACTGG 4 cut(s) 764, 2066, 2721, 2959
BssAI RCCGGY 1 cut(s) 179
BssECI CCNNGG 7 cut(s) 122, 499, 864, 1589, 1590, 1664, 2885
BssNI GRCGYC 4 cut(s) 177, 244, 381, 1231
BssSI CACGAG 1 cut(s) 727
BssT1I CCWWGG 3 cut(s) 499, 1664, 2885
Bst2BI CACGAG 1 cut(s) 727
Bst2UI CCWGG 5 cut(s) 715, 789, 1569, 1591, 2520
Bst4CI ACNGT 5 cut(s) 418, 1643, 1682, 2333, 2986
BstACI GRCGYC 4 cut(s) 177, 244, 381, 1231
BstAPI GCANNNNNTGC 1 cut(s) 2159
BstAUI TGTACA 2 cut(s) 1221, 2765
BstC8I GCNNGC 7 cut(s) 181, 495, 1661, 1773, 1864, 2466, 2548
BstDEI CTNAG 9 cut(s) 651, 1031, 1287, 1834, 2361, 2398, 2678, 2826, 3024
BstDSI CCRYGG 2 cut(s) 122, 2885
BstENI CCTNNNNNAGG 2 cut(s) 1041, 1086
BstF5I GGATG 6 cut(s) 874, 886, 1054, 1910, 2545, 3018
BstFNI CGCG 2 cut(s) 124, 2552
BstH2I RGCGCY 2 cut(s) 150, 247
BstHHI GCGC 4 cut(s) 149, 246, 1081, 2552
BstMAI GTCTC 5 cut(s) 163, 169, 407, 622, 3011
BstMCI CGRYCG 1 cut(s) 62
BstNI CCWGG 5 cut(s) 715, 789, 1569, 1591, 2520
BstNSI RCATGY 3 cut(s) 1228, 1663, 2923
BstSCI CCNGG 6 cut(s) 41, 713, 787, 1567, 1589, 2518
BstSFI CTRYAG 1 cut(s) 2139
BstSLI GKGCMC 1 cut(s) 390
BstUI CGCG 2 cut(s) 124, 2552
BstV1I GCAGC 3 cut(s) 520, 1159, 2125
BstV2I GAAGAC 4 cut(s) 2057, 2828, 2853, 2906
BstX2I RGATCY 2 cut(s) 811, 2176
BstXI CCANNNNNNTGG 2 cut(s) 1611, 2187
BstYI RGATCY 2 cut(s) 811, 2176
Bsu15I ATCGAT 2 cut(s) 2352, 2976
BsuI GTATCC 1 cut(s) 1612
BsuRI GGCC 7 cut(s) 648, 800, 885, 1036, 1567, 2676, 2717
BsuTUI ATCGAT 2 cut(s) 2352, 2976
BtgI CCRYGG 2 cut(s) 122, 2885
BtrI CACGTC 1 cut(s) 2156
BtsCI GGATG 6 cut(s) 874, 886, 1054, 1910, 2545, 3018
BtsIMutI CAGTG 4 cut(s) 1678, 2297, 2338, 2952
Cac8I GCNNGC 7 cut(s) 181, 495, 1661, 1773, 1864, 2466, 2548
CciI TCATGA 2 cut(s) 1384, 2748
CfoI GCGC 4 cut(s) 149, 246, 1081, 2552
Cfr10I RCCGGY 1 cut(s) 179
Cfr13I GGNCC 9 cut(s) 647, 1443, 1639, 1694, 2072, 2246, 2642, 2708, 2965
Cfr42I CCGCGG 1 cut(s) 125
ClaI ATCGAT 2 cut(s) 2352, 2976
CseI GACGC 3 cut(s) 185, 999, 1220
CsiI ACCWGGT 1 cut(s) 2518
Csp6I GTAC 4 cut(s) 854, 1222, 2516, 2766
CviQI GTAC 4 cut(s) 854, 1222, 2516, 2766
DdeI CTNAG 9 cut(s) 651, 1031, 1287, 1834, 2361, 2398, 2678, 2826, 3024
DinI GGCGCC 1 cut(s) 245
DrdI GACNNNNNNGTC 1 cut(s) 2244
DseDI GACNNNNNNGTC 1 cut(s) 2244
EaeI YGGCCR 1 cut(s) 883
Eco130I CCWWGG 3 cut(s) 499, 1664, 2885
Eco147I AGGCCT 1 cut(s) 1036
Eco31I GGTCTC 1 cut(s) 622
Eco32I GATATC 4 cut(s) 21, 187, 551, 1924
Eco47I GGWCC 8 cut(s) 1443, 1639, 1694, 2072, 2246, 2642, 2708, 2965
Eco57I CTGAAG 2 cut(s) 1062, 1119
EcoNI CCTNNNNNAGG 2 cut(s) 1041, 1086
EcoO109I RGGNCCY 1 cut(s) 1694
EcoRII CCWGG 5 cut(s) 713, 787, 1567, 1589, 2518
EcoRV GATATC 4 cut(s) 21, 187, 551, 1924
EcoT14I CCWWGG 3 cut(s) 499, 1664, 2885
EcoT22I ATGCAT 1 cut(s) 2577
EgeI GGCGCC 1 cut(s) 245
EheI GGCGCC 1 cut(s) 245
ErhI CCWWGG 3 cut(s) 499, 1664, 2885
Esp3I CGTCTC 2 cut(s) 163, 169
FalI AAGNNNNNCTT 4 cut(s) 333, 365, 537, 569
FaqI GGGAC 4 cut(s) 404, 1041, 1429, 1707
FauI CCCGC 2 cut(s) 176, 1018
FauNDI CATATG 1 cut(s) 1978
FbaI TGATCA 1 cut(s) 1471
FokI GGATG 6 cut(s) 881, 893, 1041, 1897, 2552, 3025
FspBI CTAG 7 cut(s) 359, 468, 896, 1425, 1716, 1971, 2253
GlaI GCGC 4 cut(s) 148, 245, 1080, 2551
GsaI CCCAGC 1 cut(s) 147
GsuI CTGGAG 2 cut(s) 2704, 2976
HaeII RGCGCY 2 cut(s) 150, 247
HaeIII GGCC 7 cut(s) 648, 800, 885, 1036, 1567, 2676, 2717
HapII CCGG 4 cut(s) 43, 100, 180, 958
HgaI GACGC 3 cut(s) 185, 999, 1220
HhaI GCGC 4 cut(s) 149, 246, 1081, 2552
Hin1I GRCGYC 4 cut(s) 177, 244, 381, 1231
Hin6I GCGC 4 cut(s) 147, 244, 1079, 2550
HinP1I GCGC 4 cut(s) 147, 244, 1079, 2550
HincII GTYRAC 1 cut(s) 72
HindII GTYRAC 1 cut(s) 72
HpaI GTTAAC 1 cut(s) 72
HpaII CCGG 4 cut(s) 43, 100, 180, 958
HphI GGTGA 2 cut(s) 1052, 1556
Hpy166II GTNNAC 7 cut(s) 72, 388, 586, 1435, 1678, 1987, 2693
Hpy8I GTNNAC 7 cut(s) 72, 388, 586, 1435, 1678, 1987, 2693
Hpy99I CGWCG 9 cut(s) 31, 79, 85, 88, 137, 179, 386, 1906, 2457
HpyAV CCTTC 6 cut(s) 121, 720, 1037, 1286, 2259, 2884
HpyCH4III ACNGT 5 cut(s) 418, 1643, 1682, 2333, 2986
HpyCH4IV ACGT 4 cut(s) 74, 381, 1405, 2155
HpyF3I CTNAG 9 cut(s) 651, 1031, 1287, 1834, 2361, 2398, 2678, 2826, 3024
HpySE526I ACGT 4 cut(s) 74, 381, 1405, 2155
Hsp92I GRCGYC 4 cut(s) 177, 244, 381, 1231
HspAI GCGC 4 cut(s) 147, 244, 1079, 2550
KasI GGCGCC 1 cut(s) 243
KroI GCCGGC 1 cut(s) 179
KroNI GCCGGC 1 cut(s) 181
Ksp22I TGATCA 1 cut(s) 1471
KspAI GTTAAC 1 cut(s) 72
KspI CCGCGG 1 cut(s) 125
LmnI GCTCC 6 cut(s) 10, 33, 64, 960, 1076, 1765
Lsp1109I GCAGC 3 cut(s) 520, 1159, 2125
LweI GCATC 5 cut(s) 269, 436, 1012, 2533, 2564
MabI ACCWGGT 1 cut(s) 2518
MaeI CTAG 7 cut(s) 359, 468, 896, 1425, 1716, 1971, 2253
MaeII ACGT 4 cut(s) 74, 381, 1405, 2155
MaeIII GTNAC 2 cut(s) 1544, 2024
MbiI CCGCTC 2 cut(s) 36, 476
MfeI CAATTG 1 cut(s) 1164
MflI RGATCY 2 cut(s) 811, 2176
MhlI GDGCHC 2 cut(s) 390, 2367
Mly113I GGCGCC 1 cut(s) 244
MlyI GAGTC 3 cut(s) 1023, 1982, 2920
MmeI TCCRAC 3 cut(s) 1471, 1617, 3005
Mph1103I ATGCAT 1 cut(s) 2577
MreI CGCCGGCG 1 cut(s) 179
MroNI GCCGGC 1 cut(s) 179
MroXI GAANNNNTTC 3 cut(s) 348, 1296, 2902
MslI CAYNNNNRTG 4 cut(s) 393, 432, 435, 1389
MspA1I CMGCKG 2 cut(s) 124, 1732
MspI CCGG 4 cut(s) 43, 100, 180, 958
MspR9I CCNGG 6 cut(s) 43, 715, 789, 1569, 1591, 2520
MunI CAATTG 1 cut(s) 1164
Mva1269I GAATGC 2 cut(s) 1864, 2325
MvaI CCWGG 5 cut(s) 715, 789, 1569, 1591, 2520
MvnI CGCG 2 cut(s) 124, 2552
NaeI GCCGGC 1 cut(s) 181
NarI GGCGCC 1 cut(s) 244
NciI CCSGG 1 cut(s) 43
NcoI CCATGG 1 cut(s) 2885
NdeI CATATG 1 cut(s) 1978
NgoMIV GCCGGC 1 cut(s) 179
NlaIV GGNNCC 5 cut(s) 40, 245, 1072, 1445, 1695
NmuCI GTSAC 1 cut(s) 1544
NsiI ATGCAT 1 cut(s) 2577
NspI RCATGY 3 cut(s) 1228, 1663, 2923
PaeI GCATGC 1 cut(s) 1663
PagI TCATGA 2 cut(s) 1384, 2748
PasI CCCWGGG 1 cut(s) 1590
PceI AGGCCT 1 cut(s) 1036
PcsI WCGNNNNNNNCGW 4 cut(s) 80, 92, 387, 2461
PctI GAATGC 2 cut(s) 1864, 2325
PdiI GCCGGC 1 cut(s) 181
PdmI GAANNNNTTC 3 cut(s) 348, 1296, 2902
PflMI CCANNNNNTGG 2 cut(s) 500, 644
PfoI TCCNGGA 1 cut(s) 713
Ple19I CGATCG 1 cut(s) 62
PleI GAGTC 3 cut(s) 1023, 1982, 2919
PluTI GGCGCC 1 cut(s) 247
PpsI GAGTC 3 cut(s) 1023, 1982, 2919
PpuMI RGGWCCY 1 cut(s) 1694
PsiI TTATAA 1 cut(s) 2498
Psp5II RGGWCCY 1 cut(s) 1694
Psp6I CCWGG 5 cut(s) 713, 787, 1567, 1589, 2518
PspFI CCCAGC 1 cut(s) 143
PspGI CCWGG 5 cut(s) 713, 787, 1567, 1589, 2518
PspN4I GGNNCC 5 cut(s) 40, 245, 1072, 1445, 1695
PspPI GGNCC 9 cut(s) 647, 1443, 1639, 1694, 2072, 2246, 2642, 2708, 2965
PspPPI RGGWCCY 1 cut(s) 1694
PstI CTGCAG 1 cut(s) 2143
PsuI RGATCY 2 cut(s) 811, 2176
PvuI CGATCG 1 cut(s) 62
RsaI GTAC 4 cut(s) 855, 1223, 2517, 2767
RsaNI GTAC 4 cut(s) 854, 1222, 2516, 2766
RseI CAYNNNNRTG 4 cut(s) 393, 432, 435, 1389
SacII CCGCGG 1 cut(s) 125
Sau96I GGNCC 9 cut(s) 647, 1443, 1639, 1694, 2072, 2246, 2642, 2708, 2965
SchI GAGTC 3 cut(s) 1023, 1982, 2920
ScrFI CCNGG 6 cut(s) 43, 715, 789, 1569, 1591, 2520
SduI GDGCHC 2 cut(s) 390, 2367
SexAI ACCWGGT 1 cut(s) 2518
SfaNI GCATC 5 cut(s) 269, 436, 1012, 2533, 2564
SfcI CTRYAG 1 cut(s) 2139
SfoI GGCGCC 1 cut(s) 245
Sfr303I CCGCGG 1 cut(s) 125
SgrAI CRCCGGYG 1 cut(s) 179
SgrBI CCGCGG 1 cut(s) 125
SinI GGWCC 8 cut(s) 1443, 1639, 1694, 2072, 2246, 2642, 2708, 2965
SmiMI CAYNNNNRTG 4 cut(s) 393, 432, 435, 1389
SmlI CTYRAG 2 cut(s) 591, 1941
SmoI CTYRAG 2 cut(s) 591, 1941
SphI GCATGC 1 cut(s) 1663
SseBI AGGCCT 1 cut(s) 1036
SspDI GGCGCC 1 cut(s) 243
SspMI CTAG 7 cut(s) 359, 468, 896, 1425, 1716, 1971, 2253
StuI AGGCCT 1 cut(s) 1036
StyD4I CCNGG 6 cut(s) 41, 713, 787, 1567, 1589, 2518
StyI CCWWGG 3 cut(s) 499, 1664, 2885
TaaI ACNGT 5 cut(s) 418, 1643, 1682, 2333, 2986
TaiI ACGT 4 cut(s) 77, 384, 1408, 2158
TatI WGTACW 3 cut(s) 853, 1221, 2765
TauI GCSGC 7 cut(s) 121, 124, 476, 1142, 1231, 1795, 2555
TscAI CASTG 4 cut(s) 1685, 2297, 2338, 2959
TseFI GTSAC 1 cut(s) 1544
TseI GCWGC 3 cut(s) 508, 1172, 2138
Tsp45I GTSAC 1 cut(s) 1544
TspGWI ACGGA 5 cut(s) 151, 392, 1224, 2440, 2441
TspRI CASTG 4 cut(s) 1685, 2297, 2338, 2959
Van91I CCANNNNNTGG 2 cut(s) 500, 644
VneI GTGCAC 1 cut(s) 386
VpaK11BI GGWCC 8 cut(s) 1443, 1639, 1694, 2072, 2246, 2642, 2708, 2965
XagI CCTNNNNNAGG 2 cut(s) 1041, 1086
XapI RAATTY 3 cut(s) 315, 2170, 2900
XceI RCATGY 3 cut(s) 1228, 1663, 2923
XcmI CCANNNNNNNNNTGG 1 cut(s) 1424
XmnI GAANNNNTTC 3 cut(s) 348, 1296, 2902
XspI CTAG 7 cut(s) 359, 468, 896, 1425, 1716, 1971, 2253
ZraI GACGTC 1 cut(s) 382
Zsp2I ATGCAT 1 cut(s) 2577
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.