RLG00000025302

phospholipase D

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Reverse (-)
43736936 .. 43743553
6618 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000025302

Sequence Viewer

Length: 3300 bp
ATGTCGTCGGAGAAGCTCATTGGCAAGGGTGCCGTACACTCCGACTCGTTCCGGCAATGCTGGGAGATGGTGCCGATTTTTGAAGAGTTGCCGGTGGCCACTATCGTATCGGTGTCGCGCCCCGATACCGGAGATATCAGCCCCATGCTCTTGTCTTACACAATTGAGTTTCAGTACAAACAGCAGTTCAAGTGGCGGTTACTGAAGAAAGCATCACAAGTTCTCTATCTACATTTTGCATTGAAGAAACGCGCAATAATTGAGGAGATCCATGAGAAACAAGAGCAGGTTAAAGAATGGCTCCACAGCATAGGAATAGCAGATCAGACAGCAGTAGTGGAAGATGATGATGAACCAGATGATGGGGCTGTTCCTTTACATAATGAAGATAGTGTTAGAAACAGATATGTTCCATCTCGTGCCGCTTTGCCCATCATCCGTCCAGCACTAGGAGGGCAGCAGTCCATCTCAGACCTAGCAAAGGTGGCAATGCAGGGTTATTTGAACCATTTTTTGGGAAACATGGATCTAGTGAATTGTCGAGAGGTCTGCAAATTTTTGGAGGTTTCACAGTTGTCCTTCTTACAAGAGTATGGACCAAAATTGAAAGAAGGTTATGTCATGGTGAAGCATCTGCCAAAATTTTCAGGGGCCAATTCTGATGTGGCATCTTGTGCTGGCTTTTGTCTGGGTTATTGTAGCAACAATTGGCAAAAGGTCTGGGCTGTTTTAAAACCTGGGTTCTTGGCCTTACTGGATGATCCTTTTGACACTGAACTTCTCGACATTATCGTTTTCAATGCTCTTCCACCCTCGAATGGAAAGGGAGGATCTGAAAATTATTTGGCAAGTCAAATAAAGGAACGAAACCCTTTACGTTATACATTTAGGGTTGCTTCTGGAAATCAAAGCTTAAGGATAAGAACCACTAGCAATGCTAAAGTTAAAGATTGGGTTACTGCAATTAATGATGCTGGCCTAAGGCCTCATGAAGGTTGGTGTCATCCTCATCGCTTCGGTTCCTTTGCTCCTCCCAGGGGTTTGACTGATGATGGGAGTCAAGCTCAGTGGTTTATAGATGGTGAAGCAGCATTTGAAGCTATTGCTTCCTCTATTGAGGGTGCAAAATCAGAGATATTCATTACTGGCTGGTGGCTTTGCCCAGAACTGTATCTAAGACGTCCTTTCAGTAGCAACTCTTCTTCTAGGCTTGATGCATTACTAGAAGCAAAAGCTAAGCAAGGGGTTCAGATTTACATTCTTCTCTACAAGGAGGTTTCTCTTGCTTTAAAGATCAACAGCTTATACAGTAAGAAAAAGCTTTCAAATATTCATGAGAATGTGAGAGTAATGCGCTATCCTGACCGTTTTCCCACAGGAATTTACTTATGGTCACACCATGAAAAACTTGTCATTGTTGATTATCAAATTTGCTACATTGGAGGATTAGATTTGTGCTTTGGCCGTTATGACACGGTTGAACACAAAGTGGGTGACTGCCCTCCTTCTGTATGGCCAGGGAAGGACTATTATAATCCAAGAGAATCTGAACCAAATTCTTGGGAAGATGTAATAAAAGACGAATTGGAGCGTGAAAAAGTTCCGCGTATGCCATGGCATGATGTCCACTGTGCTCTCTGGGGACCTCCTTGTCGTGACATTGCCAGGCACTTTGTTCAGCGGTGGAACCATGCTAAGAGAAACAAAGCTCCAAATGAACAAGCACTTCCACTACTTATGCCTCAACACCACATGGTCATCCCTCATTACATGGGAAGAAGTAGAGAGATAGACATTGAGAAAAGGAAAGTGGAAGAGACCCAGAATGGGATCCAGAGAGAGAACTCCTTTTCCTCTCTAACACCTTTGCAAAATATCCCGTTGCTTTTGCCTCAAGAAGCTGACGGTTTGGAACCTCCTGGTGTAGATCAAAAGTTAAGTGGCCAGCAGATGCATCATTATCCTGTTGACCAGCCAAATGGGATGTCTGGTAGTGTTTCATTATCTTCCAGGAAGCCCAAAGTCAAAGCTTTAGACCCAGATACGCAGATGAATGGTTTGATGGATGATCTTTATTCTATGGATCTTGAAAGTGGAACCAATATATACTCAATGGCCCAATCTGGCTTGACAACTTCAAATGAATGGTCAGAAAGTTCAGAGGAAAGTGATCATGCTGTTGCTGCTGATGACTGTGGACAAACAGGTCCTCGTACTGCTTGCAAATGTCAGGTAATTAGAAGTGTGAGCCAGTGGTCTGCTGGAACTAGCCAAACTGAAGAAAGCATACATAATGCTTATTGCTCTCTCATTGAGAAAGCAGAACACTGTGTGTATATTGAGAATCAATTTTTCATATCAGGTCTTTCAGGGGATGAGATTATACAGAACCGTATCCTGGAAGTACTGTACAGGCGTATTGTTCTAGCACACAAAGAACAAAAGTGTTTTAGGGTTATTGTTGTCATGCCACTCTTGCCTGGCTTTCAGGGTGGCGTGGATGATTATGGTGCAGCAACTGTTAGAGCCATTATGCATTGGCAGTATCGAACCATTTGCTGGGAGAAGTATTCAATACTCCATAAACTTAAAGTTTTGCTTGGTCCTAAGACACATGACTACATTTCTTTCTATGGTCTGAGAACATATGGTAAACTGTTTGAAGATGGCCCTCTATCCACAAGTCAGGTATATGTACACAGTAAAGTGATGATTGTAGATGACCGTGTTGCTTTGATTGGATCATCAAATATTAATGACAGAAGTTTACTTGGATCAAGAGACTCTGAGATTGGTGTAGTTATAGAAGATAAAGAATTTCTTGAATCGTCCATGGCCGGACAGCCTTGGAAGGCTGGAAAGTTTTCTTATAGTCTTAGGTGCTCCCTGTGGTCTGAACACCTGGGTCTTCCTGCAGGAGAGATAAATCAAATCGGCGATCCTGTGTCAGACTCAACATACAAAGATCTGTGGCTAGCGACTGCAAAGGAAAATTCAATTATCTACCAAGATGTATTTTCTTGTATTCCGAATGATTCTATAAACTCAAGAGCTGCTCTCAGAGAATCCATCGCTTTTTGGAAAGAGAAGCTCGGTCACACTACAATTGATCTGGGAATAGCTCCTAAGAAGCTAGAATCCTGGGAGAATGGAGAGATTAAAGAAACAGATCCAATGGAAAGATTGAAACATATAAGGGGACATCTTGTTTCCTTTCCTTTAGAGTTTATGAACCAAGAAGATTTGAGACCAGTGTTTAATGAAAGTGAATTTTATACATCTCCTCAAGTATTTATGTAA

Protein Analysis

1100

Amino Acids

124.46

Weight (kDa)

5.88

Isoelectric Point (pI)

45.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PLDc PF00614 462 - 489 6.2e-07 Phospholipase D Active site motif
PLDc_2 PF13091 864 - 942 6.2e-09 PLD-like domain
PLDc PF00614 899 - 922 1.4e-07 Phospholipase D Active site motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1533
AasI GACNNNNNNGTC 2 cut(s) 1650, 2205
AatII GACGTC 1 cut(s) 1183
Acc36I ACCTGC 1 cut(s) 277
AccB1I GGYRCC 2 cut(s) 29, 70
AccB7I CCANNNNNTGG 3 cut(s) 362, 514, 2559
AccII CGCG 3 cut(s) 118, 252, 1606
AciI CCGC 4 cut(s) 196, 423, 1604, 1681
AcoI YGGCCR 5 cut(s) 96, 1462, 1514, 1942, 2835
AcsI RAATTY 8 cut(s) 554, 641, 1380, 1428, 1555, 2816, 2992, 3269
AcuI CTGAAG 2 cut(s) 224, 2298
AcyI GRCGYC 1 cut(s) 1180
AdeI CACNNNGTG 2 cut(s) 1489, 2332
AfaI GTAC 6 cut(s) 36, 176, 2215, 2406, 2411, 2697
AflII CTTAAG 1 cut(s) 913
AjuI GAANNNNNNNTTGG 2 cut(s) 497, 529
AloI GAACNNNNNNTCC 2 cut(s) 1835, 1867
Alw21I GWGCWC 2 cut(s) 1636, 2885
Alw26I GTCTC 3 cut(s) 1811, 2775, 3241
AlwNI CAGNNNCTG 1 cut(s) 2519
ApeKI GCWGC 5 cut(s) 457, 1088, 2183, 2513, 3053
ApoI RAATTY 8 cut(s) 554, 641, 1380, 1428, 1555, 2816, 2992, 3269
ArsI GACNNNNNNTTYG 4 cut(s) 1970, 2002, 2132, 2164
AseI ATTAAT 2 cut(s) 966, 2754
Asp700I GAANNNNTTC 2 cut(s) 1599, 2863
AspLEI GCGC 3 cut(s) 120, 254, 1356
AspS9I GGNCC 7 cut(s) 596, 651, 1643, 2116, 2207, 2603, 2669
AsuHPI GGTGA 3 cut(s) 637, 1094, 1505
AsuNHI GCTAGC 1 cut(s) 2974
AvaII GGWCC 4 cut(s) 596, 1643, 2207, 2603
AxyI CCTNAGG 1 cut(s) 980
BaeI ACNNNNGTAYC 2 cut(s) 90, 123
BalI TGGCCA 3 cut(s) 98, 1516, 1944
BamHI GGATCC 1 cut(s) 1830
BanI GGYRCC 2 cut(s) 29, 70
BarI GAAGNNNNNNTAC 4 cut(s) 1183, 1215, 2271, 2303
BauI CACGAG 1 cut(s) 417
BbsI GAAGAC 1 cut(s) 2900
Bbv12I GWGCWC 2 cut(s) 1636, 2885
BbvI GCAGC 5 cut(s) 469, 1100, 2170, 2525, 3040
BceAI ACGGC 2 cut(s) 17, 1449
BcgI CGANNNNNNTGC 4 cut(s) 531, 565, 2538, 2572
BciVI GTATCC 1 cut(s) 2405
BclI TGATCA 1 cut(s) 2170
BcoDI GTCTC 3 cut(s) 1811, 2775, 3241
BfmI CTRYAG 1 cut(s) 2913
BfrI CTTAAG 1 cut(s) 913
BfuAI ACCTGC 1 cut(s) 277
BfuI GTATCC 1 cut(s) 2405
BglII AGATCT 1 cut(s) 2965
BisI GCNGC 6 cut(s) 423, 458, 1089, 2184, 2514, 3054
BlpI GCTNAGC 1 cut(s) 1236
BlsI GCNGC 6 cut(s) 424, 459, 1090, 2185, 2515, 3055
BmcAI AGTACT 1 cut(s) 2406
Bme18I GGWCC 4 cut(s) 596, 1643, 2207, 2603
BmgT120I GGNCC 7 cut(s) 596, 651, 1643, 2116, 2207, 2603, 2669
BmsI GCATC 7 cut(s) 221, 640, 677, 961, 1204, 1941, 1963
BmtI GCTAGC 1 cut(s) 2978
BpiI GAAGAC 1 cut(s) 2900
BplI GAGNNNNNCTC 4 cut(s) 1048, 1080, 3042, 3074
Bpu1102I GCTNAGC 1 cut(s) 1236
BpuEI CTTGAG 3 cut(s) 1878, 3031, 3270
BsaHI GRCGYC 1 cut(s) 1180
BsaI GGTCTC 2 cut(s) 1811, 3241
BsaJI CCNNGG 9 cut(s) 737, 1034, 1035, 1517, 1613, 2832, 2846, 2902, 3141
BsaWI WCCGGW 1 cut(s) 128
Bse118I RCCGGY 1 cut(s) 91
Bse1I ACTGG 4 cut(s) 759, 1150, 2251, 3251
Bse21I CCTNAGG 1 cut(s) 980
Bse3DI GCAATG 4 cut(s) 62, 495, 940, 1659
BseDI CCNNGG 9 cut(s) 737, 1034, 1035, 1517, 1613, 2832, 2846, 2902, 3141
BseGI GGATG 8 cut(s) 435, 763, 1003, 1758, 1989, 2071, 2380, 2506
BseMI GCAATG 4 cut(s) 62, 495, 940, 1659
BseMII CTCAG 5 cut(s) 483, 1079, 2630, 2778, 3073
BseNI ACTGG 4 cut(s) 759, 1150, 2251, 3251
BseRI GAGGAG 3 cut(s) 278, 1020, 3273
BseXI GCAGC 5 cut(s) 469, 1100, 2170, 2525, 3040
BseYI CCCAGC 2 cut(s) 60, 2559
BsgI GTGCAG 1 cut(s) 2532
Bsh1236I CGCG 3 cut(s) 118, 252, 1606
BshNI GGYRCC 2 cut(s) 29, 70
BsiHKAI GWGCWC 2 cut(s) 1636, 2885
BsiSI CCGG 4 cut(s) 52, 92, 129, 2838
BslFI GGGAC 2 cut(s) 1656, 3213
BsmAI GTCTC 3 cut(s) 1811, 2775, 3241
BsmFI GGGAC 2 cut(s) 1656, 3213
Bso31I GGTCTC 2 cut(s) 1811, 3241
Bsp1286I GDGCHC 2 cut(s) 1636, 2885
Bsp1407I TGTACA 2 cut(s) 2409, 2695
Bsp1720I GCTNAGC 1 cut(s) 1236
Bsp19I CCATGG 2 cut(s) 1613, 2832
BspACI CCGC 4 cut(s) 196, 423, 1604, 1681
BspCNI CTCAG 5 cut(s) 482, 1078, 2631, 2779, 3072
BspFNI CGCG 3 cut(s) 118, 252, 1606
BspHI TCATGA 2 cut(s) 988, 1333
BspMAI CTGCAG 1 cut(s) 2917
BspMI ACCTGC 1 cut(s) 277
BspOI GCTAGC 1 cut(s) 2978
BspQI GCTCTTC 1 cut(s) 810
BspT107I GGYRCC 2 cut(s) 29, 70
BspTI CTTAAG 1 cut(s) 913
BspTNI GGTCTC 2 cut(s) 1811, 3241
BsrDI GCAATG 4 cut(s) 62, 495, 940, 1659
BsrFI RCCGGY 1 cut(s) 91
BsrGI TGTACA 2 cut(s) 2409, 2695
BsrI ACTGG 4 cut(s) 759, 1150, 2251, 3251
BssAI RCCGGY 1 cut(s) 91
BssECI CCNNGG 9 cut(s) 737, 1034, 1035, 1517, 1613, 2832, 2846, 2902, 3141
BssNI GRCGYC 1 cut(s) 1180
BssSI CACGAG 1 cut(s) 417
BssT1I CCWWGG 3 cut(s) 1613, 2832, 2846
Bst2BI CACGAG 1 cut(s) 417
Bst6I CTCTTC 4 cut(s) 78, 810, 1204, 1809
BstACI GRCGYC 1 cut(s) 1180
BstAFI CTTAAG 1 cut(s) 913
BstAPI GCANNNNNTGC 1 cut(s) 674
BstAUI TGTACA 2 cut(s) 2409, 2695
BstC8I GCNNGC 5 cut(s) 679, 976, 1946, 2221, 2976
BstDSI CCRYGG 2 cut(s) 1613, 2832
BstENI CCTNNNNNAGG 2 cut(s) 479, 990
BstF5I GGATG 8 cut(s) 435, 763, 1003, 1758, 1989, 2071, 2380, 2506
BstFNI CGCG 3 cut(s) 118, 252, 1606
BstHHI GCGC 3 cut(s) 120, 254, 1356
BstMAI GTCTC 3 cut(s) 1811, 2775, 3241
BstMWI GCNNNNNNNGC 5 cut(s) 485, 674, 1097, 2183, 2476
BstSFI CTRYAG 1 cut(s) 2913
BstUI CGCG 3 cut(s) 118, 252, 1606
BstV1I GCAGC 5 cut(s) 469, 1100, 2170, 2525, 3040
BstV2I GAAGAC 1 cut(s) 2900
BstX2I RGATCY 7 cut(s) 267, 526, 830, 1830, 2083, 2965, 3169
BstXI CCANNNNNNTGG 2 cut(s) 1560, 1979
BstYI RGATCY 7 cut(s) 267, 526, 830, 1830, 2083, 2965, 3169
Bsu36I CCTNAGG 1 cut(s) 980
BsuI GTATCC 1 cut(s) 2405
BtgI CCRYGG 2 cut(s) 1613, 2832
BtgZI GCGATG 2 cut(s) 995, 3055
BtsCI GGATG 8 cut(s) 435, 763, 1003, 1758, 1989, 2071, 2380, 2506
BtsIMutI CAGTG 6 cut(s) 771, 1073, 1627, 2258, 2326, 3258
BveI ACCTGC 1 cut(s) 277
Cac8I GCNNGC 5 cut(s) 679, 976, 1946, 2221, 2976
CaiI CAGNNNCTG 1 cut(s) 2519
CciI TCATGA 2 cut(s) 988, 1333
CfoI GCGC 3 cut(s) 120, 254, 1356
Cfr10I RCCGGY 1 cut(s) 91
Cfr13I GGNCC 7 cut(s) 596, 651, 1643, 2116, 2207, 2603, 2669
Csp6I GTAC 6 cut(s) 35, 175, 2214, 2405, 2410, 2696
CspCI CAANNNNNGTGG 2 cut(s) 1049, 1084
CviQI GTAC 6 cut(s) 35, 175, 2214, 2405, 2410, 2696
DraI TTTAAA 2 cut(s) 732, 1290
DraIII CACNNNGTG 2 cut(s) 1489, 2332
DrdI GACNNNNNNGTC 2 cut(s) 1650, 2205
DseDI GACNNNNNNGTC 2 cut(s) 1650, 2205
EaeI YGGCCR 5 cut(s) 96, 1462, 1514, 1942, 2835
Eam1104I CTCTTC 4 cut(s) 78, 810, 1204, 1809
EarI CTCTTC 4 cut(s) 78, 810, 1204, 1809
Eco130I CCWWGG 3 cut(s) 1613, 2832, 2846
Eco147I AGGCCT 1 cut(s) 985
Eco31I GGTCTC 2 cut(s) 1811, 3241
Eco32I GATATC 1 cut(s) 136
Eco47I GGWCC 4 cut(s) 596, 1643, 2207, 2603
Eco57I CTGAAG 2 cut(s) 224, 2298
Eco81I CCTNAGG 1 cut(s) 980
EcoNI CCTNNNNNAGG 2 cut(s) 479, 990
EcoO109I RGGNCCY 2 cut(s) 1643, 2207
EcoRV GATATC 1 cut(s) 136
EcoT14I CCWWGG 3 cut(s) 1613, 2832, 2846
EcoT22I ATGCAT 3 cut(s) 1219, 1956, 2538
ErhI CCWWGG 3 cut(s) 1613, 2832, 2846
FalI AAGNNNNNCTT 6 cut(s) 1168, 1200, 2583, 2615, 2805, 2837
FaqI GGGAC 2 cut(s) 1656, 3213
FauNDI CATATG 1 cut(s) 2647
FbaI TGATCA 1 cut(s) 2170
Fnu4HI GCNGC 6 cut(s) 423, 458, 1089, 2184, 2514, 3054
FokI GGATG 8 cut(s) 422, 770, 990, 1745, 1996, 2078, 2387, 2513
Fsp4HI GCNGC 6 cut(s) 423, 458, 1089, 2184, 2514, 3054
GlaI GCGC 3 cut(s) 119, 253, 1355
GluI GCNGC 6 cut(s) 423, 458, 1089, 2184, 2514, 3054
GsaI CCCAGC 2 cut(s) 64, 2563
HapII CCGG 4 cut(s) 52, 92, 129, 2838
HhaI GCGC 3 cut(s) 120, 254, 1356
Hin1I GRCGYC 1 cut(s) 1180
Hin6I GCGC 3 cut(s) 118, 252, 1354
HinP1I GCGC 3 cut(s) 118, 252, 1354
HincII GTYRAC 1 cut(s) 1969
HindII GTYRAC 1 cut(s) 1969
HindIII AAGCTT 3 cut(s) 910, 1319, 2028
HpaII CCGG 4 cut(s) 52, 92, 129, 2838
HphI GGTGA 3 cut(s) 637, 1094, 1505
Hpy166II GTNNAC 7 cut(s) 37, 1627, 1969, 2198, 2654, 2698, 2768
Hpy8I GTNNAC 7 cut(s) 37, 1627, 1969, 2198, 2654, 2698, 2768
Hpy99I CGWCG 1 cut(s) 10
HpyAV CCTTC 6 cut(s) 589, 605, 986, 1515, 1516, 2845
HpyCH4IV ACGT 2 cut(s) 877, 1180
HpyF10VI GCNNNNNNNGC 5 cut(s) 485, 674, 1097, 2183, 2476
HpySE526I ACGT 2 cut(s) 877, 1180
Hsp92I GRCGYC 1 cut(s) 1180
HspAI GCGC 3 cut(s) 118, 252, 1354
Ksp22I TGATCA 1 cut(s) 2170
LguI GCTCTTC 1 cut(s) 810
LmnI GCTCC 6 cut(s) 306, 1033, 1588, 1714, 2888, 3127
Lsp1109I GCAGC 5 cut(s) 469, 1100, 2170, 2525, 3040
LweI GCATC 7 cut(s) 221, 640, 677, 961, 1204, 1941, 1963
MaeII ACGT 2 cut(s) 877, 1180
MaeIII GTNAC 6 cut(s) 198, 955, 1392, 1493, 1655, 3095
MfeI CAATTG 3 cut(s) 162, 706, 3105
MflI RGATCY 7 cut(s) 267, 526, 830, 1830, 2083, 2965, 3169
MhlI GDGCHC 2 cut(s) 1636, 2885
MlsI TGGCCA 3 cut(s) 98, 1516, 1944
MluNI TGGCCA 3 cut(s) 98, 1516, 1944
MlyI GAGTC 4 cut(s) 38, 1066, 2777, 2945
MmeI TCCRAC 1 cut(s) 66
Mox20I TGGCCA 3 cut(s) 98, 1516, 1944
Mph1103I ATGCAT 3 cut(s) 1219, 1956, 2538
MroXI GAANNNNTTC 2 cut(s) 1599, 2863
MscI TGGCCA 3 cut(s) 98, 1516, 1944
MslI CAYNNNNRTG 1 cut(s) 1338
Msp20I TGGCCA 3 cut(s) 98, 1516, 1944
MspA1I CMGCKG 1 cut(s) 1681
MspCI CTTAAG 1 cut(s) 913
MspI CCGG 4 cut(s) 52, 92, 129, 2838
MunI CAATTG 3 cut(s) 162, 706, 3105
MvnI CGCG 3 cut(s) 118, 252, 1606
MwoI GCNNNNNNNGC 5 cut(s) 485, 674, 1097, 2183, 2476
NcoI CCATGG 2 cut(s) 1613, 2832
NdeI CATATG 1 cut(s) 2647
NheI GCTAGC 1 cut(s) 2974
NmuCI GTSAC 4 cut(s) 1392, 1493, 1655, 3095
NsiI ATGCAT 3 cut(s) 1219, 1956, 2538
PagI TCATGA 2 cut(s) 988, 1333
PasI CCCWGGG 1 cut(s) 1035
PceI AGGCCT 1 cut(s) 985
PciSI GCTCTTC 1 cut(s) 810
PcsI WCGNNNNNNNCGW 1 cut(s) 789
PdmI GAANNNNTTC 2 cut(s) 1599, 2863
PfeI GAWTC 6 cut(s) 1544, 2344, 2825, 3035, 3065, 3137
PflMI CCANNNNNTGG 3 cut(s) 362, 514, 2559
PfoI TCCNGGA 2 cut(s) 2009, 2397
PkrI GCNGC 6 cut(s) 424, 459, 1090, 2185, 2515, 3055
PleI GAGTC 4 cut(s) 38, 1065, 2777, 2945
PpsI GAGTC 4 cut(s) 38, 1065, 2777, 2945
PpuMI RGGWCCY 2 cut(s) 1643, 2207
PshBI ATTAAT 2 cut(s) 966, 2754
PsiI TTATAA 1 cut(s) 1533
Psp5II RGGWCCY 2 cut(s) 1643, 2207
PspFI CCCAGC 2 cut(s) 60, 2559
PspPI GGNCC 7 cut(s) 596, 651, 1643, 2116, 2207, 2603, 2669
PspPPI RGGWCCY 2 cut(s) 1643, 2207
PstI CTGCAG 1 cut(s) 2917
PstNI CAGNNNCTG 1 cut(s) 2519
PsuI RGATCY 7 cut(s) 267, 526, 830, 1830, 2083, 2965, 3169
RsaI GTAC 6 cut(s) 36, 176, 2215, 2406, 2411, 2697
RsaNI GTAC 6 cut(s) 35, 175, 2214, 2405, 2410, 2696
RseI CAYNNNNRTG 1 cut(s) 1338
SapI GCTCTTC 1 cut(s) 810
SatI GCNGC 6 cut(s) 423, 458, 1089, 2184, 2514, 3054
Sau96I GGNCC 7 cut(s) 596, 651, 1643, 2116, 2207, 2603, 2669
SbfI CCTGCAGG 1 cut(s) 2917
ScaI AGTACT 1 cut(s) 2406
SchI GAGTC 4 cut(s) 38, 1066, 2777, 2945
SdaI CCTGCAGG 1 cut(s) 2917
SduI GDGCHC 2 cut(s) 1636, 2885
SfaNI GCATC 7 cut(s) 221, 640, 677, 961, 1204, 1941, 1963
SfcI CTRYAG 1 cut(s) 2913
SinI GGWCC 4 cut(s) 596, 1643, 2207, 2603
SmiMI CAYNNNNRTG 1 cut(s) 1338
SmlI CTYRAG 4 cut(s) 913, 1893, 3046, 3285
SmoI CTYRAG 4 cut(s) 913, 1893, 3046, 3285
Sse8387I CCTGCAGG 1 cut(s) 2917
SseBI AGGCCT 1 cut(s) 985
SsiI CCGC 4 cut(s) 196, 423, 1604, 1681
SspI AATATT 2 cut(s) 1330, 2752
StuI AGGCCT 1 cut(s) 985
StyI CCWWGG 3 cut(s) 1613, 2832, 2846
TaiI ACGT 2 cut(s) 880, 1183
TaqI TCGA 4 cut(s) 541, 783, 815, 2548
TaqII GACCGA 1 cut(s) 3083
TatI WGTACW 4 cut(s) 174, 2404, 2409, 2695
TauI GCSGC 1 cut(s) 425
TfiI GAWTC 6 cut(s) 1544, 2344, 2825, 3035, 3065, 3137
TscAI CASTG 6 cut(s) 778, 1073, 1634, 2258, 2333, 3258
TseFI GTSAC 4 cut(s) 1392, 1493, 1655, 3095
TseI GCWGC 5 cut(s) 457, 1088, 2183, 2513, 3053
Tsp45I GTSAC 4 cut(s) 1392, 1493, 1655, 3095
TspGWI ACGGA 1 cut(s) 428
TspRI CASTG 6 cut(s) 778, 1073, 1634, 2258, 2333, 3258
Van91I CCANNNNNTGG 3 cut(s) 362, 514, 2559
Vha464I CTTAAG 1 cut(s) 913
VpaK11BI GGWCC 4 cut(s) 596, 1643, 2207, 2603
VspI ATTAAT 2 cut(s) 966, 2754
XagI CCTNNNNNAGG 2 cut(s) 479, 990
XapI RAATTY 8 cut(s) 554, 641, 1380, 1428, 1555, 2816, 2992, 3269
XcmI CCANNNNNNNNNTGG 2 cut(s) 661, 2258
XmnI GAANNNNTTC 2 cut(s) 1599, 2863
ZraI GACGTC 1 cut(s) 1181
ZrmI AGTACT 1 cut(s) 2406
Zsp2I ATGCAT 3 cut(s) 1219, 1956, 2538
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.