Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0001645

Physical Location & Seq

Genomic Coordinates Reverse (-)

14342231 .. 14345554

Gene Structure 3324 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1174100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1185 bp

ATGTCGATAAGGAGTTTAATCCAGGACATCAGGTTCTCGCGGTCGCAGCGGGTGGTGCAGGTTTCGGCGGGGAGGCCGGCCGGCGAGGCGGTGGGGGAGCCGTTGATTCAGGTATGCTGGGCTCAGATGCCTCAGGAGTTGCTCAGAGAGGTGCTGGTTAGAATCGAGGCTTCCGAGGACGCTTGGCCGCTGCGGAAGAGCGTGGTCGCCTGCGCCGGTGTCTGCCGGAGTTGGAGGCACCTTACCAAGGAGATCGTCAAGGCGCCAGAGCTCTCTGGGAAGCTGACCTTCCCCATCTCCGTCAAGCAGCCTGGTCCGAGGGATGACCTCGTCCGATGCTTTATCAAACGGAACCGTTCCACCCAAACATATTATCTTTTTCTTGGTTTGACCCATGCTCTAACTGACGAAGGAAAGTTCTTACTTGCTGCGCGAAAGTTTAAACGCCCCACCTGCACTGATTATGTCGTCTCACTACATGTTGATAATATGTCTAAGGGGAGCAGTAACTATATCGGGAAACTGAGATCAAACTTTTTGGGAACAAAGTTCACAATCTTTGATGGGCAGCCGAGTCATTTGGGAGACAAGATTGCAAAAAGCCGCTCCACTAGGCTTGTCAATTTGAAACAAGTTTCCCCTAGGGTCCCTGCTGGCAACTATCCAGTGGCTCAAATCCAGTATGAACTAAATATGATGGGCTCCAGGGGTCCAAGGAGAATGCAGTGTACCATGGATTCGATTCCATCCTCTTCAGTTGAACCTGGAGGAGTGGCCACCACACAGGCAGAGTTTTCACATAATAATGCAGAATTATTTCCATCCCTCCCATTTTTCCGATCGAAATCAAACCGCGTGGAGAGTTTCCTGTCAGGGCCTTTGGCCAGACAGAAAGATGGGGTGCTGGTGTTAAGAAACAAGTCTCCTCGGTGGCATGAGCAACTTCAGTGTTGGTGTTTGAACTTTCATGGACGAGTAACAGTTGCTTCAGTGAAAAACTTTCAGTTGGTGGCTTCTCCAGAAAATGGACCCGCAGGACCAGAACACGAGAAGATCATCCTCCAATTTGGGAAAGTTGGCAAGGATTTATTTACCATGGATTACCGGTATCCAATATCAGCATTCCAGGCATTTTCAATCTGCCTCAGTAGCTTTGACACCAAGATTGCTTCTATAGTGGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005488 GO:0005543 GO:0006355 GO:0008150 GO:0008289 GO:0009605 GO:0009607 GO:0009620 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0035091 GO:0043167 GO:0043168 GO:0043207 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

F-box Tub

Protein Analysis

395

Amino Acids

44.04

Weight (kDa)

9.8

Isoelectric Point (pI)

52.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Tub	PF01167	101 - 387	6.5e-105	Tub family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001645)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47900 AT2G47900 AT2G47900
fragaria_vesca	FvH4_2g24790 FvH4_2g24790 FvH4_4g17170 FvH4_4g17170
malus_domestica	MD03G1277100.v1.1 MD11G1298700.v1.1 MD13G1174100.v1.1 MD16G1175400.v1.1
prunus_persica	Prupe.1G142500_v2.0.a1 Prupe.1G142500_v2.0.a1 Prupe.8G253000_v2.0.a1
pyrus_communis	pycom03g22080 pycom11g26220 pycom16g14710
rosa_chinensis	RchiOBHm_Chr4g0420951 RchiOBHm_Chr5g0065161 RchiOBHm_Chr6g0292621
rosa_laevigata	RLG00000007717 RLG00000012006 RLG00000035763
rosa_multiflora	Rmu_co8302979.1_g000001 Rmu_co8397385.1_g000001 Rmu_sc0000515.1_g000008 Rmu_sc0000956.1_g000003 Rmu_sc0009773.1_g000001 Rmu_sc0009911.1_g000003
rosa_roxburghii	Rroxscaffold_1G00016160 Rroxscaffold_5G00363320 Rroxscaffold_7G00174860
rosa_rugosa	Rorug04G0167300 Rorug04G0167400 Rorug04G0167500 Rorug05G0368900 Rorug06G0228400
rosa_samantha	Rh4AG228500 Rh4BG231700 Rh4CG243400 Rh4DG227100 Rh5DG454900 Rh6AG341700 Rh6BG349000 Rh6CG355900 Rh6DG342000
rosa_wichuraiana	Rw4G019780 Rw5G040100 Rw6G029780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	461
Acc36I	ACCTGC	2 cut(s)	49, 461
AccB1I	GGYRCC	2 cut(s)	237, 262
AccB7I	CCANNNNNTGG	1 cut(s)	1025
AccBSI	CCGCTC	1 cut(s)	606
AccII	CGCG	3 cut(s)	40, 433, 855
AciI	CCGC	9 cut(s)	40, 49, 68, 89, 188, 193, 604, 853, 1032
AcoI	YGGCCR	4 cut(s)	78, 185, 774, 882
AcuI	CTGAAG	3 cut(s)	738, 929, 972
AcyI	GRCGYC	1 cut(s)	263
AfaI	GTAC	1 cut(s)	730
AfiI	CCNNNNNNNGG	2 cut(s)	247, 1025
AflIII	ACRYGT	1 cut(s)	478
AgeI	ACCGGT	1 cut(s)	1104
AgsI	TTSAA	4 cut(s)	628, 761, 961, 1137
AjnI	CCWGG	5 cut(s)	21, 310, 704, 763, 1125
AloI	GAACNNNNNNTCC	2 cut(s)	17, 49
AluBI	AGCT	3 cut(s)	271, 283, 1152
AluI	AGCT	3 cut(s)	271, 283, 1152
Alw21I	GWGCWC	1 cut(s)	273
Alw26I	GTCTC	3 cut(s)	475, 579, 927
AoxI	GGCC	6 cut(s)	74, 78, 185, 774, 875, 882
ApeKI	GCWGC	5 cut(s)	46, 190, 307, 428, 568
AsiGI	ACCGGT	1 cut(s)	1104
Asp700I	GAANNNNTTC	1 cut(s)	816
AspA2I	CCTAGG	1 cut(s)	641
AspLEI	GCGC	3 cut(s)	215, 265, 433
AspS9I	GGNCC	6 cut(s)	314, 646, 710, 875, 1028, 1037
AvaII	GGWCC	5 cut(s)	314, 646, 710, 1028, 1037
AvrII	CCTAGG	1 cut(s)	641
AxyI	CCTNAGG	1 cut(s)	132
BalI	TGGCCA	2 cut(s)	776, 884
BanI	GGYRCC	2 cut(s)	237, 262
BanII	GRGCYC	3 cut(s)	124, 273, 704
BauI	CACGAG	1 cut(s)	1046
Bbv12I	GWGCWC	1 cut(s)	273
BbvI	GCAGC	5 cut(s)	58, 177, 319, 415, 580
BccI	CCATC	6 cut(s)	302, 557, 691, 754, 829, 890
BceAI	ACGGC	1 cut(s)	85
BciT130I	CCWGG	5 cut(s)	23, 312, 706, 765, 1127
BciVI	GTATCC	1 cut(s)	1119
BcoDI	GTCTC	3 cut(s)	475, 579, 927
BfaI	CTAG	2 cut(s)	612, 642
BfmI	CTRYAG	1 cut(s)	1173
BfoI	RGCGCY	1 cut(s)	266
BfuAI	ACCTGC	2 cut(s)	49, 461
BfuI	GTATCC	1 cut(s)	1119
BglI	GCCNNNNNGGC	1 cut(s)	86
BisI	GCNGC	7 cut(s)	47, 188, 191, 308, 429, 569, 604
BlnI	CCTAGG	1 cut(s)	641
BlsI	GCNGC	7 cut(s)	48, 189, 192, 309, 430, 570, 605
Bme1390I	CCNGG	5 cut(s)	23, 312, 706, 765, 1127
Bme18I	GGWCC	5 cut(s)	314, 646, 710, 1028, 1037
BmgT120I	GGNCC	6 cut(s)	314, 646, 710, 875, 1028, 1037
BmiI	GGNNCC	9 cut(s)	99, 239, 264, 353, 647, 648, 703, 711, 1030
BmrFI	CCNGG	5 cut(s)	23, 312, 706, 765, 1127
BmsI	GCATC	2 cut(s)	117, 326
BpmI	CTGGAG	3 cut(s)	688, 786, 1002
BsaBI	GATNNNNATC	1 cut(s)	844
BsaHI	GRCGYC	1 cut(s)	263
BsaJI	CCNNGG	9 cut(s)	174, 246, 317, 641, 705, 713, 732, 926, 1095
BsaWI	WCCGGW	1 cut(s)	1104
Bsc4I	CCNNNNNNNGG	2 cut(s)	247, 1025
Bse118I	RCCGGY	4 cut(s)	76, 80, 215, 1104
Bse1I	ACTGG	2 cut(s)	665, 679
Bse21I	CCTNAGG	1 cut(s)	132
Bse8I	GATNNNNATC	1 cut(s)	844
BseBI	CCWGG	5 cut(s)	23, 312, 706, 765, 1127
BseDI	CCNNGG	9 cut(s)	174, 246, 317, 641, 705, 713, 732, 926, 1095
BseGI	GGATG	4 cut(s)	328, 746, 821, 1056
BseJI	GATNNNNATC	1 cut(s)	844
BseLI	CCNNNNNNNGG	2 cut(s)	247, 1025
BseMII	CTCAG	5 cut(s)	137, 146, 157, 515, 1159
BseNI	ACTGG	2 cut(s)	665, 679
BseRI	GAGGAG	2 cut(s)	783, 915
BseX3I	CGGCCG	1 cut(s)	78
BseXI	GCAGC	5 cut(s)	58, 177, 319, 415, 580
BseYI	CCCAGC	1 cut(s)	117
BsgI	GTGCAG	2 cut(s)	77, 439
Bsh1236I	CGCG	3 cut(s)	40, 433, 855
Bsh1285I	CGRYCG	3 cut(s)	44, 81, 842
BshFI	GGCC	6 cut(s)	76, 80, 187, 776, 877, 884
BshNI	GGYRCC	2 cut(s)	237, 262
BshTI	ACCGGT	1 cut(s)	1104
BsiEI	CGRYCG	3 cut(s)	44, 81, 842
BsiHKAI	GWGCWC	1 cut(s)	273
BsiSI	CCGG	5 cut(s)	77, 81, 216, 226, 1105
BslFI	GGGAC	1 cut(s)	632
BslI	CCNNNNNNNGG	2 cut(s)	247, 1025
BsmAI	GTCTC	3 cut(s)	475, 579, 927
BsmBI	CGTCTC	1 cut(s)	475
BsmFI	GGGAC	1 cut(s)	632
BsmI	GAATGC	2 cut(s)	726, 1121
BsnI	GGCC	6 cut(s)	76, 80, 187, 776, 877, 884
Bsp1286I	GDGCHC	3 cut(s)	124, 273, 704
Bsp143I	GATC	4 cut(s)	252, 527, 839, 1053
Bsp19I	CCATGG	2 cut(s)	732, 1095
BspACI	CCGC	9 cut(s)	40, 49, 68, 89, 188, 193, 604, 853, 1032
BspANI	GGCC	6 cut(s)	76, 80, 187, 776, 877, 884
BspCNI	CTCAG	5 cut(s)	136, 145, 156, 516, 1158
BspFNI	CGCG	3 cut(s)	40, 433, 855
BspLI	GGNNCC	9 cut(s)	99, 239, 264, 353, 647, 648, 703, 711, 1030
BspMI	ACCTGC	2 cut(s)	49, 461
BspQI	GCTCTTC	1 cut(s)	191
BspT107I	GGYRCC	2 cut(s)	237, 262
BsrBI	CCGCTC	1 cut(s)	606
BsrFI	RCCGGY	4 cut(s)	76, 80, 215, 1104
BsrI	ACTGG	2 cut(s)	665, 679
BssAI	RCCGGY	4 cut(s)	76, 80, 215, 1104
BssECI	CCNNGG	9 cut(s)	174, 246, 317, 641, 705, 713, 732, 926, 1095
BssMI	GATC	4 cut(s)	252, 527, 839, 1053
BssNI	GRCGYC	1 cut(s)	263
BssSI	CACGAG	1 cut(s)	1046
BssT1I	CCWWGG	5 cut(s)	246, 641, 713, 732, 1095
Bst2BI	CACGAG	1 cut(s)	1046
Bst2UI	CCWGG	5 cut(s)	23, 312, 706, 765, 1127
Bst4CI	ACNGT	2 cut(s)	356, 982
Bst6I	CTCTTC	2 cut(s)	191, 757
BstACI	GRCGYC	1 cut(s)	263
BstC8I	GCNNGC	4 cut(s)	78, 82, 211, 655
BstDEI	CTNAG	6 cut(s)	123, 132, 143, 495, 524, 1145
BstDSI	CCRYGG	2 cut(s)	732, 1095
BstENI	CCTNNNNNAGG	1 cut(s)	245
BstF5I	GGATG	4 cut(s)	328, 746, 821, 1056
BstFNI	CGCG	3 cut(s)	40, 433, 855
BstH2I	RGCGCY	1 cut(s)	266
BstHHI	GCGC	3 cut(s)	215, 265, 433
BstKTI	GATC	4 cut(s)	255, 530, 842, 1056
BstMAI	GTCTC	3 cut(s)	475, 579, 927
BstMBI	GATC	4 cut(s)	252, 527, 839, 1053
BstMCI	CGRYCG	3 cut(s)	44, 81, 842
BstMWI	GCNNNNNNNGC	6 cut(s)	46, 55, 86, 453, 1127, 1149
BstNI	CCWGG	5 cut(s)	23, 312, 706, 765, 1127
BstNSI	RCATGY	1 cut(s)	482
BstSCI	CCNGG	5 cut(s)	21, 310, 704, 763, 1125
BstSFI	CTRYAG	1 cut(s)	1173
BstUI	CGCG	3 cut(s)	40, 433, 855
BstV1I	GCAGC	5 cut(s)	58, 177, 319, 415, 580
BstZI	CGGCCG	1 cut(s)	78
Bsu36I	CCTNAGG	1 cut(s)	132
BsuI	GTATCC	1 cut(s)	1119
BsuRI	GGCC	6 cut(s)	76, 80, 187, 776, 877, 884
BtgI	CCRYGG	2 cut(s)	732, 1095
BtsCI	GGATG	4 cut(s)	328, 746, 821, 1056
BtsI	GCAGTG	1 cut(s)	731
BtsIMutI	CAGTG	5 cut(s)	456, 672, 731, 953, 996
BveI	ACCTGC	2 cut(s)	49, 461
Cac8I	GCNNGC	4 cut(s)	78, 82, 211, 655
CfoI	GCGC	3 cut(s)	215, 265, 433
Cfr10I	RCCGGY	4 cut(s)	76, 80, 215, 1104
Cfr13I	GGNCC	6 cut(s)	314, 646, 710, 875, 1028, 1037
CseI	GACGC	1 cut(s)	188
Csp6I	GTAC	1 cut(s)	729
CspAI	ACCGGT	1 cut(s)	1104
CspCI	CAANNNNNGTGG	4 cut(s)	598, 633, 837, 872
CviAII	CATG	6 cut(s)	395, 479, 733, 935, 968, 1096
CviQI	GTAC	1 cut(s)	729
DdeI	CTNAG	6 cut(s)	123, 132, 143, 495, 524, 1145
DinI	GGCGCC	1 cut(s)	264
DpnI	GATC	4 cut(s)	254, 529, 841, 1055
DpnII	GATC	4 cut(s)	252, 527, 839, 1053
DraI	TTTAAA	1 cut(s)	442
EaeI	YGGCCR	4 cut(s)	78, 185, 774, 882
EagI	CGGCCG	1 cut(s)	78
Eam1104I	CTCTTC	2 cut(s)	191, 757
EarI	CTCTTC	2 cut(s)	191, 757
Ecl136II	GAGCTC	1 cut(s)	271
EclXI	CGGCCG	1 cut(s)	78
Eco130I	CCWWGG	5 cut(s)	246, 641, 713, 732, 1095
Eco24I	GRGCYC	3 cut(s)	124, 273, 704
Eco47I	GGWCC	5 cut(s)	314, 646, 710, 1028, 1037
Eco52I	CGGCCG	1 cut(s)	78
Eco53kI	GAGCTC	1 cut(s)	271
Eco57I	CTGAAG	3 cut(s)	738, 929, 972
Eco81I	CCTNAGG	1 cut(s)	132
EcoICRI	GAGCTC	1 cut(s)	271
EcoNI	CCTNNNNNAGG	1 cut(s)	245
EcoO109I	RGGNCCY	2 cut(s)	646, 875
EcoRII	CCWGG	5 cut(s)	21, 310, 704, 763, 1125
EcoT14I	CCWWGG	5 cut(s)	246, 641, 713, 732, 1095
EcoT38I	GRGCYC	3 cut(s)	124, 273, 704
EgeI	GGCGCC	1 cut(s)	264
EheI	GGCGCC	1 cut(s)	264
ErhI	CCWWGG	5 cut(s)	246, 641, 713, 732, 1095
Esp3I	CGTCTC	1 cut(s)	475
FaeI	CATG	6 cut(s)	398, 482, 736, 938, 971, 1099
FalI	AAGNNNNNCTT	2 cut(s)	272, 304
FaqI	GGGAC	1 cut(s)	632
FatI	CATG	6 cut(s)	394, 478, 732, 934, 967, 1095
FauI	CCCGC	3 cut(s)	42, 61, 1039
Fnu4HI	GCNGC	7 cut(s)	47, 188, 191, 308, 429, 569, 604
FokI	GGATG	4 cut(s)	335, 733, 808, 1043
FriOI	GRGCYC	3 cut(s)	124, 273, 704
FseI	GGCCGGCC	1 cut(s)	80
Fsp4HI	GCNGC	7 cut(s)	47, 188, 191, 308, 429, 569, 604
FspBI	CTAG	2 cut(s)	612, 642
GlaI	GCGC	3 cut(s)	214, 264, 432
GluI	GCNGC	7 cut(s)	47, 188, 191, 308, 429, 569, 604
GsaI	CCCAGC	1 cut(s)	121
GsuI	CTGGAG	3 cut(s)	688, 786, 1002
HaeII	RGCGCY	1 cut(s)	266
HaeIII	GGCC	6 cut(s)	76, 80, 187, 776, 877, 884
HapII	CCGG	5 cut(s)	77, 81, 216, 226, 1105
HgaI	GACGC	1 cut(s)	188
HhaI	GCGC	3 cut(s)	215, 265, 433
Hin1I	GRCGYC	1 cut(s)	263
Hin1II	CATG	6 cut(s)	398, 482, 736, 938, 971, 1099
Hin6I	GCGC	3 cut(s)	213, 263, 431
HinP1I	GCGC	3 cut(s)	213, 263, 431
HinfI	GANTC	5 cut(s)	106, 162, 574, 737, 742
HpaII	CCGG	5 cut(s)	77, 81, 216, 226, 1105
Hpy166II	GTNNAC	2 cut(s)	552, 729
Hpy188I	TCNGA	6 cut(s)	126, 146, 175, 318, 335, 839
Hpy188III	TCNNGA	3 cut(s)	134, 517, 1019
Hpy8I	GTNNAC	2 cut(s)	552, 729
HpyAV	CCTTC	2 cut(s)	298, 404
HpyCH4III	ACNGT	2 cut(s)	356, 982
HpyCH4V	TGCA	5 cut(s)	58, 456, 596, 724, 809
HpyF10VI	GCNNNNNNNGC	6 cut(s)	46, 55, 86, 453, 1127, 1149
HpyF3I	CTNAG	6 cut(s)	123, 132, 143, 495, 524, 1145
Hsp92I	GRCGYC	1 cut(s)	263
Hsp92II	CATG	6 cut(s)	398, 482, 736, 938, 971, 1099
HspAI	GCGC	3 cut(s)	213, 263, 431
KasI	GGCGCC	1 cut(s)	262
KflI	GGGWCCC	1 cut(s)	646
KroI	GCCGGC	2 cut(s)	76, 80
KroNI	GCCGGC	2 cut(s)	78, 82
Kzo9I	GATC	4 cut(s)	252, 527, 839, 1053
LguI	GCTCTTC	1 cut(s)	191
LmnI	GCTCC	4 cut(s)	97, 501, 611, 707
Lsp1109I	GCAGC	5 cut(s)	58, 177, 319, 415, 580
LweI	GCATC	2 cut(s)	117, 326
MaeI	CTAG	2 cut(s)	612, 642
MaeIII	GTNAC	2 cut(s)	506, 976
MalI	GATC	4 cut(s)	254, 529, 841, 1055
MbiI	CCGCTC	1 cut(s)	606
MboI	GATC	4 cut(s)	252, 527, 839, 1053
MboII	GAAGA	3 cut(s)	208, 744, 1063
MhlI	GDGCHC	3 cut(s)	124, 273, 704
MlsI	TGGCCA	2 cut(s)	776, 884
MluCI	AATT	3 cut(s)	622, 812, 1064
MluNI	TGGCCA	2 cut(s)	776, 884
Mly113I	GGCGCC	1 cut(s)	263
MlyI	GAGTC	1 cut(s)	583
MmeI	TCCRAC	1 cut(s)	212
Mox20I	TGGCCA	2 cut(s)	776, 884
MroNI	GCCGGC	2 cut(s)	76, 80
MroXI	GAANNNNTTC	1 cut(s)	816
MscI	TGGCCA	2 cut(s)	776, 884
MseI	TTAA	3 cut(s)	17, 441, 911
MslI	CAYNNNNRTG	1 cut(s)	804
Msp20I	TGGCCA	2 cut(s)	776, 884
MspA1I	CMGCKG	2 cut(s)	49, 190
MspI	CCGG	5 cut(s)	77, 81, 216, 226, 1105
MspR9I	CCNGG	5 cut(s)	23, 312, 706, 765, 1127
MssI	GTTTAAAC	1 cut(s)	442
Mva1269I	GAATGC	2 cut(s)	726, 1121
MvaI	CCWGG	5 cut(s)	23, 312, 706, 765, 1127
MvnI	CGCG	3 cut(s)	40, 433, 855
MwoI	GCNNNNNNNGC	6 cut(s)	46, 55, 86, 453, 1127, 1149
NaeI	GCCGGC	2 cut(s)	78, 82
NarI	GGCGCC	1 cut(s)	263
NcoI	CCATGG	2 cut(s)	732, 1095
NdeII	GATC	4 cut(s)	252, 527, 839, 1053
NgoMIV	GCCGGC	2 cut(s)	76, 80
NlaIII	CATG	6 cut(s)	398, 482, 736, 938, 971, 1099
NlaIV	GGNNCC	9 cut(s)	99, 239, 264, 353, 647, 648, 703, 711, 1030
NmeAIII	GCCGAG	1 cut(s)	597
NspI	RCATGY	1 cut(s)	482
PaqCI	CACCTGC	1 cut(s)	461
PciI	ACATGT	1 cut(s)	478
PciSI	GCTCTTC	1 cut(s)	191
PcsI	WCGNNNNNNNCGW	1 cut(s)	171
PctI	GAATGC	2 cut(s)	726, 1121
PdiI	GCCGGC	2 cut(s)	78, 82
PdmI	GAANNNNTTC	1 cut(s)	816
PfeI	GAWTC	4 cut(s)	106, 162, 737, 742
PflFI	GACNNNGTC	1 cut(s)	329
PflMI	CCANNNNNTGG	1 cut(s)	1025
PfoI	TCCNGGA	1 cut(s)	21
PinAI	ACCGGT	1 cut(s)	1104
PkrI	GCNGC	7 cut(s)	48, 189, 192, 309, 430, 570, 605
Ple19I	CGATCG	1 cut(s)	842
PleI	GAGTC	1 cut(s)	582
PluTI	GGCGCC	1 cut(s)	266
PmeI	GTTTAAAC	1 cut(s)	442
PpsI	GAGTC	1 cut(s)	582
PpuMI	RGGWCCY	1 cut(s)	646
PscI	ACATGT	1 cut(s)	478
Psp124BI	GAGCTC	1 cut(s)	273
Psp5II	RGGWCCY	1 cut(s)	646
Psp6I	CCWGG	5 cut(s)	21, 310, 704, 763, 1125
PspFI	CCCAGC	1 cut(s)	117
PspGI	CCWGG	5 cut(s)	21, 310, 704, 763, 1125
PspN4I	GGNNCC	9 cut(s)	99, 239, 264, 353, 647, 648, 703, 711, 1030
PspPI	GGNCC	6 cut(s)	314, 646, 710, 875, 1028, 1037
PspPPI	RGGWCCY	1 cut(s)	646
PsyI	GACNNNGTC	1 cut(s)	329
PvuI	CGATCG	1 cut(s)	842
RigI	GGCCGGCC	1 cut(s)	80
RsaI	GTAC	1 cut(s)	730
RsaNI	GTAC	1 cut(s)	729
RseI	CAYNNNNRTG	1 cut(s)	804
SacI	GAGCTC	1 cut(s)	273
SapI	GCTCTTC	1 cut(s)	191
SaqAI	TTAA	3 cut(s)	17, 441, 911
SatI	GCNGC	7 cut(s)	47, 188, 191, 308, 429, 569, 604
Sau3AI	GATC	4 cut(s)	252, 527, 839, 1053
Sau96I	GGNCC	6 cut(s)	314, 646, 710, 875, 1028, 1037
SchI	GAGTC	1 cut(s)	583
ScrFI	CCNGG	5 cut(s)	23, 312, 706, 765, 1127
SduI	GDGCHC	3 cut(s)	124, 273, 704
SfaNI	GCATC	2 cut(s)	117, 326
SfcI	CTRYAG	1 cut(s)	1173
SfoI	GGCGCC	1 cut(s)	264
SgrAI	CRCCGGYG	1 cut(s)	215
SinI	GGWCC	5 cut(s)	314, 646, 710, 1028, 1037
SmiMI	CAYNNNNRTG	1 cut(s)	804
Sse9I	AATT	3 cut(s)	622, 812, 1064
SsiI	CCGC	9 cut(s)	40, 49, 68, 89, 188, 193, 604, 853, 1032
SspDI	GGCGCC	1 cut(s)	262
SspMI	CTAG	2 cut(s)	612, 642
SstI	GAGCTC	1 cut(s)	273
StyD4I	CCNGG	5 cut(s)	21, 310, 704, 763, 1125
StyI	CCWWGG	5 cut(s)	246, 641, 713, 732, 1095
TaaI	ACNGT	2 cut(s)	356, 982
TaqI	TCGA	4 cut(s)	5, 165, 740, 842
TasI	AATT	3 cut(s)	622, 812, 1064
TauI	GCSGC	2 cut(s)	190, 606
TfiI	GAWTC	4 cut(s)	106, 162, 737, 742
Tru1I	TTAA	3 cut(s)	17, 441, 911
Tru9I	TTAA	3 cut(s)	17, 441, 911
TscAI	CASTG	5 cut(s)	463, 672, 731, 953, 996
TseI	GCWGC	5 cut(s)	46, 190, 307, 428, 568
TspDTI	ATGAA	2 cut(s)	699, 956
TspGWI	ACGGA	2 cut(s)	289, 364
TspRI	CASTG	5 cut(s)	463, 672, 731, 953, 996
Tth111I	GACNNNGTC	1 cut(s)	329
Van91I	CCANNNNNTGG	1 cut(s)	1025
VpaK11BI	GGWCC	5 cut(s)	314, 646, 710, 1028, 1037
XagI	CCTNNNNNAGG	1 cut(s)	245
XceI	RCATGY	1 cut(s)	482
XmaJI	CCTAGG	1 cut(s)	641
XmnI	GAANNNNTTC	1 cut(s)	816
XspI	CTAG	2 cut(s)	612, 642

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.