Rorug05G0368900

Tubby-like F-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0001645
Physical Location & Seq
Reverse (-)
49389667 .. 49392828
3162 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0368900.1

Sequence Viewer

Length: 2109 bp
ATGGAGCAAAACCCTCTTCAATCCGACGGCGGCCCAGATGGCCTTCCCGTCAGGTCCACGACCCTCATAACCTTCTCCCGCCGAGGCCGAAACCGGAATCCTAAAGCTGCTCAGCAGAGACTTGAAATCCTCAGAAAAACCCTAAACCCAATTCCCTTTGTGCCCGCCGAAAACCCGAACTTGCAGCGCCATGAGGAGCTCCTGAAGCGGCTGGGCCTCTGGGACTTTCTCCACATCCAGTTTGATCCGACTGTTCGGGCTGATCTTATTGCTGAGTTGATTGTTAACTATAACCCTCAGCGGCGGTGCAGCTACGTCGGTGAGGTCCGGATTAGGGTCAGCCCTGCCGATTTGGGACGCGCATTGAAGCTTCCGGTTGGGGTGAAATCGAAGAAGAATGTGGTTGCAGGTGAGGTGGAGGAGGCTCCGGCTCCGGCGGCGTCGGAGGAATCGATAGCTTTGGTTGAGGATTTGGTAGGCAATTATTGGGTGCTTTTGCAGGAGGATGAGCCCAGGGAGGTTTTGAAGTGGTGTAAGGATATCAAAGAAGGGCTGTTTGGGAATGTGGATTGGGCTGGTTTGATTTGGTTCATGGTGGAAAAGGAGTTGCTTAAGGGGGGTCTACAGTTGGGGGATTGTTACTATGCATCGCATTTGCAGTTATTGATAAAATCTCAGTGCGAGAGTTTGTTTTCGGAGAAGGGACAAGGGTCTAGGGTGGAGATTGAGTTGAAGGAGGACGGGGAAGAGGATGGTATAATGGGTGGGGAGGATGATTTTCAGGGAGGCAGATTGGAGGAGCACGGTATTAAACTATGTCTTGGGGAAGAAAATGTGGAGAAATGTTATATTGAGAAAGTCGATGTGGAGGAAGTTGATGTTGAGCAGGAAAATGTGGAGGAACTTGATGTTGACCAAGAAAATGTGGAGAAAGTTATAGGTGAAAGGGTGCTAGATGAGGTTGAGGATGAGGATGAGGATGTAATGGATGTCGAAGAATTTAAGGAGGAAGAGCCTACCCAATGGCTTTTGTCTGGGAAGGGCAATTTAAAAGGACCTTGTTTGCAGCGGTGCAATCTTCACGGGGTTGAGGATTTGGGTTGTGGGGATGAGAGAAAAAATTATATGGAGTTGGGAGAAGAAGAAGATGAAGAAGAGGAAGAGGATGATCAGGAGGGAGGCTTCGACCTTTCAATGAAGGGTTTTTCTTTGGAGGGGTTGTCTTCAGGAAGTCTTATGCAGGTCATGGAAGGGGGCCATATCCCTCTTGGCTCTGGTATGCCACTGCATGATCATTTGGCCACAGATTTTCCTTCGTCAAGGTGGGACCTAATGCTTCCTGGAAGTTCTTCACTTTCTGGTAATGGTCACAAGAGAGAGTTTAGCCATGAAAATGATAATTCTGATCATGGTCTCGATGGTAATAAGAGGTTGAGGACTGATGGCCCTTGGCATAGTAAGATGCCGGGTGACTTTGACGTGTGTATGGAGCATATACAGCAGTGGATGGGGAAAATGGAGGATATGCAGCAGTGGATGGGAAAAGCTAGGATAATGTATGTGGCAAAAGAACAGGAGTGTGAAGACGCTAAAATGAAGCAGCAGCTTTTACTGGTAGAGTTGCAGAAAAGGGACGAGTTCATCGAGCACTTGCACAAGGCCAGGACCGAAGACCAGCAGAAGAGACAAACTGAGAAGTATAGGTTTGAGCATGAGGTTTATTTGATGCAAAATCTCTTGAATGGCTATAGGAAGGCTTTAAAGGCAACACAAAAGGCATTTGCTGAATATAAAGCACGCAATCCACAGGCTGATGAGCCACTCTATAGAGATGTTCCTGGTTCTGGGGGTCTTGTTTTAAGCACTCGAGAACTTGAAAAGCTTCGCTTAAAGCAAGAAGAAGAAGAGAGGATGAGGCGTCTGGTGATTGAAACAAAAATTAAGGACTTTGAAGCTGGGTGGATTAGCAAATTTGAAGCACACCACAAGAGTGTTGAAGTAGTGAGTAATAGGTTGTTGGGTGTGGAGAAGGAAGTGAAACTTCTCAATGAACAGCTTACAAAACAGAGGCTTTCAGAGACACCAGAACATACTCCAAATGAATCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005488 GO:0005543 GO:0008289 GO:0035091 GO:0043167 GO:0043168
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box Tub

Protein Analysis

702

Amino Acids

80.26

Weight (kDa)

4.81

Isoelectric Point (pI)

54.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 398
Acc36I ACCTGC 2 cut(s) 398, 1231
AccI GTMKAC 1 cut(s) 622
AccII CGCG 1 cut(s) 360
AccIII TCCGGA 1 cut(s) 327
AciI CCGC 8 cut(s) 30, 79, 165, 208, 301, 304, 437, 1069
AclWI GGATC 1 cut(s) 239
AcoI YGGCCR 1 cut(s) 1299
AcsI RAATTY 2 cut(s) 998, 1970
AcuI CTGAAG 2 cut(s) 224, 1209
AcyI GRCGYC 2 cut(s) 440, 1918
AfiI CCNNNNNNNGG 2 cut(s) 334, 1844
AflII CTTAAG 1 cut(s) 611
AflIII ACRYGT 1 cut(s) 1479
AjiI CACGTC 1 cut(s) 1480
AjnI CCWGG 4 cut(s) 512, 1339, 1661, 1837
AjuI GAANNNNNNNTTGG 2 cut(s) 540, 572
AleI CACNNNNGTG 1 cut(s) 1989
Alw21I GWGCWC 3 cut(s) 201, 804, 1650
Alw26I GTCTC 4 cut(s) 112, 1418, 1678, 2072
AlwI GGATC 1 cut(s) 239
Ama87I CYCGRG 1 cut(s) 1866
Aor13HI TCCGGA 1 cut(s) 327
AoxI GGCC 8 cut(s) 31, 40, 85, 214, 1255, 1299, 1444, 1659
ApeKI GCWGC 7 cut(s) 107, 184, 309, 1066, 1528, 1600, 1603
ApoI RAATTY 2 cut(s) 998, 1970
Asp700I GAANNNNTTC 2 cut(s) 1348, 1881
AspLEI GCGC 2 cut(s) 189, 362
AspS9I GGNCC 9 cut(s) 32, 54, 214, 325, 1055, 1255, 1327, 1445, 1665
AsuC2I CCSGG 1 cut(s) 1467
AsuHPI GGTGA 6 cut(s) 332, 394, 422, 953, 1481, 1936
AvaI CYCGRG 1 cut(s) 1866
AvaII GGWCC 5 cut(s) 54, 325, 1055, 1327, 1665
BaeGI GKGCMC 1 cut(s) 165
BalI TGGCCA 1 cut(s) 1301
BanII GRGCYC 2 cut(s) 201, 513
BbsI GAAGAC 3 cut(s) 1215, 1590, 1677
Bbv12I GWGCWC 3 cut(s) 201, 804, 1650
BbvCI CCTCAGC 1 cut(s) 297
BbvI GCAGC 7 cut(s) 94, 196, 321, 1078, 1540, 1612, 1615
BccI CCATC 6 cut(s) 32, 746, 1412, 1436, 1501, 1531
BceAI ACGGC 1 cut(s) 43
BcgI CGANNNNNNTGC 2 cut(s) 298, 332
BciT130I CCWGG 4 cut(s) 514, 1341, 1663, 1839
BclI TGATCA 3 cut(s) 1168, 1291, 1405
BcnI CCSGG 1 cut(s) 1467
BcoDI GTCTC 4 cut(s) 112, 1418, 1678, 2072
BfaI CTAG 3 cut(s) 714, 953, 1548
BfmI CTRYAG 3 cut(s) 623, 1747, 1825
BfoI RGCGCY 1 cut(s) 190
BfrI CTTAAG 1 cut(s) 611
BfuAI ACCTGC 2 cut(s) 398, 1231
BglI GCCNNNNNGGC 1 cut(s) 39
BlpI GCTNAGC 1 cut(s) 111
Bme1390I CCNGG 5 cut(s) 514, 1341, 1467, 1663, 1839
Bme18I GGWCC 5 cut(s) 54, 325, 1055, 1327, 1665
BmeT110I CYCGRG 1 cut(s) 1866
BmgBI CACGTC 1 cut(s) 1480
BmgT120I GGNCC 9 cut(s) 32, 54, 214, 325, 1055, 1255, 1327, 1445, 1665
BmiI GGNNCC 4 cut(s) 426, 432, 1256, 1328
BmrFI CCNGG 5 cut(s) 514, 1341, 1467, 1663, 1839
BmsI GCATC 3 cut(s) 656, 1452, 1716
BoxI GACNNNNGTC 1 cut(s) 709
BpiI GAAGAC 3 cut(s) 1215, 1590, 1677
Bpu10I CCTNAGC 1 cut(s) 297
Bpu1102I GCTNAGC 1 cut(s) 111
BpuMI CCSGG 1 cut(s) 1467
Bsa29I ATCGAT 1 cut(s) 452
BsaHI GRCGYC 2 cut(s) 440, 1918
BsaI GGTCTC 1 cut(s) 1418
BsaJI CCNNGG 4 cut(s) 82, 512, 513, 1448
BsaWI WCCGGW 3 cut(s) 93, 327, 373
BsaXI ACNNNNNCTCC 4 cut(s) 713, 743, 1205, 1235
Bsc4I CCNNNNNNNGG 2 cut(s) 334, 1844
Bse1I ACTGG 2 cut(s) 238, 1617
BseAI TCCGGA 1 cut(s) 327
BseBI CCWGG 4 cut(s) 514, 1341, 1663, 1839
BseCI ATCGAT 1 cut(s) 452
BseDI CCNNGG 4 cut(s) 82, 512, 513, 1448
BseLI CCNNNNNNNGG 2 cut(s) 334, 1844
BseMII CTCAG 6 cut(s) 125, 145, 264, 311, 689, 1683
BseNI ACTGG 2 cut(s) 238, 1617
BseRI GAGGAG 3 cut(s) 209, 434, 812
BseSI GKGCMC 1 cut(s) 165
BseXI GCAGC 7 cut(s) 94, 196, 321, 1078, 1540, 1612, 1615
BseYI CCCAGC 2 cut(s) 211, 1955
BsgI GTGCAG 1 cut(s) 328
Bsh1236I CGCG 1 cut(s) 360
BshFI GGCC 8 cut(s) 33, 42, 87, 216, 1257, 1301, 1446, 1661
BshVI ATCGAT 1 cut(s) 452
BsiHKAI GWGCWC 3 cut(s) 201, 804, 1650
BsiHKCI CYCGRG 1 cut(s) 1866
BsiSI CCGG 6 cut(s) 94, 328, 374, 428, 434, 1466
BslFI GGGAC 5 cut(s) 236, 369, 717, 1340, 1646
BslI CCNNNNNNNGG 2 cut(s) 334, 1844
BsmAI GTCTC 4 cut(s) 112, 1418, 1678, 2072
BsmFI GGGAC 5 cut(s) 236, 369, 717, 1340, 1646
BsnI GGCC 8 cut(s) 33, 42, 87, 216, 1257, 1301, 1446, 1661
Bso31I GGTCTC 1 cut(s) 1418
BsoBI CYCGRG 1 cut(s) 1866
Bsp1286I GDGCHC 5 cut(s) 165, 201, 513, 804, 1650
Bsp13I TCCGGA 1 cut(s) 327
Bsp143I GATC 5 cut(s) 244, 262, 1168, 1291, 1405
Bsp1720I GCTNAGC 1 cut(s) 111
BspACI CCGC 8 cut(s) 30, 79, 165, 208, 301, 304, 437, 1069
BspANI GGCC 8 cut(s) 33, 42, 87, 216, 1257, 1301, 1446, 1661
BspCNI CTCAG 6 cut(s) 124, 144, 265, 310, 688, 1684
BspDI ATCGAT 1 cut(s) 452
BspEI TCCGGA 1 cut(s) 327
BspFNI CGCG 1 cut(s) 360
BspHI TCATGA 1 cut(s) 2105
BspLI GGNNCC 4 cut(s) 426, 432, 1256, 1328
BspMI ACCTGC 2 cut(s) 398, 1231
BspPI GGATC 1 cut(s) 239
BspQI GCTCTTC 1 cut(s) 1005
BspTI CTTAAG 1 cut(s) 611
BspTNI GGTCTC 1 cut(s) 1418
BsrI ACTGG 2 cut(s) 238, 1617
BssECI CCNNGG 4 cut(s) 82, 512, 513, 1448
BssMI GATC 5 cut(s) 244, 262, 1168, 1291, 1405
BssNI GRCGYC 2 cut(s) 440, 1918
BssT1I CCWWGG 1 cut(s) 1448
Bst2UI CCWGG 4 cut(s) 514, 1341, 1663, 1839
Bst4CI ACNGT 3 cut(s) 253, 627, 806
Bst6I CTCTTC 7 cut(s) 21, 741, 1005, 1149, 1155, 1676, 1899
BstACI GRCGYC 2 cut(s) 440, 1918
BstAFI CTTAAG 1 cut(s) 611
BstC8I GCNNGC 2 cut(s) 165, 1798
BstDEI CTNAG 6 cut(s) 111, 131, 273, 297, 675, 1692
BstFNI CGCG 1 cut(s) 360
BstH2I RGCGCY 1 cut(s) 190
BstHHI GCGC 2 cut(s) 189, 362
BstKTI GATC 5 cut(s) 247, 265, 1171, 1294, 1408
BstMAI GTCTC 4 cut(s) 112, 1418, 1678, 2072
BstMBI GATC 5 cut(s) 244, 262, 1168, 1291, 1405
BstMWI GCNNNNNNNGC 5 cut(s) 39, 205, 437, 1498, 1763
BstNI CCWGG 4 cut(s) 514, 1341, 1663, 1839
BstPAI GACNNNNGTC 1 cut(s) 709
BstSCI CCNGG 5 cut(s) 512, 1339, 1465, 1661, 1837
BstSFI CTRYAG 3 cut(s) 623, 1747, 1825
BstSLI GKGCMC 1 cut(s) 165
BstUI CGCG 1 cut(s) 360
BstV1I GCAGC 7 cut(s) 94, 196, 321, 1078, 1540, 1612, 1615
BstV2I GAAGAC 3 cut(s) 1215, 1590, 1677
Bsu15I ATCGAT 1 cut(s) 452
BsuRI GGCC 8 cut(s) 33, 42, 87, 216, 1257, 1301, 1446, 1661
BsuTUI ATCGAT 1 cut(s) 452
BtgZI GCGATG 1 cut(s) 633
BtrI CACGTC 1 cut(s) 1480
BtsI GCAGTG 3 cut(s) 1283, 1508, 1538
BtsIMutI CAGTG 4 cut(s) 683, 1283, 1508, 1538
BveI ACCTGC 2 cut(s) 398, 1231
Cac8I GCNNGC 2 cut(s) 165, 1798
CciI TCATGA 1 cut(s) 2105
CfoI GCGC 2 cut(s) 189, 362
Cfr13I GGNCC 9 cut(s) 32, 54, 214, 325, 1055, 1255, 1327, 1445, 1665
ClaI ATCGAT 1 cut(s) 452
CseI GACGC 4 cut(s) 366, 429, 1595, 1907
CviAII CATG 8 cut(s) 191, 592, 1246, 1289, 1388, 1409, 1712, 2106
DdeI CTNAG 6 cut(s) 111, 131, 273, 297, 675, 1692
DpnI GATC 5 cut(s) 246, 264, 1170, 1293, 1407
DpnII GATC 5 cut(s) 244, 262, 1168, 1291, 1405
DraI TTTAAA 2 cut(s) 1050, 1761
EaeI YGGCCR 1 cut(s) 1299
Eam1104I CTCTTC 7 cut(s) 21, 741, 1005, 1149, 1155, 1676, 1899
EarI CTCTTC 7 cut(s) 21, 741, 1005, 1149, 1155, 1676, 1899
Ecl136II GAGCTC 1 cut(s) 199
Eco130I CCWWGG 1 cut(s) 1448
Eco24I GRGCYC 2 cut(s) 201, 513
Eco31I GGTCTC 1 cut(s) 1418
Eco32I GATATC 1 cut(s) 541
Eco47I GGWCC 5 cut(s) 54, 325, 1055, 1327, 1665
Eco53kI GAGCTC 1 cut(s) 199
Eco57I CTGAAG 2 cut(s) 224, 1209
Eco88I CYCGRG 1 cut(s) 1866
EcoICRI GAGCTC 1 cut(s) 199
EcoO109I RGGNCCY 2 cut(s) 1055, 1327
EcoRII CCWGG 4 cut(s) 512, 1339, 1661, 1837
EcoRV GATATC 1 cut(s) 541
EcoT14I CCWWGG 1 cut(s) 1448
EcoT22I ATGCAT 1 cut(s) 649
EcoT38I GRGCYC 2 cut(s) 201, 513
ErhI CCWWGG 1 cut(s) 1448
FaeI CATG 8 cut(s) 194, 595, 1249, 1292, 1391, 1412, 1715, 2109
FalI AAGNNNNNCTT 4 cut(s) 1871, 1903, 2025, 2057
FaqI GGGAC 5 cut(s) 236, 369, 717, 1340, 1646
FatI CATG 8 cut(s) 190, 591, 1245, 1288, 1387, 1408, 1711, 2105
FauI CCCGC 2 cut(s) 86, 172
FbaI TGATCA 3 cut(s) 1168, 1291, 1405
FblI GTMKAC 1 cut(s) 622
FriOI GRGCYC 2 cut(s) 201, 513
FspBI CTAG 3 cut(s) 714, 953, 1548
GlaI GCGC 2 cut(s) 188, 361
GsaI CCCAGC 2 cut(s) 215, 1959
HaeII RGCGCY 1 cut(s) 190
HaeIII GGCC 8 cut(s) 33, 42, 87, 216, 1257, 1301, 1446, 1661
HapII CCGG 6 cut(s) 94, 328, 374, 428, 434, 1466
HgaI GACGC 4 cut(s) 366, 429, 1595, 1907
HhaI GCGC 2 cut(s) 189, 362
Hin1I GRCGYC 2 cut(s) 440, 1918
Hin1II CATG 8 cut(s) 194, 595, 1249, 1292, 1391, 1412, 1715, 2109
Hin6I GCGC 2 cut(s) 187, 360
HinP1I GCGC 2 cut(s) 187, 360
HincII GTYRAC 2 cut(s) 286, 913
HindII GTYRAC 2 cut(s) 286, 913
HindIII AAGCTT 2 cut(s) 368, 1880
HinfI GANTC 3 cut(s) 97, 449, 2102
HpaI GTTAAC 1 cut(s) 286
HpaII CCGG 6 cut(s) 94, 328, 374, 428, 434, 1466
HphI GGTGA 6 cut(s) 332, 394, 422, 953, 1481, 1936
Hpy166II GTNNAC 4 cut(s) 57, 286, 623, 913
Hpy188I TCNGA 7 cut(s) 25, 134, 249, 445, 697, 1405, 2077
Hpy188III TCNNGA 8 cut(s) 202, 328, 1172, 1227, 1415, 1738, 1868, 2106
Hpy8I GTNNAC 4 cut(s) 57, 286, 623, 913
Hpy99I CGWCG 3 cut(s) 29, 320, 445
HpyCH4III ACNGT 3 cut(s) 253, 627, 806
HpyCH4IV ACGT 2 cut(s) 315, 1479
HpyF10VI GCNNNNNNNGC 5 cut(s) 39, 205, 437, 1498, 1763
HpyF3I CTNAG 6 cut(s) 111, 131, 273, 297, 675, 1692
HpySE526I ACGT 2 cut(s) 315, 1479
Hsp92I GRCGYC 2 cut(s) 440, 1918
Hsp92II CATG 8 cut(s) 194, 595, 1249, 1292, 1391, 1412, 1715, 2109
HspAI GCGC 2 cut(s) 187, 360
Kpn2I TCCGGA 1 cut(s) 327
Ksp22I TGATCA 3 cut(s) 1168, 1291, 1405
KspAI GTTAAC 1 cut(s) 286
Kzo9I GATC 5 cut(s) 244, 262, 1168, 1291, 1405
LguI GCTCTTC 1 cut(s) 1005
LmnI GCTCC 7 cut(s) 4, 196, 204, 430, 436, 799, 1489
Lsp1109I GCAGC 7 cut(s) 94, 196, 321, 1078, 1540, 1612, 1615
LweI GCATC 3 cut(s) 656, 1452, 1716
MaeI CTAG 3 cut(s) 714, 953, 1548
MaeII ACGT 2 cut(s) 315, 1479
MaeIII GTNAC 3 cut(s) 638, 1367, 1469
MalI GATC 5 cut(s) 246, 264, 1170, 1293, 1407
MboI GATC 5 cut(s) 244, 262, 1168, 1291, 1405
MhlI GDGCHC 5 cut(s) 165, 201, 513, 804, 1650
MlsI TGGCCA 1 cut(s) 1301
MluCI AATT 8 cut(s) 150, 481, 998, 1045, 1120, 1399, 1938, 1970
MluNI TGGCCA 1 cut(s) 1301
MmeI TCCRAC 3 cut(s) 48, 272, 423
Mox20I TGGCCA 1 cut(s) 1301
Mph1103I ATGCAT 1 cut(s) 649
MroI TCCGGA 1 cut(s) 327
MroXI GAANNNNTTC 2 cut(s) 1348, 1881
MscI TGGCCA 1 cut(s) 1301
MseI TTAA 9 cut(s) 285, 612, 810, 1002, 1049, 1760, 1859, 1889, 1941
MslI CAYNNNNRTG 2 cut(s) 1392, 1989
Msp20I TGGCCA 1 cut(s) 1301
MspA1I CMGCKG 2 cut(s) 301, 1069
MspCI CTTAAG 1 cut(s) 611
MspI CCGG 6 cut(s) 94, 328, 374, 428, 434, 1466
MspR9I CCNGG 5 cut(s) 514, 1341, 1467, 1663, 1839
MvaI CCWGG 4 cut(s) 514, 1341, 1663, 1839
MvnI CGCG 1 cut(s) 360
MwoI GCNNNNNNNGC 5 cut(s) 39, 205, 437, 1498, 1763
NciI CCSGG 1 cut(s) 1467
NdeII GATC 5 cut(s) 244, 262, 1168, 1291, 1405
NlaIII CATG 8 cut(s) 194, 595, 1249, 1292, 1391, 1412, 1715, 2109
NlaIV GGNNCC 4 cut(s) 426, 432, 1256, 1328
NmeAIII GCCGAG 1 cut(s) 107
NmuCI GTSAC 2 cut(s) 1367, 1469
NsiI ATGCAT 1 cut(s) 649
OliI CACNNNNGTG 1 cut(s) 1989
PaeR7I CTCGAG 1 cut(s) 1866
PagI TCATGA 1 cut(s) 2105
PaqCI CACCTGC 1 cut(s) 398
PasI CCCWGGG 1 cut(s) 513
PciSI GCTCTTC 1 cut(s) 1005
PcsI WCGNNNNNNNCGW 2 cut(s) 449, 1641
PdmI GAANNNNTTC 2 cut(s) 1348, 1881
PfeI GAWTC 3 cut(s) 97, 449, 2102
PfoI TCCNGGA 1 cut(s) 1339
PpuMI RGGWCCY 2 cut(s) 1055, 1327
PshAI GACNNNNGTC 1 cut(s) 709
Psp124BI GAGCTC 1 cut(s) 201
Psp5II RGGWCCY 2 cut(s) 1055, 1327
Psp6I CCWGG 4 cut(s) 512, 1339, 1661, 1837
PspFI CCCAGC 2 cut(s) 211, 1955
PspGI CCWGG 4 cut(s) 512, 1339, 1661, 1837
PspN4I GGNNCC 4 cut(s) 426, 432, 1256, 1328
PspPI GGNCC 9 cut(s) 32, 54, 214, 325, 1055, 1255, 1327, 1445, 1665
PspPPI RGGWCCY 2 cut(s) 1055, 1327
RseI CAYNNNNRTG 2 cut(s) 1392, 1989
SacI GAGCTC 1 cut(s) 201
SapI GCTCTTC 1 cut(s) 1005
SaqAI TTAA 9 cut(s) 285, 612, 810, 1002, 1049, 1760, 1859, 1889, 1941
Sau3AI GATC 5 cut(s) 244, 262, 1168, 1291, 1405
Sau96I GGNCC 9 cut(s) 32, 54, 214, 325, 1055, 1255, 1327, 1445, 1665
ScrFI CCNGG 5 cut(s) 514, 1341, 1467, 1663, 1839
SduI GDGCHC 5 cut(s) 165, 201, 513, 804, 1650
SfaNI GCATC 3 cut(s) 656, 1452, 1716
SfcI CTRYAG 3 cut(s) 623, 1747, 1825
SfiI GGCCNNNNNGGCC 1 cut(s) 39
Sfr274I CTCGAG 1 cut(s) 1866
SinI GGWCC 5 cut(s) 54, 325, 1055, 1327, 1665
SlaI CTCGAG 1 cut(s) 1866
SmiMI CAYNNNNRTG 2 cut(s) 1392, 1989
SmlI CTYRAG 2 cut(s) 611, 1866
SmoI CTYRAG 2 cut(s) 611, 1866
Sse9I AATT 8 cut(s) 150, 481, 998, 1045, 1120, 1399, 1938, 1970
SsiI CCGC 8 cut(s) 30, 79, 165, 208, 301, 304, 437, 1069
SspMI CTAG 3 cut(s) 714, 953, 1548
SstI GAGCTC 1 cut(s) 201
StyD4I CCNGG 5 cut(s) 512, 1339, 1465, 1661, 1837
StyI CCWWGG 1 cut(s) 1448
TaaI ACNGT 3 cut(s) 253, 627, 806
TaiI ACGT 2 cut(s) 318, 1482
TaqI TCGA 8 cut(s) 389, 452, 861, 993, 1185, 1416, 1644, 1867
TaqII GACCGA 1 cut(s) 1682
TasI AATT 8 cut(s) 150, 481, 998, 1045, 1120, 1399, 1938, 1970
TauI GCSGC 4 cut(s) 33, 211, 304, 440
TfiI GAWTC 3 cut(s) 97, 449, 2102
Tru1I TTAA 9 cut(s) 285, 612, 810, 1002, 1049, 1760, 1859, 1889, 1941
Tru9I TTAA 9 cut(s) 285, 612, 810, 1002, 1049, 1760, 1859, 1889, 1941
TscAI CASTG 4 cut(s) 683, 1290, 1508, 1538
TseFI GTSAC 2 cut(s) 1367, 1469
TseI GCWGC 7 cut(s) 107, 184, 309, 1066, 1528, 1600, 1603
Tsp45I GTSAC 2 cut(s) 1367, 1469
TspDTI ATGAA 7 cut(s) 580, 1164, 1211, 1404, 1610, 1630, 2064
TspRI CASTG 4 cut(s) 683, 1290, 1508, 1538
Vha464I CTTAAG 1 cut(s) 611
VpaK11BI GGWCC 5 cut(s) 54, 325, 1055, 1327, 1665
XapI RAATTY 2 cut(s) 998, 1970
XcmI CCANNNNNNNNNTGG 1 cut(s) 1265
XhoI CTCGAG 1 cut(s) 1866
XmiI GTMKAC 1 cut(s) 622
XmnI GAANNNNTTC 2 cut(s) 1348, 1881
XspI CTAG 3 cut(s) 714, 953, 1548
Zsp2I ATGCAT 1 cut(s) 649
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.