Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0001645

Physical Location & Seq

Genomic Coordinates Reverse (-)

14884930 .. 14888196

Gene Structure 3267 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1175400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1200 bp

ATGTCGATAAGGAGTATAATCCAGGACATGAAGTTCTCGCGGTCGCAGCGGGTGGTGCAGGACTCGGCGGCTCGGCCGGGCGGCCAGGCGGTGGGGGAGTCGTTGAAGCAGAGCTGCTGGGCTCAGATGCCTCAGGAGTTACTCAGAGAGGTTCTGGTCAGAATCGAGGCTTCGGAGGCCGCCTGGCCGCCGCGCAAGAGCGTCGTCGCCTGCGCCGGTGTCTGCCGGAGTTGGAGACACCTCACCAAGGAGATCGTCAAGGCTCCTGAACTCTCTGGAAAGTTGACCTTCCCCATCTCCGTCAAGCAGCCTGGTCCAAGGGATGATCTCGTGCAGTGCTTTATCAAACGGAACCGTTCCGACCAAACATATTATCTTTTTCTTGGTTTGACCCCTGCTCTAATTGACGAAGGCAAGTTCCTACTTGCTGCGCGCAAGTTTAAACGCCCCACCTGCACTGATTATGTTATCTCACTGTATGCTGATGATATGTCAAAGGGGAGCAGCTACTATGTTGGGAAACTGAGATCAAACTTCTTGGGAACAAAGTTTACAATCTTTGATGGGCAGCCGAGTCATTCGGGAGCCAAGATTGCAAAAAGTCGCTCCACTAGGCTTGTCAATTTGAAACAAGTTTCCCCTAGAGTCCCTGCTGGCAACTATCCGGTGGCTCAAATCCAATATGAACTAAATATGTTGGGTTCCAGGGGTCCGAGGAGAATGCAGTGTACCATGGATTCAATTCCATCCTCTTCAATTGAGCCTGGAGGAGTAGCCCCCACACAGGCAGAGTTTTCACATAGCAATGCAGAATTATTTCCATCCCTCTCATTTAATCGATCGAAATCAAACCGCATGGAGAGTTTCCTGTCAGGGCCTTTGGCCAGACAGAAAGATGGGGTGCTGGTGTTAAGAAACAAGTCTCCTCGGTGGCATGAGCAACTCCAGTGTTGGTGTTTGAACTTTCATGGACGAGTAACAGTTGCTTCAGTGAAGAACTTTCAGTTGGTGGCTTCTCCGGAAAATGGACCCCCTGGGCCAGAACACGAGAAGATCATCCTCCAATTTGGAAAAGTGGGCAAGGATCAATTTACCATGGATTACCGGTATCCAATATCAGCGTTCCAGGCATTTTCAATCTGCCTCAGCAGCTTTGACACCAAGATTGCCTTTAGGTTTAAAGGTCACTTAGTGGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005488 GO:0005543 GO:0006355 GO:0008150 GO:0008289 GO:0009605 GO:0009607 GO:0009620 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0035091 GO:0043167 GO:0043168 GO:0043207 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

F-box Tub

Protein Analysis

400

Amino Acids

44.59

Weight (kDa)

9.81

Isoelectric Point (pI)

55.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Tub	PF01167	101 - 387	3.5e-106	Tub family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001645)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47900 AT2G47900 AT2G47900
fragaria_vesca	FvH4_2g24790 FvH4_2g24790 FvH4_4g17170 FvH4_4g17170
malus_domestica	MD03G1277100.v1.1 MD11G1298700.v1.1 MD13G1174100.v1.1 MD16G1175400.v1.1
prunus_persica	Prupe.1G142500_v2.0.a1 Prupe.1G142500_v2.0.a1 Prupe.8G253000_v2.0.a1
pyrus_communis	pycom03g22080 pycom11g26220 pycom16g14710
rosa_chinensis	RchiOBHm_Chr4g0420951 RchiOBHm_Chr5g0065161 RchiOBHm_Chr6g0292621
rosa_laevigata	RLG00000007717 RLG00000012006 RLG00000035763
rosa_multiflora	Rmu_co8302979.1_g000001 Rmu_co8397385.1_g000001 Rmu_sc0000515.1_g000008 Rmu_sc0000956.1_g000003 Rmu_sc0009773.1_g000001 Rmu_sc0009911.1_g000003
rosa_roxburghii	Rroxscaffold_1G00016160 Rroxscaffold_5G00363320 Rroxscaffold_7G00174860
rosa_rugosa	Rorug04G0167300 Rorug04G0167400 Rorug04G0167500 Rorug05G0368900 Rorug06G0228400
rosa_samantha	Rh4AG228500 Rh4BG231700 Rh4CG243400 Rh4DG227100 Rh5DG454900 Rh6AG341700 Rh6BG349000 Rh6CG355900 Rh6DG342000
rosa_wichuraiana	Rw4G019780 Rw5G040100 Rw6G029780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	461
Acc36I	ACCTGC	1 cut(s)	461
AccB7I	CCANNNNNTGG	1 cut(s)	91
AccII	CGCG	3 cut(s)	40, 193, 433
AccIII	TCCGGA	1 cut(s)	1018
AciI	CCGC	9 cut(s)	40, 49, 68, 81, 89, 180, 188, 191, 853
AclWI	GGATC	1 cut(s)	1092
AcoI	YGGCCR	4 cut(s)	74, 82, 185, 882
AcuI	CTGAAG	1 cut(s)	972
AdeI	CACNNNGTG	1 cut(s)	1192
AfaI	GTAC	1 cut(s)	730
AfiI	CCNNNNNNNGG	4 cut(s)	91, 247, 784, 1025
AgeI	ACCGGT	1 cut(s)	1104
AgsI	TTSAA	6 cut(s)	106, 628, 741, 756, 961, 1137
AjnI	CCWGG	8 cut(s)	21, 84, 182, 310, 704, 763, 1033, 1125
AjuI	GAANNNNNNNTTGG	2 cut(s)	989, 1021
AloI	GAACNNNNNNTCC	2 cut(s)	17, 49
AluBI	AGCT	3 cut(s)	114, 507, 1152
AluI	AGCT	3 cut(s)	114, 507, 1152
Alw26I	GTCTC	2 cut(s)	229, 927
AlwI	GGATC	1 cut(s)	1092
Aor13HI	TCCGGA	1 cut(s)	1018
AoxI	GGCC	7 cut(s)	74, 82, 177, 185, 875, 882, 1037
ApeKI	GCWGC	7 cut(s)	46, 114, 307, 428, 504, 568, 1149
AsiGI	ACCGGT	1 cut(s)	1104
Asp700I	GAANNNNTTC	1 cut(s)	816
AspLEI	GCGC	4 cut(s)	195, 215, 433, 435
AspS9I	GGNCC	5 cut(s)	314, 710, 875, 1028, 1037
AsuC2I	CCSGG	1 cut(s)	78
AsuHPI	GGTGA	1 cut(s)	235
AvaII	GGWCC	3 cut(s)	314, 710, 1028
AxyI	CCTNAGG	1 cut(s)	132
BalI	TGGCCA	1 cut(s)	884
BanII	GRGCYC	1 cut(s)	124
BauI	CACGAG	2 cut(s)	329, 1046
BbvCI	CCTCAGC	1 cut(s)	1145
BbvI	GCAGC	7 cut(s)	58, 101, 319, 415, 516, 580, 1161
BccI	CCATC	5 cut(s)	302, 557, 754, 829, 890
BcgI	CGANNNNNNTGC	4 cut(s)	184, 218, 703, 737
BciT130I	CCWGG	8 cut(s)	23, 86, 184, 312, 706, 765, 1035, 1127
BciVI	GTATCC	1 cut(s)	1119
BcnI	CCSGG	1 cut(s)	78
BcoDI	GTCTC	2 cut(s)	229, 927
BfaI	CTAG	2 cut(s)	612, 642
BfuAI	ACCTGC	1 cut(s)	461
BfuI	GTATCC	1 cut(s)	1119
Bme1390I	CCNGG	9 cut(s)	23, 78, 86, 184, 312, 706, 765, 1035, 1127
Bme18I	GGWCC	3 cut(s)	314, 710, 1028
BmgT120I	GGNCC	5 cut(s)	314, 710, 875, 1028, 1037
BmiI	GGNNCC	6 cut(s)	264, 353, 586, 703, 711, 1030
BmrFI	CCNGG	9 cut(s)	23, 78, 86, 184, 312, 706, 765, 1035, 1127
BmsI	GCATC	1 cut(s)	117
BpmI	CTGGAG	2 cut(s)	786, 929
Bpu10I	CCTNAGC	1 cut(s)	1145
BpuMI	CCSGG	1 cut(s)	78
Bsa29I	ATCGAT	1 cut(s)	838
BsaBI	GATNNNNATC	1 cut(s)	844
BsaJI	CCNNGG	9 cut(s)	246, 317, 705, 713, 732, 926, 1033, 1034, 1095
BsaWI	WCCGGW	3 cut(s)	664, 1018, 1104
Bsc4I	CCNNNNNNNGG	4 cut(s)	91, 247, 784, 1025
Bse118I	RCCGGY	2 cut(s)	215, 1104
Bse1I	ACTGG	1 cut(s)	946
Bse21I	CCTNAGG	1 cut(s)	132
Bse3DI	GCAATG	1 cut(s)	811
Bse8I	GATNNNNATC	1 cut(s)	844
BseAI	TCCGGA	1 cut(s)	1018
BseBI	CCWGG	8 cut(s)	23, 86, 184, 312, 706, 765, 1035, 1127
BseCI	ATCGAT	1 cut(s)	838
BseDI	CCNNGG	9 cut(s)	246, 317, 705, 713, 732, 926, 1033, 1034, 1095
BseGI	GGATG	4 cut(s)	328, 746, 821, 1056
BseJI	GATNNNNATC	1 cut(s)	844
BseLI	CCNNNNNNNGG	4 cut(s)	91, 247, 784, 1025
BseMI	GCAATG	1 cut(s)	811
BseMII	CTCAG	5 cut(s)	137, 146, 157, 515, 1159
BseNI	ACTGG	1 cut(s)	946
BsePI	GCGCGC	1 cut(s)	431
BseRI	GAGGAG	3 cut(s)	730, 783, 915
BseX3I	CGGCCG	1 cut(s)	74
BseXI	GCAGC	7 cut(s)	58, 101, 319, 415, 516, 580, 1161
BseYI	CCCAGC	1 cut(s)	117
BsgI	GTGCAG	3 cut(s)	77, 353, 439
Bsh1236I	CGCG	3 cut(s)	40, 193, 433
Bsh1285I	CGRYCG	3 cut(s)	44, 77, 842
BshFI	GGCC	7 cut(s)	76, 84, 179, 187, 877, 884, 1039
BshTI	ACCGGT	1 cut(s)	1104
BshVI	ATCGAT	1 cut(s)	838
BsiEI	CGRYCG	3 cut(s)	44, 77, 842
BsiSI	CCGG	6 cut(s)	77, 216, 226, 665, 1019, 1105
BslFI	GGGAC	1 cut(s)	632
BslI	CCNNNNNNNGG	4 cut(s)	91, 247, 784, 1025
BsmAI	GTCTC	2 cut(s)	229, 927
BsmFI	GGGAC	1 cut(s)	632
BsmI	GAATGC	1 cut(s)	726
BsnI	GGCC	7 cut(s)	76, 84, 179, 187, 877, 884, 1039
Bsp1286I	GDGCHC	1 cut(s)	124
Bsp13I	TCCGGA	1 cut(s)	1018
Bsp143I	GATC	6 cut(s)	252, 325, 527, 839, 1053, 1084
Bsp19I	CCATGG	2 cut(s)	732, 1095
BspACI	CCGC	9 cut(s)	40, 49, 68, 81, 89, 180, 188, 191, 853
BspANI	GGCC	7 cut(s)	76, 84, 179, 187, 877, 884, 1039
BspCNI	CTCAG	5 cut(s)	136, 145, 156, 516, 1158
BspDI	ATCGAT	1 cut(s)	838
BspEI	TCCGGA	1 cut(s)	1018
BspFNI	CGCG	3 cut(s)	40, 193, 433
BspLI	GGNNCC	6 cut(s)	264, 353, 586, 703, 711, 1030
BspMI	ACCTGC	1 cut(s)	461
BspPI	GGATC	1 cut(s)	1092
BsrDI	GCAATG	1 cut(s)	811
BsrFI	RCCGGY	2 cut(s)	215, 1104
BsrI	ACTGG	1 cut(s)	946
BssAI	RCCGGY	2 cut(s)	215, 1104
BssECI	CCNNGG	9 cut(s)	246, 317, 705, 713, 732, 926, 1033, 1034, 1095
BssHII	GCGCGC	1 cut(s)	431
BssMI	GATC	6 cut(s)	252, 325, 527, 839, 1053, 1084
BssSI	CACGAG	2 cut(s)	329, 1046
BssT1I	CCWWGG	4 cut(s)	246, 317, 732, 1095
Bst2BI	CACGAG	2 cut(s)	329, 1046
Bst2UI	CCWGG	8 cut(s)	23, 86, 184, 312, 706, 765, 1035, 1127
Bst4CI	ACNGT	3 cut(s)	356, 477, 982
Bst6I	CTCTTC	1 cut(s)	757
BstC8I	GCNNGC	3 cut(s)	211, 433, 655
BstDEI	CTNAG	6 cut(s)	123, 132, 143, 524, 1145, 1189
BstDSI	CCRYGG	2 cut(s)	732, 1095
BstENI	CCTNNNNNAGG	1 cut(s)	245
BstF5I	GGATG	4 cut(s)	328, 746, 821, 1056
BstFNI	CGCG	3 cut(s)	40, 193, 433
BstHHI	GCGC	4 cut(s)	195, 215, 433, 435
BstKTI	GATC	6 cut(s)	255, 328, 530, 842, 1056, 1087
BstMAI	GTCTC	2 cut(s)	229, 927
BstMBI	GATC	6 cut(s)	252, 325, 527, 839, 1053, 1084
BstMCI	CGRYCG	3 cut(s)	44, 77, 842
BstMWI	GCNNNNNNNGC	7 cut(s)	46, 55, 176, 453, 593, 1127, 1149
BstNI	CCWGG	8 cut(s)	23, 86, 184, 312, 706, 765, 1035, 1127
BstSCI	CCNGG	9 cut(s)	21, 76, 84, 182, 310, 704, 763, 1033, 1125
BstUI	CGCG	3 cut(s)	40, 193, 433
BstV1I	GCAGC	7 cut(s)	58, 101, 319, 415, 516, 580, 1161
BstZI	CGGCCG	1 cut(s)	74
Bsu15I	ATCGAT	1 cut(s)	838
Bsu36I	CCTNAGG	1 cut(s)	132
BsuI	GTATCC	1 cut(s)	1119
BsuRI	GGCC	7 cut(s)	76, 84, 179, 187, 877, 884, 1039
BsuTUI	ATCGAT	1 cut(s)	838
BtgI	CCRYGG	2 cut(s)	732, 1095
BtsCI	GGATG	4 cut(s)	328, 746, 821, 1056
BtsI	GCAGTG	2 cut(s)	341, 731
BtsIMutI	CAGTG	6 cut(s)	341, 456, 473, 731, 953, 996
BveI	ACCTGC	1 cut(s)	461
Cac8I	GCNNGC	3 cut(s)	211, 433, 655
CfoI	GCGC	4 cut(s)	195, 215, 433, 435
Cfr10I	RCCGGY	2 cut(s)	215, 1104
Cfr13I	GGNCC	5 cut(s)	314, 710, 875, 1028, 1037
ClaI	ATCGAT	1 cut(s)	838
CseI	GACGC	1 cut(s)	190
Csp6I	GTAC	1 cut(s)	729
CspAI	ACCGGT	1 cut(s)	1104
CspCI	CAANNNNNGTGG	2 cut(s)	598, 633
CviAII	CATG	6 cut(s)	28, 733, 856, 935, 968, 1096
CviQI	GTAC	1 cut(s)	729
DdeI	CTNAG	6 cut(s)	123, 132, 143, 524, 1145, 1189
DpnI	GATC	6 cut(s)	254, 327, 529, 841, 1055, 1086
DpnII	GATC	6 cut(s)	252, 325, 527, 839, 1053, 1084
DraI	TTTAAA	2 cut(s)	442, 1180
DraIII	CACNNNGTG	1 cut(s)	1192
EaeI	YGGCCR	4 cut(s)	74, 82, 185, 882
EagI	CGGCCG	1 cut(s)	74
Eam1104I	CTCTTC	1 cut(s)	757
EarI	CTCTTC	1 cut(s)	757
EclXI	CGGCCG	1 cut(s)	74
Eco130I	CCWWGG	4 cut(s)	246, 317, 732, 1095
Eco24I	GRGCYC	1 cut(s)	124
Eco47I	GGWCC	3 cut(s)	314, 710, 1028
Eco52I	CGGCCG	1 cut(s)	74
Eco57I	CTGAAG	1 cut(s)	972
Eco81I	CCTNAGG	1 cut(s)	132
EcoNI	CCTNNNNNAGG	1 cut(s)	245
EcoO109I	RGGNCCY	1 cut(s)	875
EcoRII	CCWGG	8 cut(s)	21, 84, 182, 310, 704, 763, 1033, 1125
EcoT14I	CCWWGG	4 cut(s)	246, 317, 732, 1095
EcoT38I	GRGCYC	1 cut(s)	124
ErhI	CCWWGG	4 cut(s)	246, 317, 732, 1095
FaeI	CATG	6 cut(s)	31, 736, 859, 938, 971, 1099
FalI	AAGNNNNNCTT	4 cut(s)	272, 304, 1154, 1186
FaqI	GGGAC	1 cut(s)	632
FatI	CATG	6 cut(s)	27, 732, 855, 934, 967, 1095
FauI	CCCGC	1 cut(s)	42
FokI	GGATG	4 cut(s)	335, 733, 808, 1043
FriOI	GRGCYC	1 cut(s)	124
FspBI	CTAG	2 cut(s)	612, 642
GlaI	GCGC	4 cut(s)	194, 214, 432, 434
GsaI	CCCAGC	1 cut(s)	121
GsuI	CTGGAG	2 cut(s)	786, 929
HaeIII	GGCC	7 cut(s)	76, 84, 179, 187, 877, 884, 1039
HapII	CCGG	6 cut(s)	77, 216, 226, 665, 1019, 1105
HgaI	GACGC	1 cut(s)	190
HhaI	GCGC	4 cut(s)	195, 215, 433, 435
Hin1II	CATG	6 cut(s)	31, 736, 859, 938, 971, 1099
Hin6I	GCGC	4 cut(s)	193, 213, 431, 433
HinP1I	GCGC	4 cut(s)	193, 213, 431, 433
HincII	GTYRAC	1 cut(s)	285
HindII	GTYRAC	1 cut(s)	285
HinfI	GANTC	6 cut(s)	62, 98, 162, 574, 645, 737
HpaII	CCGG	6 cut(s)	77, 216, 226, 665, 1019, 1105
HphI	GGTGA	1 cut(s)	235
Hpy166II	GTNNAC	3 cut(s)	285, 552, 729
Hpy188I	TCNGA	6 cut(s)	126, 146, 161, 175, 361, 714
Hpy188III	TCNNGA	5 cut(s)	134, 266, 276, 582, 1019
Hpy8I	GTNNAC	3 cut(s)	285, 552, 729
Hpy99I	CGWCG	2 cut(s)	206, 209
HpyAV	CCTTC	2 cut(s)	298, 404
HpyCH4III	ACNGT	3 cut(s)	356, 477, 982
HpyCH4V	TGCA	6 cut(s)	58, 334, 456, 596, 724, 809
HpyF10VI	GCNNNNNNNGC	7 cut(s)	46, 55, 176, 453, 593, 1127, 1149
HpyF3I	CTNAG	6 cut(s)	123, 132, 143, 524, 1145, 1189
Hsp92II	CATG	6 cut(s)	31, 736, 859, 938, 971, 1099
HspAI	GCGC	4 cut(s)	193, 213, 431, 433
Kpn2I	TCCGGA	1 cut(s)	1018
Kzo9I	GATC	6 cut(s)	252, 325, 527, 839, 1053, 1084
LmnI	GCTCC	4 cut(s)	268, 501, 584, 611
Lsp1109I	GCAGC	7 cut(s)	58, 101, 319, 415, 516, 580, 1161
LweI	GCATC	1 cut(s)	117
MaeI	CTAG	2 cut(s)	612, 642
MaeIII	GTNAC	3 cut(s)	138, 976, 1184
MalI	GATC	6 cut(s)	254, 327, 529, 841, 1055, 1086
MboI	GATC	6 cut(s)	252, 325, 527, 839, 1053, 1084
MboII	GAAGA	3 cut(s)	744, 1006, 1063
MfeI	CAATTG	1 cut(s)	756
MhlI	GDGCHC	1 cut(s)	124
MlsI	TGGCCA	1 cut(s)	884
MluCI	AATT	7 cut(s)	402, 622, 741, 756, 812, 1064, 1088
MluNI	TGGCCA	1 cut(s)	884
MlyI	GAGTC	4 cut(s)	56, 107, 583, 654
MmeI	TCCRAC	2 cut(s)	212, 384
Mox20I	TGGCCA	1 cut(s)	884
MroI	TCCGGA	1 cut(s)	1018
MroXI	GAANNNNTTC	1 cut(s)	816
MscI	TGGCCA	1 cut(s)	884
MseI	TTAA	4 cut(s)	441, 834, 911, 1179
MslI	CAYNNNNRTG	1 cut(s)	804
Msp20I	TGGCCA	1 cut(s)	884
MspA1I	CMGCKG	1 cut(s)	49
MspI	CCGG	6 cut(s)	77, 216, 226, 665, 1019, 1105
MspR9I	CCNGG	9 cut(s)	23, 78, 86, 184, 312, 706, 765, 1035, 1127
MssI	GTTTAAAC	1 cut(s)	442
MunI	CAATTG	1 cut(s)	756
Mva1269I	GAATGC	1 cut(s)	726
MvaI	CCWGG	8 cut(s)	23, 86, 184, 312, 706, 765, 1035, 1127
MvnI	CGCG	3 cut(s)	40, 193, 433
MwoI	GCNNNNNNNGC	7 cut(s)	46, 55, 176, 453, 593, 1127, 1149
NciI	CCSGG	1 cut(s)	78
NcoI	CCATGG	2 cut(s)	732, 1095
NdeII	GATC	6 cut(s)	252, 325, 527, 839, 1053, 1084
NlaIII	CATG	6 cut(s)	31, 736, 859, 938, 971, 1099
NlaIV	GGNNCC	6 cut(s)	264, 353, 586, 703, 711, 1030
NmeAIII	GCCGAG	3 cut(s)	44, 52, 597
NmuCI	GTSAC	1 cut(s)	1184
PaqCI	CACCTGC	1 cut(s)	461
PasI	CCCWGGG	1 cut(s)	1034
PauI	GCGCGC	1 cut(s)	431
PctI	GAATGC	1 cut(s)	726
PdmI	GAANNNNTTC	1 cut(s)	816
PfeI	GAWTC	2 cut(s)	162, 737
PflMI	CCANNNNNTGG	1 cut(s)	91
PfoI	TCCNGGA	1 cut(s)	21
PinAI	ACCGGT	1 cut(s)	1104
Ple19I	CGATCG	1 cut(s)	842
PleI	GAGTC	4 cut(s)	56, 106, 582, 653
PmeI	GTTTAAAC	1 cut(s)	442
PpsI	GAGTC	4 cut(s)	56, 106, 582, 653
Psp6I	CCWGG	8 cut(s)	21, 84, 182, 310, 704, 763, 1033, 1125
PspFI	CCCAGC	1 cut(s)	117
PspGI	CCWGG	8 cut(s)	21, 84, 182, 310, 704, 763, 1033, 1125
PspN4I	GGNNCC	6 cut(s)	264, 353, 586, 703, 711, 1030
PspPI	GGNCC	5 cut(s)	314, 710, 875, 1028, 1037
PsrI	GAACNNNNNNTAC	2 cut(s)	535, 567
PteI	GCGCGC	1 cut(s)	431
PvuI	CGATCG	1 cut(s)	842
RsaI	GTAC	1 cut(s)	730
RsaNI	GTAC	1 cut(s)	729
RseI	CAYNNNNRTG	1 cut(s)	804
SaqAI	TTAA	4 cut(s)	441, 834, 911, 1179
Sau3AI	GATC	6 cut(s)	252, 325, 527, 839, 1053, 1084
Sau96I	GGNCC	5 cut(s)	314, 710, 875, 1028, 1037
SchI	GAGTC	4 cut(s)	56, 107, 583, 654
ScrFI	CCNGG	9 cut(s)	23, 78, 86, 184, 312, 706, 765, 1035, 1127
SduI	GDGCHC	1 cut(s)	124
SetI	ASST	9 cut(s)	116, 153, 243, 290, 455, 509, 1154, 1178, 1186
SfaNI	GCATC	1 cut(s)	117
SgrAI	CRCCGGYG	1 cut(s)	215
SinI	GGWCC	3 cut(s)	314, 710, 1028
SmiMI	CAYNNNNRTG	1 cut(s)	804
Sse9I	AATT	7 cut(s)	402, 622, 741, 756, 812, 1064, 1088
SsiI	CCGC	9 cut(s)	40, 49, 68, 81, 89, 180, 188, 191, 853
SspMI	CTAG	2 cut(s)	612, 642
StyD4I	CCNGG	9 cut(s)	21, 76, 84, 182, 310, 704, 763, 1033, 1125
StyI	CCWWGG	4 cut(s)	246, 317, 732, 1095
TaaI	ACNGT	3 cut(s)	356, 477, 982
TaqI	TCGA	4 cut(s)	5, 165, 838, 842
TasI	AATT	7 cut(s)	402, 622, 741, 756, 812, 1064, 1088
TauI	GCSGC	5 cut(s)	71, 84, 182, 190, 193
TfiI	GAWTC	2 cut(s)	162, 737
Tru1I	TTAA	4 cut(s)	441, 834, 911, 1179
Tru9I	TTAA	4 cut(s)	441, 834, 911, 1179
TscAI	CASTG	6 cut(s)	341, 463, 480, 731, 953, 996
TseFI	GTSAC	1 cut(s)	1184
TseI	GCWGC	7 cut(s)	46, 114, 307, 428, 504, 568, 1149
Tsp45I	GTSAC	1 cut(s)	1184
TspDTI	ATGAA	3 cut(s)	44, 699, 956
TspGWI	ACGGA	2 cut(s)	289, 364
TspRI	CASTG	6 cut(s)	341, 463, 480, 731, 953, 996
Van91I	CCANNNNNTGG	1 cut(s)	91
VpaK11BI	GGWCC	3 cut(s)	314, 710, 1028
XagI	CCTNNNNNAGG	1 cut(s)	245
XmnI	GAANNNNTTC	1 cut(s)	816
XspI	CTAG	2 cut(s)	612, 642

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.