Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0001752

Physical Location & Seq

Genomic Coordinates Reverse (-)

9665158 .. 9673968

Gene Structure 8811 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1133400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 6153 bp

ATGGATCCCTCTCAGTATCCCCACCACCTCACAAGGTACGCTTCTTCTTCTTCTTCCAATCCCTACCCTTCCGACAACCCTTCAAATTTCCCAAACTACTCTCACCGCCACCACAACACCAACCACCACTACACACACCACCACCACTCACAACAACCACCACCACCACAGCAACTCCTCCAACCTCCACCCCCTCCACCACCGCCCCAAACGTCGCCGTATAACTCTCTCCCCCCACCGCCCCTGCCCCCGCCCCCGCCCCCCCCACATCCTTACAACCCCAACCAGCCCCAACTCACCTTCGAACCCGAACGCTCCAGAACCTTCCTCCCCCTTCACGACTACCCCGTCTCCTCCCCTCGGGTCGCCCATTCGGAGCGCCCTCGCCACCACCGATTGCTCCAATTTGAATCGCCCTACGTCGAATCCAATCCCGTTTCTTGGGATTCTTCAAGGGCTTTTCACGATTACGATCGTGAATTGCATAAACCCCAATTTAGGGTTGAATCAGAGGGTAGTGGTAGCGCTAGGTTTAGGGCTGACTACAATGAACAGCTGCTCCGGGAACATCGGGCCCCCGTGGACGACGATTATAACAGTCGCCGCCGTGCTCGTGCAGAACCCAGTTCCGATGGAAAGTATCGCGAATTGGGGTTTGCGTCAAGCCAGAATTTGAATAGTCATTTGGATTCGAATTCGGGTGGTTATGATGGCCGGTATGATGAGTTGAGGAGTGGTGGTAGGAGAGATGAGGTGTATGAGAATAATCAGAGATGGGTTCATAATGATAGAGAAGCTACTAGAGAGTTATATGATCCATTCGTGTTCGATGAGGGTAACAGGGGCCGGAATGTTTTGGCGAAACGGGATTATTATGGTTCAGAATCTGAAAGAGGGAGTGGTACTAGTAATAGGAGGAAGCAGATACAAAAGAAGAGTGTTTTACTCAGGCTTCAAACTGTGAAACCTAGTCACCGGAATGGCTCTGCTTATTTTGATAATTCTGGCTCTAGTTCCCACAGAGGGAAAGGATACTATGAGTATTCGGGTCGCGAGATGGGTGAAGTTGAGAAAGGTGCGAATTCTTTGGAACTTGATGTTTCTTTTAAATCGAATTCACTAGTGGCGAAGGCAGTTGGAAATAGGGATGTTAAGACAGATTCAGTGTATGGCAGGGATTTCTCAAATTTGAAACTCAGTAGAGACAGTGAGAATGCTGCACCTGTACGTTTGCGAAGCTCCATAGTTGTTGCAAATAAGACATCCAGTTCAGACAAGGACCCACGACAGTTGGAAGAGGAGGTGAACACTTCTGGTATGGAGAATAGGTGTGATATCGAACAGCCCGGTTCTAATGTGAATGGTGATTCTTCTGGAAAGAGTGAAGTGGAAAGGGTTACAAAGGGTAACACAAAGGGTAAGGTTTTACAAAGAGATGGTAAAAAGGGTGTTTCTGCTCAAATGTCTTCTCTTAAGGTTACTAAGAAGAAAAAAGTGGTGAAGAAAGTAGTGAAAAAGGTCGTAAACCCTCGTCCACAGCCAAAAAAGAAGATTGATGAACCACGGGCAGCAGATAGCTATATTTGTAGCCCATCTGCAGCCTTTGGGACTGAAAAGGGTGAAACCTCTTCACCGAGCATGGTATCGGATGAACATGGCACTGATGCCAACTCTTGTAGTAAGAGCACTGGGAAAACTTCAACTTGTAATTTGGGTTCTTCAAGTTGTGAAGAAATTAATATTGATCAGGGTTGTCTAACTGTAGATGCTTCTGTCCAGGGCTTGCTTAAGAGTTCAAATTTTACCAACAATGTAACTGATTCACTTAGGGTAGCTACTTGTCCAGAAACTGGTTGCGTTGTAGATGTCAGCAAACAGATATGTCAGAGTGGAGACAGTTTATCGCTTGATAATGTCATACGAACAGAATCATCAGAGCCCAGATTGTCTGTAGAAGGCAATGCCAATTCTGGTTTTTTAAGTTCAGAGAAAACTATGATGCATGGAGACATTATGAATGTAAATGGCTCTGGCCATGGTGCAGAAACCAACTTGGATATTGATGGTGGTATAAAAGTATCTTATCAAGAAGTCATGGTTCATAACATTGGTAATGTGGATGCCATCAGCGAGCAACCTTGTACACATCAGCTCCCAACATCACTACAAATTGGTTCTGTGGAAGAACTTCCAAAGGCTATATCTGCAGCAGAAAGCAGCATAACTGTTGGTTTATCAAGTTCGGGGAAGACCTTTGCTGTCTGCTCCGATGATGGTAGAGGTACCACGTGGAACTCTGACAAAGTTAGTACTAATTATGATGAGAATATTATTGTTCCTAATGGTGGGAATGCCGATTTTGTCGGCACGCAAGCATCTGCAGATGGTGCCTCCAGATTATTTGTTAGTTGTGGCACCGAAAGATCTTCAAAGATTGCAAATTCAGTTGGAGATCGGAAGAGTGTTACATTCAAGATTAAAAAGAAGAGAAAATTTAGGACTCTGTTAGACTCTTCAAGGGCCTCCAACACTATTGTAGAGCCTAAAAATGTTTCTGCCCATGAAAATTCTGTGGATACGGCAGTAAGTTCATCCCTGAAGGATGCTAGTCATGCAGAAGTTGCTGTTTCTGGTGTTGAAAAGTTAGATATTGGCTCTCAACCTGATAATGACGGGGTCAGTGTTCTGCGTGGGAACAGCTCACTAGATGGGATTTGTGAGGCTAAGTTATCAGCTAGAAGTGATGTTAACTCTGATCCTGATGAGACTTCTCTGAAGTATATAAAGAGGAGAAAAGTATCCACCTCTCATCTGGTAGGGACTACCTCTCAAACCAATGATGGACCTGCAGATAAGTCTACATCTTATGCAGAAGCACCTTGGACTAACGATGATCCAACACAAGAAGATGAAGTTACTGCTTCCAGCATAGGTTTTCTCTCTGCTAATGCTAATTTAATTCCTTCTCAAGAGGGAAGCACTGTATTATTTGTGGATGATTTAGCGGCTGTATCTGCAGCTAGGGATGCCCTTACTAATGATGGTATGAACTTTGAGCACCAAGGTGTTGAATCATGTACAATTTATGAAGAATCAGTTCCGGATACATCGTTCCTTTGTCCCTCACCATCGAGGAATGAACAGAAAGAGGCTAGCACTCAAGCTCTGGTTGTAAATAGCCCTCAGCTTGACATTATGGACGTAGAAAGTAACCTAGAAGAAAATTTTGGTATATTTTCAACAGCTGAGCAAGTTATGATGCAAGGCGAGACTGCTTCATGCAGCGTTTCTTCAGAAGTCCAGCCTCCAGACTCAAGCAATAAATTTTCCTGCACAGATATGGAATCAAATTATGTCTCTGTGAAGGAGAAATTGCCCATTGCGTCAAATTATCTGTTGTTATGTGCCAATAACAATGAAGTATCTACTACTAACTCTAATGATGAAGGAACGGAGTTTGTGCATGATACAGTATCAGATAAGGGTTCTCCAGAAACTTCAACTGATGTCCCTTACTTGCAGATGCTACCTTGTAGTCCATCAGTTATCAAAATTTCTGATGAAAAAGCTGGTGGGGACCAGCAATTGGATTTGAAGTCTGTGGTTGAAGGTGGTTCCAATGCATCTGCTCAAAATTCATCATCAGGTGGTACCAAATCAGTGATGGGGAAGTCAGTAGCTTTACCTTTGCAAAATATCAAAAAGGCAACTCATGGTTCGAATCTAGTAAGCACAGAATCTGGTTTGAAGAACCAGCTGGGTCAAGCCACTCGTGGGATTGTGCCAGGTCGTTCATATTCGGTCTCTTCTACCTCAATGAAGACTGCCTCTTCAACTCATATTGCAAAGCCTCGGACTTGGCATCGAAATGGTAATTCATCTTCATCTCCTCTTCCTGTAAGCATGCCTTTATCTAGTACTGTTCCACCCCAAAGGCAGTTGCCACAAAGGAATGGAAAATTTCAAAGTAATTCGTATGTGCGTAAAGGTAACAGCCTTGTTAGAAAACCTCCAGTCGCTGCTCTGCAAAGCTCCCATGGGTTTAGTTCAGCTGTTTATCAGTTGAACTCTTCAGGTATAGATGGTTTGAAGAAGAATGCAGGATCTGACAGTAGGATTGATGTGAAAATGCCTCCAAGTCTCATGAGAACTGGAGAAATGAATGCTCCTTTTGATAGGCCGACACCCCAACTACCTTTGGCACCCATATTATCTACTTGTCCTGCCATCTCTTTCGGGGTTCGTGCATCATCCCCAGTGTCTGAGCCTCTTAGTGGTGAAACCAAGTTAGATCCTATGAATTCTTTGGACACCAAAGATGCACAAACATTTGCCAAGGACTCACTGACAATTTCTGAAACTCAGGAAAATCACAGTGGTTCGCTCAATAATTTGGAAAACCAGAATGTACTGCATGATGAGAATTTGGCACCTCCAAATACCAAGAAGATTGTAAATGGAAAGTGCACGTTAAATCAGTTGGTTGCAACTTCAAATCCTTGTGACCTTCCGGTCCACAGTACTGATAAGATCCAGCACTCCTCTGATGGTTACTACAAGAGGCGCAAAAATCAGCTAATCAGGACATCCTTGGAAGGTCATGCTATCATGCCTGATGACAATTTAAACTTACAGCTGCAAAGGGTTCCTAAGATTGTCCCCAGAAGAACATATGGCAAGAAACGATCACACAAGGCTGTTGCAAAGACAAGTAAAATTGGAAAAAACTCTTTGGTGTGGACACCGCATGGTACACAGTCATCAAACAATGATGGTGGTTCACTTAACCATCAGAAGGTAGTGCCTTACCTGTTTCCATGGAAAAGAGCAAGACACTGGAGGACTTTCATGCAAAGTCAGGCTTCCAGTTTCAAATATAGTTCCGTACCCACAATCAGTAAGAAACTGCTGCTGTCAAGAAGGCGGGATACTTTGTACACTAAGTCAACTCATGGATTTTCGCTTAAAATGTACAAGGTATTAAGTGTTGGTGGGGCCAGTTTAAAATGGTCAAAATCCCTTGAAAGGCAATCAAAGGAAGCTAATGAGGAAGCTACACGTGCTGTTGCTGCAGTGGAGAAGAAGAAAAGAGAACACAATGGTGCTGCATGCATTAGTTTGGGGTCTAAGTTTAGAAGTAATTTGTCAGGAAAACGTATATTTCGCATTGGTTCTGTCCGGTACAAAATGGATCCTTCAAGGCGAACACTAAAAAGGATTTCAGATGACGAATCGTCAAGCTCTGGTGTGCTCGATCCTGAAAAGGATCCCAAGAGATCTTATGTTCCAAAGAGACTGGTGATTGGCAATGATGAATATTTGCGGATTGGCAATGGTAACCAGCTTATTAGAAATCCGAAGAAGAGAACTCGCATATTGGCTAGTGAAAGAGTTCGATGGAGTTTGCACACGGCCAGACTTCGGCTGGCAAAAAAGCGGAAGTACTGCCAGTTTTTTACAAGATTTGGGAAGTGCAATAAGGATGATGGAAAATGTCCCTATATCCATGACTCCTCTAAAGTTGCAGTCTGCACAAAGTTTTTGAAGGGTTTATGTTCCAATCCCAATTGCAAATTGACTCATCAGGTCATTCCTGAAAGAATGCCGGACTGTTCTTACTATTTGCAAGGTTTATGCTCCAATCAAAATTGTCCTTACAGACATGTGAATGTGAATCCAAAGGCATCTACTTGTGAAGGATTTCTTAAGGGCTATTGTGCTGACGGGAATGAGTGCCGGAAGAAGCATAGCTATGTTTGCCCGTCCTTTGAAGCTACTGGAACCTGTCCACGAGGGCCTAAATGCAAGCTTCACCACCCCAGAAACCGAGCAAAGGAAAAGAAAAGAAAACGATCAAGAGAACACAGAAATACTTGGGGCCGTTACTTTGTTTCCAAGGATATCACTGTTTCTGAACCGAGAACAGTGTCTGGAAAGCAGTCTGCACAGAACAGCGATGACATAATTGTTGATGGAGTCGCTGATTTCATTAGCATTGATGTTAGTGATGAGGAGGTTGGAGAAACTAATGATCCAATACAGGAGCAAGCTGCATATTGTGACAGCGATTCGTCGGAATTGGAATTAGATGATCTTGATGAGCTGATTAAACCAATTCGTTTACTGGAAAGGTTGAAGACAAATGCTTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005847 GO:0005849 GO:0006139 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0015031 GO:0015833 GO:0015931 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0016973 GO:0031123 GO:0031124 GO:0031503 GO:0031974 GO:0031981 GO:0032991 GO:0033036 GO:0034613 GO:0034641 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045184 GO:0046483 GO:0046907 GO:0050657 GO:0050658 GO:0051028 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0098787 GO:0098789 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

2051

Amino Acids

225.03

Weight (kDa)

8.83

Isoelectric Point (pI)

46.55

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0001752)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21580 AT1G21580 AT1G21580 AT1G21580 AT1G21580 AT1G21580 AT1G21580 AT1G21580 AT1G21580
fragaria_vesca	FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950
malus_domestica	MD08G1160000.v1.1 MD08G1160100.v1.1 MD08G1160200.v1.1 MD15G1133400.v1.1
prunus_persica	Prupe.1G489000_v2.0.a1 Prupe.1G489000_v2.0.a1 Prupe.1G489000_v2.0.a1
pyrus_communis	pycom08g13490 pycom08g13510
rosa_chinensis	RchiOBHm_Chr6g0296771
rosa_laevigata	RLG00000011660 RLG00000013665
rosa_multiflora	Rmu_ssc0000192.1_g000011
rosa_rugosa	Rorug06G0265800 Rorug06G0265800 Rorug06G0265900 Rorug06G0266000
rosa_samantha	Rh6AG376900 Rh6AG377000 Rh6BG385300 Rh6CG390500 Rh6DG377600
rosa_wichuraiana	Rw6G032950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	594
AasI	GACNNNNNNGTC	2 cut(s)	347, 4511
Acc36I	ACCTGC	1 cut(s)	2854
Acc65I	GGTACC	2 cut(s)	2282, 3650
AccB1I	GGYRCC	6 cut(s)	2282, 2387, 2414, 3650, 4201, 4429
AccB7I	CCANNNNNTGG	2 cut(s)	1850, 3586
AccI	GTMKAC	1 cut(s)	2858
AccII	CGCG	2 cut(s)	645, 1053
AccIII	TCCGGA	1 cut(s)	3100
AcoI	YGGCCR	3 cut(s)	712, 2032, 5412
AcuI	CTGAAG	4 cut(s)	2618, 2795, 3276, 4056
AcvI	CACGTG	2 cut(s)	2289, 5060
AfeI	AGCGCT	1 cut(s)	526
AflII	CTTAAG	3 cut(s)	1472, 1787, 5705
AflIII	ACRYGT	2 cut(s)	5057, 5662
AhdI	GACNNNNNGTC	1 cut(s)	5233
AhlI	ACTAGT	2 cut(s)	905, 1120
AjnI	CCWGG	2 cut(s)	1776, 3784
AjuI	GAANNNNNNNTTGG	4 cut(s)	668, 700, 3210, 3242
AleI	CACNNNNGTG	2 cut(s)	3063, 5100
AloI	GAACNNNNNNTCC	4 cut(s)	543, 575, 3095, 3127
Alw21I	GWGCWC	5 cut(s)	613, 1688, 3060, 4469, 5253
Alw44I	GTGCAC	1 cut(s)	4465
AlwNI	CAGNNNCTG	7 cut(s)	887, 1850, 3740, 4019, 4106, 4262, 5930
Ama87I	CYCGRG	1 cut(s)	360
Aor13HI	TCCGGA	1 cut(s)	3100
Aor51HI	AGCGCT	1 cut(s)	526
ApaI	GGGCCC	1 cut(s)	577
ApaLI	GTGCAC	1 cut(s)	4465
AseI	ATTAAT	1 cut(s)	1737
Asp700I	GAANNNNTTC	4 cut(s)	2187, 3096, 5391, 5700
Asp718I	GGTACC	2 cut(s)	2282, 3650
AspLEI	GCGC	3 cut(s)	381, 527, 4566
AsuC2I	CCSGG	2 cut(s)	563, 1347
AsuII	TTCGAA	3 cut(s)	303, 692, 3719
AsuNHI	GCTAGC	1 cut(s)	3152
AvaI	CYCGRG	1 cut(s)	360
AvaII	GGWCC	4 cut(s)	1279, 2843, 3577, 4513
BaeGI	GKGCMC	2 cut(s)	577, 4469
BaeI	ACNNNNGTAYC	2 cut(s)	2568, 2601
BalI	TGGCCA	1 cut(s)	2034
BamHI	GGATCC	3 cut(s)	4, 5191, 5266
BanI	GGYRCC	6 cut(s)	2282, 2387, 2414, 3650, 4201, 4429
BanII	GRGCYC	2 cut(s)	577, 1941
BarI	GAAGNNNNNNTAC	4 cut(s)	3865, 3897, 4912, 4944
BauI	CACGAG	3 cut(s)	612, 3771, 5790
BbrPI	CACGTG	2 cut(s)	2289, 5060
BbsI	GAAGAC	4 cut(s)	1458, 2255, 3827, 6143
Bbv12I	GWGCWC	5 cut(s)	613, 1688, 3060, 4469, 5253
BbvCI	CCTCAGC	1 cut(s)	3183
BceAI	ACGGC	5 cut(s)	202, 591, 2595, 5427, 5865
BciT130I	CCWGG	2 cut(s)	1778, 3786
BciVI	GTATCC	6 cut(s)	27, 1025, 2569, 2809, 3097, 4921
BclI	TGATCA	1 cut(s)	1744
BcnI	CCSGG	2 cut(s)	563, 1347
BcuI	ACTAGT	2 cut(s)	905, 1120
BfmI	CTRYAG	8 cut(s)	1596, 1761, 1950, 2205, 2379, 2847, 3015, 5070
BfoI	RGCGCY	2 cut(s)	382, 528
BfrI	CTTAAG	3 cut(s)	1472, 1787, 5705
BfuAI	ACCTGC	1 cut(s)	2854
BfuI	GTATCC	6 cut(s)	27, 1025, 2569, 2809, 3097, 4921
BglII	AGATCT	2 cut(s)	2423, 5276
BlpI	GCTNAGC	1 cut(s)	3246
BmcAI	AGTACT	4 cut(s)	2311, 3919, 4522, 5444
Bme1390I	CCNGG	4 cut(s)	563, 1347, 1778, 3786
Bme18I	GGWCC	4 cut(s)	1279, 2843, 3577, 4513
BmeRI	GACNNNNNGTC	1 cut(s)	5233
BmeT110I	CYCGRG	1 cut(s)	360
BmrFI	CCNGG	4 cut(s)	563, 1347, 1778, 3786
BmrI	ACTGGG	3 cut(s)	618, 1698, 4250
BmtI	GCTAGC	1 cut(s)	3156
BmuI	ACTGGG	3 cut(s)	618, 1698, 4250
BpiI	GAAGAC	4 cut(s)	1458, 2255, 3827, 6143
BpmI	CTGGAG	7 cut(s)	301, 2377, 3291, 3474, 3996, 4173, 4858
Bpu10I	CCTNAGC	1 cut(s)	3183
Bpu1102I	GCTNAGC	1 cut(s)	3246
Bpu14I	TTCGAA	3 cut(s)	303, 692, 3719
BpuEI	CTTGAG	3 cut(s)	2952, 3144, 3298
BpuMI	CCSGG	2 cut(s)	563, 1347
BsaAI	YACGTR	2 cut(s)	2289, 5060
BsaBI	GATNNNNATC	1 cut(s)	471
BsaI	GGTCTC	1 cut(s)	3808
BsaWI	WCCGGW	4 cut(s)	975, 3100, 4510, 5178
Bse118I	RCCGGY	1 cut(s)	714
Bse3DI	GCAATG	4 cut(s)	1966, 3378, 5314, 5338
Bse8I	GATNNNNATC	1 cut(s)	471
BseAI	TCCGGA	1 cut(s)	3100
BseBI	CCWGG	2 cut(s)	1778, 3786
BseJI	GATNNNNATC	1 cut(s)	471
BseMI	GCAATG	4 cut(s)	1966, 3378, 5314, 5338
BseMII	CTCAG	7 cut(s)	26, 961, 1210, 3197, 3237, 4254, 4376
BseRI	GAGGAG	9 cut(s)	167, 343, 745, 1313, 2803, 3879, 4531, 5503, 6026
BseSI	GKGCMC	2 cut(s)	577, 4469
BseYI	CCCAGC	1 cut(s)	3757
BsgI	GTGCAG	6 cut(s)	636, 1203, 2061, 3316, 5515, 5928
Bsh1236I	CGCG	2 cut(s)	645, 1053
Bsh1285I	CGRYCG	1 cut(s)	475
BshNI	GGYRCC	6 cut(s)	2282, 2387, 2414, 3650, 4201, 4429
BsiEI	CGRYCG	1 cut(s)	475
BsiHKAI	GWGCWC	5 cut(s)	613, 1688, 3060, 4469, 5253
BsiHKCI	CYCGRG	1 cut(s)	360
BslFI	GGGAC	7 cut(s)	1621, 2833, 3105, 3494, 3590, 4643, 5481
BsmBI	CGTCTC	1 cut(s)	355
BsmFI	GGGAC	7 cut(s)	1621, 2833, 3105, 3494, 3590, 4643, 5481
BsmI	GAATGC	5 cut(s)	1219, 2356, 4102, 4168, 5607
Bso31I	GGTCTC	1 cut(s)	3808
BsoBI	CYCGRG	1 cut(s)	360
Bsp119I	TTCGAA	3 cut(s)	303, 692, 3719
Bsp120I	GGGCCC	1 cut(s)	573
Bsp1286I	GDGCHC	7 cut(s)	577, 613, 1688, 1941, 3060, 4469, 5253
Bsp13I	TCCGGA	1 cut(s)	3100
Bsp1407I	TGTACA	4 cut(s)	2141, 3077, 4935, 4971
Bsp1720I	GCTNAGC	1 cut(s)	3246
Bsp19I	CCATGG	3 cut(s)	2035, 4036, 4817
Bsp68I	TCGCGA	2 cut(s)	645, 1053
BspCNI	CTCAG	7 cut(s)	25, 960, 1209, 3196, 3238, 4255, 4375
BspEI	TCCGGA	1 cut(s)	3100
BspFNI	CGCG	2 cut(s)	645, 1053
BspHI	TCATGA	2 cut(s)	4143, 6149
BspMAI	CTGCAG	6 cut(s)	1600, 2209, 2383, 2851, 3019, 5074
BspMI	ACCTGC	1 cut(s)	2854
BspOI	GCTAGC	1 cut(s)	3156
BspT104I	TTCGAA	3 cut(s)	303, 692, 3719
BspT107I	GGYRCC	6 cut(s)	2282, 2387, 2414, 3650, 4201, 4429
BspTI	CTTAAG	3 cut(s)	1472, 1787, 5705
BspTNI	GGTCTC	1 cut(s)	3808
BsrDI	GCAATG	4 cut(s)	1966, 3378, 5314, 5338
BsrFI	RCCGGY	1 cut(s)	714
BsrGI	TGTACA	4 cut(s)	2141, 3077, 4935, 4971
BssAI	RCCGGY	1 cut(s)	714
BssSI	CACGAG	3 cut(s)	612, 3771, 5790
BssT1I	CCWWGG	8 cut(s)	2035, 2879, 3061, 4036, 4335, 4590, 4817, 5895
Bst2BI	CACGAG	3 cut(s)	612, 3771, 5790
Bst2UI	CCWGG	2 cut(s)	1778, 3786
BstAFI	CTTAAG	3 cut(s)	1472, 1787, 5705
BstAPI	GCANNNNNTGC	2 cut(s)	2387, 2621
BstAUI	TGTACA	4 cut(s)	2141, 3077, 4935, 4971
BstBAI	YACGTR	2 cut(s)	2289, 5060
BstBI	TTCGAA	3 cut(s)	303, 692, 3719
BstDSI	CCRYGG	5 cut(s)	579, 1562, 2035, 4036, 4817
BstEII	GGTNACC	1 cut(s)	5336
BstFNI	CGCG	2 cut(s)	645, 1053
BstH2I	RGCGCY	2 cut(s)	382, 528
BstHHI	GCGC	3 cut(s)	381, 527, 4566
BstMCI	CGRYCG	1 cut(s)	475
BstMWI	GCNNNNNNNGC	9 cut(s)	2204, 2387, 2612, 2621, 3014, 3026, 5060, 5069, 5757
BstNI	CCWGG	2 cut(s)	1778, 3786
BstNSI	RCATGY	3 cut(s)	3907, 5112, 5666
BstPI	GGTNACC	1 cut(s)	5336
BstSCI	CCNGG	4 cut(s)	561, 1345, 1776, 3784
BstSFI	CTRYAG	8 cut(s)	1596, 1761, 1950, 2205, 2379, 2847, 3015, 5070
BstSLI	GKGCMC	2 cut(s)	577, 4469
BstUI	CGCG	2 cut(s)	645, 1053
BstV2I	GAAGAC	4 cut(s)	1458, 2255, 3827, 6143
BstX2I	RGATCY	8 cut(s)	4, 2423, 4103, 4291, 4530, 5191, 5266, 5276
BstYI	RGATCY	8 cut(s)	4, 2423, 4103, 4291, 4530, 5191, 5266, 5276
BsuI	GTATCC	6 cut(s)	27, 1025, 2569, 2809, 3097, 4921
BtgI	CCRYGG	5 cut(s)	579, 1562, 2035, 4036, 4817
BtgZI	GCGATG	1 cut(s)	5970
BtsI	GCAGTG	1 cut(s)	5079
BtuMI	TCGCGA	2 cut(s)	645, 1053
BveI	ACCTGC	1 cut(s)	2854
CaiI	CAGNNNCTG	7 cut(s)	887, 1850, 3740, 4019, 4106, 4262, 5930
CciI	TCATGA	2 cut(s)	4143, 6149
CfoI	GCGC	3 cut(s)	381, 527, 4566
Cfr10I	RCCGGY	1 cut(s)	714
CseI	GACGC	2 cut(s)	648, 3372
CspCI	CAANNNNNGTGG	4 cut(s)	1272, 1307, 4756, 4791
DraI	TTTAAA	3 cut(s)	1108, 4626, 5004
DrdI	GACNNNNNNGTC	2 cut(s)	347, 4511
DriI	GACNNNNNGTC	1 cut(s)	5233
DseDI	GACNNNNNNGTC	2 cut(s)	347, 4511
EaeI	YGGCCR	3 cut(s)	712, 2032, 5412
Eam1105I	GACNNNNNGTC	1 cut(s)	5233
Eco130I	CCWWGG	8 cut(s)	2035, 2879, 3061, 4036, 4335, 4590, 4817, 5895
Eco24I	GRGCYC	2 cut(s)	577, 1941
Eco31I	GGTCTC	1 cut(s)	3808
Eco32I	GATATC	2 cut(s)	1336, 5902
Eco47I	GGWCC	4 cut(s)	1279, 2843, 3577, 4513
Eco47III	AGCGCT	1 cut(s)	526
Eco57I	CTGAAG	4 cut(s)	2618, 2795, 3276, 4056
Eco72I	CACGTG	2 cut(s)	2289, 5060
Eco88I	CYCGRG	1 cut(s)	360
Eco91I	GGTNACC	1 cut(s)	5336
EcoO109I	RGGNCCY	4 cut(s)	574, 1279, 2520, 5795
EcoO65I	GGTNACC	1 cut(s)	5336
EcoRI	GAATTC	4 cut(s)	694, 1081, 1114, 4300
EcoRII	CCWGG	2 cut(s)	1776, 3784
EcoRV	GATATC	2 cut(s)	1336, 5902
EcoT14I	CCWWGG	8 cut(s)	2035, 2879, 3061, 4036, 4335, 4590, 4817, 5895
EcoT22I	ATGCAT	3 cut(s)	2004, 3625, 5114
EcoT38I	GRGCYC	2 cut(s)	577, 1941
ErhI	CCWWGG	8 cut(s)	2035, 2879, 3061, 4036, 4335, 4590, 4817, 5895
Esp3I	CGTCTC	1 cut(s)	355
FalI	AAGNNNNNCTT	8 cut(s)	25, 57, 3892, 3924, 4846, 4878, 5688, 5720
FaqI	GGGAC	7 cut(s)	1621, 2833, 3105, 3494, 3590, 4643, 5481
FauI	CCCGC	3 cut(s)	258, 264, 4917
FauNDI	CATATG	1 cut(s)	4672
FbaI	TGATCA	1 cut(s)	1744
FblI	GTMKAC	1 cut(s)	2858
FriOI	GRGCYC	2 cut(s)	577, 1941
GlaI	GCGC	3 cut(s)	380, 526, 4565
GsaI	CCCAGC	1 cut(s)	3761
GsuI	CTGGAG	7 cut(s)	301, 2377, 3291, 3474, 3996, 4173, 4858
HaeII	RGCGCY	2 cut(s)	382, 528
HgaI	GACGC	2 cut(s)	648, 3372
HhaI	GCGC	3 cut(s)	381, 527, 4566
Hin6I	GCGC	3 cut(s)	379, 525, 4564
HinP1I	GCGC	3 cut(s)	379, 525, 4564
HincII	GTYRAC	2 cut(s)	2749, 4947
HindII	GTYRAC	2 cut(s)	2749, 4947
HindIII	AAGCTT	1 cut(s)	5807
HpaI	GTTAAC	1 cut(s)	2749
Hpy99I	CGWCG	4 cut(s)	217, 425, 590, 6076
HpyCH4IV	ACGT	8 cut(s)	212, 420, 1228, 2288, 3201, 4469, 5059, 5155
HpyF10VI	GCNNNNNNNGC	9 cut(s)	2204, 2387, 2612, 2621, 3014, 3026, 5060, 5069, 5757
HpySE526I	ACGT	8 cut(s)	212, 420, 1228, 2288, 3201, 4469, 5059, 5155
HspAI	GCGC	3 cut(s)	379, 525, 4564
Kpn2I	TCCGGA	1 cut(s)	3100
KpnI	GGTACC	2 cut(s)	2286, 3654
Ksp22I	TGATCA	1 cut(s)	1744
KspAI	GTTAAC	1 cut(s)	2749
MaeII	ACGT	8 cut(s)	212, 420, 1228, 2288, 3201, 4469, 5059, 5155
MfeI	CAATTG	2 cut(s)	3584, 5566
MflI	RGATCY	8 cut(s)	4, 2423, 4103, 4291, 4530, 5191, 5266, 5276
MhlI	GDGCHC	7 cut(s)	577, 613, 1688, 1941, 3060, 4469, 5253
MlsI	TGGCCA	1 cut(s)	2034
MluNI	TGGCCA	1 cut(s)	2034
MlyI	GAGTC	7 cut(s)	2494, 2504, 3305, 4334, 5504, 5572, 5985
MmeI	TCCRAC	9 cut(s)	96, 205, 1117, 1272, 2428, 2550, 2921, 5998, 6054
Mox20I	TGGCCA	1 cut(s)	2034
Mph1103I	ATGCAT	3 cut(s)	2004, 3625, 5114
MroI	TCCGGA	1 cut(s)	3100
MroXI	GAANNNNTTC	4 cut(s)	2187, 3096, 5391, 5700
MscI	TGGCCA	1 cut(s)	2034
MslI	CAYNNNNRTG	7 cut(s)	978, 3063, 3338, 3867, 5100, 5667, 5751
Msp20I	TGGCCA	1 cut(s)	2034
MspA1I	CMGCKG	5 cut(s)	556, 3245, 3757, 4052, 4636
MspCI	CTTAAG	3 cut(s)	1472, 1787, 5705
MspR9I	CCNGG	4 cut(s)	563, 1347, 1778, 3786
MunI	CAATTG	2 cut(s)	3584, 5566
Mva1269I	GAATGC	5 cut(s)	1219, 2356, 4102, 4168, 5607
MvaI	CCWGG	2 cut(s)	1778, 3786
MvnI	CGCG	2 cut(s)	645, 1053
MwoI	GCNNNNNNNGC	9 cut(s)	2204, 2387, 2612, 2621, 3014, 3026, 5060, 5069, 5757
NciI	CCSGG	2 cut(s)	563, 1347
NcoI	CCATGG	3 cut(s)	2035, 4036, 4817
NdeI	CATATG	1 cut(s)	4672
NheI	GCTAGC	1 cut(s)	3152
NmuCI	GTSAC	3 cut(s)	971, 4502, 6059
NruI	TCGCGA	2 cut(s)	645, 1053
NsiI	ATGCAT	3 cut(s)	2004, 3625, 5114
NspI	RCATGY	3 cut(s)	3907, 5112, 5666
NspV	TTCGAA	3 cut(s)	303, 692, 3719
OliI	CACNNNNGTG	2 cut(s)	3063, 5100
PaeI	GCATGC	2 cut(s)	3907, 5112
PagI	TCATGA	2 cut(s)	4143, 6149
PciI	ACATGT	1 cut(s)	5662
PcsI	WCGNNNNNNNCGW	2 cut(s)	345, 391
PctI	GAATGC	5 cut(s)	1219, 2356, 4102, 4168, 5607
PdmI	GAANNNNTTC	4 cut(s)	2187, 3096, 5391, 5700
PflFI	GACNNNGTC	1 cut(s)	2675
PflMI	CCANNNNNTGG	2 cut(s)	1850, 3586
PfoI	TCCNGGA	1 cut(s)	561
Ple19I	CGATCG	1 cut(s)	475
PleI	GAGTC	7 cut(s)	2494, 2504, 3305, 4334, 5504, 5572, 5984
PmaCI	CACGTG	2 cut(s)	2289, 5060
PmlI	CACGTG	2 cut(s)	2289, 5060
PpsI	GAGTC	7 cut(s)	2494, 2504, 3305, 4334, 5504, 5572, 5984
Ppu21I	YACGTR	2 cut(s)	2289, 5060
PpuMI	RGGWCCY	1 cut(s)	1279
PscI	ACATGT	1 cut(s)	5662
PshBI	ATTAAT	1 cut(s)	1737
PsiI	TTATAA	1 cut(s)	594
Psp5II	RGGWCCY	1 cut(s)	1279
Psp6I	CCWGG	2 cut(s)	1776, 3784
PspCI	CACGTG	2 cut(s)	2289, 5060
PspEI	GGTNACC	1 cut(s)	5336
PspFI	CCCAGC	1 cut(s)	3757
PspGI	CCWGG	2 cut(s)	1776, 3784
PspOMI	GGGCCC	1 cut(s)	573
PspPPI	RGGWCCY	1 cut(s)	1279
PsrI	GAACNNNNNNTAC	2 cut(s)	1699, 1731
PstI	CTGCAG	6 cut(s)	1600, 2209, 2383, 2851, 3019, 5074
PstNI	CAGNNNCTG	7 cut(s)	887, 1850, 3740, 4019, 4106, 4262, 5930
PsuI	RGATCY	8 cut(s)	4, 2423, 4103, 4291, 4530, 5191, 5266, 5276
PsyI	GACNNNGTC	1 cut(s)	2675
PvuI	CGATCG	1 cut(s)	475
PvuII	CAGCTG	5 cut(s)	556, 3245, 3757, 4052, 4636
RruI	TCGCGA	2 cut(s)	645, 1053
RseI	CAYNNNNRTG	7 cut(s)	978, 3063, 3338, 3867, 5100, 5667, 5751
ScaI	AGTACT	4 cut(s)	2311, 3919, 4522, 5444
SchI	GAGTC	7 cut(s)	2494, 2504, 3305, 4334, 5504, 5572, 5985
ScrFI	CCNGG	4 cut(s)	563, 1347, 1778, 3786
SduI	GDGCHC	7 cut(s)	577, 613, 1688, 1941, 3060, 4469, 5253
SfcI	CTRYAG	8 cut(s)	1596, 1761, 1950, 2205, 2379, 2847, 3015, 5070
SfuI	TTCGAA	3 cut(s)	303, 692, 3719
SinI	GGWCC	4 cut(s)	1279, 2843, 3577, 4513
SmiMI	CAYNNNNRTG	7 cut(s)	978, 3063, 3338, 3867, 5100, 5667, 5751
SmlI	CTYRAG	6 cut(s)	1472, 1787, 2967, 3159, 3313, 5705
SmoI	CTYRAG	6 cut(s)	1472, 1787, 2967, 3159, 3313, 5705
SpeI	ACTAGT	2 cut(s)	905, 1120
SphI	GCATGC	2 cut(s)	3907, 5112
SspI	AATATT	3 cut(s)	1741, 2329, 5318
StyD4I	CCNGG	4 cut(s)	561, 1345, 1776, 3784
StyI	CCWWGG	8 cut(s)	2035, 2879, 3061, 4036, 4335, 4590, 4817, 5895
TaiI	ACGT	8 cut(s)	215, 423, 1231, 2291, 3204, 4472, 5062, 5158
TaqII	GACCGA	1 cut(s)	3790
TatI	WGTACW	9 cut(s)	2141, 2309, 3077, 3917, 4408, 4520, 4935, 4971, 5442
TauI	GCSGC	2 cut(s)	606, 3008
TseFI	GTSAC	3 cut(s)	971, 4502, 6059
Tsp45I	GTSAC	3 cut(s)	971, 4502, 6059
TspGWI	ACGGA	2 cut(s)	3467, 4873
Tth111I	GACNNNGTC	1 cut(s)	2675
Van91I	CCANNNNNTGG	2 cut(s)	1850, 3586
Vha464I	CTTAAG	3 cut(s)	1472, 1787, 5705
VneI	GTGCAC	1 cut(s)	4465
VpaK11BI	GGWCC	4 cut(s)	1279, 2843, 3577, 4513
VspI	ATTAAT	1 cut(s)	1737
XceI	RCATGY	3 cut(s)	3907, 5112, 5666
XcmI	CCANNNNNNNNNTGG	3 cut(s)	2809, 3661, 5422
XmiI	GTMKAC	1 cut(s)	2858
XmnI	GAANNNNTTC	4 cut(s)	2187, 3096, 5391, 5700
ZrmI	AGTACT	4 cut(s)	2311, 3919, 4522, 5444
Zsp2I	ATGCAT	3 cut(s)	2004, 3625, 5114

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.