Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0001752

Physical Location & Seq

Genomic Coordinates Reverse (-)

40703640 .. 40712721

Gene Structure 9082 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G489000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 6315 bp

ATGGACCTGCCTCAGTACCTTCACCACCACCCAAGGTACGCTACTTCTAATCCCTACCCAGCCGACCCCCCGAATCTCCCAAACTATCCTCACCGCCACCACAACAACCACCACTACAACCACCACCACCACCAGCAACCACCACCACAAATCCAACCACCGCCGCCTCCACCGCCACCACTACCCCCAACGTCGTCATATCACCCCCTGCCTCCACCTCCACCACCGCCGCCCCATCCCTACAACCCCAGCCAGCCCCAATTGCCCTTTGAATCCGAACATTCTAGAACCTTTCATTCTCTTCACGACTTCCCTGTCTCCTCGCCCCGTGTCTCCAGCCGAGTCACTCTCGATGCCGAGCGCCATCGCCATCATCGATTGCCCCAATTTGATCTTCCCTACCTCGAAAAGAATCCCGATTCTTGGGACCCTTCGAGGGCTTATCTTGATTTTGAGCGTGATCGTGAATTGCTTAAACCCCAGTTTAGGCTTGAATCAGAGGGCAGTGGTAGTGCTAGGTTTAGAGGCGAGTACAATGAACAACTGCTCCGGGATCAGCGGGCGGGCGACGATGAGTATAATAATCGTCGCCGAGCTCGTGTAGAACCCAATTCTGAAATTGCTTATCGCGAATTGGGGTTTGTGTCGAATCAAAATTCGAATAATTTGGATTCGAATAATTTGGATTTTGATTCGAAATCCGGAGGTTACGATGGCAGGTATGATGAGTTGATGAGGAGTGGTGGTGGTAGGAGGGATGAAGTGTATGAGAATACTCAGAGATGGGTTCATCATGACAGACAAGCTAGTAGAGAGTTATATGATCCGTTCGAGGTTGATGAGACTAATGGAGGTCGGAATGTTTCAGGGAATCGGGAGTATTATGGTTCGGAAACAGGAAGAGGTAGTAGTAATAATAGGAGGAAGCAGATTCAGAAGAAGAGTGCTTTGCTCCGGCTGCAAATGGCGAAACCTAGTCACAAGCATTACTCTGCTTATTTTGATAATTCTGGCTCTAGTTCCCACAGAGGGAAAGGACATTATGAGTATTCGGATCGTGAGATGGATGAAGAAGAGAGAGGTGGGAGCCCTTTGGAACTTGATGTATCATTTAAATCGAATTCCCTAGTGGCGAAGACTGTTGGGAATAGGAATTTTAAGAGAGATTCAGTGTTTGACAGGGATTTTTCAAATTCGCAACTTACTAAACTCAGTGAGGATGCTGTACATTTGGATAGGTCTGTAGTTGTTGAGGATATGACATCCAATTCAGACAAGGACCCGCGACTGTTGGAAGAGGAAGTGACTACTTCTGGTGTTGAGAGTAGGTGTGATATCGATTCACAGCCGTGTTCTAATGTGACTGATGATTCGTTTGGAAAGAGTGAAGTGGAAAGGGCTTCAAAAAGCAAGGTTTTACAAAGAGATGGTAAAAGTGCTGGTTCTAGTCAAATGCCCTCTCACAAGGTTTCTAAGAAGAAAAAAGTGGCAAAGAAAGTAGTGAAAAAGATCATAAATCCTCAACCACTGCCAAAACATAAGATTGATGAACCTGGGGTAGCAGATAGCTTTATTTGTAGACCATCTGCAGCCTTTGGGGCTGACAAGGACGAAACCTCTTCTTTTGCTGATCCTTGTTCAAACGATGTGCATGCATTGCCTGTAAATAAAAAAGTAGATGGCTCTTCCCTGAACATGTTATCAGATGAGCATGGCACTGAATCCAACTCTTGTAGTAAGAGTACTGGGAGCAACTCAACTTCAAAATTGGGTTCTTCGAATCATGAAGAATTTAACATTGATCAGGGTCCTCTGACTGTAGATACTTCTGTCCAGGGCTTGCTTAAGATTTCAAATTTTAGCAACAATGTAACTGATTCACTTAGGGTAGCTAGTTGTCCTGAAACTGATGGTGTTATAGATGTCAGCAAACAGATTTGTCACAGTGGTAACAGTTTATCGCTTGATAATGTCATTCGAAAAGAATCATCAGAGGCCATGCTGTCTGTAGAAGGCAATGCCAATTCTGGTTTTTTAAGTTCAGAGAAAATTATGATGCATGACGACATTATGAATGCAAATGGTTCAGGCCATGGTACAGAAACCACCTTGGATATTGAGAGTGGGAGAAATGTGTTGCATCAGGAAATAATTGTTCACGACATTGGCACTGTGGATGCCATCAATGAGAAAGTTTGTAAATATCAGTTCCCCACATCACTTCAAATTGGTTTTGTGGAAGAACTTCCAAAGGGTATATCTTCAGCAGAAAGCAGCATGACTGTTGGTTTGTCAAGTTCGGGGGAGACCTTAGCTGTTTGCTCCAATTCTGGTAGAGGTACCACCTGGGATTCTGACAAAGTTTGTACTAATTATGATGAGAATATTATTGGTAAGCAACCATCTGCAGATGGTGCCTCTAGATCATTTGGAATTTGTGCCACACAAAGATCTCCAGATATTACAAAGTCAGTTGGAGATAGTAAGAGTGTTACTCATAAGAATAAAAAGAAGAGAAAAGTTAGGACTCGGTTAGACTCGTCAAGGGCTTCCAACACTTGTGCAGAGCCTATAAATGTTTCCGTCAACAAAAATTCTGTGGATACAACAGTAAGTTCATCCCTGAAGGATGCTAGTCATGCAGAAGTTTCTGTTTTTGGTGTTGGAAAGTTAGATATTGGCTCACAACCTGTTAATGATGGGGTAAGTGTTATTCATGGGAAAAGCTCAGTAGATGGGTTTTGTGAGGCTAAGTTATCAACTAGAAGTGATGTTAACTGTGATCCCAATGAGACTTCACCGAAGTATATAAAGAAGAGAAAGTTATCTGCCTCTCATTTAGTATTGACTACATCTCAAACCAATGATGGACCTGCAGATAAATCTACATTTTATACAGAATCTACAGATGCACCTTTGAAGTCTAATGGTAATCCAACACAAGAAGAAGACGAAGTTGCTGCTTCCAGCACAGGTCGTCTCCTTGCTACTGCTAATTTAATGCCTTCTCAAGAAGGAAGCACTGTATTTCTCAAGGATAATTTAGCAGGAGTATTATCTGATGCTGTAGCTGCAGCTAGGGATGCCTTTACTAATGATGGTATGAAGTCTGAGCACCAAGGTGTGGACTCCTGTTCAATTTATGAAGAGTCAGTTCCAGATACACTATTCCTTTGTCCATCACAATTGAGAAATGAGCAGAAAGAGGCAGGTACTCAAGTTATGGTCATAAATAATCATCACCTTGACATTATGGACATAGAAAGCAATCGTGAAGAAAATTTTGATATAGTTGCAACAGACGAGCAAGTTATTATACACGGTGAGACTGCTTTATGCAGAGTTTCTTCAGAAGTCGAGCCTCCAGAGTTAGGTTATAAATTTTCCTGCACAGATATGGAATCAGATCACGTCTCTGTGAAAGATTCATTGCCGTTTGCTTCAAATCGTCTGCTGTTGTGCGCCAATGACAATGAAGTATCCACCACTAACTCTAATGAAGGGGTGGAGTCTGTGCCTGATACACTATCAGATACAGGTTCTCCAGAAACTTCAACTGATGTCCCTGGCGTGCAGATGCGAACTTGTAGTCCATCAGTTATTAAAATTTCTGATGGAAAAGATTGTGGGGATGACCAGAAATTAGGTTTGAAGTCTGTGGTTGAAGTTGGTTGCAGTGCATCTGCTCGAAATTCATTATCAGAGTGTACCAAATCTAATTTAACATCACATCCTGTAACTGAAGGTGGTCAATCAGTCATGGGGAAGACAGTAGCTTTGCCATTGCAGGATATCAAAAAGACAGCTCATGGTTTGAATCTCGTAACTGCTGAATCTCGGGTGAAGAATCAGTTGGGTCAAGCTACTCGTAGGATTGTTCCAGGTCATTCATATTCTGTGTTTTCTACCTCAAAGAAGACTGGCTCGTCAACTCATATGGCAAAACCTCGGACTTGGCATCGAAATGGTAATGCATCTGCATCTTCTCTTCCTGCAAGTATGCCTTTCTCGAGTACTGTTCCACCCCAAAGGAATTTACCACAAAAAGATGGAAAACTTCAGAGTAATTCTTATGTGCGTAAAGGCAACAGCCTTGTTAGAAAACCAGTTCCAGTTGCTGCTCTACCTCAAAGCTCTCATGGGTTTAGCTCAGCTGTTTATCGGTTGAACTCTTTAGGTATAGATGGGTTGAAGAAGAATGCAGGATCTGAAAGTAGGGTTGATGTTAAAAACCCTCCAAGTCTCATGAGAACGGGAGAAATGAATGCTCCTTTTGATAGGCCCAGACCCCCGTTGCCCAATGGAGCCAAATTATCTACTTGTGATGCCATCTCTTTGGGGGTTTGTACATCATCCCAATTGGCTGAGCCACTTCTTAGTGGTGAAAATATGTCAGATCCTATGAATTGTTTGGAAACTAAAGATGCAAAAATTGTTGTCAATGACTCACTGGTAACTTCTGAAACTCAGGAAAATCATAGTGGTCCATTCAACAGTTTGGAAAACCAGACGGAACTACATGATGGAAATTCGGCGCCTTCAAATACGAAGAATATTGTCTATGTAAAGCACAAGTTAAATCAGTTGGTTGCATCTTCCAGTCCTTGTGACCTTCCCGTCCACAATACTGATAAGATCCAACACTCATCCTTTGACGGCTACTACAAGAGGCGCAAAAATCAGCTAATTAGGACATCTTCAGAAGGTCATGCTAAACAGGCAGTTATCACGTCCAATGACAATTTAAACTCACAGGTGCAAAAGGTTTCTAAGATTGTCCCCAGCAGAATATATGGCAAGAAGCGATCACAAAAGGTTATTGCAAAGACAAGTAAAACTGGAAAACACTCTTTGGTGTGGACGCCACGTGGTACACAGTCATCGAACAATGATGGTGATTCATTTGACCATCAGAAGGTATTGCCTCACCTGTTTCCTTGGAAAAGAGCAAGACACTGGAGGACTTCCATGCAAAGTCAGGCTTCCAACTTCAAATATAGTTCCGCATCAACAATCAGTAAAAAACTGCTGCTGTCAAGAAGGCGGGATACTGTATACACTAGGTCAACCCATGGATTTTCACTTAGAATGTACAAAGTATTAAGTGTTGGTGGGTCCAGTTTAAAATGGTCAAAATCCATTGAAAATCGCTCAAAGAAAGCTAATGAGGAAGCTACACGTGCTGTTGCTGCAGTAGAGAAGAAGAAAAGAGAACACAGTGGTGCTGCTTGCGTTAGTTCTGGGTCTAAATTTAGAAATAATATATCGGGAAAACGTATATTCCGCATTGGTTCTGTCCGTTACAAAATGGATCCTTCAAGGCGAACACTTCAGAGAATTTCAGCAAATTTGTCATACAGTCTTCACTCATGCTGTGTAGATGACGAATCATCAAGCTCTGCTGTGCTCAATCCAGAAAAGGATGCCAAGAGATCTTATGTTCCAAGGAGATTGGTGATCGGCAATGATGAATATGTGCGGATTGGCAATGGTAATCAGCTTATCAGAAATCCGAAGAAACGAACTCGCATATTGGCTAGTGAAAGAGTTCGATGGAGTTTGCACACTGCCAGACTGCGGTTGGCAAAAAAGCGGAAGTACTGTCAGTTTTTTACGAGATTTGGGAAGTGCAACAAGGATGATGGAAAATGCCCCTATATTCATGATCCCTCTAAAATTGCAGTCTGCACAAAGTTTCTGAAGGGGTTGTGTTCCAATCCCAACTGCAAGTTGACTCATAAGGTCATTCCAGAAAGAATGCAGGACTGTTCTTACTTTTTGCAAGGTTTGTGCTCCAATGAAAATTGTCCTTACAGACATGTAAATGTGAATCCAAAGGCATCTACTTGTGAAGGATTTCTTAAGGGATATTGTGCTGACGGGAATGAGTGCCGGAAGAAGCACAGCTATGTCTGCCCGTCTTTTGAAGCAACTGGAACCTGTCCTCAAGGTCCTAAATGCAAGCTTCACCACCCCAGAAACCGAACAAAGGGAAAGAAAAGGAAACGAACAAGAGAACAAAAAAATGCTTGGGGCCGTTACTTTGTATCCAAGGATATCAATTTTTCTGAGCCGAGAGCAGTGTCTGGAAAGCACTGTGCACAAAATGGTGATGACATATTTGATGATGGAAGGGCTGCTGATTTCATTAGCATTGATGCTAGTGATGAGGAGGCCGGAGAAAGCAACGATCCAATAAACGAGCAAGCTGCATCGTGCGACAGTGATTCCTCTGAATTAGAATTAGATGATCTTGATGAGCTAATTAAACCGGTTCGTTTACTGGATAGGAGTCCGAAGACAAACATCTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005847 GO:0005849 GO:0006139 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0015031 GO:0015833 GO:0015931 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0016973 GO:0031123 GO:0031124 GO:0031503 GO:0031974 GO:0031981 GO:0032991 GO:0033036 GO:0034613 GO:0034641 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045184 GO:0046483 GO:0046907 GO:0050657 GO:0050658 GO:0051028 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0098787 GO:0098789 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

2105

Amino Acids

232.05

Weight (kDa)

8.52

Isoelectric Point (pI)

46.2

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0001752)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21580 AT1G21580 AT1G21580 AT1G21580 AT1G21580 AT1G21580 AT1G21580 AT1G21580 AT1G21580
fragaria_vesca	FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950
malus_domestica	MD08G1160000.v1.1 MD08G1160100.v1.1 MD08G1160200.v1.1 MD15G1133400.v1.1
prunus_persica	Prupe.1G489000_v2.0.a1 Prupe.1G489000_v2.0.a1 Prupe.1G489000_v2.0.a1
pyrus_communis	pycom08g13490 pycom08g13510
rosa_chinensis	RchiOBHm_Chr6g0296771
rosa_laevigata	RLG00000011660 RLG00000013665
rosa_multiflora	Rmu_ssc0000192.1_g000011
rosa_rugosa	Rorug06G0265800 Rorug06G0265800 Rorug06G0265900 Rorug06G0266000
rosa_samantha	Rh6AG376900 Rh6AG377000 Rh6BG385300 Rh6CG390500 Rh6DG377600
rosa_wichuraiana	Rw6G032950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	3378
AasI	GACNNNNNNGTC	3 cut(s)	314, 3925, 4616
Acc36I	ACCTGC	4 cut(s)	15, 708, 2881, 3200
Acc65I	GGTACC	1 cut(s)	2339
AccB1I	GGYRCC	3 cut(s)	2339, 2414, 4534
AccB7I	CCANNNNNTGG	1 cut(s)	3124
AccI	GTMKAC	2 cut(s)	1579, 5055
AccII	CGCG	2 cut(s)	630, 1285
AccIII	TCCGGA	1 cut(s)	701
AcuI	CTGAAG	8 cut(s)	2247, 2645, 3333, 3762, 4043, 4683, 5315, 5720
AcvI	CACGTG	2 cut(s)	4868, 5180
AcyI	GRCGYC	2 cut(s)	4535, 4862
AfiI	CCNNNNNNNGG	9 cut(s)	423, 436, 486, 1029, 3124, 3371, 4915, 5577, 5989
AflII	CTTAAG	2 cut(s)	1844, 5861
AflIII	ACRYGT	3 cut(s)	1695, 5177, 5818
AgeI	ACCGGT	1 cut(s)	6271
AjiI	CACGTC	2 cut(s)	3412, 4731
AjnI	CCWGG	5 cut(s)	1552, 1833, 2345, 3565, 3880
AjuI	GAANNNNNNNTTGG	4 cut(s)	378, 410, 3836, 3868
AleI	CACNNNNGTG	3 cut(s)	1348, 3120, 5220
AloI	GAACNNNNNNTCC	4 cut(s)	531, 563, 3574, 3606
Alw21I	GWGCWC	5 cut(s)	598, 3117, 5409, 5795, 6103
Alw26I	GTCTC	9 cut(s)	322, 337, 836, 2300, 2786, 2984, 3320, 3418, 4247
Alw44I	GTGCAC	1 cut(s)	6099
AlwNI	CAGNNNCTG	3 cut(s)	4118, 4208, 6086
Ama87I	CYCGRG	2 cut(s)	3837, 4009
Aor13HI	TCCGGA	1 cut(s)	701
AoxI	GGCC	5 cut(s)	1995, 2089, 4280, 6034, 6174
ApaLI	GTGCAC	1 cut(s)	6099
ArsI	GACNNNNNNTTYG	8 cut(s)	1354, 1386, 2272, 2304, 3574, 3606, 3760, 3792
AsiGI	ACCGGT	1 cut(s)	6271
Asp700I	GAANNNNTTC	3 cut(s)	2244, 5547, 5856
Asp718I	GGTACC	1 cut(s)	2339
AspLEI	GCGC	4 cut(s)	363, 3464, 4537, 4674
AsuC2I	CCSGG	1 cut(s)	551
AsuII	TTCGAA	5 cut(s)	659, 674, 695, 1778, 1978
AvaI	CYCGRG	2 cut(s)	3837, 4009
AvaII	GGWCC	8 cut(s)	4, 427, 1279, 1808, 2870, 4484, 5115, 5951
BaeGI	GKGCMC	1 cut(s)	6103
BaeI	ACNNNNGTAYC	6 cut(s)	1815, 1848, 2595, 2628, 3204, 3237
BamHI	GGATCC	1 cut(s)	5311
BanI	GGYRCC	3 cut(s)	2339, 2414, 4534
BanII	GRGCYC	2 cut(s)	598, 1091
BarI	GAAGNNNNNNTAC	2 cut(s)	5032, 5064
BauI	CACGAG	1 cut(s)	597
BbrPI	CACGTG	2 cut(s)	4868, 5180
BbsI	GAAGAC	6 cut(s)	1142, 2955, 3773, 3923, 5354, 6305
Bbv12I	GWGCWC	5 cut(s)	598, 3117, 5409, 5795, 6103
BceAI	ACGGC	4 cut(s)	1333, 3418, 4672, 6021
BcgI	CGANNNNNNTGC	6 cut(s)	1634, 1668, 2942, 2976, 6191, 6225
BciT130I	CCWGG	5 cut(s)	1554, 1835, 2347, 3567, 3882
BciVI	GTATCC	4 cut(s)	2596, 3490, 5041, 6058
BclI	TGATCA	1 cut(s)	1801
BcnI	CCSGG	1 cut(s)	551
BcoDI	GTCTC	9 cut(s)	322, 337, 836, 2300, 2786, 2984, 3320, 3418, 4247
BfoI	RGCGCY	2 cut(s)	364, 4538
BfrI	CTTAAG	2 cut(s)	1844, 5861
BfuAI	ACCTGC	4 cut(s)	15, 708, 2881, 3200
BfuI	GTATCC	4 cut(s)	2596, 3490, 5041, 6058
BglI	GCCNNNNNGGC	1 cut(s)	1598
BglII	AGATCT	2 cut(s)	2450, 5432
BlpI	GCTNAGC	2 cut(s)	4150, 4365
BmcAI	AGTACT	3 cut(s)	1744, 4015, 5600
Bme1390I	CCNGG	6 cut(s)	551, 1554, 1835, 2347, 3567, 3882
Bme18I	GGWCC	8 cut(s)	4, 427, 1279, 1808, 2870, 4484, 5115, 5951
BmeT110I	CYCGRG	2 cut(s)	3837, 4009
BmgBI	CACGTC	2 cut(s)	3412, 4731
BmrFI	CCNGG	6 cut(s)	551, 1554, 1835, 2347, 3567, 3882
BmrI	ACTGGG	2 cut(s)	475, 1755
BmuI	ACTGGG	2 cut(s)	475, 1755
BpiI	GAAGAC	6 cut(s)	1142, 2955, 3773, 3923, 5354, 6305
BplI	GAGNNNNNCTC	4 cut(s)	333, 365, 2479, 2511
BpmI	CTGGAG	5 cut(s)	319, 2439, 3348, 3528, 4978
Bpu10I	CCTNAGC	1 cut(s)	2311
Bpu1102I	GCTNAGC	2 cut(s)	4150, 4365
Bpu14I	TTCGAA	5 cut(s)	659, 674, 695, 1778, 1978
BpuEI	CTTGAG	4 cut(s)	2994, 3017, 3201, 5931
BpuMI	CCSGG	1 cut(s)	551
Bsa29I	ATCGAT	2 cut(s)	376, 1338
BsaAI	YACGTR	2 cut(s)	4868, 5180
BsaHI	GRCGYC	2 cut(s)	4535, 4862
BsaI	GGTCTC	1 cut(s)	2300
BsaWI	WCCGGW	2 cut(s)	701, 6271
BsaXI	ACNNNNNCTCC	6 cut(s)	531, 561, 730, 760, 3526, 3556
Bsc4I	CCNNNNNNNGG	9 cut(s)	423, 436, 486, 1029, 3124, 3371, 4915, 5577, 5989
Bse118I	RCCGGY	1 cut(s)	6271
Bse3DI	GCAATG	6 cut(s)	1655, 2023, 3428, 3782, 5470, 5494
BseAI	TCCGGA	1 cut(s)	701
BseBI	CCWGG	5 cut(s)	1554, 1835, 2347, 3567, 3882
BseCI	ATCGAT	2 cut(s)	376, 1338
BseLI	CCNNNNNNNGG	9 cut(s)	423, 436, 486, 1029, 3124, 3371, 4915, 5577, 5989
BseMI	GCAATG	6 cut(s)	1655, 2023, 3428, 3782, 5470, 5494
BseMII	CTCAG	9 cut(s)	26, 791, 1225, 2742, 3102, 4164, 4356, 4481, 6060
BseRI	GAGGAG	3 cut(s)	310, 751, 6185
BseSI	GKGCMC	1 cut(s)	6103
BseYI	CCCAGC	3 cut(s)	58, 248, 4781
BsgI	GTGCAG	4 cut(s)	2583, 3373, 3593, 5671
Bsh1236I	CGCG	2 cut(s)	630, 1285
BshFI	GGCC	5 cut(s)	1997, 2091, 4282, 6036, 6176
BshNI	GGYRCC	3 cut(s)	2339, 2414, 4534
BshTI	ACCGGT	1 cut(s)	6271
BshVI	ATCGAT	2 cut(s)	376, 1338
BsiHKAI	GWGCWC	5 cut(s)	598, 3117, 5409, 5795, 6103
BsiHKCI	CYCGRG	2 cut(s)	3837, 4009
BsiSI	CCGG	6 cut(s)	550, 702, 955, 5893, 6177, 6272
BslFI	GGGAC	3 cut(s)	440, 3548, 4763
BslI	CCNNNNNNNGG	9 cut(s)	423, 436, 486, 1029, 3124, 3371, 4915, 5577, 5989
BsmAI	GTCTC	9 cut(s)	322, 337, 836, 2300, 2786, 2984, 3320, 3418, 4247
BsmBI	CGTCTC	2 cut(s)	2984, 3418
BsmFI	GGGAC	3 cut(s)	440, 3548, 4763
BsmI	GAATGC	4 cut(s)	2080, 4204, 4270, 5763
BsnI	GGCC	5 cut(s)	1997, 2091, 4282, 6036, 6176
Bso31I	GGTCTC	1 cut(s)	2300
BsoBI	CYCGRG	2 cut(s)	3837, 4009
Bsp119I	TTCGAA	5 cut(s)	659, 674, 695, 1778, 1978
Bsp1286I	GDGCHC	6 cut(s)	598, 1091, 3117, 5409, 5795, 6103
Bsp13I	TCCGGA	1 cut(s)	701
Bsp1407I	TGTACA	3 cut(s)	1225, 4346, 5091
Bsp1720I	GCTNAGC	2 cut(s)	4150, 4365
Bsp19I	CCATGG	2 cut(s)	2092, 5071
Bsp68I	TCGCGA	1 cut(s)	630
BspANI	GGCC	5 cut(s)	1997, 2091, 4282, 6036, 6176
BspCNI	CTCAG	9 cut(s)	25, 790, 1224, 2741, 3103, 4163, 4357, 4480, 6061
BspDI	ATCGAT	2 cut(s)	376, 1338
BspEI	TCCGGA	1 cut(s)	701
BspFNI	CGCG	2 cut(s)	630, 1285
BspHI	TCATGA	4 cut(s)	793, 1783, 4245, 5662
BspMAI	CTGCAG	5 cut(s)	1591, 2410, 2878, 3076, 5194
BspMI	ACCTGC	4 cut(s)	15, 708, 2881, 3200
BspQI	GCTCTTC	1 cut(s)	1690
BspT104I	TTCGAA	5 cut(s)	659, 674, 695, 1778, 1978
BspT107I	GGYRCC	3 cut(s)	2339, 2414, 4534
BspTI	CTTAAG	2 cut(s)	1844, 5861
BspTNI	GGTCTC	1 cut(s)	2300
BsrDI	GCAATG	6 cut(s)	1655, 2023, 3428, 3782, 5470, 5494
BsrFI	RCCGGY	1 cut(s)	6271
BsrGI	TGTACA	3 cut(s)	1225, 4346, 5091
BssAI	RCCGGY	1 cut(s)	6271
BssNAI	GTATAC	1 cut(s)	5056
BssNI	GRCGYC	2 cut(s)	4535, 4862
BssSI	CACGAG	1 cut(s)	597
BssT1I	CCWWGG	8 cut(s)	32, 2092, 2109, 3118, 4937, 5071, 5444, 6051
Bst1107I	GTATAC	1 cut(s)	5056
Bst2BI	CACGAG	1 cut(s)	597
Bst2UI	CCWGG	5 cut(s)	1554, 1835, 2347, 3567, 3882
BstACI	GRCGYC	2 cut(s)	4535, 4862
BstAFI	CTTAAG	2 cut(s)	1844, 5861
BstAPI	GCANNNNNTGC	2 cut(s)	1657, 2414
BstAUI	TGTACA	3 cut(s)	1225, 4346, 5091
BstBAI	YACGTR	2 cut(s)	4868, 5180
BstBI	TTCGAA	5 cut(s)	659, 674, 695, 1778, 1978
BstC8I	GCNNGC	9 cut(s)	254, 561, 565, 1653, 1841, 3572, 5230, 5963, 6207
BstDSI	CCRYGG	2 cut(s)	2092, 5071
BstFNI	CGCG	2 cut(s)	630, 1285
BstH2I	RGCGCY	2 cut(s)	364, 4538
BstHHI	GCGC	4 cut(s)	363, 3464, 4537, 4674
BstMAI	GTCTC	9 cut(s)	322, 337, 836, 2300, 2786, 2984, 3320, 3418, 4247
BstNI	CCWGG	5 cut(s)	1554, 1835, 2347, 3567, 3882
BstNSI	RCATGY	3 cut(s)	1655, 1699, 5822
BstSCI	CCNGG	6 cut(s)	549, 1552, 1833, 2345, 3565, 3880
BstSLI	GKGCMC	1 cut(s)	6103
BstUI	CGCG	2 cut(s)	630, 1285
BstV2I	GAAGAC	6 cut(s)	1142, 2955, 3773, 3923, 5354, 6305
BstX2I	RGATCY	6 cut(s)	2450, 4205, 4396, 4635, 5311, 5432
BstXI	CCANNNNNNTGG	1 cut(s)	4336
BstYI	RGATCY	6 cut(s)	2450, 4205, 4396, 4635, 5311, 5432
BstZ17I	GTATAC	1 cut(s)	5056
Bsu15I	ATCGAT	2 cut(s)	376, 1338
BsuI	GTATCC	4 cut(s)	2596, 3490, 5041, 6058
BsuRI	GGCC	5 cut(s)	1997, 2091, 4282, 6036, 6176
BsuTUI	ATCGAT	2 cut(s)	376, 1338
BtgI	CCRYGG	2 cut(s)	2092, 5071
BtgZI	GCGATG	1 cut(s)	350
BtrI	CACGTC	2 cut(s)	3412, 4731
BtsI	GCAGTG	5 cut(s)	511, 1526, 3682, 5565, 6087
BtuMI	TCGCGA	1 cut(s)	630
BveI	ACCTGC	4 cut(s)	15, 708, 2881, 3200
Cac8I	GCNNGC	9 cut(s)	254, 561, 565, 1653, 1841, 3572, 5230, 5963, 6207
CaiI	CAGNNNCTG	3 cut(s)	4118, 4208, 6086
CciI	TCATGA	4 cut(s)	793, 1783, 4245, 5662
CfoI	GCGC	4 cut(s)	363, 3464, 4537, 4674
Cfr10I	RCCGGY	1 cut(s)	6271
ClaI	ATCGAT	2 cut(s)	376, 1338
CseI	GACGC	1 cut(s)	4870
CspAI	ACCGGT	1 cut(s)	6271
DinI	GGCGCC	1 cut(s)	4536
DraI	TTTAAA	3 cut(s)	1114, 4746, 5124
DrdI	GACNNNNNNGTC	3 cut(s)	314, 3925, 4616
DseDI	GACNNNNNNGTC	3 cut(s)	314, 3925, 4616
Ecl136II	GAGCTC	1 cut(s)	596
Eco130I	CCWWGG	8 cut(s)	32, 2092, 2109, 3118, 4937, 5071, 5444, 6051
Eco24I	GRGCYC	2 cut(s)	598, 1091
Eco31I	GGTCTC	1 cut(s)	2300
Eco32I	GATATC	3 cut(s)	1336, 3793, 6058
Eco47I	GGWCC	8 cut(s)	4, 427, 1279, 1808, 2870, 4484, 5115, 5951
Eco53kI	GAGCTC	1 cut(s)	596
Eco57I	CTGAAG	8 cut(s)	2247, 2645, 3333, 3762, 4043, 4683, 5315, 5720
Eco72I	CACGTG	2 cut(s)	4868, 5180
Eco88I	CYCGRG	2 cut(s)	3837, 4009
EcoICRI	GAGCTC	1 cut(s)	596
EcoO109I	RGGNCCY	4 cut(s)	427, 1279, 1808, 5951
EcoRI	GAATTC	1 cut(s)	1120
EcoRII	CCWGG	5 cut(s)	1552, 1833, 2345, 3565, 3880
EcoRV	GATATC	3 cut(s)	1336, 3793, 6058
EcoT14I	CCWWGG	8 cut(s)	32, 2092, 2109, 3118, 4937, 5071, 5444, 6051
EcoT22I	ATGCAT	3 cut(s)	1657, 2061, 3976
EcoT38I	GRGCYC	2 cut(s)	598, 1091
EgeI	GGCGCC	1 cut(s)	4536
EheI	GGCGCC	1 cut(s)	4536
ErhI	CCWWGG	8 cut(s)	32, 2092, 2109, 3118, 4937, 5071, 5444, 6051
Esp3I	CGTCTC	2 cut(s)	2984, 3418
FalI	AAGNNNNNCTT	6 cut(s)	3988, 4020, 4966, 4998, 5844, 5876
FaqI	GGGAC	3 cut(s)	440, 3548, 4763
FauI	CCCGC	4 cut(s)	552, 556, 1290, 5037
FauNDI	CATATG	1 cut(s)	3936
FbaI	TGATCA	1 cut(s)	1801
FblI	GTMKAC	2 cut(s)	1579, 5055
FriOI	GRGCYC	2 cut(s)	598, 1091
GlaI	GCGC	4 cut(s)	362, 3463, 4536, 4673
GsaI	CCCAGC	3 cut(s)	62, 252, 4785
GsuI	CTGGAG	5 cut(s)	319, 2439, 3348, 3528, 4978
HaeII	RGCGCY	2 cut(s)	364, 4538
HaeIII	GGCC	5 cut(s)	1997, 2091, 4282, 6036, 6176
HapII	CCGG	6 cut(s)	550, 702, 955, 5893, 6177, 6272
HgaI	GACGC	1 cut(s)	4870
HhaI	GCGC	4 cut(s)	363, 3464, 4537, 4674
Hin1I	GRCGYC	2 cut(s)	4535, 4862
Hin6I	GCGC	4 cut(s)	361, 3462, 4535, 4672
HinP1I	GCGC	4 cut(s)	361, 3462, 4535, 4672
HincII	GTYRAC	5 cut(s)	2587, 2776, 3930, 5067, 5733
HindII	GTYRAC	5 cut(s)	2587, 2776, 3930, 5067, 5733
HindIII	AAGCTT	1 cut(s)	5963
HpaI	GTTAAC	1 cut(s)	2776
HpaII	CCGG	6 cut(s)	550, 702, 955, 5893, 6177, 6272
Hpy99I	CGWCG	3 cut(s)	196, 572, 591
HpyCH4IV	ACGT	6 cut(s)	191, 3411, 4730, 4867, 5179, 5275
HpySE526I	ACGT	6 cut(s)	191, 3411, 4730, 4867, 5179, 5275
Hsp92I	GRCGYC	2 cut(s)	4535, 4862
HspAI	GCGC	4 cut(s)	361, 3462, 4535, 4672
KasI	GGCGCC	1 cut(s)	4534
KflI	GGGWCCC	1 cut(s)	427
Kpn2I	TCCGGA	1 cut(s)	701
KpnI	GGTACC	1 cut(s)	2343
Ksp22I	TGATCA	1 cut(s)	1801
KspAI	GTTAAC	1 cut(s)	2776
LguI	GCTCTTC	1 cut(s)	1690
LmnI	GCTCC	8 cut(s)	552, 957, 1086, 1749, 2327, 4273, 4304, 5798
MaeII	ACGT	6 cut(s)	191, 3411, 4730, 4867, 5179, 5275
MfeI	CAATTG	3 cut(s)	260, 3185, 4358
MflI	RGATCY	6 cut(s)	2450, 4205, 4396, 4635, 5311, 5432
MhlI	GDGCHC	6 cut(s)	598, 1091, 3117, 5409, 5795, 6103
Mly113I	GGCGCC	1 cut(s)	4535
MlyI	GAGTC	9 cut(s)	351, 2521, 2531, 3122, 3158, 3518, 4439, 5728, 6301
Mph1103I	ATGCAT	3 cut(s)	1657, 2061, 3976
MroI	TCCGGA	1 cut(s)	701
MroXI	GAANNNNTTC	3 cut(s)	2244, 5547, 5856
MslI	CAYNNNNRTG	7 cut(s)	1348, 3120, 3395, 3963, 5220, 5823, 5907
MspA1I	CMGCKG	2 cut(s)	559, 4154
MspCI	CTTAAG	2 cut(s)	1844, 5861
MspI	CCGG	6 cut(s)	550, 702, 955, 5893, 6177, 6272
MspR9I	CCNGG	6 cut(s)	551, 1554, 1835, 2347, 3567, 3882
MunI	CAATTG	3 cut(s)	260, 3185, 4358
Mva1269I	GAATGC	4 cut(s)	2080, 4204, 4270, 5763
MvaI	CCWGG	5 cut(s)	1554, 1835, 2347, 3567, 3882
MvnI	CGCG	2 cut(s)	630, 1285
NarI	GGCGCC	1 cut(s)	4535
NciI	CCSGG	1 cut(s)	551
NcoI	CCATGG	2 cut(s)	2092, 5071
NdeI	CATATG	1 cut(s)	3936
NmeAIII	GCCGAG	4 cut(s)	365, 382, 617, 6099
NmuCI	GTSAC	6 cut(s)	343, 977, 1303, 1360, 1940, 4607
NruI	TCGCGA	1 cut(s)	630
NsiI	ATGCAT	3 cut(s)	1657, 2061, 3976
NspI	RCATGY	3 cut(s)	1655, 1699, 5822
NspV	TTCGAA	5 cut(s)	659, 674, 695, 1778, 1978
OliI	CACNNNNGTG	3 cut(s)	1348, 3120, 5220
PaeI	GCATGC	1 cut(s)	1655
PaeR7I	CTCGAG	1 cut(s)	4009
PagI	TCATGA	4 cut(s)	793, 1783, 4245, 5662
PciI	ACATGT	2 cut(s)	1695, 5818
PciSI	GCTCTTC	1 cut(s)	1690
PcsI	WCGNNNNNNNCGW	2 cut(s)	373, 595
PctI	GAATGC	4 cut(s)	2080, 4204, 4270, 5763
PdmI	GAANNNNTTC	3 cut(s)	2244, 5547, 5856
PflMI	CCANNNNNTGG	1 cut(s)	3124
PfoI	TCCNGGA	1 cut(s)	549
PinAI	ACCGGT	1 cut(s)	6271
PleI	GAGTC	9 cut(s)	350, 2521, 2531, 3122, 3157, 3517, 4439, 5728, 6300
PluTI	GGCGCC	1 cut(s)	4538
PmaCI	CACGTG	2 cut(s)	4868, 5180
PmlI	CACGTG	2 cut(s)	4868, 5180
PpsI	GAGTC	9 cut(s)	350, 2521, 2531, 3122, 3157, 3517, 4439, 5728, 6300
Ppu21I	YACGTR	2 cut(s)	4868, 5180
PpuMI	RGGWCCY	4 cut(s)	427, 1279, 1808, 5951
PscI	ACATGT	2 cut(s)	1695, 5818
PsiI	TTATAA	1 cut(s)	3378
Psp124BI	GAGCTC	1 cut(s)	598
Psp5II	RGGWCCY	4 cut(s)	427, 1279, 1808, 5951
Psp6I	CCWGG	5 cut(s)	1552, 1833, 2345, 3565, 3880
PspCI	CACGTG	2 cut(s)	4868, 5180
PspFI	CCCAGC	3 cut(s)	58, 248, 4781
PspGI	CCWGG	5 cut(s)	1552, 1833, 2345, 3565, 3880
PspPPI	RGGWCCY	4 cut(s)	427, 1279, 1808, 5951
PstI	CTGCAG	5 cut(s)	1591, 2410, 2878, 3076, 5194
PstNI	CAGNNNCTG	3 cut(s)	4118, 4208, 6086
PsuI	RGATCY	6 cut(s)	2450, 4205, 4396, 4635, 5311, 5432
PvuII	CAGCTG	1 cut(s)	4154
RruI	TCGCGA	1 cut(s)	630
RseI	CAYNNNNRTG	7 cut(s)	1348, 3120, 3395, 3963, 5220, 5823, 5907
SacI	GAGCTC	1 cut(s)	598
SapI	GCTCTTC	1 cut(s)	1690
ScaI	AGTACT	3 cut(s)	1744, 4015, 5600
SchI	GAGTC	9 cut(s)	351, 2521, 2531, 3122, 3158, 3518, 4439, 5728, 6301
ScrFI	CCNGG	6 cut(s)	551, 1554, 1835, 2347, 3567, 3882
SduI	GDGCHC	6 cut(s)	598, 1091, 3117, 5409, 5795, 6103
SfoI	GGCGCC	1 cut(s)	4536
Sfr274I	CTCGAG	1 cut(s)	4009
SfuI	TTCGAA	5 cut(s)	659, 674, 695, 1778, 1978
SinI	GGWCC	8 cut(s)	4, 427, 1279, 1808, 2870, 4484, 5115, 5951
SlaI	CTCGAG	1 cut(s)	4009
SmiI	ATTTAAAT	1 cut(s)	1114
SmiMI	CAYNNNNRTG	7 cut(s)	1348, 3120, 3395, 3963, 5220, 5823, 5907
SmlI	CTYRAG	7 cut(s)	1844, 3009, 3032, 3216, 4009, 5861, 5946
SmoI	CTYRAG	7 cut(s)	1844, 3009, 3032, 3216, 4009, 5861, 5946
SphI	GCATGC	1 cut(s)	1655
SspDI	GGCGCC	1 cut(s)	4534
SspI	AATATT	2 cut(s)	2386, 4555
SstI	GAGCTC	1 cut(s)	598
StyD4I	CCNGG	6 cut(s)	549, 1552, 1833, 2345, 3565, 3880
StyI	CCWWGG	8 cut(s)	32, 2092, 2109, 3118, 4937, 5071, 5444, 6051
SwaI	ATTTAAAT	1 cut(s)	1114
TaiI	ACGT	6 cut(s)	194, 3414, 4733, 4870, 5182, 5278
TatI	WGTACW	8 cut(s)	531, 1225, 1742, 2366, 4013, 4346, 5091, 5598
TauI	GCSGC	2 cut(s)	166, 232
TseFI	GTSAC	6 cut(s)	343, 977, 1303, 1360, 1940, 4607
Tsp45I	GTSAC	6 cut(s)	343, 977, 1303, 1360, 1940, 4607
TspGWI	ACGGA	4 cut(s)	816, 2572, 4526, 5288
Van91I	CCANNNNNTGG	1 cut(s)	3124
Vha464I	CTTAAG	2 cut(s)	1844, 5861
VneI	GTGCAC	1 cut(s)	6099
VpaK11BI	GGWCC	8 cut(s)	4, 427, 1279, 1808, 2870, 4484, 5115, 5951
XbaI	TCTAGA	2 cut(s)	284, 2420
XceI	RCATGY	3 cut(s)	1655, 1699, 5822
XcmI	CCANNNNNNNNNTGG	1 cut(s)	5578
XhoI	CTCGAG	1 cut(s)	4009
XmiI	GTMKAC	2 cut(s)	1579, 5055
XmnI	GAANNNNTTC	3 cut(s)	2244, 5547, 5856
ZrmI	AGTACT	3 cut(s)	1744, 4015, 5600
Zsp2I	ATGCAT	3 cut(s)	1657, 2061, 3976

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.