Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001752

Physical Location & Seq

Genomic Coordinates Forward (+)

58511990 .. 58521395

Gene Structure 9406 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ26639

Sequence Viewer

CDS Protein Promoter (2k)

Length: 6324 bp

ATGGTGGTTGAAATTGACCTTTCCTTTCTTGATCATGAAAAATTGACAGTCTACCCTGGTCTCCGCTGGGAAAGTGAAACTGCCGGCCAAGATAAAACCAAACTTCGCAAGCTTCGCACAAAAACGAAGAAGAAGATTAGAAGAAGAAGAAGAAGGAAGAAGACGAAGAAGAGCAGAGAGCCCAACCAACCAGAGATTCCAGATCTCTCTCTCTCTTCATGGACCTCCCTCAGTACCTTCACCACCATCCAAGGTACGCTCCTTCCTCCTCCTCCTCTGACCCTAATTTCCCAAACTACCCTCACCGCACCACCAACCACTACCACCACCGCCACACTCCGCCTCCTCCTCCCCCAACCCAGCCCCCACAGCTCCGCCCACAATCCCCCTCCTCCTTCAAATCCCTACCCCCTCCTCCGCCGCCACCACATCCCCAAAGGACCACCTTCTCCCCCACCCCATCGATTCCGATCATTCCAGAACCTTCTCCCTCGCACCACTCACCGCCCGCTGCCTCTCGATTCCGACCGGCCACGTCATCGCCTCTACCTCGAGTCCGGTCCGGATTACCGGGACCGGTCCAGGAACTATTCGCCGCGCGATTACGACCGCGAATTGCATAAACCCTATAGGCGCGATCCGGACGGCGGCGGCGCTAGGTTTAGATCGGAGTACGAAGAACAACGGGATCGTCGAGTTGATGACGGTTATCGGCGTCGCTCGAGCAATCACGAAACGACGACGTTTCGCGAAGTAGAGCTCCAGGATTCGGGTTCGGGTTGCTACGACGAGAGCGCGTATGAGGAGCTGTTGAAGAGTGGGAGGAGATATGAGGCGTATGAGATTCAAAGGTGGGGTCTTGAGAGGGCCCAATCGGAGGAGGATTTGTACGATCCTTTCGAATTGGATGAGCACGATGAGGAGGATCGGATTGTTTCGGACAAGAGGGATTATTATGGTTCCGAATCAGGAAGAAATAGTAGTACTAGTAGATGGAAGCAGATACAAAAGAAGAGTGCTTTGCTTAGGCTTCAAACGCCGAAGGCCCGGGACCGGAATTACTCTGCTTATTATGATAGTTCCGGCTCCGGTGGATCTTTCAGAGGGAAAGAACAGTATGAGTATGAGTATTCAGGTCATGGGAGGAAGGATGCAGTAGAAGAAGAGAGGCGTGGTGGTGGAGGAGAAGAGAGAGGCCAACAACAGAGAGGTGGGAGTAGTCCTCTGGACCTTGATGTTTCGTTTAAGTCGAATTCGCTGGTAGCCAAGCCGGTTAGAACTAGGGATGAGAAGAGAGGTTCAGTTTCGGATATGGATTGTTCAGAGTCACCACCTGCTAAGCCTTTTTGTGCGGATGTTGTAAATTTGGATAGTTTGGCACTTGTTTCGAATAAGACATCGAGTCCTGGCAAGGAGGCCATGAAGTTGAAAGGACAAGTTACTACTTCTGGCATGAATTCACAGCCTTGTTCTGTTGTGACTGATGATGCGTTTGTAAAGAGTGAAGTGGAAACAGCACCCAAGGGCAAGATTTTACATAAAGATGGCAAGGATGTTGGTTCCAGTCAGAAGTCTTCTCCCAACGTTTCTAAGAAGACAAAAGTAGTGAAGAAAATAGTGGCCAAGAAGACAGTGAAAAAGGTCACAAACCCCCCCACTTCACAGCCAGAAAGTAAGATTGATGAGCCGGGGACGAGTACTGTTCACAGTCTATTTGCAGGCACTGGCAAAGGTGAAACCTCTTCCATTTCTGATCCTTGTCCAAATGATTTGCATGTGTTGCCTGTAGATAAGGAAGTAGAAGGTTCTCAGCCAAATGTTCTATCAGATGAATATGGCACTGTTCTCAACTCTTGTAGTAAGAATATTGGGAACAACTCAAGTGCAAATTTGGGCTCTTTGAGTCCTGCAGAGATTAATACTGATCAGAAGCACCCTCTGAATGTAGATACTCCGGTCAAGGGCTTGCTTACCATTTCAAATTTTAACAGCAATGCAACTGACTCAATCAAGGTGGCTTCTTGTCCTGAAACTGGCGGTGTTGTGGATGTCAGCAAATCGATCTGTCAGAGTGGAAACATTTTATTGGTTGATAAAGTTGTACAAAAAGAATCATCACAGGCCATGTTGGCTGTAGAAGGCAATTTGAGCTCTGGTTTTTTAAATTCAGATAAGATGCATGAACTCACGAATGTAAAGGGTTCTGAACATGGGGCTGAAACCTTGGAGAAACTGTCACATCAGGAAATCATTGTTCCTGATGTTGGCACTGTGGATGCAGTTAGCGAACAACCTTGTAGATATCAGCTCCCCACATCACTTCAAAATGGTGGTGTTGTGGAAGAACTTCCTAAGGCTATATCTTCAGCAGAAAATAATATGGCGGTTGGTTTATCGAGTTCAGGGGAGACCAAAGCTGTCCGCTCCAAGATTGGTAGACGTACAAGGTGGGATTCTGATGAAGTTTATGTTAAGAAAGATAAGAGCATTACAGTTTCCAATGGTGGGAATACTAATTCTTTTGGCAAGCAGTCATCACCTGATTGTGACTCTAGATCTTTTGAAATTTGTGCCACAGAAAGATCTCCAAATATACCAAAATCAGGTGGAGATACTCATAGTGTTACACCTATGATTCAAAAGAAGAGAAAAGTTAAAACGCAGTTAGACTTCTCAAGGATATCCGACACTTGTGTAGACCCTGTAAATGTTTCTCCCCGCAAAGATGCACCGGATACAACAGTAAGTTCTTTCCTGAAGGATCCTAGTCATGCAGAAGTTTCTGTTTCTGGTGTTCAAAAGTTAGATATGGGATCACAGCCTGGTAATGATTGGGTCAGCGTTCTGAATGGGAAAAGTTCAGTAAATGGGTTTTCTGACACTAAGCTTTCAGCTACAATTGATGCTAACTATGATACAAATGAGACTTCACCCGAGTATTTAAAGAGGAGAAAAGTGTCTGGCACTCATCTGGTATTGACTTCAGCTCAAACCAATGGAGGACCTGCAAATAAATCTACATCTTATATACAGGAATCTTCAACTCATAATGATGTTCCAACATATCAAGCGGACAAAGGTGCTTCTTCTAGCATAGGTTCTCAGTGTGCTACTTCTAATTTAATTCCATCTCCTGAGGAAATCAATGTCTATCTTGAGGACATTATGGCTGCAGTATCATCTGATACTGTAGCTGCAGCTAGGGACTCCTTTACTAATGATGATATGAAGATTAAGCACCAAGGTATTGACTCTTCTTCAGTTTCTGAAGGGTCAGGTATTCCACATATGCAAATCCTTTGTCCTTTACAATCACAGAATGAGGATAAAGAGGATGGTACTGAAGTTATGGTTGTAAATAATCATCACCTTGACATTTTGGATATAGATGGTAGTCATGAAAAAGACTTTGATGTTTGTGCAACAAATGAGCACATTATGGTTCAAGGTGAGACTGCTCCATGTACAATTCATTCAGAGCTTCAGCCTGCTGATTTGGGTATTAATTCTTTCAGTACAAATATACAATCAGATTACCTCTGTGTTAAGGATAAACTGCCTTTTGTGCCAAGTTGTCTGCTTTCAATTGCTAATGGCAATGAAGTAACTTCTACCAACTCTATTGATGAAGGCATGAAGTCTGTGTCTGATACGCTGTCAGATACAGGTACTCCAGAAACTTCAACTAGTATCACTGACGTGCATATGCTGATTTGTAATCCTTCGGTTATTAAAAGTTTTGACGAAAAAGTTTGTGCGGATGACCAGAAATTTGAGGTGAAGTCTGAGGTTGCATCCGCTGGGAATTTATTCTCAGAGACCAAAACTAATTTAACATTAGATAATGCAACTGAAGGTCACCAATCAGTCACAGAGAAGGCAGTACCTTTGAAATTGCAGGATTCCAAAAAGACATCTCATGGTCTGCATCTCATAAGTGCTGAATCTGCATTGAAGAACCAGCTGGGTCAAGCTACTCATAGGATTGTTCCAGGTCGTCCATTTTCTGCCTTTACTACCTCACAGAAGGCTACCTCTTCAACACATATATCAAAGCCTCGGACTTGGCATCGAAATGCTAATTCATCTGTATCTCCTCTTCCTGTGAGTACTCTTCCACCTCAAAGGCAGTTGCCACAAAGAAATGGAAAACTTGAAAGTAATTCTTATGTTCGTAAAGGTAACACCCTTGTTAGAAGACGTGCTACAATTGCTGCTGTACCACAAATCTCTCAAGGTCTCAGTTCATCTGTTCATCAGTTGAACTTTTCAGGTATAGATGGATTGAAGAAGAATGCAGGATCCGACAGTAGGGTTGACATTAAAAACCCTCCAAGAACAGGAGGACTCAATGCTTCTTCAGATAGGCCCCCAGCCCCACTACCCAGTGGAGTCAAAATGTCTGCATCTGCTGCCGTCTCTTCCGGGATTCCTACATCATCCCCACTAGCTGAGCCTCTTCTTAGTGATATCTCTGGAACTAAATCAGATCCTATGAATTGTTCGGAGACGAAAGATGCAGAAGGATCAGTCAAGGACTCGCTGGCAACTTCTGATACTCAGGAATACCATAGTGGTCCAGTCAACAATCTACATGATGGGAATCTGGCATCTTCAAATATGAAGAAGGTTATATATGTAAAGCGAAAATTAAATCAGTTGGTTGCATCATCTTCAAATCCGTCAGACCTTTCTGTCCACAATGCTGATAAGAACCAACCCTCAGATGGCTACTACAAGAGGCGCAAACATCAGCTAATTAGGTCTTCTTTGGAATGTAATGGCAAAGATACTGTTCTCCTGCCCACTGACAATATAAACTCAGGGGAGCAAAAGGCTCGTAAGGTTATCCCCAGTAGAACATTTAACAAGAAGCGATCACTTAAGGCTGTTGCGAGGATGAGTAAAAAGAATTCCTTGGTCTGGACACCAAGTGGTTCACAGTCATCAAATAATAATGGTAGTTCATATGACCATCAGAAGGTTCTGCCTCAGCTGTTTCCGTGGAAAAGAGCAAGATACTGGAGAACTGTCATGCAAAGTCAGGCTTCCAATTTCAATTATAGTTCCTCATCAACAATCAGTAAAAAGTTGCTGCTCTCAAGGATGAGGGATACTGTATACACTAGGTCAACCCATGGATTTTCACTTAGAAAGTACAAGGTATTAAGTGTTGGTGGATCTAGTTTAAAATGGTCAAAATCCATTGAAAGTCGCTCAAAGAAAGTTAATGAGGAAGCTACACGGGCTGTTGCTGAAGTAGAGAAGAAGAAAAGAGAACACAATGGTGCTGCCTGCACTAGTTCTGGTTCTAAAATCAGAAACTCACCGGGAAAACGAATATTCCGCATTGGCTCTGTTCGTTACAAAATGGATCCTTCAAGGCGGACACTTAAGAGGATTTCAGATGACGAATCCTCAAAGTCTGTTGTGCTGAATCCAGAAACGAATGCCAAGAGATCATATGTTCCAAGGAGGTTGGTGATTGGGAATGACGAATATGTGCGGATTGGAAATGGTAATCAGCTTATTAGAGATCCAAAGAAACGAACTCGCATATTGGCAAGTGAAAGAGTTAGATGGAGTTTGCACACTGCCAGACAGCGGTTGGCAAAAAAACGGAAATACTGCCAGTTTTTCACACGATTTGGGAAGTGTAACAAGGATGATGGAAAATGTCCCTATATTCATGACTCCTCCAAAATTGCAGTCTGCACAAAGTATCTGAACGGTTTATGTTCCAACCCCAACTGCAGATTAACCCACAAGGTCATTCCAGAAAGAATGCCAGACTGTTCTTTCTTTCTGCAAGGTTTATGCACCAATAAAAATTGTTCTTACAGACATGTAAATGTAAATCCGAAGGCATCTACTTGTGAAGGATTTCTTAAAGGTTATTGTGCGGACGGAAATGAGTGCCGGAAGAAGCACAGCTATGTCTGCCAGACTTTTGAAGAAACAGGAACGTGTCCTCAAGGGCCCAAATGCAAGCTTCACCACCCCAAAAAGCGTATGAAGGGAAAGATAAAGAAACGATCAAGAGAACATAGAAATGGTTGGGGACGTTACTTTGTTTCCAAGGATGTTGGTGTTTCTGAGCCCGTAACAGCGTCTGCAAAGCACTGTGCACAAAATGGTGATGACATATTTGGTAATGATTTCGTTAGCATCAATGTTAGTGACGAGGAGGCTGGAGAAAGTAACAATCCACCTGAGCAAACCACATTTTATGACAGTGATCCCTCTGAATTAGACTTGGATGATCTTGATGAACTAATTAAACCGGTTCGTTTGTTGAATAAGATGAAGACAAACATTTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005847 GO:0005849 GO:0006139 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0015031 GO:0015833 GO:0015931 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0016973 GO:0031123 GO:0031124 GO:0031503 GO:0031974 GO:0031981 GO:0032991 GO:0033036 GO:0034613 GO:0034641 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045184 GO:0046483 GO:0046907 GO:0050657 GO:0050658 GO:0051028 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0098787 GO:0098789 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

2107

Amino Acids

232.2

Weight (kDa)

9.12

Isoelectric Point (pI)

50.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0001752)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21580 AT1G21580 AT1G21580 AT1G21580 AT1G21580 AT1G21580 AT1G21580 AT1G21580 AT1G21580
fragaria_vesca	FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950
malus_domestica	MD08G1160000.v1.1 MD08G1160100.v1.1 MD08G1160200.v1.1 MD15G1133400.v1.1
prunus_persica	Prupe.1G489000_v2.0.a1 Prupe.1G489000_v2.0.a1 Prupe.1G489000_v2.0.a1
pyrus_communis	pycom08g13490 pycom08g13510
rosa_chinensis	RchiOBHm_Chr6g0296771
rosa_laevigata	RLG00000011660 RLG00000013665
rosa_multiflora	Rmu_ssc0000192.1_g000011
rosa_rugosa	Rorug06G0265800 Rorug06G0265800 Rorug06G0265900 Rorug06G0266000
rosa_samantha	Rh6AG376900 Rh6AG377000 Rh6BG385300 Rh6CG390500 Rh6DG377600
rosa_wichuraiana	Rw6G032950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1342
AasI	GACNNNNNNGTC	1 cut(s)	4694
Acc36I	ACCTGC	2 cut(s)	1342, 3013
AccBSI	CCGCTC	1 cut(s)	2424
AccI	GTMKAC	4 cut(s)	51, 2437, 2697, 5121
AccII	CGCG	6 cut(s)	598, 600, 612, 636, 750, 797
AccIII	TCCGGA	2 cut(s)	562, 640
AclI	AACGTT	1 cut(s)	1584
AcoI	YGGCCR	3 cut(s)	85, 530, 1620
AcyI	GRCGYC	1 cut(s)	715
AdeI	CACNNNGTG	1 cut(s)	4934
AflII	CTTAAG	2 cut(s)	4883, 5393
AflIII	ACRYGT	2 cut(s)	5845, 5966
AgeI	ACCGGT	2 cut(s)	576, 6283
AhdI	GACNNNNNGTC	1 cut(s)	1401
AhlI	ACTAGT	3 cut(s)	986, 3686, 5300
AjiI	CACGTC	3 cut(s)	536, 3700, 4202
AjnI	CCWGG	6 cut(s)	55, 581, 762, 1405, 2821, 3991
AjuI	GAANNNNNNNTTGG	2 cut(s)	180, 212
AleI	CACNNNNGTG	2 cut(s)	3698, 5286
Alw21I	GWGCWC	5 cut(s)	762, 915, 2153, 3435, 6130
Alw26I	GTCTC	8 cut(s)	65, 2402, 2918, 3446, 3812, 4244, 4423, 4502
Alw44I	GTGCAC	1 cut(s)	6126
AlwNI	CAGNNNCTG	3 cut(s)	1724, 3266, 6113
Ama87I	CYCGRG	4 cut(s)	551, 721, 1047, 2933
Aor13HI	TCCGGA	2 cut(s)	562, 640
ApaI	GGGCCC	2 cut(s)	871, 5982
ApaLI	GTGCAC	1 cut(s)	6126
ApeKI	GCWGC	8 cut(s)	511, 3170, 3194, 3197, 4214, 4412, 5095, 5291
ArsI	GACNNNNNNTTYG	8 cut(s)	841, 873, 3286, 3318, 3755, 3787, 5694, 5726
AseI	ATTAAT	2 cut(s)	1917, 3504
AsiGI	ACCGGT	2 cut(s)	576, 6283
Asp700I	GAANNNNTTC	3 cut(s)	2346, 3809, 5883
AspLEI	GCGC	5 cut(s)	600, 636, 656, 797, 4746
AsuC2I	CCSGG	6 cut(s)	572, 1048, 1049, 1689, 4426, 5331
AsuII	TTCGAA	2 cut(s)	900, 1388
AvaI	CYCGRG	4 cut(s)	551, 721, 1047, 2933
AvaII	GGWCC	9 cut(s)	222, 440, 560, 574, 579, 1051, 1228, 3002, 4577
AxyI	CCTNAGG	2 cut(s)	2352, 3135
BaeGI	GKGCMC	3 cut(s)	871, 5982, 6130
BaeI	ACNNNNGTAYC	6 cut(s)	1941, 1974, 2727, 2760, 3330, 3363
BalI	TGGCCA	1 cut(s)	1622
BamHI	GGATCC	3 cut(s)	2761, 4301, 5374
BanII	GRGCYC	7 cut(s)	183, 762, 871, 1898, 2153, 5982, 6102
BarI	GAAGNNNNNNTAC	6 cut(s)	3238, 3270, 4083, 4115, 4189, 4221
BbsI	GAAGAC	7 cut(s)	167, 1566, 1601, 1634, 4204, 4758, 6314
Bbv12I	GWGCWC	5 cut(s)	762, 915, 2153, 3435, 6130
BbvCI	CCTCAGC	1 cut(s)	4992
BbvI	GCAGC	8 cut(s)	498, 3157, 3181, 3209, 4201, 4399, 5082, 5278
BceAI	ACGGC	2 cut(s)	661, 4400
BcgI	CGANNNNNNTGC	4 cut(s)	1368, 1402, 4820, 4854
BciT130I	CCWGG	6 cut(s)	57, 583, 764, 1407, 2823, 3993
BciVI	GTATCC	2 cut(s)	2728, 5107
BclI	TGATCA	2 cut(s)	31, 1924
BcnI	CCSGG	6 cut(s)	572, 1048, 1049, 1689, 4426, 5331
BcoDI	GTCTC	8 cut(s)	65, 2402, 2918, 3446, 3812, 4244, 4423, 4502
BcuI	ACTAGT	3 cut(s)	986, 3686, 5300
BfmI	CTRYAG	8 cut(s)	628, 1785, 1908, 2133, 3171, 3189, 3195, 5752
BfoI	RGCGCY	1 cut(s)	657
BfrI	CTTAAG	2 cut(s)	4883, 5393
BfuAI	ACCTGC	2 cut(s)	1342, 3013
BfuI	GTATCC	2 cut(s)	2728, 5107
BglI	GCCNNNNNGGC	1 cut(s)	2129
BglII	AGATCT	3 cut(s)	202, 2555, 2582
BlpI	GCTNAGC	2 cut(s)	1338, 4452
BmcAI	AGTACT	3 cut(s)	985, 1699, 4111
Bme18I	GGWCC	9 cut(s)	222, 440, 560, 574, 579, 1051, 1228, 3002, 4577
BmeRI	GACNNNNNGTC	1 cut(s)	1401
BmeT110I	CYCGRG	4 cut(s)	551, 721, 1047, 2933
BmgBI	CACGTC	3 cut(s)	536, 3700, 4202
BmrI	ACTGGG	2 cut(s)	4380, 4848
BmuI	ACTGGG	2 cut(s)	4380, 4848
BpiI	GAAGAC	7 cut(s)	167, 1566, 1601, 1634, 4204, 4758, 6314
BplI	GAGNNNNNCTC	2 cut(s)	1207, 1239
BpmI	CTGGAG	4 cut(s)	746, 3657, 5044, 6213
Bpu10I	CCTNAGC	3 cut(s)	1025, 4992, 6213
Bpu1102I	GCTNAGC	2 cut(s)	1338, 4452
Bpu14I	TTCGAA	2 cut(s)	900, 1388
BpuEI	CTTGAG	7 cut(s)	881, 1864, 2659, 3176, 4218, 5086, 5958
BpuMI	CCSGG	6 cut(s)	572, 1048, 1049, 1689, 4426, 5331
Bsa29I	ATCGAT	2 cut(s)	463, 2060
BsaBI	GATNNNNATC	2 cut(s)	469, 4602
BsaHI	GRCGYC	1 cut(s)	715
BsaI	GGTCTC	4 cut(s)	65, 2402, 3812, 4244
BsaWI	WCCGGW	9 cut(s)	557, 562, 576, 640, 1053, 1088, 1954, 2731, 6283
BsaXI	ACNNNNNCTCC	8 cut(s)	327, 357, 872, 902, 2219, 2249, 3655, 3685
Bse118I	RCCGGY	5 cut(s)	83, 528, 576, 1270, 6283
Bse1I	ACTGG	8 cut(s)	1563, 1729, 2038, 4386, 4580, 4854, 5027, 5632
Bse21I	CCTNAGG	2 cut(s)	2352, 3135
Bse3DI	GCAATG	2 cut(s)	1999, 3604
Bse8I	GATNNNNATC	2 cut(s)	469, 4602
BseAI	TCCGGA	2 cut(s)	562, 640
BseBI	CCWGG	6 cut(s)	57, 583, 764, 1407, 2823, 3993
BseCI	ATCGAT	2 cut(s)	463, 2060
BseJI	GATNNNNATC	2 cut(s)	469, 4602
BseMI	GCAATG	2 cut(s)	1999, 3604
BseNI	ACTGG	8 cut(s)	1563, 1729, 2038, 4386, 4580, 4854, 5027, 5632
BseSI	GKGCMC	3 cut(s)	871, 5982, 6130
BseXI	GCAGC	8 cut(s)	498, 3157, 3181, 3209, 4201, 4399, 5082, 5278
BseYI	CCCAGC	5 cut(s)	66, 359, 3800, 3964, 4372
BsgI	GTGCAG	2 cut(s)	5281, 5698
Bsh1236I	CGCG	6 cut(s)	598, 600, 612, 636, 750, 797
Bsh1285I	CGRYCG	2 cut(s)	529, 610
BshTI	ACCGGT	2 cut(s)	576, 6283
BshVI	ATCGAT	2 cut(s)	463, 2060
BsiEI	CGRYCG	2 cut(s)	529, 610
BsiHKAI	GWGCWC	5 cut(s)	762, 915, 2153, 3435, 6130
BsiHKCI	CYCGRG	4 cut(s)	551, 721, 1047, 2933
BslFI	GGGAC	6 cut(s)	587, 1064, 1705, 3218, 5664, 6075
BsmAI	GTCTC	8 cut(s)	65, 2402, 2918, 3446, 3812, 4244, 4423, 4502
BsmBI	CGTCTC	2 cut(s)	4423, 4502
BsmFI	GGGAC	6 cut(s)	587, 1064, 1705, 3218, 5664, 6075
BsmI	GAATGC	3 cut(s)	4300, 5455, 5790
Bso31I	GGTCTC	4 cut(s)	65, 2402, 3812, 4244
BsoBI	CYCGRG	4 cut(s)	551, 721, 1047, 2933
Bsp119I	TTCGAA	2 cut(s)	900, 1388
Bsp120I	GGGCCC	2 cut(s)	867, 5978
Bsp13I	TCCGGA	2 cut(s)	562, 640
Bsp1407I	TGTACA	2 cut(s)	2101, 3464
Bsp1720I	GCTNAGC	2 cut(s)	1338, 4452
Bsp19I	CCATGG	1 cut(s)	5137
Bsp68I	TCGCGA	1 cut(s)	750
BspDI	ATCGAT	2 cut(s)	463, 2060
BspEI	TCCGGA	2 cut(s)	562, 640
BspFNI	CGCG	6 cut(s)	598, 600, 612, 636, 750, 797
BspHI	TCATGA	3 cut(s)	34, 3397, 5689
BspMAI	CTGCAG	4 cut(s)	1912, 3175, 3199, 5756
BspMI	ACCTGC	2 cut(s)	1342, 3013
BspQI	GCTCTTC	1 cut(s)	164
BspT104I	TTCGAA	2 cut(s)	900, 1388
BspTI	CTTAAG	2 cut(s)	4883, 5393
BspTNI	GGTCTC	4 cut(s)	65, 2402, 3812, 4244
BsrBI	CCGCTC	1 cut(s)	2424
BsrDI	GCAATG	2 cut(s)	1999, 3604
BsrFI	RCCGGY	5 cut(s)	83, 528, 576, 1270, 6283
BsrGI	TGTACA	2 cut(s)	2101, 3464
BsrI	ACTGG	8 cut(s)	1563, 1729, 2038, 4386, 4580, 4854, 5027, 5632
BssAI	RCCGGY	5 cut(s)	83, 528, 576, 1270, 6283
BssNAI	GTATAC	1 cut(s)	5122
BssNI	GRCGYC	1 cut(s)	715
BssT1I	CCWWGG	8 cut(s)	250, 1521, 2223, 3241, 4917, 5137, 5471, 6078
Bst1107I	GTATAC	1 cut(s)	5122
Bst2UI	CCWGG	6 cut(s)	57, 583, 764, 1407, 2823, 3993
BstACI	GRCGYC	1 cut(s)	715
BstAFI	CTTAAG	2 cut(s)	4883, 5393
BstAPI	GCANNNNNTGC	2 cut(s)	1780, 4412
BstAUI	TGTACA	2 cut(s)	2101, 3464
BstBI	TTCGAA	2 cut(s)	900, 1388
BstDSI	CCRYGG	2 cut(s)	5003, 5137
BstEII	GGTNACC	1 cut(s)	3857
BstFNI	CGCG	6 cut(s)	598, 600, 612, 636, 750, 797
BstH2I	RGCGCY	1 cut(s)	657
BstHHI	GCGC	5 cut(s)	600, 636, 656, 797, 4746
BstMAI	GTCTC	8 cut(s)	65, 2402, 2918, 3446, 3812, 4244, 4423, 4502
BstMCI	CGRYCG	2 cut(s)	529, 610
BstNI	CCWGG	6 cut(s)	57, 583, 764, 1407, 2823, 3993
BstNSI	RCATGY	2 cut(s)	1778, 5849
BstPI	GGTNACC	1 cut(s)	3857
BstSFI	CTRYAG	8 cut(s)	628, 1785, 1908, 2133, 3171, 3189, 3195, 5752
BstSLI	GKGCMC	3 cut(s)	871, 5982, 6130
BstUI	CGCG	6 cut(s)	598, 600, 612, 636, 750, 797
BstV1I	GCAGC	8 cut(s)	498, 3157, 3181, 3209, 4201, 4399, 5082, 5278
BstV2I	GAAGAC	7 cut(s)	167, 1566, 1601, 1634, 4204, 4758, 6314
BstZ17I	GTATAC	1 cut(s)	5122
Bsu15I	ATCGAT	2 cut(s)	463, 2060
Bsu36I	CCTNAGG	2 cut(s)	2352, 3135
BsuI	GTATCC	2 cut(s)	2728, 5107
BsuTUI	ATCGAT	2 cut(s)	463, 2060
BtgI	CCRYGG	2 cut(s)	5003, 5137
BtgZI	GCGATG	1 cut(s)	524
BtrI	CACGTC	3 cut(s)	536, 3700, 4202
BtsI	GCAGTG	1 cut(s)	5592
BtuMI	TCGCGA	1 cut(s)	750
BveI	ACCTGC	2 cut(s)	1342, 3013
CaiI	CAGNNNCTG	3 cut(s)	1724, 3266, 6113
CciI	TCATGA	3 cut(s)	34, 3397, 5689
CfoI	GCGC	5 cut(s)	600, 636, 656, 797, 4746
Cfr10I	RCCGGY	5 cut(s)	83, 528, 576, 1270, 6283
Cfr9I	CCCGGG	1 cut(s)	1047
ClaI	ATCGAT	2 cut(s)	463, 2060
CpoI	CGGWCCG	1 cut(s)	560
CseI	GACGC	2 cut(s)	704, 6099
CspAI	ACCGGT	2 cut(s)	576, 6283
CspCI	CAANNNNNGTGG	2 cut(s)	1995, 2030
CspI	CGGWCCG	1 cut(s)	560
DraI	TTTAAA	3 cut(s)	2163, 2943, 5190
DraIII	CACNNNGTG	1 cut(s)	4934
DrdI	GACNNNNNNGTC	1 cut(s)	4694
DriI	GACNNNNNGTC	1 cut(s)	1401
DseDI	GACNNNNNNGTC	1 cut(s)	4694
EaeI	YGGCCR	3 cut(s)	85, 530, 1620
Eam1105I	GACNNNNNGTC	1 cut(s)	1401
EciI	GGCGGA	4 cut(s)	329, 364, 407, 5401
Ecl136II	GAGCTC	2 cut(s)	760, 2151
Eco130I	CCWWGG	8 cut(s)	250, 1521, 2223, 3241, 4917, 5137, 5471, 6078
Eco24I	GRGCYC	7 cut(s)	183, 762, 871, 1898, 2153, 5982, 6102
Eco31I	GGTCTC	4 cut(s)	65, 2402, 3812, 4244
Eco32I	GATATC	3 cut(s)	2303, 2682, 4471
Eco47I	GGWCC	9 cut(s)	222, 440, 560, 574, 579, 1051, 1228, 3002, 4577
Eco53kI	GAGCTC	2 cut(s)	760, 2151
Eco81I	CCTNAGG	2 cut(s)	2352, 3135
Eco88I	CYCGRG	4 cut(s)	551, 721, 1047, 2933
Eco91I	GGTNACC	1 cut(s)	3857
EcoICRI	GAGCTC	2 cut(s)	760, 2151
EcoO109I	RGGNCCY	4 cut(s)	867, 3002, 4368, 5978
EcoO65I	GGTNACC	1 cut(s)	3857
EcoRI	GAATTC	3 cut(s)	1252, 1456, 4912
EcoRII	CCWGG	6 cut(s)	55, 581, 762, 1405, 2821, 3991
EcoRV	GATATC	3 cut(s)	2303, 2682, 4471
EcoT14I	CCWWGG	8 cut(s)	250, 1521, 2223, 3241, 4917, 5137, 5471, 6078
EcoT22I	ATGCAT	1 cut(s)	2181
EcoT38I	GRGCYC	7 cut(s)	183, 762, 871, 1898, 2153, 5982, 6102
ErhI	CCWWGG	8 cut(s)	250, 1521, 2223, 3241, 4917, 5137, 5471, 6078
Esp3I	CGTCTC	2 cut(s)	4423, 4502
FalI	AAGNNNNNCTT	8 cut(s)	4150, 4182, 4901, 4933, 5032, 5064, 5871, 5903
FaqI	GGGAC	6 cut(s)	587, 1064, 1705, 3218, 5664, 6075
FauI	CCCGC	2 cut(s)	516, 2726
FauNDI	CATATG	4 cut(s)	3288, 3705, 4969, 5464
FbaI	TGATCA	2 cut(s)	31, 1924
FblI	GTMKAC	4 cut(s)	51, 2437, 2697, 5121
FriOI	GRGCYC	7 cut(s)	183, 762, 871, 1898, 2153, 5982, 6102
GlaI	GCGC	5 cut(s)	599, 635, 655, 796, 4745
GsaI	CCCAGC	5 cut(s)	70, 363, 3804, 3968, 4376
GsuI	CTGGAG	4 cut(s)	746, 3657, 5044, 6213
HaeII	RGCGCY	1 cut(s)	657
HgaI	GACGC	2 cut(s)	704, 6099
HhaI	GCGC	5 cut(s)	600, 636, 656, 797, 4746
Hin1I	GRCGYC	1 cut(s)	715
Hin6I	GCGC	5 cut(s)	598, 634, 654, 795, 4744
HinP1I	GCGC	5 cut(s)	598, 634, 654, 795, 4744
HincII	GTYRAC	3 cut(s)	4318, 4585, 5133
HindII	GTYRAC	3 cut(s)	4318, 4585, 5133
HindIII	AAGCTT	3 cut(s)	110, 2885, 5990
Hpy99I	CGWCG	5 cut(s)	696, 720, 742, 745, 791
HpyCH4IV	ACGT	8 cut(s)	535, 743, 1584, 2440, 3699, 4201, 5966, 6064
HpySE526I	ACGT	8 cut(s)	535, 743, 1584, 2440, 3699, 4201, 5966, 6064
Hsp92I	GRCGYC	1 cut(s)	715
HspAI	GCGC	5 cut(s)	598, 634, 654, 795, 4744
Kpn2I	TCCGGA	2 cut(s)	562, 640
KroI	GCCGGC	1 cut(s)	83
KroNI	GCCGGC	1 cut(s)	85
Ksp22I	TGATCA	2 cut(s)	31, 1924
LguI	GCTCTTC	1 cut(s)	164
LmnI	GCTCC	9 cut(s)	264, 377, 765, 805, 1091, 2313, 2429, 3463, 4828
Lsp1109I	GCAGC	8 cut(s)	498, 3157, 3181, 3209, 4201, 4399, 5082, 5278
MaeII	ACGT	8 cut(s)	535, 743, 1584, 2440, 3699, 4201, 5966, 6064
MbiI	CCGCTC	1 cut(s)	2424
MfeI	CAATTG	3 cut(s)	2898, 3585, 4209
MlsI	TGGCCA	1 cut(s)	1622
MluNI	TGGCCA	1 cut(s)	1622
MmeI	TCCRAC	5 cut(s)	549, 2709, 3083, 4329, 5766
Mox20I	TGGCCA	1 cut(s)	1622
Mph1103I	ATGCAT	1 cut(s)	2181
MroI	TCCGGA	2 cut(s)	562, 640
MroNI	GCCGGC	1 cut(s)	83
MroXI	GAANNNNTTC	3 cut(s)	2346, 3809, 5883
MscI	TGGCCA	1 cut(s)	1622
MslI	CAYNNNNRTG	8 cut(s)	1542, 3051, 3698, 4074, 5286, 5850, 5934, 6051
Msp20I	TGGCCA	1 cut(s)	1622
MspA1I	CMGCKG	6 cut(s)	66, 511, 3800, 3964, 4996, 5605
MspCI	CTTAAG	2 cut(s)	4883, 5393
MunI	CAATTG	3 cut(s)	2898, 3585, 4209
Mva1269I	GAATGC	3 cut(s)	4300, 5455, 5790
MvaI	CCWGG	6 cut(s)	57, 583, 764, 1407, 2823, 3993
MvnI	CGCG	6 cut(s)	598, 600, 612, 636, 750, 797
NaeI	GCCGGC	1 cut(s)	85
NciI	CCSGG	6 cut(s)	572, 1048, 1049, 1689, 4426, 5331
NcoI	CCATGG	1 cut(s)	5137
NdeI	CATATG	4 cut(s)	3288, 3705, 4969, 5464
NgoMIV	GCCGGC	1 cut(s)	83
NmuCI	GTSAC	8 cut(s)	1326, 1477, 1642, 2235, 2546, 3857, 3868, 6179
NruI	TCGCGA	1 cut(s)	750
NsiI	ATGCAT	1 cut(s)	2181
NspI	RCATGY	2 cut(s)	1778, 5849
NspV	TTCGAA	2 cut(s)	900, 1388
OliI	CACNNNNGTG	2 cut(s)	3698, 5286
PaeR7I	CTCGAG	2 cut(s)	551, 721
PagI	TCATGA	3 cut(s)	34, 3397, 5689
PaqCI	CACCTGC	1 cut(s)	1342
PciI	ACATGT	1 cut(s)	5845
PciSI	GCTCTTC	1 cut(s)	164
PcsI	WCGNNNNNNNCGW	3 cut(s)	691, 897, 1247
PctI	GAATGC	3 cut(s)	4300, 5455, 5790
PdiI	GCCGGC	1 cut(s)	85
PdmI	GAANNNNTTC	3 cut(s)	2346, 3809, 5883
PfoI	TCCNGGA	3 cut(s)	581, 762, 4424
PinAI	ACCGGT	2 cut(s)	576, 6283
PpuMI	RGGWCCY	1 cut(s)	3002
PscI	ACATGT	1 cut(s)	5845
PshBI	ATTAAT	2 cut(s)	1917, 3504
Psp124BI	GAGCTC	2 cut(s)	762, 2153
Psp1406I	AACGTT	1 cut(s)	1584
Psp5II	RGGWCCY	1 cut(s)	3002
Psp6I	CCWGG	6 cut(s)	55, 581, 762, 1405, 2821, 3991
PspEI	GGTNACC	1 cut(s)	3857
PspFI	CCCAGC	5 cut(s)	66, 359, 3800, 3964, 4372
PspGI	CCWGG	6 cut(s)	55, 581, 762, 1405, 2821, 3991
PspOMI	GGGCCC	2 cut(s)	867, 5978
PspPPI	RGGWCCY	1 cut(s)	3002
PspXI	VCTCGAGB	2 cut(s)	551, 721
PstI	CTGCAG	4 cut(s)	1912, 3175, 3199, 5756
PstNI	CAGNNNCTG	3 cut(s)	1724, 3266, 6113
PvuII	CAGCTG	2 cut(s)	3964, 4996
RruI	TCGCGA	1 cut(s)	750
RseI	CAYNNNNRTG	8 cut(s)	1542, 3051, 3698, 4074, 5286, 5850, 5934, 6051
Rsr2I	CGGWCCG	1 cut(s)	560
RsrII	CGGWCCG	1 cut(s)	560
SacI	GAGCTC	2 cut(s)	762, 2153
SapI	GCTCTTC	1 cut(s)	164
ScaI	AGTACT	3 cut(s)	985, 1699, 4111
SfcI	CTRYAG	8 cut(s)	628, 1785, 1908, 2133, 3171, 3189, 3195, 5752
Sfr274I	CTCGAG	2 cut(s)	551, 721
SfuI	TTCGAA	2 cut(s)	900, 1388
SinI	GGWCC	9 cut(s)	222, 440, 560, 574, 579, 1051, 1228, 3002, 4577
SlaI	CTCGAG	2 cut(s)	551, 721
SmaI	CCCGGG	1 cut(s)	1049
SmiMI	CAYNNNNRTG	8 cut(s)	1542, 3051, 3698, 4074, 5286, 5850, 5934, 6051
SpeI	ACTAGT	3 cut(s)	986, 3686, 5300
SspI	AATATT	2 cut(s)	1867, 5343
SstI	GAGCTC	2 cut(s)	762, 2153
StyI	CCWWGG	8 cut(s)	250, 1521, 2223, 3241, 4917, 5137, 5471, 6078
TaiI	ACGT	8 cut(s)	538, 746, 1587, 2443, 3702, 4204, 5969, 6067
TatI	WGTACW	7 cut(s)	983, 1697, 2101, 3464, 3515, 4109, 5157
TauI	GCSGC	4 cut(s)	423, 598, 651, 654
TseFI	GTSAC	8 cut(s)	1326, 1477, 1642, 2235, 2546, 3857, 3868, 6179
TseI	GCWGC	8 cut(s)	511, 3170, 3194, 3197, 4214, 4412, 5095, 5291
Tsp45I	GTSAC	8 cut(s)	1326, 1477, 1642, 2235, 2546, 3857, 3868, 6179
TspGWI	ACGGA	4 cut(s)	4671, 4992, 5635, 5922
TspMI	CCCGGG	1 cut(s)	1047
Vha464I	CTTAAG	2 cut(s)	4883, 5393
VneI	GTGCAC	1 cut(s)	6126
VpaK11BI	GGWCC	9 cut(s)	222, 440, 560, 574, 579, 1051, 1228, 3002, 4577
VspI	ATTAAT	2 cut(s)	1917, 3504
XbaI	TCTAGA	1 cut(s)	2552
XceI	RCATGY	2 cut(s)	1778, 5849
XcmI	CCANNNNNNNNNTGG	2 cut(s)	4724, 5605
XhoI	CTCGAG	2 cut(s)	551, 721
XmaI	CCCGGG	1 cut(s)	1047
XmiI	GTMKAC	4 cut(s)	51, 2437, 2697, 5121
XmnI	GAANNNNTTC	3 cut(s)	2346, 3809, 5883
ZrmI	AGTACT	3 cut(s)	985, 1699, 4111
Zsp2I	ATGCAT	1 cut(s)	2181

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.