Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0001752

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG390500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 6105 bp

ATGGACCTCCCTCAGTACCTTCACCACCATCCAAGGTACGCTCCTTCCTCCTCCTCCTCTGACCCTAATTTCCCAAACTACCCTCACCGCACCACCAACCACTACCACCACCGCCACACTCCGCCTCCTCCTCCCCCAACCCAGCCCCCACAGCTCCGCCCACAATCCCCCTCCTCCTTCAAATCCCTACCCCCTCCTCCGCCGCCACCACATCCCCAAAGGACCACCTTCTCCCCCCACCCCATCGATTCCGATCATTCCAGAACCTTCTCCCCTCGCACCACTCACCGCCCGCCGCCTCTCGATTCCGACCGGCCACGTCATCGTCTCTACCTCGAGTCCGGTCCGGATTACCGGGACCGGTCCAGGAACTATTCGCCGCGCGATTACGACCGCGAATTGCATAAACCCTATAGGCGCGATCCGGACGGCGGCGGCGCTAGGTTTAGATCGGAGTACGAAGAACAACGGGATCGTCGAGTTGATGACGGTTATCGGCGTCGCTCGAGCAATCACGAAACGACGACGTTTCGCGAAGTGGAGTTCCAGGATTCGGGTTCGGGTTGCTACGACGAGAGCGCGTATGAGGAGCTGTTGAAGAGTGGGAGGAGATATGAGGCGTATGAGATTCAAAGGTGGGGTCTTGAGAGGGCCCAATCGGAGGAGGATTTGTACGATCCTTTCGAATTGGATGAGCACGATGAGGAGGATCGGATTGTTTCGGAGAAGAGGGATTATTATGGTTCCGAATCAGGAAGAAGTAGTAGTACTAGTAGATGGAAGCAGATACAGAAGAAGAGTGCTTTGCTTAGGCTTCAAACGCCGAAAACCCGGGACAGGAATTACTCTGCTTATTATGATAGTTCCGGCTCCGGTGGATCCTTCAGAGGGAAAGAACAGTATGAGTATGAGTATTCAGGTCATGGGAGGAAGGATGCAGTAGAAGAAGAGAGGCGTGGTGGTGGAGGAGAAGAGAGAGGCCAACAACAGAGAGGTGGGAGTAGTCCTCTGGACCTTGATGTTTCGTTTAAGTCGAATTCGCTGGTAGCCAAGCCGGTTAGAACTAGGGATGAGAAGAGAGGTTCAGTTTCGGATATGGATTGTTCAGAGTCACCACCTGCTAAGCCTTGTGAGGATGTTGTCAATTTGGATAGTTTGGCACTTGTTTCCAATAAGACATCGAGTCCTGGCAAGGAGGCCATGAAGTTGAAAGGAGAAGTTACTACTTCTGGCATGAATTCACAGCCTTGTTCTGTTGTGACTGATGATGCGTTTGTAAAGAGTGAAGTGGAAACAGCACCCAAGGCCAAGATTTTACATAAAGATGGCAAGGATGTTGGTTCCAGTCAGAAGTCTTCTCCCAACGTTTCTAAGAAGACAAAAGTAGTGAAGAAAATAGTGGCCAAGAAGACAGTGAAAAAGGTCACAAACCCCCCCACTTCACAGCCAGAAAGTAAGATTGATGAGCCGGGGACGAGTACTGTTCACAGTCTATTTGCAGGCACTGGCAAAGGTGTAACCTCTTCCATTTCTTATCCTTGTCCAAATGATTTGCATGTGTCACCTGTAGATAAGGAAGTAGAAGGTTCTCTGCCGAATGCTCTATCAGATGAATATGGCACTGTTCTCAACTCTTGTAGTAAGAATATTGGGAACAACTCAAGTGCAAATTTGGGCTCTTTGAGTCCTGCAGAGATTAATACTGATCAGAAGCACCCTCTGAATGTAGATACTCCGGTCAAGGGCTTGCTTACCATTTCAAATTTTAACAGCAATGCAACTGATTCAATCAAGGTAGCTACTTGTCCTGAAACTGGTGGTGTTGTGGATGTCAGCAAATCGATCTGTCGGAGTGGAAACATTTTATTGGTTGATAAAGTTGTACAAAAAGAATCATCACAGGCCATGTTGGCTGTAGAGGGCAATTTGAGCTCTGGTTTTTTAAATTCAGATAAGATGCATGAACTCACGAATGTAAAGGGTTCTGAACATGGGGCTGAAACCTTGGAGAAACTGTCACATCAGGAAATCATTGTTCCTGATGTTGGCACTGTGGATGCAGTTAGCGAACAACCTTGTAGATATCAGCTCCCCACATCACTTCAAAATGGTGGTGTTGTGGAAGAACTTCCTAAGGCTATATCTTCAGCAGAAAATAATATGGCGGTTGGTTTATTGAGTTCAGGGGAGACCAAAGCTGTCCGCTCCAAGATTGGTAGACGTACAAGGTGGGATTCTGATGAAGTTTATGTTAAGAAAGATAAGAGCATTACAGTTTCCAATGGTGGGAATACTAATTCTTTTGGCAAGCAGTCATCACCTGATTGTGACTCTAGATCTTTTGAAATTTGTGCCACAGAAAGATCTCTAAATATACCAAAATCAGGTGGAGATACTCATAGTGTTACACCTATGATTCAAAAGAAGAGAAAAGTTAAAACGCAGTTAGACTTTTCAAGGATATCCGACACTTGTGTAGACCCTGTAAATGTTTCTCCCCGCAAAGATGCACCGGATACAACAGTAAGTTCCTTCCTGAAGGATCCTAGTCATGCAGAAGTTTCTGTTTCTGGTGTTCAAAAGTTAGATATGGGATCACAGCCTGGTAATGATTGGGTCAGCGTTCTGAATGGGAAAAGTTCAGTAAATGGGTTTTCTGACACTAAGCTTTCAGCTACAATTGATGCTAACTATGATACAAATGAGACTTCACCCGAGTATTCAAAGAGGAGAAAAGTGTCTGGCACTCATCTGGTATTGACTTCAGCTCAAACCAATGGAGGACCTGCAAATAAATCTACATCTTATATACAGGAATCTTCAACTCATAATGATGTTCCGACATATCAAGCGGACAAAGGTGCTTCTTCTAGCATAGGTTCTCAGTGTGCTACTTCTAATTTAATTCCATCTCCTGAGGAAATCAATGTCTATCTTGAGGACATTATGGCTGCAGTATCATCTGATACTGTAGCTGCAGCTAGGGACTCCTTTACTAATGATGATATGAAGATTAAGCACCAAGGTATTGACTCTTCTTCAGTTTCTGAAGGGTCAGGTATTCCACATATGCAAATCCCTTGTCCTTTACAATCACAGAATGAGGATAAAGAGGATGGTACTGAAGTTATGGTTGTAAATAATCATCACCTTGACATTTTGGATATAGATGGTAGTCATGAAAAAGACTTTGATGTTTGTGCAACAAATGAGCACATTATGGTTCAAGGTGAGACTGCTCCATGTGCAATTCATTCAGAGCTTCAGCCTGCTGATTTGGGTATTAATTCTTTCAGTACAAATATAGAATCAGATTACCTCTGTGTTAAGGATAAACTGCCTTTTGTGCCAAGTTGTCTGCTTTCAATTGCTAATGGCAATGAAGTAACTTCTACCAACTCTATTGATGAAGGCATGAAGTCTGTGTCTGATACGCTGTCAGATACAGGTACTCCAGAAACTTCAACTAGTATCACTGACGTGCATATGCTGATTTGTAATCCTTCGGTTATTAAAAGTTTTGACGAAAAAGTTTGTGCGGATGACCAGAAATTTGAGGTGAAGTCTGAGGTTGCATCCACTGGGAATTTATTCTCAGAGACCAAAACTAATTTAACATTAGATAATGTAACTGAAGGTCACCAATCAGTCACAGAGAAGGCAGTACCTTTGAAATTGCAGGATTCCAAAAAGACATCTCATGGTCTGCATCTCATAAGTGCTGAATCTGCATTGAAGAACCAGCTAGGTCAAGCTACTCATAGGATTGTTCCAGGTCGTCCATTTTCTGCCTTTACTACCTCACAGAAGGCTACCTCTTCAACACATATATCAAAGCCTCGGACTTGGCATCGAAATGCTAATTCATCTGTATCTCCTCTTCCTGTGAGTACTCTTCCACCTCAAAGGCAGTTGCCACAAAGAAATGGAAAACTTGAAAGTAATTCTTATGTTCGTAAAGGTAACACCCTTGTTAGAAGACGTGCTACAATTGCTGCTGTACCACAAATCTCTCAAGGTCTCAGTTCATCTGTTCATCAGTTGAACTTTTCAGGTATAGATGGATTGAAGAAGAATGCAGGATCCGACAGTAGGGTTGACATTAAAAACCCTCCAAGAACAGGAGGACTCAATGCTTCTTCAGATAGGCCCCCAGCCCCACTACCCAGTGGAGTCAAAATGTCTGCATCTGCTGCTGTCTCTTCCGGGATTCCTACATCATCCCCACTAGCTGAGCCTCTTCTTAGTGATATCTCTGGAACTAAATCAGATCCTATGAATTGTTCGGAAACGAAAGATGCAGAAGGATCAGTCAAGGACTCGCTGGCAACTTCTGATACTCAGGAATACCATAGTGGTCCAGTCAACAATCTACATGATGGGAATCTGGCATCTTCAAATATGAAGAAGGTTATATATGTAAAGCGAAAATTAAATCAGTTGGTTGCATCATCTTCAAATCCGTCAGACCTTTCTGTCCACAATGCTGATAAGAACCAACCCTCAGATGGCTACTACAAGAGGCGCAAACATCAGCTAATTAGGTCTTCTTTGGAAAGTAATGGCAAAGATACTGTTCTCCTGCCCACTGACAATATAAACTCAGGGGAGCAAAAGGCTCGTAAGGTTATCCCCAGTAGAACATTTAACAAGAAGCGATCACTTAAGGCTGTTGCGAGGATGAGTAAAAAGAATTCCTTGGTCTGGACACCAAGTGGTTCACAGTCATCAAATAATAATGGTAGTTCATATGACCATCAGAAGGTTCTGCCTCAGCTGTTTCCGTGGAAAAGAGCAAGATACTGGAGAACTGTCATGCAAAGTCAGGCTTCCAATTTCAATTATAGTTCCTCATCAACAATCAGTAAAAAGTTGCTGCTCTCAAGGATGAGGGATACTGTATACACTAGGTCAACCCATGGATTTTCACTTAGAAAGTACAAGGTATTAAGTGTTGGTGGATCTAGTTTAAAATGGTCAAAATCCATTGAAAGTCGCTCAAAGAAAGTTAATGAGGAAGCTACACGGGCTGTTGCTGAAGTAGAGAAGAAGAAAAGAGAACACAATGGTGCTGCCTGCACTAGTTCTGGTTCTAAAATCAGAAACTCACCGGGAAAACGAATATTCCGCATTGGCTCTGTTCGTTACAAAATGGATCCTTCAAGGCGGACACTTAAGAGGATTTCAGATGACGAATCCTCAAAGTCTGTTGTACTGAATCCAGAAACGGATGCCAAGAGATCATATGTTCCAAGGAGATTGGTGATTGGGAATGACGAATATGTGCGGATTGGAAATGGTAATCAGCTTATTAGAGATCCAAAGAAACGAACTCGCATATTGGCAAGTGAAAGAGTTAGATGGAGTTTGCACACTGCCAGACAGCGGTTGGCAAAAAAACGGAAATACTGCCAGTTCTTCACACGATTTGGGAAGTGTAACAAGGATGATGGAAAATGTCCCTATATTCATGACTCCTCCAAAATTGCAGTCTGCACAAAGTATCTGAACGGTTTATGTTCCAACCCCAACTGCAGATTAACCCACAAGGTCATTCCAGAAAGAATGCCAGACTGTTCTTTCTTTCTGCAAGGTTTATGCACCAATAAAAATTGTTCTTACAGACATGTAAATGTAAATCCGAAGGCATCTACTTGTGAAGGATTTCTTAAAGGTTATTGCGCGGACGGAAATGAGTGCCGGAAGAAGCACAGCTATGTCTGCCAGACTTTTGAAGAAACAGGAACGTGTCCTCAAGGGCCCAAATGCAAGCTTCACCACCCCAAAAAGCGTATGAAGGGAAAGATAAAGAAACGATCAAGAGAACATAGAAATGGTTGGGGACGTTACTTTGTTTCCAAGGATGTTGGTGTTTCTGAGCCCGTAACAGCGTCTGCAAAGCACTGTGCACCAAATGGTGATGACATATTTGGTAATGATTTCGTTAGCATCAATGTTAGTGACGAGGAGGCTGGAGAAAGTAACAATCCACCTGAGCAAACCACATTTTATGACAGTGATCCCTCTGAATTAGACTTGGATGATCTTGATGAACTAATTAAACCGGTTCGTTTGTTGAATAAGATGAAGACAAACATTTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005847 GO:0005849 GO:0006139 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0015031 GO:0015833 GO:0015931 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0016973 GO:0031123 GO:0031124 GO:0031503 GO:0031974 GO:0031981 GO:0032991 GO:0033036 GO:0034613 GO:0034641 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045184 GO:0046483 GO:0046907 GO:0050657 GO:0050658 GO:0051028 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0098787 GO:0098789 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

2034

Amino Acids

223.98

Weight (kDa)

8.89

Isoelectric Point (pI)

49.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0001752)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21580 AT1G21580 AT1G21580 AT1G21580 AT1G21580 AT1G21580 AT1G21580 AT1G21580 AT1G21580
fragaria_vesca	FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950
malus_domestica	MD08G1160000.v1.1 MD08G1160100.v1.1 MD08G1160200.v1.1 MD15G1133400.v1.1
prunus_persica	Prupe.1G489000_v2.0.a1 Prupe.1G489000_v2.0.a1 Prupe.1G489000_v2.0.a1
pyrus_communis	pycom08g13490 pycom08g13510
rosa_chinensis	RchiOBHm_Chr6g0296771
rosa_laevigata	RLG00000011660 RLG00000013665
rosa_multiflora	Rmu_ssc0000192.1_g000011
rosa_rugosa	Rorug06G0265800 Rorug06G0265800 Rorug06G0265900 Rorug06G0266000
rosa_samantha	Rh6AG376900 Rh6AG377000 Rh6BG385300 Rh6CG390500 Rh6DG377600
rosa_wichuraiana	Rw6G032950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1126
AasI	GACNNNNNNGTC	1 cut(s)	4475
Acc36I	ACCTGC	2 cut(s)	1126, 2794
AccBSI	CCGCTC	1 cut(s)	2205
AccI	GTMKAC	3 cut(s)	2218, 2478, 4902
AccII	CGCG	7 cut(s)	382, 384, 396, 420, 534, 581, 5684
AccIII	TCCGGA	2 cut(s)	346, 424
AclI	AACGTT	1 cut(s)	1365
AcoI	YGGCCR	2 cut(s)	314, 1401
AcsI	RAATTY	9 cut(s)	1036, 1237, 1669, 1762, 1945, 2346, 3551, 3586, 4693
AcyI	GRCGYC	1 cut(s)	499
AdeI	CACNNNGTG	1 cut(s)	4715
AflII	CTTAAG	2 cut(s)	4664, 5174
AflIII	ACRYGT	2 cut(s)	5626, 5747
AgeI	ACCGGT	2 cut(s)	360, 6064
AhdI	GACNNNNNGTC	1 cut(s)	1182
AhlI	ACTAGT	3 cut(s)	770, 3467, 5081
AjiI	CACGTC	3 cut(s)	320, 3481, 3983
AjnI	CCWGG	5 cut(s)	365, 546, 1186, 2602, 3772
AleI	CACNNNNGTG	2 cut(s)	3479, 5067
Alw21I	GWGCWC	4 cut(s)	699, 1934, 3216, 5911
Alw26I	GTCTC	7 cut(s)	332, 2183, 2699, 3227, 3593, 4025, 4204
Alw44I	GTGCAC	1 cut(s)	5907
AlwNI	CAGNNNCTG	3 cut(s)	1505, 3047, 5894
Ama87I	CYCGRG	4 cut(s)	335, 505, 831, 2714
Aor13HI	TCCGGA	2 cut(s)	346, 424
AoxI	GGCC	9 cut(s)	314, 651, 979, 1197, 1305, 1401, 1902, 4148, 5759
ApaI	GGGCCC	2 cut(s)	655, 5763
ApaLI	GTGCAC	1 cut(s)	5907
ApeKI	GCWGC	7 cut(s)	2951, 2975, 2978, 3995, 4193, 4876, 5072
ApoI	RAATTY	9 cut(s)	1036, 1237, 1669, 1762, 1945, 2346, 3551, 3586, 4693
ArsI	GACNNNNNNTTYG	8 cut(s)	625, 657, 3067, 3099, 3536, 3568, 5475, 5507
AseI	ATTAAT	2 cut(s)	1698, 3285
AsiGI	ACCGGT	2 cut(s)	360, 6064
Asp700I	GAANNNNTTC	3 cut(s)	2127, 3590, 5664
AspLEI	GCGC	6 cut(s)	384, 420, 440, 581, 4527, 5684
AsuC2I	CCSGG	6 cut(s)	356, 832, 833, 1470, 4207, 5112
AsuII	TTCGAA	1 cut(s)	684
AvaI	CYCGRG	4 cut(s)	335, 505, 831, 2714
AvaII	GGWCC	8 cut(s)	4, 222, 344, 358, 363, 1012, 2783, 4358
AxyI	CCTNAGG	2 cut(s)	2133, 2916
BaeGI	GKGCMC	3 cut(s)	655, 5763, 5911
BaeI	ACNNNNGTAYC	6 cut(s)	1722, 1755, 2508, 2541, 3111, 3144
BalI	TGGCCA	1 cut(s)	1403
BamHI	GGATCC	4 cut(s)	878, 2542, 4082, 5155
BanII	GRGCYC	5 cut(s)	655, 1679, 1934, 5763, 5883
BarI	GAAGNNNNNNTAC	8 cut(s)	751, 783, 3019, 3051, 3864, 3896, 3970, 4002
BbsI	GAAGAC	6 cut(s)	1347, 1382, 1415, 3985, 4539, 6095
Bbv12I	GWGCWC	4 cut(s)	699, 1934, 3216, 5911
BbvCI	CCTCAGC	1 cut(s)	4773
BbvI	GCAGC	7 cut(s)	2938, 2962, 2990, 3982, 4180, 4863, 5059
BceAI	ACGGC	1 cut(s)	445
BcgI	CGANNNNNNTGC	2 cut(s)	4601, 4635
BciT130I	CCWGG	5 cut(s)	367, 548, 1188, 2604, 3774
BciVI	GTATCC	2 cut(s)	2509, 4888
BclI	TGATCA	1 cut(s)	1705
BcnI	CCSGG	6 cut(s)	356, 832, 833, 1470, 4207, 5112
BcoDI	GTCTC	7 cut(s)	332, 2183, 2699, 3227, 3593, 4025, 4204
BcuI	ACTAGT	3 cut(s)	770, 3467, 5081
BfmI	CTRYAG	8 cut(s)	412, 1566, 1689, 1914, 2952, 2970, 2976, 5533
BfoI	RGCGCY	1 cut(s)	441
BfrI	CTTAAG	2 cut(s)	4664, 5174
BfuAI	ACCTGC	2 cut(s)	1126, 2794
BfuI	GTATCC	2 cut(s)	2509, 4888
BglI	GCCNNNNNGGC	1 cut(s)	1910
BglII	AGATCT	2 cut(s)	2336, 2363
BlpI	GCTNAGC	2 cut(s)	1122, 4233
BmcAI	AGTACT	3 cut(s)	769, 1480, 3892
Bme18I	GGWCC	8 cut(s)	4, 222, 344, 358, 363, 1012, 2783, 4358
BmeRI	GACNNNNNGTC	1 cut(s)	1182
BmeT110I	CYCGRG	4 cut(s)	335, 505, 831, 2714
BmgBI	CACGTC	3 cut(s)	320, 3481, 3983
BmrI	ACTGGG	3 cut(s)	3591, 4161, 4629
BmuI	ACTGGG	3 cut(s)	3591, 4161, 4629
BpiI	GAAGAC	6 cut(s)	1347, 1382, 1415, 3985, 4539, 6095
BplI	GAGNNNNNCTC	2 cut(s)	991, 1023
BpmI	CTGGAG	3 cut(s)	3438, 4825, 5994
Bpu10I	CCTNAGC	3 cut(s)	809, 4773, 5994
Bpu1102I	GCTNAGC	2 cut(s)	1122, 4233
Bpu14I	TTCGAA	1 cut(s)	684
BpuEI	CTTGAG	6 cut(s)	665, 1645, 2957, 3999, 4867, 5739
BpuMI	CCSGG	6 cut(s)	356, 832, 833, 1470, 4207, 5112
Bsa29I	ATCGAT	2 cut(s)	246, 1841
BsaBI	GATNNNNATC	2 cut(s)	252, 4383
BsaHI	GRCGYC	1 cut(s)	499
BsaI	GGTCTC	3 cut(s)	2183, 3593, 4025
BsaWI	WCCGGW	8 cut(s)	341, 346, 360, 424, 872, 1735, 2512, 6064
BsaXI	ACNNNNNCTCC	8 cut(s)	109, 139, 656, 686, 2000, 2030, 3436, 3466
Bse118I	RCCGGY	4 cut(s)	312, 360, 1054, 6064
Bse1I	ACTGG	9 cut(s)	1344, 1510, 1819, 3586, 4167, 4361, 4635, 4808, 5413
Bse21I	CCTNAGG	2 cut(s)	2133, 2916
Bse3DI	GCAATG	2 cut(s)	1780, 3385
Bse8I	GATNNNNATC	2 cut(s)	252, 4383
BseAI	TCCGGA	2 cut(s)	346, 424
BseBI	CCWGG	5 cut(s)	367, 548, 1188, 2604, 3774
BseCI	ATCGAT	2 cut(s)	246, 1841
BseJI	GATNNNNATC	2 cut(s)	252, 4383
BseMI	GCAATG	2 cut(s)	1780, 3385
BseNI	ACTGG	9 cut(s)	1344, 1510, 1819, 3586, 4167, 4361, 4635, 4808, 5413
BseSI	GKGCMC	3 cut(s)	655, 5763, 5911
BseXI	GCAGC	7 cut(s)	2938, 2962, 2990, 3982, 4180, 4863, 5059
BseYI	CCCAGC	2 cut(s)	141, 4153
BsgI	GTGCAG	2 cut(s)	5062, 5479
Bsh1236I	CGCG	7 cut(s)	382, 384, 396, 420, 534, 581, 5684
Bsh1285I	CGRYCG	2 cut(s)	313, 394
BshFI	GGCC	9 cut(s)	316, 653, 981, 1199, 1307, 1403, 1904, 4150, 5761
BshTI	ACCGGT	2 cut(s)	360, 6064
BshVI	ATCGAT	2 cut(s)	246, 1841
BsiEI	CGRYCG	2 cut(s)	313, 394
BsiHKAI	GWGCWC	4 cut(s)	699, 1934, 3216, 5911
BsiHKCI	CYCGRG	4 cut(s)	335, 505, 831, 2714
BslFI	GGGAC	6 cut(s)	371, 848, 1486, 2999, 5445, 5856
BsmAI	GTCTC	7 cut(s)	332, 2183, 2699, 3227, 3593, 4025, 4204
BsmBI	CGTCTC	1 cut(s)	332
BsmFI	GGGAC	6 cut(s)	371, 848, 1486, 2999, 5445, 5856
BsmI	GAATGC	3 cut(s)	1603, 4081, 5571
BsnI	GGCC	9 cut(s)	316, 653, 981, 1199, 1307, 1403, 1904, 4150, 5761
Bso31I	GGTCTC	3 cut(s)	2183, 3593, 4025
BsoBI	CYCGRG	4 cut(s)	335, 505, 831, 2714
Bsp119I	TTCGAA	1 cut(s)	684
Bsp120I	GGGCCC	2 cut(s)	651, 5759
Bsp1286I	GDGCHC	8 cut(s)	655, 699, 1679, 1934, 3216, 5763, 5883, 5911
Bsp13I	TCCGGA	2 cut(s)	346, 424
Bsp1407I	TGTACA	1 cut(s)	1882
Bsp1720I	GCTNAGC	2 cut(s)	1122, 4233
Bsp19I	CCATGG	1 cut(s)	4918
Bsp68I	TCGCGA	1 cut(s)	534
BspANI	GGCC	9 cut(s)	316, 653, 981, 1199, 1307, 1403, 1904, 4150, 5761
BspDI	ATCGAT	2 cut(s)	246, 1841
BspEI	TCCGGA	2 cut(s)	346, 424
BspFNI	CGCG	7 cut(s)	382, 384, 396, 420, 534, 581, 5684
BspHI	TCATGA	2 cut(s)	3178, 5470
BspMAI	CTGCAG	4 cut(s)	1693, 2956, 2980, 5537
BspMI	ACCTGC	2 cut(s)	1126, 2794
BspT104I	TTCGAA	1 cut(s)	684
BspTI	CTTAAG	2 cut(s)	4664, 5174
BspTNI	GGTCTC	3 cut(s)	2183, 3593, 4025
BsrBI	CCGCTC	1 cut(s)	2205
BsrDI	GCAATG	2 cut(s)	1780, 3385
BsrFI	RCCGGY	4 cut(s)	312, 360, 1054, 6064
BsrGI	TGTACA	1 cut(s)	1882
BsrI	ACTGG	9 cut(s)	1344, 1510, 1819, 3586, 4167, 4361, 4635, 4808, 5413
BssAI	RCCGGY	4 cut(s)	312, 360, 1054, 6064
BssNAI	GTATAC	1 cut(s)	4903
BssNI	GRCGYC	1 cut(s)	499
BssT1I	CCWWGG	8 cut(s)	32, 1302, 2004, 3022, 4698, 4918, 5252, 5859
Bst1107I	GTATAC	1 cut(s)	4903
Bst2UI	CCWGG	5 cut(s)	367, 548, 1188, 2604, 3774
BstACI	GRCGYC	1 cut(s)	499
BstAFI	CTTAAG	2 cut(s)	4664, 5174
BstAPI	GCANNNNNTGC	1 cut(s)	4193
BstAUI	TGTACA	1 cut(s)	1882
BstBI	TTCGAA	1 cut(s)	684
BstC8I	GCNNGC	8 cut(s)	293, 1501, 1748, 2309, 3270, 4326, 5077, 5771
BstDSI	CCRYGG	2 cut(s)	4784, 4918
BstEII	GGTNACC	1 cut(s)	3638
BstFNI	CGCG	7 cut(s)	382, 384, 396, 420, 534, 581, 5684
BstH2I	RGCGCY	1 cut(s)	441
BstHHI	GCGC	6 cut(s)	384, 420, 440, 581, 4527, 5684
BstMAI	GTCTC	7 cut(s)	332, 2183, 2699, 3227, 3593, 4025, 4204
BstMCI	CGRYCG	2 cut(s)	313, 394
BstNI	CCWGG	5 cut(s)	367, 548, 1188, 2604, 3774
BstNSI	RCATGY	2 cut(s)	1559, 5630
BstPI	GGTNACC	1 cut(s)	3638
BstSFI	CTRYAG	8 cut(s)	412, 1566, 1689, 1914, 2952, 2970, 2976, 5533
BstSLI	GKGCMC	3 cut(s)	655, 5763, 5911
BstUI	CGCG	7 cut(s)	382, 384, 396, 420, 534, 581, 5684
BstV1I	GCAGC	7 cut(s)	2938, 2962, 2990, 3982, 4180, 4863, 5059
BstV2I	GAAGAC	6 cut(s)	1347, 1382, 1415, 3985, 4539, 6095
BstX2I	RGATCY	9 cut(s)	878, 2336, 2363, 2542, 4082, 4270, 4961, 5155, 5317
BstYI	RGATCY	9 cut(s)	878, 2336, 2363, 2542, 4082, 4270, 4961, 5155, 5317
BstZ17I	GTATAC	1 cut(s)	4903
Bsu15I	ATCGAT	2 cut(s)	246, 1841
Bsu36I	CCTNAGG	2 cut(s)	2133, 2916
BsuI	GTATCC	2 cut(s)	2509, 4888
BsuRI	GGCC	9 cut(s)	316, 653, 981, 1199, 1307, 1403, 1904, 4150, 5761
BsuTUI	ATCGAT	2 cut(s)	246, 1841
BtgI	CCRYGG	2 cut(s)	4784, 4918
BtrI	CACGTC	3 cut(s)	320, 3481, 3983
BtsI	GCAGTG	1 cut(s)	5373
BtuMI	TCGCGA	1 cut(s)	534
BveI	ACCTGC	2 cut(s)	1126, 2794
Cac8I	GCNNGC	8 cut(s)	293, 1501, 1748, 2309, 3270, 4326, 5077, 5771
CaiI	CAGNNNCTG	3 cut(s)	1505, 3047, 5894
CciI	TCATGA	2 cut(s)	3178, 5470
CfoI	GCGC	6 cut(s)	384, 420, 440, 581, 4527, 5684
Cfr10I	RCCGGY	4 cut(s)	312, 360, 1054, 6064
Cfr9I	CCCGGG	1 cut(s)	831
ClaI	ATCGAT	2 cut(s)	246, 1841
CpoI	CGGWCCG	1 cut(s)	344
CseI	GACGC	2 cut(s)	488, 5880
CspAI	ACCGGT	2 cut(s)	360, 6064
CspI	CGGWCCG	1 cut(s)	344
DraI	TTTAAA	2 cut(s)	1944, 4971
DraIII	CACNNNGTG	1 cut(s)	4715
DrdI	GACNNNNNNGTC	1 cut(s)	4475
DriI	GACNNNNNGTC	1 cut(s)	1182
DseDI	GACNNNNNNGTC	1 cut(s)	4475
EaeI	YGGCCR	2 cut(s)	314, 1401
Eam1105I	GACNNNNNGTC	1 cut(s)	1182
EciI	GGCGGA	4 cut(s)	111, 146, 189, 5182
Ecl136II	GAGCTC	1 cut(s)	1932
Eco130I	CCWWGG	8 cut(s)	32, 1302, 2004, 3022, 4698, 4918, 5252, 5859
Eco24I	GRGCYC	5 cut(s)	655, 1679, 1934, 5763, 5883
Eco31I	GGTCTC	3 cut(s)	2183, 3593, 4025
Eco32I	GATATC	3 cut(s)	2084, 2463, 4252
Eco47I	GGWCC	8 cut(s)	4, 222, 344, 358, 363, 1012, 2783, 4358
Eco53kI	GAGCTC	1 cut(s)	1932
Eco81I	CCTNAGG	2 cut(s)	2133, 2916
Eco88I	CYCGRG	4 cut(s)	335, 505, 831, 2714
Eco91I	GGTNACC	1 cut(s)	3638
EcoICRI	GAGCTC	1 cut(s)	1932
EcoO109I	RGGNCCY	4 cut(s)	651, 2783, 4149, 5759
EcoO65I	GGTNACC	1 cut(s)	3638
EcoRI	GAATTC	3 cut(s)	1036, 1237, 4693
EcoRII	CCWGG	5 cut(s)	365, 546, 1186, 2602, 3772
EcoRV	GATATC	3 cut(s)	2084, 2463, 4252
EcoT14I	CCWWGG	8 cut(s)	32, 1302, 2004, 3022, 4698, 4918, 5252, 5859
EcoT22I	ATGCAT	1 cut(s)	1962
EcoT38I	GRGCYC	5 cut(s)	655, 1679, 1934, 5763, 5883
ErhI	CCWWGG	8 cut(s)	32, 1302, 2004, 3022, 4698, 4918, 5252, 5859
Esp3I	CGTCTC	1 cut(s)	332
FalI	AAGNNNNNCTT	8 cut(s)	3931, 3963, 4682, 4714, 4813, 4845, 5652, 5684
FaqI	GGGAC	6 cut(s)	371, 848, 1486, 2999, 5445, 5856
FauI	CCCGC	2 cut(s)	300, 2507
FauNDI	CATATG	4 cut(s)	3069, 3486, 4750, 5245
FbaI	TGATCA	1 cut(s)	1705
FblI	GTMKAC	3 cut(s)	2218, 2478, 4902
FriOI	GRGCYC	5 cut(s)	655, 1679, 1934, 5763, 5883
GlaI	GCGC	6 cut(s)	383, 419, 439, 580, 4526, 5683
GsaI	CCCAGC	2 cut(s)	145, 4157
GsuI	CTGGAG	3 cut(s)	3438, 4825, 5994
HaeII	RGCGCY	1 cut(s)	441
HaeIII	GGCC	9 cut(s)	316, 653, 981, 1199, 1307, 1403, 1904, 4150, 5761
HgaI	GACGC	2 cut(s)	488, 5880
HhaI	GCGC	6 cut(s)	384, 420, 440, 581, 4527, 5684
Hin1I	GRCGYC	1 cut(s)	499
Hin6I	GCGC	6 cut(s)	382, 418, 438, 579, 4525, 5682
HinP1I	GCGC	6 cut(s)	382, 418, 438, 579, 4525, 5682
HincII	GTYRAC	3 cut(s)	4099, 4366, 4914
HindII	GTYRAC	3 cut(s)	4099, 4366, 4914
HindIII	AAGCTT	2 cut(s)	2666, 5771
Hpy99I	CGWCG	5 cut(s)	480, 504, 526, 529, 575
HpyCH4IV	ACGT	8 cut(s)	319, 527, 1365, 2221, 3480, 3982, 5747, 5845
HpySE526I	ACGT	8 cut(s)	319, 527, 1365, 2221, 3480, 3982, 5747, 5845
Hsp92I	GRCGYC	1 cut(s)	499
HspAI	GCGC	6 cut(s)	382, 418, 438, 579, 4525, 5682
Kpn2I	TCCGGA	2 cut(s)	346, 424
Ksp22I	TGATCA	1 cut(s)	1705
LmnI	GCTCC	8 cut(s)	46, 159, 589, 875, 2094, 2210, 3244, 4609
Lsp1109I	GCAGC	7 cut(s)	2938, 2962, 2990, 3982, 4180, 4863, 5059
MaeII	ACGT	8 cut(s)	319, 527, 1365, 2221, 3480, 3982, 5747, 5845
MbiI	CCGCTC	1 cut(s)	2205
MfeI	CAATTG	3 cut(s)	2679, 3366, 3990
MflI	RGATCY	9 cut(s)	878, 2336, 2363, 2542, 4082, 4270, 4961, 5155, 5317
MhlI	GDGCHC	8 cut(s)	655, 699, 1679, 1934, 3216, 5763, 5883, 5911
MlsI	TGGCCA	1 cut(s)	1403
MluNI	TGGCCA	1 cut(s)	1403
MmeI	TCCRAC	6 cut(s)	333, 1829, 2490, 2864, 4110, 5547
Mox20I	TGGCCA	1 cut(s)	1403
Mph1103I	ATGCAT	1 cut(s)	1962
MroI	TCCGGA	2 cut(s)	346, 424
MroXI	GAANNNNTTC	3 cut(s)	2127, 3590, 5664
MscI	TGGCCA	1 cut(s)	1403
MslI	CAYNNNNRTG	8 cut(s)	1323, 2832, 3479, 3855, 5067, 5631, 5715, 5832
Msp20I	TGGCCA	1 cut(s)	1403
MspA1I	CMGCKG	2 cut(s)	4777, 5386
MspCI	CTTAAG	2 cut(s)	4664, 5174
MunI	CAATTG	3 cut(s)	2679, 3366, 3990
Mva1269I	GAATGC	3 cut(s)	1603, 4081, 5571
MvaI	CCWGG	5 cut(s)	367, 548, 1188, 2604, 3774
MvnI	CGCG	7 cut(s)	382, 384, 396, 420, 534, 581, 5684
NciI	CCSGG	6 cut(s)	356, 832, 833, 1470, 4207, 5112
NcoI	CCATGG	1 cut(s)	4918
NdeI	CATATG	4 cut(s)	3069, 3486, 4750, 5245
NmuCI	GTSAC	9 cut(s)	1110, 1258, 1423, 1560, 2016, 2327, 3638, 3649, 5960
NruI	TCGCGA	1 cut(s)	534
NsiI	ATGCAT	1 cut(s)	1962
NspI	RCATGY	2 cut(s)	1559, 5630
NspV	TTCGAA	1 cut(s)	684
OliI	CACNNNNGTG	2 cut(s)	3479, 5067
PaeR7I	CTCGAG	2 cut(s)	335, 505
PagI	TCATGA	2 cut(s)	3178, 5470
PaqCI	CACCTGC	1 cut(s)	1126
PciI	ACATGT	1 cut(s)	5626
PcsI	WCGNNNNNNNCGW	3 cut(s)	475, 681, 1031
PctI	GAATGC	3 cut(s)	1603, 4081, 5571
PdmI	GAANNNNTTC	3 cut(s)	2127, 3590, 5664
PfoI	TCCNGGA	3 cut(s)	365, 546, 4205
PinAI	ACCGGT	2 cut(s)	360, 6064
PpuMI	RGGWCCY	1 cut(s)	2783
PscI	ACATGT	1 cut(s)	5626
PshBI	ATTAAT	2 cut(s)	1698, 3285
Psp124BI	GAGCTC	1 cut(s)	1934
Psp1406I	AACGTT	1 cut(s)	1365
Psp5II	RGGWCCY	1 cut(s)	2783
Psp6I	CCWGG	5 cut(s)	365, 546, 1186, 2602, 3772
PspEI	GGTNACC	1 cut(s)	3638
PspFI	CCCAGC	2 cut(s)	141, 4153
PspGI	CCWGG	5 cut(s)	365, 546, 1186, 2602, 3772
PspOMI	GGGCCC	2 cut(s)	651, 5759
PspPPI	RGGWCCY	1 cut(s)	2783
PspXI	VCTCGAGB	2 cut(s)	335, 505
PstI	CTGCAG	4 cut(s)	1693, 2956, 2980, 5537
PstNI	CAGNNNCTG	3 cut(s)	1505, 3047, 5894
PsuI	RGATCY	9 cut(s)	878, 2336, 2363, 2542, 4082, 4270, 4961, 5155, 5317
PvuII	CAGCTG	1 cut(s)	4777
RruI	TCGCGA	1 cut(s)	534
RseI	CAYNNNNRTG	8 cut(s)	1323, 2832, 3479, 3855, 5067, 5631, 5715, 5832
Rsr2I	CGGWCCG	1 cut(s)	344
RsrII	CGGWCCG	1 cut(s)	344
SacI	GAGCTC	1 cut(s)	1934
ScaI	AGTACT	3 cut(s)	769, 1480, 3892
SduI	GDGCHC	8 cut(s)	655, 699, 1679, 1934, 3216, 5763, 5883, 5911
SfcI	CTRYAG	8 cut(s)	412, 1566, 1689, 1914, 2952, 2970, 2976, 5533
Sfr274I	CTCGAG	2 cut(s)	335, 505
SfuI	TTCGAA	1 cut(s)	684
SinI	GGWCC	8 cut(s)	4, 222, 344, 358, 363, 1012, 2783, 4358
SlaI	CTCGAG	2 cut(s)	335, 505
SmaI	CCCGGG	1 cut(s)	833
SmiMI	CAYNNNNRTG	8 cut(s)	1323, 2832, 3479, 3855, 5067, 5631, 5715, 5832
SpeI	ACTAGT	3 cut(s)	770, 3467, 5081
SspI	AATATT	2 cut(s)	1648, 5124
SstI	GAGCTC	1 cut(s)	1934
StyI	CCWWGG	8 cut(s)	32, 1302, 2004, 3022, 4698, 4918, 5252, 5859
TaiI	ACGT	8 cut(s)	322, 530, 1368, 2224, 3483, 3985, 5750, 5848
TatI	WGTACW	7 cut(s)	767, 1478, 1882, 3296, 3890, 4938, 5212
TauI	GCSGC	5 cut(s)	205, 298, 382, 435, 438
TseFI	GTSAC	9 cut(s)	1110, 1258, 1423, 1560, 2016, 2327, 3638, 3649, 5960
TseI	GCWGC	7 cut(s)	2951, 2975, 2978, 3995, 4193, 4876, 5072
Tsp45I	GTSAC	9 cut(s)	1110, 1258, 1423, 1560, 2016, 2327, 3638, 3649, 5960
TspGWI	ACGGA	5 cut(s)	4452, 4773, 5243, 5416, 5703
TspMI	CCCGGG	1 cut(s)	831
Vha464I	CTTAAG	2 cut(s)	4664, 5174
VneI	GTGCAC	1 cut(s)	5907
VpaK11BI	GGWCC	8 cut(s)	4, 222, 344, 358, 363, 1012, 2783, 4358
VspI	ATTAAT	2 cut(s)	1698, 3285
XapI	RAATTY	9 cut(s)	1036, 1237, 1669, 1762, 1945, 2346, 3551, 3586, 4693
XbaI	TCTAGA	1 cut(s)	2333
XceI	RCATGY	2 cut(s)	1559, 5630
XcmI	CCANNNNNNNNNTGG	2 cut(s)	4505, 5386
XhoI	CTCGAG	2 cut(s)	335, 505
XmaI	CCCGGG	1 cut(s)	831
XmiI	GTMKAC	3 cut(s)	2218, 2478, 4902
XmnI	GAANNNNTTC	3 cut(s)	2127, 3590, 5664
ZrmI	AGTACT	3 cut(s)	769, 1480, 3892
Zsp2I	ATGCAT	1 cut(s)	1962

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.