Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0001752

Physical Location & Seq

Genomic Coordinates Forward (+)

57564430 .. 57569208

Gene Structure 4779 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG376900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4779 bp

ATGGACCTCCCTCAGTACCTTCACCACCATCCAAGGTACGCTCCTTCCTCCTCCTCCTCTGACCCTAATTTCCCAAACTACCCTCACCGCACCACCAACCACTACCACCACCGCCACACTCCGCCTCCTCCTCCCCCAACCCAGCCCCCACAGCTCCGCTCACAATCCCCCTCCTCCTTCAAATCCCTACCCCCTCCTCCGCCGCCACCACATCCCCAAAGGACCACCTTCTCCCCCCACCCCATCGATTCCGATCATTCCAGAACCTTCTCCCCTCGCACCACTCATCGCCCGCCGCCTCTCGATTCCGACCGGCCACGTCATCGCCTCTACCTCGAGTCCGGTCCGGATTACCGGGACCGATCCAGGAACTATTCGCCGCGCGATTACGACCGCGAATTGCATAAACCCTATAGGCGCGATCCGGACGGCGGCGCTAGGTTTAGATCGGAGTACGAAGAACAACGGGATCGTCGAGTTGATGACGGTTATCGCCGTCGCTCGAGCAATCACGAAACGACGACGTTTCGCGAAGTGGAGTTCCAGGATTCGGGTTCGGGTTGCTACGACGAGAGCGCGTATGAGGAGCTGTTGAAGAGTGGGAGGAGATATGAGGCGTATGAGATTCAAAGGTGGGGTCTTGAGAGGGCCCAATCGGAGGAGGATTTGTACGATCCTTTCGAATTGGATGAGCACGATGAGGAGGATCGGATTGTTTCGGAGACGAGGGATTATTATGGTTCCGAATCAGGAAGAAGTAGTAGTACTAGTAGATGGAAGCAGATACAAAAGAAGAGTGCCTTGCTTAGGCTTCAAACGCCGAAAACCCGGGACAGGAATTACTCTGCTTATTATGATAGTTCCGGCTCCGGTGGATCGTTCAGAGGGAAAGAACAGTATGAGTATGAGTATTCAGGTCATGGGAGGAAGGATGCAGTAGAAGAAGAGAGGCGTGGTGGTGGAGGAGAAGAGAGAGGCCAACAACAGAGAGGTGGGACTAGTCCTCTGGACCTTGATGTTTCGTTTAAGTCGAATTCGCTGGTAGCCAAGCCGGTTAGAACTAGGGATGAGAAGAGAGGTTCAGTTTCAGATATGGATTGTTCAGAGTCACCACCTGCTAAGCCTTGTGAGGATGTTGTAAATTTGGATAGTTTGGCACTTGTTTCGAATAAGACATCGACTCCTGGCAAGGAGGCCATGAAGTTGAAAGGAGAAGTTACTACTTCTGGCATGAATTCACAGCCTTGTTCTGTTGTGACTGATGATGCGTTTGTAAAGAGTGAAGTGGAAACAGCACCCAAGGGCAAGATTTTACATAAAGATGCCAAGGATGTTGGTTCCAGTCAGAAGTCTTCTCCCAACGTTTCTAAGAAGACAAAAGTAGTGAAGAAAATAGTGGCCAAGAAGACAGTGAAAAAGGTCACAAACCCCCCCACTTCACAGCCAGAAAGTAAGATTGATGAGCCGGGGACGAGTACTGTTCACAGTCTATTTGCAGGCACTGGCAAAGGTGAAACCTCTTCCATTTCTGATCCTTGTCCAGATGATTTGCATGTGTTGCCTGTAGATAAGGAAGTAGAACGTTCTCTGCCGAATGTTCTGTCAGATGAATATGGCACTGTTCTCAACTCTTGTAGTAAGAATATTGGGAACAACTCAAGTGCAAATTTGGCCTCTTTGAGTCCTGCAGAGATTAATACTGATCAGAAGCACCCTCTGAATGTAGATACTCCGGTCAAGGGCTTGCTTACCATTTCAAATTTTAACAGCAATGCAACTGATTCAATCAAGGTAGCTACTTTTCCTGAAACTGGCGGTGTCATGGATGTCAGCAAATCGATCTGTCAGAGTGGAAACATTTTATTGGTTGATAAAGTTGTACAAAAAGAATCATCACAGGCCATGTTGGCTGTAGAAGGCAATTTGAGCTCTGATTTTTTAAATTCAGATAAGATGCATGAACTCACGAATGTAAAGGGTTCTGAACATGGGGCTGAAACCTTGGAGAAACTGTCACATCAGGAAATCATTGTTCCTGATGTTGACACTGTGGATGCAGTTAGCGAACAACCTTGTAGATATCAGCTCCCCACATCACTTCAAAATGGTGGTGTTGTGGAAGAACTTCCTAAGGCTATATCTTCAGCAGAAAATAATATGGCGGTTGGTTTATCGAGTTCAGGGGAGACCAAAGCTGTCCGCTCCAAGATTGGTAGACGTACAAGGTGGGATTCTGATGAAGTTTATGTTAAGAAAGATAAGAGCATTACAGTTTCCAATGGTGGGAATACTAATTCTTTTGGCAAGCAGTCATTACCTGATTGTGACTCTAGATCTTTTGAAATTTGTGCCACAGAAAGATCTCCAAATATATCAAAATCAGTTGGAGATACTCATAGTGTTACACCTATGATTCAAAAGAAGAGAAAAGTTAAAACGCAGTTAGACTTTTCAAGGATATCCGACACTTGTGTAGACCCTGTAAATGTTTCTCCCCGCAAAGATGCACCGGATACAACAGTAAGTTCCTTCCTGAAGGATCCTAGTCATGCAGAAGTTTCTGTTTCTGGTGTTCAAAAGTTAGATATGGGATCACAGCCTGGTAATGATTGGGTCTGCGTTCTGAATGGGAAAAGTTCAGTAAATGGGTTTTCTGACACTAAGCTTTCAGCTAGAATTGATGCTAACTATGATACAAATGAGACTTCACCTGAGTATTTAAAGAGGAGAAAAGTGTCTGGCGCTCATCTGGTATTGACTTCAGCTCAAACCAATGGAGGACCTGCAAATAAATCTACATCTTATATACAGGAATCTTCAACTCATAATGATGTTCCAACATATCAAGCGGACAAAGGTGCTTCTTCTAGCATAGGTTCTCAGTGTGCTACTTCTAATTTAATTCCATCTCCTGAGGAAATCAATGTCTATCTTGAGGACATTATGGCTGCAGTATCATCTGATACTGTAGCTGCAGCTAGGGACTCCTTTACTAATGATGATATGAAGATTAAGCACCAAGGTATTGACTCTTCTTCAGTTTCTGAAGGGTCAGGTATTCCACATATGCAAATCCCTTGTCCTTTACAATCACAGAATGAGGATAAAGAGGATGGTACTGAAGTTATGGTTGTAAATAATCATCACCTTGACATTTTGGATATAGATGGTAGTCATGAAAAAGACTTTGATGTTTGTGCAACAAATGAGCACATTATGGTTCAAGGTGAGACTGCTCCATGTACAACTCATTCAGAGCTTCAGCCTGCTGATTTGGGTATTAATTCTTTCAGTACAAATATAGAATCAGATTACCTCTGTGTTAAGGATAAACTGCCTTTTGTGCCAAGTTGTCTGCTTTCAATTGCTAATGGTAATGAAGTAACTTCTACCAACTCTATTGATGAAGGCATGAAGTCTGTGTCTGATACGCTGTCAGATACAGGTACTCCAGAAACTTCAACTAGTATCACTGACGTGCATATGCTGATTTGTAATCCTTCGGTTATTAAAAGTTTTGACGAAAAAGTTTGTGCGGATGACCAGAAATTTGAGGTGAAGTCTGAGGTTGCATCCGCTGGGAATTTATTCTCAGAGACCAAAACTAATTTAACATTAGATAATGTAACTGAAGGTCACCAATCAGTCACAGAGAAGGCAGTACCTTTGAAATTGCAGGATTCCAAAAAGACATCTCATGGTCTGCATCTCATAAGTGCTGAATCTGCATTGAAGAACCAGCTGGGTCAAGCTAGTCATAGGATTGTTCCAGGTCGTCCATTTTCTGCCTTTACTACCTCACAGAAGGCTACCTCTTCAGCACATATATCAAAGCCTCGGACTTGGCATCGAAATGCTAATTCATCTGTATCTCCTCTTCCTGTGAGTACTCTTCCACCTCAAAGGCAGTTGCCACAAAGAAATGAAAAACTTGAAAGTAATTCTTATGTTCGTAAAGGTAACACTCTTGTTAGAAGACGTGCTACAATTGCTGCTGTACCACAAAGCTCTCAAGGTCTCAGTTCATCTGTTCATCAGTTGAACTTTTCAGGTATAGATGGATTGAAGAAGAATGCAGGATCCGACAGTAGGGTTGACATTAAAAACCCTCCAAGAACAGGAGGACTCAATGCTTCTTCAGATAGGCCCCCTGCCCCACTACCCAGTGGAGTCAAAATGTCTGCATCTGCCGGCGTCTCTTCCGGGATTCCTACATCATCCCCACTAGCTGAGCCTCTTCTTAGTGATATCTCTGGAACTAAATCAGATCCTATGAATTGTTCGGAAACGAAAGATGCAGAAGGATCAATCAAGGACTCGCTGGCAACTTCTGATACTCAGGAATACCATAGTGGTCCAGTCAACAATCTACATGATGGGAATCTGGCATCTTCAAATATGAAGAAGGTTATATATGTAAAGCGAAAATTAAATCAGTTGGTTGCATCATCTTCAAATCCGTCAGACCTTTCTGTCCACAATGTTGATAAGAACCAACCCTCAGATGGCTACTACAAGAGGCGCAAACATCAGCTAATTAGGTCTTCTTTGGAAAGTAATGGCAAAGAAACTGTTCTCCTGCCCACTGACAATCTAAACTCAGGGGAGCAAAAGGCTCGTAAGGTTATCCCCAGTAGAACATTTAACAAGAAGCGATCACTTAAGGGTATGCTATTTGAACTTGTCCAATTAGTCGTTGGTAAGCAATATTATCTTTTATATAGACGAAAGATGCAATCAACAAAAGTTCTGACATGCATTTGCTGCATCAGGGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005847 GO:0005849 GO:0006139 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0015031 GO:0015833 GO:0015931 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0016973 GO:0031123 GO:0031124 GO:0031503 GO:0031974 GO:0031981 GO:0032991 GO:0033036 GO:0034613 GO:0034641 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045184 GO:0046483 GO:0046907 GO:0050657 GO:0050658 GO:0051028 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0098787 GO:0098789 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1592

Amino Acids

174.36

Weight (kDa)

6.45

Isoelectric Point (pI)

49.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001752)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21580 AT1G21580 AT1G21580 AT1G21580 AT1G21580 AT1G21580 AT1G21580 AT1G21580 AT1G21580
fragaria_vesca	FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950 FvH4_2g27950
malus_domestica	MD08G1160000.v1.1 MD08G1160100.v1.1 MD08G1160200.v1.1 MD15G1133400.v1.1
prunus_persica	Prupe.1G489000_v2.0.a1 Prupe.1G489000_v2.0.a1 Prupe.1G489000_v2.0.a1
pyrus_communis	pycom08g13490 pycom08g13510
rosa_chinensis	RchiOBHm_Chr6g0296771
rosa_laevigata	RLG00000011660 RLG00000013665
rosa_multiflora	Rmu_ssc0000192.1_g000011
rosa_rugosa	Rorug06G0265800 Rorug06G0265800 Rorug06G0265900 Rorug06G0266000
rosa_samantha	Rh6AG376900 Rh6AG377000 Rh6BG385300 Rh6CG390500 Rh6DG377600
rosa_wichuraiana	Rw6G032950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1123
AasI	GACNNNNNNGTC	1 cut(s)	4472
Acc36I	ACCTGC	2 cut(s)	1123, 2791
AccBSI	CCGCTC	2 cut(s)	159, 2202
AccI	GTMKAC	2 cut(s)	2215, 2475
AccII	CGCG	6 cut(s)	382, 384, 396, 420, 531, 578
AccIII	TCCGGA	2 cut(s)	346, 424
AclI	AACGTT	2 cut(s)	1362, 1582
AcoI	YGGCCR	2 cut(s)	314, 1398
AcsI	RAATTY	9 cut(s)	1033, 1141, 1234, 1666, 1759, 1942, 2343, 3548, 3583
AcyI	GRCGYC	1 cut(s)	4194
AflII	CTTAAG	1 cut(s)	4661
AhlI	ACTAGT	3 cut(s)	767, 998, 3464
AjiI	CACGTC	3 cut(s)	320, 3478, 3980
AjnI	CCWGG	5 cut(s)	365, 543, 1183, 2599, 3769
AleI	CACNNNNGTG	1 cut(s)	3476
Alw21I	GWGCWC	3 cut(s)	696, 1931, 3213
Alw26I	GTCTC	7 cut(s)	716, 2180, 2696, 3224, 3590, 4022, 4201
AlwNI	CAGNNNCTG	2 cut(s)	1502, 3044
Ama87I	CYCGRG	3 cut(s)	335, 502, 828
Aor13HI	TCCGGA	2 cut(s)	346, 424
AoxI	GGCC	8 cut(s)	314, 648, 976, 1194, 1398, 1671, 1899, 4145
ApaI	GGGCCC	1 cut(s)	652
ApeKI	GCWGC	5 cut(s)	2948, 2972, 2975, 3992, 4764
ApoI	RAATTY	9 cut(s)	1033, 1141, 1234, 1666, 1759, 1942, 2343, 3548, 3583
ArsI	GACNNNNNNTTYG	8 cut(s)	622, 654, 1586, 1618, 3064, 3096, 3533, 3565
AseI	ATTAAT	2 cut(s)	1695, 3282
Asp700I	GAANNNNTTC	3 cut(s)	2124, 3587, 4572
AspLEI	GCGC	6 cut(s)	384, 420, 437, 578, 2744, 4524
AsuC2I	CCSGG	5 cut(s)	356, 829, 830, 1467, 4204
AsuHPI	GGTGA	9 cut(s)	14, 77, 1101, 1523, 2700, 3137, 3239, 3568, 3629
AsuII	TTCGAA	2 cut(s)	681, 1166
AvaI	CYCGRG	3 cut(s)	335, 502, 828
AvaII	GGWCC	7 cut(s)	4, 222, 344, 358, 1009, 2780, 4355
AxyI	CCTNAGG	2 cut(s)	2130, 2913
BaeGI	GKGCMC	1 cut(s)	652
BaeI	ACNNNNGTAYC	6 cut(s)	1719, 1752, 2505, 2538, 3108, 3141
BalI	TGGCCA	1 cut(s)	1400
BamHI	GGATCC	2 cut(s)	2539, 4079
BanII	GRGCYC	2 cut(s)	652, 1931
BarI	GAAGNNNNNNTAC	8 cut(s)	748, 780, 3016, 3048, 3861, 3893, 3967, 3999
BbsI	GAAGAC	5 cut(s)	1344, 1379, 1412, 3982, 4536
Bbv12I	GWGCWC	3 cut(s)	696, 1931, 3213
BbvI	GCAGC	5 cut(s)	2935, 2959, 2987, 3979, 4751
BccI	CCATC	9 cut(s)	36, 251, 768, 2914, 3107, 3161, 4052, 4370, 4499
BceAI	ACGGC	2 cut(s)	445, 480
BcgI	CGANNNNNNTGC	4 cut(s)	1146, 1180, 4598, 4632
BciT130I	CCWGG	5 cut(s)	367, 545, 1185, 2601, 3771
BciVI	GTATCC	1 cut(s)	2506
BclI	TGATCA	1 cut(s)	1702
BcnI	CCSGG	5 cut(s)	356, 829, 830, 1467, 4204
BcoDI	GTCTC	7 cut(s)	716, 2180, 2696, 3224, 3590, 4022, 4201
BcuI	ACTAGT	3 cut(s)	767, 998, 3464
BfmI	CTRYAG	7 cut(s)	412, 1563, 1686, 1911, 2949, 2967, 2973
BfoI	RGCGCY	2 cut(s)	438, 2745
BfrI	CTTAAG	1 cut(s)	4661
BfuAI	ACCTGC	2 cut(s)	1123, 2791
BfuI	GTATCC	1 cut(s)	2506
BglI	GCCNNNNNGGC	1 cut(s)	1907
BglII	AGATCT	2 cut(s)	2333, 2360
BisI	GCNGC	9 cut(s)	203, 296, 380, 433, 2949, 2973, 2976, 3993, 4765
BlpI	GCTNAGC	2 cut(s)	1119, 4230
BlsI	GCNGC	9 cut(s)	204, 297, 381, 434, 2950, 2974, 2977, 3994, 4766
BmcAI	AGTACT	3 cut(s)	766, 1477, 3889
Bme18I	GGWCC	7 cut(s)	4, 222, 344, 358, 1009, 2780, 4355
BmeT110I	CYCGRG	3 cut(s)	335, 502, 828
BmgBI	CACGTC	3 cut(s)	320, 3478, 3980
BmiI	GGNNCC	8 cut(s)	359, 650, 742, 868, 1339, 2541, 4081, 4148
BmrI	ACTGGG	2 cut(s)	4158, 4626
BmuI	ACTGGG	2 cut(s)	4158, 4626
BpiI	GAAGAC	5 cut(s)	1344, 1379, 1412, 3982, 4536
BpmI	CTGGAG	1 cut(s)	3435
Bpu10I	CCTNAGC	1 cut(s)	806
Bpu1102I	GCTNAGC	2 cut(s)	1119, 4230
Bpu14I	TTCGAA	2 cut(s)	681, 1166
BpuEI	CTTGAG	4 cut(s)	662, 1642, 2954, 3996
BpuMI	CCSGG	5 cut(s)	356, 829, 830, 1467, 4204
Bsa29I	ATCGAT	2 cut(s)	246, 1838
BsaBI	GATNNNNATC	2 cut(s)	252, 4380
BsaHI	GRCGYC	1 cut(s)	4194
BsaI	GGTCTC	3 cut(s)	2180, 3590, 4022
BsaJI	CCNNGG	8 cut(s)	32, 828, 1299, 1326, 1466, 2001, 3019, 3836
BsaWI	WCCGGW	6 cut(s)	341, 346, 424, 869, 1732, 2509
Bse118I	RCCGGY	3 cut(s)	312, 1051, 4190
Bse1I	ACTGG	6 cut(s)	1341, 1507, 1816, 4164, 4358, 4632
Bse21I	CCTNAGG	2 cut(s)	2130, 2913
Bse3DI	GCAATG	1 cut(s)	1777
Bse8I	GATNNNNATC	2 cut(s)	252, 4380
BseAI	TCCGGA	2 cut(s)	346, 424
BseBI	CCWGG	5 cut(s)	367, 545, 1185, 2601, 3771
BseCI	ATCGAT	2 cut(s)	246, 1838
BseDI	CCNNGG	8 cut(s)	32, 828, 1299, 1326, 1466, 2001, 3019, 3836
BseJI	GATNNNNATC	2 cut(s)	252, 4380
BseMI	GCAATG	1 cut(s)	1777
BseNI	ACTGG	6 cut(s)	1341, 1507, 1816, 4164, 4358, 4632
BseSI	GKGCMC	1 cut(s)	652
BseXI	GCAGC	5 cut(s)	2935, 2959, 2987, 3979, 4751
BseYI	CCCAGC	3 cut(s)	141, 3578, 3742
Bsh1236I	CGCG	6 cut(s)	382, 384, 396, 420, 531, 578
Bsh1285I	CGRYCG	2 cut(s)	313, 394
BshFI	GGCC	8 cut(s)	316, 650, 978, 1196, 1400, 1673, 1901, 4147
BshVI	ATCGAT	2 cut(s)	246, 1838
BsiEI	CGRYCG	2 cut(s)	313, 394
BsiHKAI	GWGCWC	3 cut(s)	696, 1931, 3213
BsiHKCI	CYCGRG	3 cut(s)	335, 502, 828
BslFI	GGGAC	5 cut(s)	371, 845, 1009, 1483, 2996
BsmAI	GTCTC	7 cut(s)	716, 2180, 2696, 3224, 3590, 4022, 4201
BsmBI	CGTCTC	2 cut(s)	716, 4201
BsmFI	GGGAC	5 cut(s)	371, 845, 1009, 1483, 2996
BsmI	GAATGC	1 cut(s)	4078
BsnI	GGCC	8 cut(s)	316, 650, 978, 1196, 1400, 1673, 1901, 4147
Bso31I	GGTCTC	3 cut(s)	2180, 3590, 4022
BsoBI	CYCGRG	3 cut(s)	335, 502, 828
Bsp119I	TTCGAA	2 cut(s)	681, 1166
Bsp120I	GGGCCC	1 cut(s)	648
Bsp1286I	GDGCHC	4 cut(s)	652, 696, 1931, 3213
Bsp13I	TCCGGA	2 cut(s)	346, 424
Bsp1407I	TGTACA	2 cut(s)	1879, 3242
Bsp1720I	GCTNAGC	2 cut(s)	1119, 4230
Bsp68I	TCGCGA	1 cut(s)	531
BspANI	GGCC	8 cut(s)	316, 650, 978, 1196, 1400, 1673, 1901, 4147
BspDI	ATCGAT	2 cut(s)	246, 1838
BspEI	TCCGGA	2 cut(s)	346, 424
BspFNI	CGCG	6 cut(s)	382, 384, 396, 420, 531, 578
BspHI	TCATGA	1 cut(s)	3175
BspLI	GGNNCC	8 cut(s)	359, 650, 742, 868, 1339, 2541, 4081, 4148
BspMAI	CTGCAG	3 cut(s)	1690, 2953, 2977
BspMI	ACCTGC	2 cut(s)	1123, 2791
BspT104I	TTCGAA	2 cut(s)	681, 1166
BspTI	CTTAAG	1 cut(s)	4661
BspTNI	GGTCTC	3 cut(s)	2180, 3590, 4022
BsrBI	CCGCTC	2 cut(s)	159, 2202
BsrDI	GCAATG	1 cut(s)	1777
BsrFI	RCCGGY	3 cut(s)	312, 1051, 4190
BsrGI	TGTACA	2 cut(s)	1879, 3242
BsrI	ACTGG	6 cut(s)	1341, 1507, 1816, 4164, 4358, 4632
BssAI	RCCGGY	3 cut(s)	312, 1051, 4190
BssECI	CCNNGG	8 cut(s)	32, 828, 1299, 1326, 1466, 2001, 3019, 3836
BssNI	GRCGYC	1 cut(s)	4194
BssT1I	CCWWGG	5 cut(s)	32, 1299, 1326, 2001, 3019
Bst2UI	CCWGG	5 cut(s)	367, 545, 1185, 2601, 3771
BstACI	GRCGYC	1 cut(s)	4194
BstAFI	CTTAAG	1 cut(s)	4661
BstAPI	GCANNNNNTGC	2 cut(s)	1558, 4764
BstAUI	TGTACA	2 cut(s)	1879, 3242
BstBI	TTCGAA	2 cut(s)	681, 1166
BstC8I	GCNNGC	7 cut(s)	293, 1498, 1745, 2306, 3267, 4192, 4323
BstEII	GGTNACC	1 cut(s)	3635
BstENI	CCTNNNNNAGG	1 cut(s)	805
BstFNI	CGCG	6 cut(s)	382, 384, 396, 420, 531, 578
BstH2I	RGCGCY	2 cut(s)	438, 2745
BstHHI	GCGC	6 cut(s)	384, 420, 437, 578, 2744, 4524
BstMAI	GTCTC	7 cut(s)	716, 2180, 2696, 3224, 3590, 4022, 4201
BstMCI	CGRYCG	2 cut(s)	313, 394
BstNI	CCWGG	5 cut(s)	367, 545, 1185, 2601, 3771
BstNSI	RCATGY	2 cut(s)	1556, 4758
BstPI	GGTNACC	1 cut(s)	3635
BstSFI	CTRYAG	7 cut(s)	412, 1563, 1686, 1911, 2949, 2967, 2973
BstSLI	GKGCMC	1 cut(s)	652
BstUI	CGCG	6 cut(s)	382, 384, 396, 420, 531, 578
BstV1I	GCAGC	5 cut(s)	2935, 2959, 2987, 3979, 4751
BstV2I	GAAGAC	5 cut(s)	1344, 1379, 1412, 3982, 4536
BstX2I	RGATCY	5 cut(s)	2333, 2360, 2539, 4079, 4267
BstYI	RGATCY	5 cut(s)	2333, 2360, 2539, 4079, 4267
Bsu15I	ATCGAT	2 cut(s)	246, 1838
Bsu36I	CCTNAGG	2 cut(s)	2130, 2913
BsuI	GTATCC	1 cut(s)	2506
BsuRI	GGCC	8 cut(s)	316, 650, 978, 1196, 1400, 1673, 1901, 4147
BsuTUI	ATCGAT	2 cut(s)	246, 1838
BtgZI	GCGATG	2 cut(s)	272, 308
BtrI	CACGTC	3 cut(s)	320, 3478, 3980
BtsIMutI	CAGTG	8 cut(s)	1416, 1500, 1617, 2046, 2888, 3471, 4171, 4584
BtuMI	TCGCGA	1 cut(s)	531
BveI	ACCTGC	2 cut(s)	1123, 2791
Cac8I	GCNNGC	7 cut(s)	293, 1498, 1745, 2306, 3267, 4192, 4323
CaiI	CAGNNNCTG	2 cut(s)	1502, 3044
CciI	TCATGA	1 cut(s)	3175
CfoI	GCGC	6 cut(s)	384, 420, 437, 578, 2744, 4524
Cfr10I	RCCGGY	3 cut(s)	312, 1051, 4190
Cfr9I	CCCGGG	1 cut(s)	828
ClaI	ATCGAT	2 cut(s)	246, 1838
CpoI	CGGWCCG	1 cut(s)	344
CseI	GACGC	1 cut(s)	4183
CspI	CGGWCCG	1 cut(s)	344
DraI	TTTAAA	2 cut(s)	1941, 2721
DrdI	GACNNNNNNGTC	1 cut(s)	4472
DseDI	GACNNNNNNGTC	1 cut(s)	4472
EaeI	YGGCCR	2 cut(s)	314, 1398
EciI	GGCGGA	2 cut(s)	111, 189
Ecl136II	GAGCTC	1 cut(s)	1929
Eco130I	CCWWGG	5 cut(s)	32, 1299, 1326, 2001, 3019
Eco24I	GRGCYC	2 cut(s)	652, 1931
Eco31I	GGTCTC	3 cut(s)	2180, 3590, 4022
Eco32I	GATATC	3 cut(s)	2081, 2460, 4249
Eco47I	GGWCC	7 cut(s)	4, 222, 344, 358, 1009, 2780, 4355
Eco53kI	GAGCTC	1 cut(s)	1929
Eco81I	CCTNAGG	2 cut(s)	2130, 2913
Eco88I	CYCGRG	3 cut(s)	335, 502, 828
Eco91I	GGTNACC	1 cut(s)	3635
EcoICRI	GAGCTC	1 cut(s)	1929
EcoNI	CCTNNNNNAGG	1 cut(s)	805
EcoO109I	RGGNCCY	3 cut(s)	648, 2780, 4146
EcoO65I	GGTNACC	1 cut(s)	3635
EcoRI	GAATTC	2 cut(s)	1033, 1234
EcoRII	CCWGG	5 cut(s)	365, 543, 1183, 2599, 3769
EcoRV	GATATC	3 cut(s)	2081, 2460, 4249
EcoT14I	CCWWGG	5 cut(s)	32, 1299, 1326, 2001, 3019
EcoT22I	ATGCAT	2 cut(s)	1959, 4760
EcoT38I	GRGCYC	2 cut(s)	652, 1931
ErhI	CCWWGG	5 cut(s)	32, 1299, 1326, 2001, 3019
Esp3I	CGTCTC	2 cut(s)	716, 4201
FalI	AAGNNNNNCTT	4 cut(s)	785, 817, 3928, 3960
FaqI	GGGAC	5 cut(s)	371, 845, 1009, 1483, 2996
FauI	CCCGC	2 cut(s)	300, 2504
FauNDI	CATATG	2 cut(s)	3066, 3483
FbaI	TGATCA	1 cut(s)	1702
FblI	GTMKAC	2 cut(s)	2215, 2475
Fnu4HI	GCNGC	9 cut(s)	203, 296, 380, 433, 2949, 2973, 2976, 3993, 4765
FriOI	GRGCYC	2 cut(s)	652, 1931
Fsp4HI	GCNGC	9 cut(s)	203, 296, 380, 433, 2949, 2973, 2976, 3993, 4765
GlaI	GCGC	6 cut(s)	383, 419, 436, 577, 2743, 4523
GluI	GCNGC	9 cut(s)	203, 296, 380, 433, 2949, 2973, 2976, 3993, 4765
GsaI	CCCAGC	3 cut(s)	145, 3582, 3746
GsuI	CTGGAG	1 cut(s)	3435
HaeII	RGCGCY	2 cut(s)	438, 2745
HaeIII	GGCC	8 cut(s)	316, 650, 978, 1196, 1400, 1673, 1901, 4147
HgaI	GACGC	1 cut(s)	4183
HhaI	GCGC	6 cut(s)	384, 420, 437, 578, 2744, 4524
Hin1I	GRCGYC	1 cut(s)	4194
Hin6I	GCGC	6 cut(s)	382, 418, 435, 576, 2742, 4522
HinP1I	GCGC	6 cut(s)	382, 418, 435, 576, 2742, 4522
HincII	GTYRAC	3 cut(s)	2044, 4096, 4363
HindII	GTYRAC	3 cut(s)	2044, 4096, 4363
HindIII	AAGCTT	1 cut(s)	2663
HphI	GGTGA	9 cut(s)	14, 77, 1101, 1523, 2700, 3137, 3239, 3568, 3629
Hpy166II	GTNNAC	7 cut(s)	1483, 2044, 2216, 2476, 4096, 4363, 4477
Hpy8I	GTNNAC	7 cut(s)	1483, 2044, 2216, 2476, 4096, 4363, 4477
Hpy99I	CGWCG	5 cut(s)	477, 501, 523, 526, 572
HpyCH4IV	ACGT	7 cut(s)	319, 524, 1362, 1582, 2218, 3477, 3979
HpySE526I	ACGT	7 cut(s)	319, 524, 1362, 1582, 2218, 3477, 3979
Hsp92I	GRCGYC	1 cut(s)	4194
HspAI	GCGC	6 cut(s)	382, 418, 435, 576, 2742, 4522
Kpn2I	TCCGGA	2 cut(s)	346, 424
KroI	GCCGGC	1 cut(s)	4190
KroNI	GCCGGC	1 cut(s)	4192
Ksp22I	TGATCA	1 cut(s)	1702
LmnI	GCTCC	8 cut(s)	46, 159, 586, 872, 2091, 2207, 3241, 4606
Lsp1109I	GCAGC	5 cut(s)	2935, 2959, 2987, 3979, 4751
MaeII	ACGT	7 cut(s)	319, 524, 1362, 1582, 2218, 3477, 3979
MbiI	CCGCTC	2 cut(s)	159, 2202
MfeI	CAATTG	2 cut(s)	3363, 3987
MflI	RGATCY	5 cut(s)	2333, 2360, 2539, 4079, 4267
MhlI	GDGCHC	4 cut(s)	652, 696, 1931, 3213
MlsI	TGGCCA	1 cut(s)	1400
MluNI	TGGCCA	1 cut(s)	1400
MmeI	TCCRAC	5 cut(s)	333, 2365, 2487, 2861, 4107
Mox20I	TGGCCA	1 cut(s)	1400
Mph1103I	ATGCAT	2 cut(s)	1959, 4760
MroI	TCCGGA	2 cut(s)	346, 424
MroNI	GCCGGC	1 cut(s)	4190
MroXI	GAANNNNTTC	3 cut(s)	2124, 3587, 4572
MscI	TGGCCA	1 cut(s)	1400
MslI	CAYNNNNRTG	4 cut(s)	1320, 2829, 3476, 3852
Msp20I	TGGCCA	1 cut(s)	1400
MspA1I	CMGCKG	2 cut(s)	3578, 3742
MspCI	CTTAAG	1 cut(s)	4661
MunI	CAATTG	2 cut(s)	3363, 3987
Mva1269I	GAATGC	1 cut(s)	4078
MvaI	CCWGG	5 cut(s)	367, 545, 1185, 2601, 3771
MvnI	CGCG	6 cut(s)	382, 384, 396, 420, 531, 578
NaeI	GCCGGC	1 cut(s)	4192
NciI	CCSGG	5 cut(s)	356, 829, 830, 1467, 4204
NdeI	CATATG	2 cut(s)	3066, 3483
NgoMIV	GCCGGC	1 cut(s)	4190
NlaIV	GGNNCC	8 cut(s)	359, 650, 742, 868, 1339, 2541, 4081, 4148
NmuCI	GTSAC	7 cut(s)	1107, 1255, 1420, 2013, 2324, 3635, 3646
NruI	TCGCGA	1 cut(s)	531
NsiI	ATGCAT	2 cut(s)	1959, 4760
NspI	RCATGY	2 cut(s)	1556, 4758
NspV	TTCGAA	2 cut(s)	681, 1166
OliI	CACNNNNGTG	1 cut(s)	3476
PaeR7I	CTCGAG	2 cut(s)	335, 502
PagI	TCATGA	1 cut(s)	3175
PaqCI	CACCTGC	1 cut(s)	1123
PcsI	WCGNNNNNNNCGW	3 cut(s)	472, 678, 1028
PctI	GAATGC	1 cut(s)	4078
PdiI	GCCGGC	1 cut(s)	4192
PdmI	GAANNNNTTC	3 cut(s)	2124, 3587, 4572
PfoI	TCCNGGA	3 cut(s)	365, 543, 4202
PkrI	GCNGC	9 cut(s)	204, 297, 381, 434, 2950, 2974, 2977, 3994, 4766
PpuMI	RGGWCCY	1 cut(s)	2780
PshBI	ATTAAT	2 cut(s)	1695, 3282
Psp124BI	GAGCTC	1 cut(s)	1931
Psp1406I	AACGTT	2 cut(s)	1362, 1582
Psp5II	RGGWCCY	1 cut(s)	2780
Psp6I	CCWGG	5 cut(s)	365, 543, 1183, 2599, 3769
PspEI	GGTNACC	1 cut(s)	3635
PspFI	CCCAGC	3 cut(s)	141, 3578, 3742
PspGI	CCWGG	5 cut(s)	365, 543, 1183, 2599, 3769
PspN4I	GGNNCC	8 cut(s)	359, 650, 742, 868, 1339, 2541, 4081, 4148
PspOMI	GGGCCC	1 cut(s)	648
PspPPI	RGGWCCY	1 cut(s)	2780
PspXI	VCTCGAGB	2 cut(s)	335, 502
PstI	CTGCAG	3 cut(s)	1690, 2953, 2977
PstNI	CAGNNNCTG	2 cut(s)	1502, 3044
PsuI	RGATCY	5 cut(s)	2333, 2360, 2539, 4079, 4267
PvuII	CAGCTG	1 cut(s)	3742
RruI	TCGCGA	1 cut(s)	531
RseI	CAYNNNNRTG	4 cut(s)	1320, 2829, 3476, 3852
Rsr2I	CGGWCCG	1 cut(s)	344
RsrII	CGGWCCG	1 cut(s)	344
SacI	GAGCTC	1 cut(s)	1931
SatI	GCNGC	9 cut(s)	203, 296, 380, 433, 2949, 2973, 2976, 3993, 4765
ScaI	AGTACT	3 cut(s)	766, 1477, 3889
SduI	GDGCHC	4 cut(s)	652, 696, 1931, 3213
SfcI	CTRYAG	7 cut(s)	412, 1563, 1686, 1911, 2949, 2967, 2973
Sfr274I	CTCGAG	2 cut(s)	335, 502
SfuI	TTCGAA	2 cut(s)	681, 1166
SinI	GGWCC	7 cut(s)	4, 222, 344, 358, 1009, 2780, 4355
SlaI	CTCGAG	2 cut(s)	335, 502
SmaI	CCCGGG	1 cut(s)	830
SmiMI	CAYNNNNRTG	4 cut(s)	1320, 2829, 3476, 3852
SmlI	CTYRAG	7 cut(s)	335, 502, 641, 1657, 2933, 4011, 4661
SmoI	CTYRAG	7 cut(s)	335, 502, 641, 1657, 2933, 4011, 4661
SpeI	ACTAGT	3 cut(s)	767, 998, 3464
SspI	AATATT	2 cut(s)	1645, 4709
SstI	GAGCTC	1 cut(s)	1931
StyI	CCWWGG	5 cut(s)	32, 1299, 1326, 2001, 3019
TaiI	ACGT	7 cut(s)	322, 527, 1365, 1585, 2221, 3480, 3982
TaqII	GACCGA	1 cut(s)	375
TatI	WGTACW	6 cut(s)	764, 1475, 1879, 3242, 3293, 3887
TauI	GCSGC	4 cut(s)	205, 298, 382, 435
TscAI	CASTG	8 cut(s)	1416, 1507, 1624, 2053, 2888, 3478, 4171, 4591
TseFI	GTSAC	7 cut(s)	1107, 1255, 1420, 2013, 2324, 3635, 3646
TseI	GCWGC	5 cut(s)	2948, 2972, 2975, 3992, 4764
Tsp45I	GTSAC	7 cut(s)	1107, 1255, 1420, 2013, 2324, 3635, 3646
TspGWI	ACGGA	1 cut(s)	4449
TspMI	CCCGGG	1 cut(s)	828
TspRI	CASTG	8 cut(s)	1416, 1507, 1624, 2053, 2888, 3478, 4171, 4591
Vha464I	CTTAAG	1 cut(s)	4661
VpaK11BI	GGWCC	7 cut(s)	4, 222, 344, 358, 1009, 2780, 4355
VspI	ATTAAT	2 cut(s)	1695, 3282
XagI	CCTNNNNNAGG	1 cut(s)	805
XapI	RAATTY	9 cut(s)	1033, 1141, 1234, 1666, 1759, 1942, 2343, 3548, 3583
XbaI	TCTAGA	1 cut(s)	2330
XceI	RCATGY	2 cut(s)	1556, 4758
XcmI	CCANNNNNNNNNTGG	2 cut(s)	4502, 4694
XhoI	CTCGAG	2 cut(s)	335, 502
XmaI	CCCGGG	1 cut(s)	828
XmiI	GTMKAC	2 cut(s)	2215, 2475
XmnI	GAANNNNTTC	3 cut(s)	2124, 3587, 4572
ZrmI	AGTACT	3 cut(s)	766, 1477, 3889
Zsp2I	ATGCAT	2 cut(s)	1959, 4760

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.