Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0006294

Physical Location & Seq

Genomic Coordinates Reverse (-)

19953971 .. 19956848

Gene Structure 2878 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1242600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1377 bp

ATGGCCTCCACAGCATCCACAGCCAACCCCTTCTCCGTTTCCCTCTCCTCCAGGAAAGCCTCACTCTCCAAACCCAGCAGCCCGGCCGAGGTTTCTCTCCGTGTTCGGAGCTCCAACGCTTCTTCTCTCCGGACTTCGTTCGTTTCCAATAGTTCGATTGAGTTGACTCGGGGCGCGAACTCGGCGTTGAAGTCGAGCACCGTGAGATCAAGGACGAGGATTATGGCGAGCTCGGCTCAGGTAGTGGATCAGCCATCCAGTAAAACGGGTCCTGTGGCTCCCACCGTTGTGGACGTCGATTTGGGTAATCGGAGCTACCCGATTTACATTGGATCTGGATTGCTTGATCAGCCCGAACTTCTTCAAAGGCATGTTCACGGAAAGAGGGTTCTTGTGGTCACTAACACTAAAGTTGCGCCGTTGTACTTGGATAAAGTTGTTGAGGCTTTGACAAGAGATAACCCGAATGTGTCAGTTGAGAGCGTGATTTTACCAGATGGTGAGAAGTATAAGGACATGGACACTCTTATGAAAGTGTTTGACAAGGCTATTGAGTCAAGACTGGACCGGCGATGTACATTTGTTGCCCTCGGAGGCGGCGTGATTGGTGACATGTGTGGCTATGCTGCTGCTTCTTTCCTTCGTGGTGTTAACTTCATTCAGATTCCAACAACTGTTATGGCACAGGTTGATTCTTCTGTTGGGGGCAAAACCGGTATAAACCACCCTCTTGGGAAGAACTTGATCGGTGCTTTTTACCAACCTCAGTGTGTGCTTATAGACACAGACACATTGAACACATTACCAGATAGGGAACTGGCTTCAGGGCTTGCAGAGGTCATTAAGTATGGGCTTATTAGAGATGCAGATTTCTTTGAATGGCAGGAGAGGAATATTCAGGCACTAATGGCGAGGGATCCAGCGGCAATGGCTTATGCTATAAAGCGGTCGTGTGAAAACAAGGCTGAGGTTGTGTCCTTGGATGAGAAGGAAGGTGGACTGAGAGCTACACTGAACTTGGGTCATACATTTGGTCATGCAATAGAAACTGGGCTCGGCTATGGGAACTGGCTCCATGGAGAAGCTGTTGCAGCTGGCATGGTTATGGCTGTTGACATGTCATACCGCCTTGGCTGGATTGATGATGCACTTGTGAAGCGAACTACCAACATTTTAAAACAGGCCAAGTTACCTATTGCACCTCCTGAATCTGTGACGATAGAGACATTCAGATCTGTAATGGCGGTTGATAAGAAGGTAGCTGATGGGTTACTAAGGCTCATCCTTCTGAAGGGTCCTTTGGGAAATTGTGTCTTCACCGGCGAATATGATAGAAAGGCCCTCGACGAAACACTCCACGCATTTTGCAAGTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003856 GO:0006082 GO:0008150 GO:0008152 GO:0009058 GO:0009987 GO:0016053 GO:0016829 GO:0016835 GO:0016838 GO:0019632 GO:0019752 GO:0032787 GO:0033587 GO:0043436 GO:0044237 GO:0044249 GO:0044281 GO:0044283 GO:0046394 GO:0071704 GO:0072330 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00400 ko01100 ko01110 ko01130 ko01230 map00400 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

DHQ_synthase

Protein Analysis

459

Amino Acids

49.44

Weight (kDa)

8.59

Isoelectric Point (pI)

39.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Fe-ADH_2	PF13685	112 - 267	4e-09	Iron-containing alcohol dehydrogenase
DHQ_synthase	PF01761	162 - 274	1.8e-48	3-dehydroquinate synthase N-terminal
DHQS_C	PF24621	276 - 420	8.8e-52	3-dehydroquinate synthase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006294)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66120 AT5G66120
fragaria_vesca	FvH4_1g11430
malus_domestica	MD15G1242600.v1.1
prunus_persica	Prupe.7G171600_v2.0.a1
pyrus_communis	pycom02g09850 pycom15g21380
rosa_chinensis	RchiOBHm_Chr2g0099011 RchiOBHm_Chr2g0099021
rosa_laevigata	RLG00000016840
rosa_multiflora	Rmu_co8359771.1_g000001 Rmu_sc0000577.1_g000012 Rmu_sc0009422.1_g000001
rosa_roxburghii	Rroxscaffold_2G00143490 Rroxscaffold_2G00143510
rosa_rugosa	Rorug02G0075600 Rorug02G0075700
rosa_samantha	Rh2AG125000 Rh2AG125100 Rh2BG128200 Rh2BG128300 Rh2CG129200 Rh2CG129300 Rh2DG129400 Rh2DG129500
rosa_wichuraiana	Rw2G009610 Rw2G009620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	297
AccII	CGCG	1 cut(s)	176
AccIII	TCCGGA	1 cut(s)	129
AciI	CCGC	5 cut(s)	597, 923, 946, 1126, 1244
AclWI	GGATC	4 cut(s)	255, 340, 911, 924
AcoI	YGGCCR	1 cut(s)	84
AcuI	CTGAAG	2 cut(s)	807, 1310
AcyI	GRCGYC	1 cut(s)	294
AfaI	GTAC	2 cut(s)	425, 577
AfiI	CCNNNNNNNGG	2 cut(s)	88, 1291
AflIII	ACRYGT	2 cut(s)	612, 1116
AgeI	ACCGGT	1 cut(s)	713
AgsI	TTSAA	4 cut(s)	190, 365, 796, 878
AjnI	CCWGG	1 cut(s)	50
AjuI	GAANNNNNNNTTGG	2 cut(s)	1283, 1315
AleI	CACNNNNGTG	1 cut(s)	287
AloI	GAACNNNNNNTCC	2 cut(s)	372, 404
AluBI	AGCT	7 cut(s)	111, 231, 315, 1007, 1085, 1094, 1262
AluI	AGCT	7 cut(s)	111, 231, 315, 1007, 1085, 1094, 1262
Alw21I	GWGCWC	3 cut(s)	113, 200, 233
Alw26I	GTCTC	1 cut(s)	1217
AlwI	GGATC	4 cut(s)	255, 340, 911, 924
Ama87I	CYCGRG	1 cut(s)	168
Aor13HI	TCCGGA	1 cut(s)	129
AoxI	GGCC	4 cut(s)	3, 84, 1182, 1338
ApeKI	GCWGC	4 cut(s)	78, 626, 629, 1091
AsiGI	ACCGGT	1 cut(s)	713
Asp700I	GAANNNNTTC	1 cut(s)	360
AspLEI	GCGC	2 cut(s)	176, 418
AspS9I	GGNCC	4 cut(s)	269, 565, 1295, 1339
AsuC2I	CCSGG	1 cut(s)	83
AsuHPI	GGTGA	3 cut(s)	512, 620, 1309
AvaI	CYCGRG	1 cut(s)	168
AvaII	GGWCC	3 cut(s)	269, 565, 1295
BamHI	GGATCC	1 cut(s)	916
BanII	GRGCYC	3 cut(s)	113, 233, 1056
BbsI	GAAGAC	1 cut(s)	1306
Bbv12I	GWGCWC	3 cut(s)	113, 200, 233
BbvCI	CCTCAGC	1 cut(s)	966
BbvI	GCAGC	4 cut(s)	90, 613, 616, 1103
BccI	CCATC	3 cut(s)	262, 491, 1259
BceAI	ACGGC	1 cut(s)	403
BciT130I	CCWGG	1 cut(s)	52
BclI	TGATCA	1 cut(s)	346
BcnI	CCSGG	1 cut(s)	83
BcoDI	GTCTC	1 cut(s)	1217
BglII	AGATCT	1 cut(s)	1232
BisI	GCNGC	6 cut(s)	79, 598, 627, 630, 924, 1092
BlsI	GCNGC	6 cut(s)	80, 599, 628, 631, 925, 1093
Bme1390I	CCNGG	2 cut(s)	52, 83
Bme18I	GGWCC	3 cut(s)	269, 565, 1295
BmeT110I	CYCGRG	1 cut(s)	168
BmgT120I	GGNCC	4 cut(s)	269, 565, 1295, 1339
BmiI	GGNNCC	5 cut(s)	270, 279, 918, 1073, 1296
BmrFI	CCNGG	2 cut(s)	52, 83
BmrI	ACTGGG	1 cut(s)	1059
BmsI	GCATC	3 cut(s)	23, 853, 1135
BmuI	ACTGGG	1 cut(s)	1059
BpiI	GAAGAC	1 cut(s)	1306
BplI	GAGNNNNNCTC	2 cut(s)	220, 252
BpmI	CTGGAG	1 cut(s)	34
Bpu10I	CCTNAGC	2 cut(s)	237, 966
BpuMI	CCSGG	1 cut(s)	83
BsaHI	GRCGYC	1 cut(s)	294
BsaJI	CCNNGG	5 cut(s)	87, 589, 978, 1075, 1129
BsaWI	WCCGGW	2 cut(s)	129, 713
BsaXI	ACNNNNNCTCC	6 cut(s)	17, 47, 585, 615, 1071, 1101
Bsc4I	CCNNNNNNNGG	2 cut(s)	88, 1291
Bse118I	RCCGGY	3 cut(s)	567, 713, 1319
Bse1I	ACTGG	5 cut(s)	258, 567, 822, 1054, 1073
Bse3DI	GCAATG	1 cut(s)	933
BseAI	TCCGGA	1 cut(s)	129
BseBI	CCWGG	1 cut(s)	52
BseDI	CCNNGG	5 cut(s)	87, 589, 978, 1075, 1129
BseGI	GGATG	4 cut(s)	14, 254, 988, 1281
BseLI	CCNNNNNNNGG	2 cut(s)	88, 1291
BseMI	GCAATG	1 cut(s)	933
BseMII	CTCAG	4 cut(s)	251, 779, 957, 992
BseNI	ACTGG	5 cut(s)	258, 567, 822, 1054, 1073
BseRI	GAGGAG	1 cut(s)	37
BseX3I	CGGCCG	1 cut(s)	84
BseXI	GCAGC	4 cut(s)	90, 613, 616, 1103
BseYI	CCCAGC	1 cut(s)	74
Bsh1236I	CGCG	1 cut(s)	176
Bsh1285I	CGRYCG	2 cut(s)	87, 950
BshFI	GGCC	4 cut(s)	5, 86, 1184, 1340
BshTI	ACCGGT	1 cut(s)	713
BsiEI	CGRYCG	2 cut(s)	87, 950
BsiHKAI	GWGCWC	3 cut(s)	113, 200, 233
BsiHKCI	CYCGRG	1 cut(s)	168
BsiSI	CCGG	5 cut(s)	83, 130, 568, 714, 1320
BslI	CCNNNNNNNGG	2 cut(s)	88, 1291
BsmAI	GTCTC	1 cut(s)	1217
BsnI	GGCC	4 cut(s)	5, 86, 1184, 1340
BsoBI	CYCGRG	1 cut(s)	168
Bsp1286I	GDGCHC	4 cut(s)	113, 200, 233, 1056
Bsp13I	TCCGGA	1 cut(s)	129
Bsp1407I	TGTACA	1 cut(s)	575
Bsp143I	GATC	7 cut(s)	206, 247, 332, 346, 744, 916, 1232
Bsp19I	CCATGG	1 cut(s)	1075
BspACI	CCGC	5 cut(s)	597, 923, 946, 1126, 1244
BspANI	GGCC	4 cut(s)	5, 86, 1184, 1340
BspCNI	CTCAG	4 cut(s)	250, 778, 958, 993
BspEI	TCCGGA	1 cut(s)	129
BspFNI	CGCG	1 cut(s)	176
BspLI	GGNNCC	5 cut(s)	270, 279, 918, 1073, 1296
BspPI	GGATC	4 cut(s)	255, 340, 911, 924
BsrDI	GCAATG	1 cut(s)	933
BsrFI	RCCGGY	3 cut(s)	567, 713, 1319
BsrGI	TGTACA	1 cut(s)	575
BsrI	ACTGG	5 cut(s)	258, 567, 822, 1054, 1073
BssAI	RCCGGY	3 cut(s)	567, 713, 1319
BssECI	CCNNGG	5 cut(s)	87, 589, 978, 1075, 1129
BssMI	GATC	7 cut(s)	206, 247, 332, 346, 744, 916, 1232
BssNI	GRCGYC	1 cut(s)	294
BssT1I	CCWWGG	3 cut(s)	978, 1075, 1129
Bst2UI	CCWGG	1 cut(s)	52
Bst4CI	ACNGT	3 cut(s)	202, 286, 676
BstACI	GRCGYC	1 cut(s)	294
BstAUI	TGTACA	1 cut(s)	575
BstC8I	GCNNGC	3 cut(s)	229, 831, 1096
BstDEI	CTNAG	5 cut(s)	237, 765, 966, 1001, 1274
BstDSI	CCRYGG	1 cut(s)	1075
BstENI	CCTNNNNNAGG	1 cut(s)	1289
BstF5I	GGATG	4 cut(s)	14, 254, 988, 1281
BstFNI	CGCG	1 cut(s)	176
BstHHI	GCGC	2 cut(s)	176, 418
BstKTI	GATC	7 cut(s)	209, 250, 335, 349, 747, 919, 1235
BstMAI	GTCTC	1 cut(s)	1217
BstMBI	GATC	7 cut(s)	206, 247, 332, 346, 744, 916, 1232
BstMCI	CGRYCG	2 cut(s)	87, 950
BstMWI	GCNNNNNNNGC	8 cut(s)	11, 20, 182, 233, 349, 908, 929, 1091
BstNI	CCWGG	1 cut(s)	52
BstNSI	RCATGY	3 cut(s)	374, 616, 1120
BstSCI	CCNGG	2 cut(s)	50, 81
BstUI	CGCG	1 cut(s)	176
BstV1I	GCAGC	4 cut(s)	90, 613, 616, 1103
BstV2I	GAAGAC	1 cut(s)	1306
BstX2I	RGATCY	3 cut(s)	332, 916, 1232
BstXI	CCANNNNNNTGG	2 cut(s)	289, 731
BstYI	RGATCY	3 cut(s)	332, 916, 1232
BstZI	CGGCCG	1 cut(s)	84
BsuRI	GGCC	4 cut(s)	5, 86, 1184, 1340
BtgI	CCRYGG	1 cut(s)	1075
BtgZI	GCGATG	1 cut(s)	586
BtsCI	GGATG	4 cut(s)	14, 254, 988, 1281
BtsIMutI	CAGTG	2 cut(s)	773, 1010
Cac8I	GCNNGC	3 cut(s)	229, 831, 1096
CfoI	GCGC	2 cut(s)	176, 418
Cfr10I	RCCGGY	3 cut(s)	567, 713, 1319
Cfr13I	GGNCC	4 cut(s)	269, 565, 1295, 1339
Csp6I	GTAC	2 cut(s)	424, 576
CspAI	ACCGGT	1 cut(s)	713
CspCI	CAANNNNNGTGG	1 cut(s)	1346
CviAII	CATG	7 cut(s)	371, 517, 613, 1037, 1076, 1099, 1117
CviQI	GTAC	2 cut(s)	424, 576
DdeI	CTNAG	5 cut(s)	237, 765, 966, 1001, 1274
DpnI	GATC	7 cut(s)	208, 249, 334, 348, 746, 918, 1234
DpnII	GATC	7 cut(s)	206, 247, 332, 346, 744, 916, 1232
DraI	TTTAAA	1 cut(s)	1176
EaeI	YGGCCR	1 cut(s)	84
EagI	CGGCCG	1 cut(s)	84
Ecl136II	GAGCTC	2 cut(s)	111, 231
EclXI	CGGCCG	1 cut(s)	84
Eco130I	CCWWGG	3 cut(s)	978, 1075, 1129
Eco24I	GRGCYC	3 cut(s)	113, 233, 1056
Eco47I	GGWCC	3 cut(s)	269, 565, 1295
Eco52I	CGGCCG	1 cut(s)	84
Eco53kI	GAGCTC	2 cut(s)	111, 231
Eco57I	CTGAAG	2 cut(s)	807, 1310
Eco88I	CYCGRG	1 cut(s)	168
EcoICRI	GAGCTC	2 cut(s)	111, 231
EcoNI	CCTNNNNNAGG	1 cut(s)	1289
EcoO109I	RGGNCCY	3 cut(s)	269, 1295, 1339
EcoRII	CCWGG	1 cut(s)	50
EcoT14I	CCWWGG	3 cut(s)	978, 1075, 1129
EcoT38I	GRGCYC	3 cut(s)	113, 233, 1056
ErhI	CCWWGG	3 cut(s)	978, 1075, 1129
FaeI	CATG	7 cut(s)	374, 520, 616, 1040, 1079, 1102, 1120
FatI	CATG	7 cut(s)	370, 516, 612, 1036, 1075, 1098, 1116
FbaI	TGATCA	1 cut(s)	346
Fnu4HI	GCNGC	6 cut(s)	79, 598, 627, 630, 924, 1092
FokI	GGATG	3 cut(s)	241, 995, 1268
FriOI	GRGCYC	3 cut(s)	113, 233, 1056
Fsp4HI	GCNGC	6 cut(s)	79, 598, 627, 630, 924, 1092
GlaI	GCGC	2 cut(s)	175, 417
GluI	GCNGC	6 cut(s)	79, 598, 627, 630, 924, 1092
GsaI	CCCAGC	1 cut(s)	78
GsuI	CTGGAG	1 cut(s)	34
HaeIII	GGCC	4 cut(s)	5, 86, 1184, 1340
HapII	CCGG	5 cut(s)	83, 130, 568, 714, 1320
HhaI	GCGC	2 cut(s)	176, 418
Hin1I	GRCGYC	1 cut(s)	294
Hin1II	CATG	7 cut(s)	374, 520, 616, 1040, 1079, 1102, 1120
Hin6I	GCGC	2 cut(s)	174, 416
HinP1I	GCGC	2 cut(s)	174, 416
HincII	GTYRAC	3 cut(s)	165, 652, 1114
HindII	GTYRAC	3 cut(s)	165, 652, 1114
HinfI	GANTC	5 cut(s)	166, 554, 664, 692, 1208
HpaI	GTTAAC	1 cut(s)	652
HpaII	CCGG	5 cut(s)	83, 130, 568, 714, 1320
HphI	GGTGA	3 cut(s)	512, 620, 1309
Hpy166II	GTNNAC	6 cut(s)	165, 292, 376, 652, 998, 1114
Hpy188I	TCNGA	6 cut(s)	108, 312, 593, 663, 1232, 1290
Hpy188III	TCNNGA	5 cut(s)	130, 336, 558, 1205, 1374
Hpy8I	GTNNAC	6 cut(s)	165, 292, 376, 652, 998, 1114
Hpy99I	CGWCG	2 cut(s)	299, 1349
HpyAV	CCTTC	7 cut(s)	40, 650, 982, 986, 1249, 1285, 1295
HpyCH4III	ACNGT	3 cut(s)	202, 286, 676
HpyCH4IV	ACGT	1 cut(s)	294
HpyCH4V	TGCA	7 cut(s)	833, 866, 1040, 1091, 1148, 1199, 1368
HpyF10VI	GCNNNNNNNGC	8 cut(s)	11, 20, 182, 233, 349, 908, 929, 1091
HpyF3I	CTNAG	5 cut(s)	237, 765, 966, 1001, 1274
HpySE526I	ACGT	1 cut(s)	294
Hsp92I	GRCGYC	1 cut(s)	294
Hsp92II	CATG	7 cut(s)	374, 520, 616, 1040, 1079, 1102, 1120
HspAI	GCGC	2 cut(s)	174, 416
Kpn2I	TCCGGA	1 cut(s)	129
Ksp22I	TGATCA	1 cut(s)	346
KspAI	GTTAAC	1 cut(s)	652
Kzo9I	GATC	7 cut(s)	206, 247, 332, 346, 744, 916, 1232
LmnI	GCTCC	5 cut(s)	108, 116, 283, 312, 1077
Lsp1109I	GCAGC	4 cut(s)	90, 613, 616, 1103
LweI	GCATC	3 cut(s)	23, 853, 1135
MaeII	ACGT	1 cut(s)	294
MaeIII	GTNAC	5 cut(s)	397, 608, 1188, 1213, 1269
MalI	GATC	7 cut(s)	208, 249, 334, 348, 746, 918, 1234
MboI	GATC	7 cut(s)	206, 247, 332, 346, 744, 916, 1232
MboII	GAAGA	5 cut(s)	114, 353, 687, 748, 1306
MflI	RGATCY	3 cut(s)	332, 916, 1232
MhlI	GDGCHC	4 cut(s)	113, 200, 233, 1056
MluCI	AATT	1 cut(s)	1306
MlyI	GAGTC	2 cut(s)	160, 563
MmeI	TCCRAC	2 cut(s)	138, 692
MroI	TCCGGA	1 cut(s)	129
MroXI	GAANNNNTTC	1 cut(s)	360
MseI	TTAA	3 cut(s)	651, 843, 1175
MslI	CAYNNNNRTG	3 cut(s)	287, 527, 1103
MspA1I	CMGCKG	2 cut(s)	923, 1094
MspI	CCGG	5 cut(s)	83, 130, 568, 714, 1320
MspR9I	CCNGG	2 cut(s)	52, 83
MvaI	CCWGG	1 cut(s)	52
MvnI	CGCG	1 cut(s)	176
MwoI	GCNNNNNNNGC	8 cut(s)	11, 20, 182, 233, 349, 908, 929, 1091
NciI	CCSGG	1 cut(s)	83
NcoI	CCATGG	1 cut(s)	1075
NdeII	GATC	7 cut(s)	206, 247, 332, 346, 744, 916, 1232
NlaIII	CATG	7 cut(s)	374, 520, 616, 1040, 1079, 1102, 1120
NlaIV	GGNNCC	5 cut(s)	270, 279, 918, 1073, 1296
NmeAIII	GCCGAG	4 cut(s)	112, 161, 212, 1035
NmuCI	GTSAC	3 cut(s)	397, 608, 1213
NspI	RCATGY	3 cut(s)	374, 616, 1120
OliI	CACNNNNGTG	1 cut(s)	287
PciI	ACATGT	2 cut(s)	612, 1116
PcsI	WCGNNNNNNNCGW	1 cut(s)	597
PdmI	GAANNNNTTC	1 cut(s)	360
PfeI	GAWTC	3 cut(s)	664, 692, 1208
PfoI	TCCNGGA	1 cut(s)	50
PinAI	ACCGGT	1 cut(s)	713
PkrI	GCNGC	6 cut(s)	80, 599, 628, 631, 925, 1093
PleI	GAGTC	2 cut(s)	160, 562
PpsI	GAGTC	2 cut(s)	160, 562
PpuMI	RGGWCCY	2 cut(s)	269, 1295
PscI	ACATGT	2 cut(s)	612, 1116
Psp124BI	GAGCTC	2 cut(s)	113, 233
Psp5II	RGGWCCY	2 cut(s)	269, 1295
Psp6I	CCWGG	1 cut(s)	50
PspFI	CCCAGC	1 cut(s)	74
PspGI	CCWGG	1 cut(s)	50
PspN4I	GGNNCC	5 cut(s)	270, 279, 918, 1073, 1296
PspPI	GGNCC	4 cut(s)	269, 565, 1295, 1339
PspPPI	RGGWCCY	2 cut(s)	269, 1295
PsuI	RGATCY	3 cut(s)	332, 916, 1232
PvuII	CAGCTG	1 cut(s)	1094
RsaI	GTAC	2 cut(s)	425, 577
RsaNI	GTAC	2 cut(s)	424, 576
RseI	CAYNNNNRTG	3 cut(s)	287, 527, 1103
SacI	GAGCTC	2 cut(s)	113, 233
SaqAI	TTAA	3 cut(s)	651, 843, 1175
SatI	GCNGC	6 cut(s)	79, 598, 627, 630, 924, 1092
Sau3AI	GATC	7 cut(s)	206, 247, 332, 346, 744, 916, 1232
Sau96I	GGNCC	4 cut(s)	269, 565, 1295, 1339
SchI	GAGTC	2 cut(s)	160, 563
ScrFI	CCNGG	2 cut(s)	52, 83
SduI	GDGCHC	4 cut(s)	113, 200, 233, 1056
SfaNI	GCATC	3 cut(s)	23, 853, 1135
SgrAI	CRCCGGYG	1 cut(s)	1319
SinI	GGWCC	3 cut(s)	269, 565, 1295
SmiMI	CAYNNNNRTG	3 cut(s)	287, 527, 1103
Sse9I	AATT	1 cut(s)	1306
SsiI	CCGC	5 cut(s)	597, 923, 946, 1126, 1244
SspI	AATATT	1 cut(s)	895
SstI	GAGCTC	2 cut(s)	113, 233
StyD4I	CCNGG	2 cut(s)	50, 81
StyI	CCWWGG	3 cut(s)	978, 1075, 1129
TaaI	ACNGT	3 cut(s)	202, 286, 676
TaiI	ACGT	1 cut(s)	297
TaqI	TCGA	4 cut(s)	155, 194, 297, 1344
TasI	AATT	1 cut(s)	1306
TatI	WGTACW	2 cut(s)	423, 575
TauI	GCSGC	2 cut(s)	600, 926
TfiI	GAWTC	3 cut(s)	664, 692, 1208
Tru1I	TTAA	3 cut(s)	651, 843, 1175
Tru9I	TTAA	3 cut(s)	651, 843, 1175
TscAI	CASTG	2 cut(s)	773, 1017
TseFI	GTSAC	3 cut(s)	397, 608, 1213
TseI	GCWGC	4 cut(s)	78, 626, 629, 1091
Tsp45I	GTSAC	3 cut(s)	397, 608, 1213
TspDTI	ATGAA	2 cut(s)	545, 646
TspGWI	ACGGA	3 cut(s)	25, 89, 393
TspRI	CASTG	2 cut(s)	773, 1017
VpaK11BI	GGWCC	3 cut(s)	269, 565, 1295
XagI	CCTNNNNNAGG	1 cut(s)	1289
XceI	RCATGY	3 cut(s)	374, 616, 1120
XmnI	GAANNNNTTC	1 cut(s)	360
ZraI	GACGTC	1 cut(s)	295

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.